pycom04g16510

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
OG0008146
Physical Location & Seq
Reverse (-)
19203138 .. 19205324
2187 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom04g16510.1

Sequence Viewer

Length: 2187 bp
ATGTTCATAAAGCTCCATCCTTTAACATTTTCCAAGAGAATCCCCACCTGGGTCTGCTCGAATGCATATTTTTCTGCATCTTCCTGCGCAAAAAAAATCGAAATTTTCTCTGGAAACAATCAGGACCCAGAATATTCATCCGAATTTGAACAAAATATCCAGTCTTTGAGGAATAAGCTTGTCCCGGATAACTTAATCCGGGTTCTGGATAACACTGATGATTTGAGCTCAGCAGTGAAGGTGTTCAAGTGGGCTTCCCTGCAAAAACGGTTTAATCACACCGCCGATACGTATTTTCGGATTGTTTTGAAACTGGGTTTGGCTGGAAATGTTGAGGAGATGGAGGGGTTTTGTCAAAATATGGTGAAAGATCGGTGTCCGGGTGCTGAAGAGGCGCTTTTGGCCCTGATTGATATGTTTGTCAGTCATTGCAGGTTAAGTGAGGCAATTAGGGTGCTTGTGAATTTGAAAGCAGGTGGCTTTAGGCCTTCAATACAGATATTTAATGGTCTGTTGGGTGCTCTTGTGAAAGATAAGAGAGATTTTCGAGATGTCTTATTTTTGTATAAGGAGATTGTGACGGCAGGAATCGTGCCAACGGTTGATACTTTGAATTATTTGTTAGAGGCATTGGTGGAGGCCAACCGCATTGAGTCTGCTCTGGATCAGTATAGAAGAATGAAGAAGAAAAGGTGTAGTCCTAATAGTAGGAGTTTTGAGATTCTTATAAAAGGCCTTATTGCGAAAGACCGAGTGGATGAGGCTGTTATTGTTTTGAATGAAATGGTTGATCTTGGTTGTCAGCCTGATTTGAGTTTTTATTCCTTCATTATACCTTTGTTTTGTCAGGAAAATAAACCGGATGAGGGAATTAGATTGTTCGAAATGATGAGAGCTTCAAATTTTACACCGGATTCATTGGTTTATGAGGTTCTGTTGCAGTCTTTATGCAAGAACCTTAGATTAGATGATGCAATAAAGGTTTTAGAAGAAATGATGGAAACTGGATTGACACCACCAAATAATGTCTTTGTGGATGTAGTAAATGTGTTTTGTAAATTAGGGAAGGTAGACAACGCGATGAAATTCTTGGAGGATAAGAAAATCATGGAAACTTCTGCCTGCAATGTCCTGCTTGAAGGTTTCTGCAGTGTTGGTAAATTTCTTGTGGCGGAAGATCTACTAGTGGAAATGTCCGAAAGGAATGTGACTAATTGTAATTCTTGGAATATTGTTATCAGATGGCTCAGCGAGAACGGAAGGATTAGGGAAGTGATGGAACTTCTAGGTAGAATGGTGGTTTCTTCTTCTCTTCCAGACTCTGACACATACTCAGCTCTGGTCGTTTGCCACTGCAAAATGAGCAACTATAGAAATGCTCTGGATATATTTCATCAGACTCGTGCCAAAAGTTGGGTTTTGGATCGTACATCTTACTCTGAGCTTGTCAAAGGCCTTTGCCTAGAAGAAATGACTCATGAGGCTACTGAAGTGTTCTGTTACATGTCTAGTAATAGATGTTTCATCGAGCCTTCCTCATTCAATATGTTGATCAAGGGTTTGTGTGAGACGGGAAAGGTTGAAGAAGCAATAAGGATGCAACAATTGGCCTATTATGCCGGTACTTCTTCTACCAGTTCAACTTACTCAACTATTATGCTTGGATTGTCAAAATTAGACAAGGTAAAAGATCTGTTGGTAGTTTTCTCAAAAATGCTGGTGGAAGGTTGCAATCTTGATTTGGATGCCTTCTGCGTGCTCATACAAACCATGAGCTTGCAGAATCGAGTAAAAGAATGCGTATTGCTTTTTGATATGATGGTCGATGGGGGTCTTATACCTGATTCAGAGAGACTATTAAATCTACTCTCCTGCATAGCCAACCATTCTCAGTTGCACATGATTTCAGGTTCAATAAATAAACTTATTTCTGATAGTGAAGTTCTAAATTCAGCAATTTACAATGTACTGATTAACGGCTTCTGGAAAGAGGGTTATAAATGCGAGGCCTGTCAATTTTTGGATATAATGTTGGAAAGGGATTGGGTCCCAGATGCTAGGACTCATGGATTGCTGATGGGGTCTGTTGTTGGCAAAGTAGATAGGAACAGGTTGGACTATGATAATTGCACTGTCCAAGATAGTGTTAGCAACATCCTTGCAGAGGGATTAGATGATGTAACATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

729

Amino Acids

82.26

Weight (kDa)

5.21

Isoelectric Point (pI)

33.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 135 - 226 3e-06 Fungal tetratrico peptide repeats
PPR_2 PF13041 199 - 246 1.6e-10 PPR repeat family
PPR_long PF17177 215 - 314 4.6e-06 Pentacotripeptide-repeat region of PRORP
PPR_long PF17177 251 - 367 3.2e-06 Pentacotripeptide-repeat region of PRORP
PPR_2 PF13041 269 - 318 4.6e-08 PPR repeat family
PPR_1 PF12854 301 - 332 1.8e-06 PPR repeat
PPR_2 PF13041 408 - 453 2.1e-07 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 728, 1998
AarI CACCTGC 1 cut(s) 464
Acc16I TGCGCA 1 cut(s) 88
Acc36I ACCTGC 2 cut(s) 423, 464
AccB7I CCANNNNNTGG 1 cut(s) 1413
AccI GTMKAC 1 cut(s) 1071
AccII CGCG 1 cut(s) 1079
AciI CCGC 3 cut(s) 282, 646, 1172
AclWI GGATC 2 cut(s) 672, 1431
AcsI RAATTY 7 cut(s) 102, 143, 463, 901, 1085, 1160, 1948
AcuI CTGAAG 2 cut(s) 408, 1509
AfaI GTAC 3 cut(s) 1429, 1624, 1968
AfiI CCNNNNNNNGG 5 cut(s) 49, 205, 866, 1413, 2164
AflIII ACRYGT 1 cut(s) 1503
AhlI ACTAGT 1 cut(s) 1183
AjnI CCWGG 1 cut(s) 47
AjuI GAANNNNNNNTTGG 2 cut(s) 302, 334
AloI GAACNNNNNNTCC 2 cut(s) 141, 173
AluBI AGCT 7 cut(s) 13, 178, 228, 896, 1337, 1444, 1776
AluI AGCT 7 cut(s) 13, 178, 228, 896, 1337, 1444, 1776
Alw21I GWGCWC 3 cut(s) 230, 523, 1761
Alw26I GTCTC 2 cut(s) 1562, 1846
AlwI GGATC 2 cut(s) 672, 1431
AlwNI CAGNNNCTG 1 cut(s) 1322
AoxI GGCC 7 cut(s) 402, 485, 639, 733, 1453, 1608, 2007
ApoI RAATTY 7 cut(s) 102, 143, 463, 901, 1085, 1160, 1948
Asp700I GAANNNNTTC 1 cut(s) 242
AspLEI GCGC 2 cut(s) 89, 397
AspS9I GGNCC 3 cut(s) 124, 403, 2047
AsuC2I CCSGG 3 cut(s) 185, 200, 381
AsuHPI GGTGA 1 cut(s) 376
AsuII TTCGAA 1 cut(s) 882
AvaII GGWCC 2 cut(s) 124, 2047
BanII GRGCYC 1 cut(s) 230
BauI CACGAG 1 cut(s) 1401
Bbv12I GWGCWC 3 cut(s) 230, 523, 1761
BccI CCATC 8 cut(s) 24, 334, 991, 1236, 1270, 1813, 1820, 2071
BceAI ACGGC 2 cut(s) 597, 1993
BciT130I CCWGG 1 cut(s) 49
BclI TGATCA 1 cut(s) 1551
BcnI CCSGG 3 cut(s) 185, 200, 381
BcoDI GTCTC 2 cut(s) 1562, 1846
BcuI ACTAGT 1 cut(s) 1183
BfaI CTAG 5 cut(s) 1184, 1286, 1463, 1509, 2058
BfmI CTRYAG 2 cut(s) 1147, 1369
BfoI RGCGCY 1 cut(s) 398
BfuAI ACCTGC 2 cut(s) 423, 464
BglII AGATCT 2 cut(s) 1177, 1690
BlpI GCTNAGC 2 cut(s) 229, 1247
Bme1390I CCNGG 4 cut(s) 49, 185, 200, 381
Bme18I GGWCC 2 cut(s) 124, 2047
BmgT120I GGNCC 3 cut(s) 124, 403, 2047
BmiI GGNNCC 3 cut(s) 126, 2048, 2049
BmrFI CCNGG 4 cut(s) 49, 185, 200, 381
BmrI ACTGGG 1 cut(s) 323
BmsI GCATC 5 cut(s) 86, 961, 1587, 1735, 2044
BmuI ACTGGG 1 cut(s) 323
BplI GAGNNNNNCTC 2 cut(s) 1520, 1552
Bpu1102I GCTNAGC 2 cut(s) 229, 1247
Bpu14I TTCGAA 1 cut(s) 882
BpuMI CCSGG 3 cut(s) 185, 200, 381
BsaAI YACGTR 1 cut(s) 291
BsaJI CCNNGG 1 cut(s) 48
BsaWI WCCGGW 2 cut(s) 859, 910
Bsc4I CCNNNNNNNGG 5 cut(s) 49, 205, 866, 1413, 2164
Bse118I RCCGGY 1 cut(s) 1619
Bse1I ACTGG 4 cut(s) 160, 318, 1009, 1635
Bse3DI GCAATG 2 cut(s) 427, 1132
BseBI CCWGG 1 cut(s) 49
BseDI CCNNGG 1 cut(s) 48
BseGI GGATG 8 cut(s) 16, 137, 763, 868, 1042, 1602, 1750, 2154
BseLI CCNNNNNNNGG 5 cut(s) 49, 205, 866, 1413, 2164
BseMI GCAATG 2 cut(s) 427, 1132
BseMII CTCAG 5 cut(s) 243, 1261, 1347, 1431, 1904
BseNI ACTGG 4 cut(s) 160, 318, 1009, 1635
BseRI GAGGAG 1 cut(s) 350
Bsh1236I CGCG 1 cut(s) 1079
BshFI GGCC 7 cut(s) 404, 487, 641, 735, 1455, 1610, 2009
BsiHKAI GWGCWC 3 cut(s) 230, 523, 1761
BsiSI CCGG 6 cut(s) 185, 199, 380, 860, 911, 1620
BslFI GGGAC 2 cut(s) 167, 2033
BslI CCNNNNNNNGG 5 cut(s) 49, 205, 866, 1413, 2164
BsmAI GTCTC 2 cut(s) 1562, 1846
BsmBI CGTCTC 1 cut(s) 1562
BsmFI GGGAC 2 cut(s) 167, 2033
BsmI GAATGC 2 cut(s) 67, 1802
BsnI GGCC 7 cut(s) 404, 487, 641, 735, 1455, 1610, 2009
Bsp119I TTCGAA 1 cut(s) 882
Bsp1286I GDGCHC 3 cut(s) 230, 523, 1761
Bsp143I GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
Bsp1720I GCTNAGC 2 cut(s) 229, 1247
BspACI CCGC 3 cut(s) 282, 646, 1172
BspANI GGCC 7 cut(s) 404, 487, 641, 735, 1455, 1610, 2009
BspCNI CTCAG 5 cut(s) 242, 1260, 1346, 1432, 1903
BspFNI CGCG 1 cut(s) 1079
BspHI TCATGA 1 cut(s) 1477
BspLI GGNNCC 3 cut(s) 126, 2048, 2049
BspMAI CTGCAG 1 cut(s) 1151
BspMI ACCTGC 2 cut(s) 423, 464
BspPI GGATC 2 cut(s) 672, 1431
BspT104I TTCGAA 1 cut(s) 882
BsrDI GCAATG 2 cut(s) 427, 1132
BsrFI RCCGGY 1 cut(s) 1619
BsrI ACTGG 4 cut(s) 160, 318, 1009, 1635
BssAI RCCGGY 1 cut(s) 1619
BssECI CCNNGG 1 cut(s) 48
BssMI GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
BssSI CACGAG 1 cut(s) 1401
Bst2BI CACGAG 1 cut(s) 1401
Bst2UI CCWGG 1 cut(s) 49
Bst4CI ACNGT 3 cut(s) 270, 601, 2134
Bst6I CTCTTC 2 cut(s) 384, 1317
BstBAI YACGTR 1 cut(s) 291
BstBI TTCGAA 1 cut(s) 882
BstC8I GCNNGC 3 cut(s) 1123, 1757, 1778
BstDEI CTNAG 6 cut(s) 229, 959, 1247, 1333, 1440, 1890
BstENI CCTNNNNNAGG 1 cut(s) 2162
BstF5I GGATG 8 cut(s) 16, 137, 763, 868, 1042, 1602, 1750, 2154
BstFNI CGCG 1 cut(s) 1079
BstH2I RGCGCY 1 cut(s) 398
BstHHI GCGC 2 cut(s) 89, 397
BstKTI GATC 7 cut(s) 373, 667, 793, 1180, 1426, 1554, 1693
BstMAI GTCTC 2 cut(s) 1562, 1846
BstMBI GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
BstMWI GCNNNNNNNGC 4 cut(s) 392, 401, 1362, 1616
BstNI CCWGG 1 cut(s) 49
BstNSI RCATGY 1 cut(s) 1507
BstSCI CCNGG 4 cut(s) 47, 183, 198, 379
BstSFI CTRYAG 2 cut(s) 1147, 1369
BstSNI TACGTA 1 cut(s) 291
BstUI CGCG 1 cut(s) 1079
BstX2I RGATCY 2 cut(s) 1177, 1690
BstYI RGATCY 2 cut(s) 1177, 1690
BsuRI GGCC 7 cut(s) 404, 487, 641, 735, 1455, 1610, 2009
BtgZI GCGATG 1 cut(s) 1094
BtsCI GGATG 8 cut(s) 16, 137, 763, 868, 1042, 1602, 1750, 2154
BtsI GCAGTG 3 cut(s) 240, 1156, 1351
BtsIMutI CAGTG 5 cut(s) 213, 240, 1156, 1351, 2130
BveI ACCTGC 2 cut(s) 423, 464
Cac8I GCNNGC 3 cut(s) 1123, 1757, 1778
CaiI CAGNNNCTG 1 cut(s) 1322
CciI TCATGA 1 cut(s) 1477
CfoI GCGC 2 cut(s) 89, 397
Cfr10I RCCGGY 1 cut(s) 1619
Cfr13I GGNCC 3 cut(s) 124, 403, 2047
Csp6I GTAC 3 cut(s) 1428, 1623, 1967
CviAII CATG 7 cut(s) 1108, 1478, 1504, 1771, 1900, 2066, 2184
CviQI GTAC 3 cut(s) 1428, 1623, 1967
DdeI CTNAG 6 cut(s) 229, 959, 1247, 1333, 1440, 1890
DpnI GATC 7 cut(s) 372, 666, 792, 1179, 1425, 1553, 1692
DpnII GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
Eam1104I CTCTTC 2 cut(s) 384, 1317
EarI CTCTTC 2 cut(s) 384, 1317
EciI GGCGGA 1 cut(s) 1187
Ecl136II GAGCTC 1 cut(s) 228
Eco105I TACGTA 1 cut(s) 291
Eco147I AGGCCT 4 cut(s) 487, 735, 1455, 2009
Eco24I GRGCYC 1 cut(s) 230
Eco47I GGWCC 2 cut(s) 124, 2047
Eco53kI GAGCTC 1 cut(s) 228
Eco57I CTGAAG 2 cut(s) 408, 1509
EcoICRI GAGCTC 1 cut(s) 228
EcoNI CCTNNNNNAGG 1 cut(s) 2162
EcoO109I RGGNCCY 2 cut(s) 124, 2047
EcoRII CCWGG 1 cut(s) 47
EcoT22I ATGCAT 1 cut(s) 67
EcoT38I GRGCYC 1 cut(s) 230
Esp3I CGTCTC 1 cut(s) 1562
FaeI CATG 7 cut(s) 1111, 1481, 1507, 1774, 1903, 2069, 2187
FalI AAGNNNNNCTT 2 cut(s) 381, 413
FaqI GGGAC 2 cut(s) 167, 2033
FatI CATG 7 cut(s) 1107, 1477, 1503, 1770, 1899, 2065, 2183
FbaI TGATCA 1 cut(s) 1551
FblI GTMKAC 1 cut(s) 1071
FokI GGATG 8 cut(s) 3, 124, 770, 875, 1049, 1609, 1757, 2141
FriOI GRGCYC 1 cut(s) 230
FspBI CTAG 5 cut(s) 1184, 1286, 1463, 1509, 2058
FspI TGCGCA 1 cut(s) 88
GlaI GCGC 2 cut(s) 88, 396
HaeII RGCGCY 1 cut(s) 398
HaeIII GGCC 7 cut(s) 404, 487, 641, 735, 1455, 1610, 2009
HapII CCGG 6 cut(s) 185, 199, 380, 860, 911, 1620
HhaI GCGC 2 cut(s) 89, 397
Hin1II CATG 7 cut(s) 1111, 1481, 1507, 1774, 1903, 2069, 2187
Hin6I GCGC 2 cut(s) 87, 395
HinP1I GCGC 2 cut(s) 87, 395
HindIII AAGCTT 1 cut(s) 176
HpaII CCGG 6 cut(s) 185, 199, 380, 860, 911, 1620
HphI GGTGA 1 cut(s) 376
Hpy166II GTNNAC 1 cut(s) 1072
Hpy188I TCNGA 9 cut(s) 142, 300, 1198, 1241, 1324, 1398, 1441, 1849, 1933
Hpy8I GTNNAC 1 cut(s) 1072
HpyAV CCTTC 9 cut(s) 232, 498, 835, 1060, 1133, 1254, 1542, 1718, 1759
HpyCH4III ACNGT 3 cut(s) 270, 601, 2134
HpyCH4IV ACGT 1 cut(s) 290
HpyF10VI GCNNNNNNNGC 4 cut(s) 392, 401, 1362, 1616
HpyF3I CTNAG 6 cut(s) 229, 959, 1247, 1333, 1440, 1890
HpySE526I ACGT 1 cut(s) 290
Hsp92II CATG 7 cut(s) 1111, 1481, 1507, 1774, 1903, 2069, 2187
HspAI GCGC 2 cut(s) 87, 395
KflI GGGWCCC 1 cut(s) 2047
Ksp22I TGATCA 1 cut(s) 1551
Kzo9I GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
LmnI GCTCC 1 cut(s) 18
LweI GCATC 5 cut(s) 86, 961, 1587, 1735, 2044
MaeI CTAG 5 cut(s) 1184, 1286, 1463, 1509, 2058
MaeII ACGT 1 cut(s) 290
MaeIII GTNAC 4 cut(s) 577, 1207, 1499, 2179
MalI GATC 7 cut(s) 372, 666, 792, 1179, 1425, 1553, 1692
MboI GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
MfeI CAATTG 1 cut(s) 1604
MflI RGATCY 2 cut(s) 1177, 1690
MhlI GDGCHC 3 cut(s) 230, 523, 1761
MlyI GAGTC 5 cut(s) 662, 1313, 1393, 1468, 2056
MmeI TCCRAC 2 cut(s) 2013, 2094
Mph1103I ATGCAT 1 cut(s) 67
MroXI GAANNNNTTC 1 cut(s) 242
MseI TTAA 7 cut(s) 23, 194, 273, 437, 504, 1859, 1974
MspI CCGG 6 cut(s) 185, 199, 380, 860, 911, 1620
MspR9I CCNGG 4 cut(s) 49, 185, 200, 381
MunI CAATTG 1 cut(s) 1604
Mva1269I GAATGC 2 cut(s) 67, 1802
MvaI CCWGG 1 cut(s) 49
MvnI CGCG 1 cut(s) 1079
MwoI GCNNNNNNNGC 4 cut(s) 392, 401, 1362, 1616
NciI CCSGG 3 cut(s) 185, 200, 381
NdeII GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
NlaIII CATG 7 cut(s) 1111, 1481, 1507, 1774, 1903, 2069, 2187
NlaIV GGNNCC 3 cut(s) 126, 2048, 2049
NmuCI GTSAC 2 cut(s) 577, 1207
NsbI TGCGCA 1 cut(s) 88
NsiI ATGCAT 1 cut(s) 67
NspI RCATGY 1 cut(s) 1507
NspV TTCGAA 1 cut(s) 882
PagI TCATGA 1 cut(s) 1477
PaqCI CACCTGC 1 cut(s) 464
PceI AGGCCT 4 cut(s) 487, 735, 1455, 2009
PciI ACATGT 1 cut(s) 1503
PctI GAATGC 2 cut(s) 67, 1802
PdmI GAANNNNTTC 1 cut(s) 242
PfeI GAWTC 6 cut(s) 39, 588, 721, 914, 1783, 1844
PflMI CCANNNNNTGG 1 cut(s) 1413
PfoI TCCNGGA 1 cut(s) 183
PleI GAGTC 5 cut(s) 661, 1313, 1393, 1468, 2056
PpsI GAGTC 5 cut(s) 661, 1313, 1393, 1468, 2056
Ppu21I YACGTR 1 cut(s) 291
PpuMI RGGWCCY 2 cut(s) 124, 2047
PscI ACATGT 1 cut(s) 1503
PsiI TTATAA 2 cut(s) 728, 1998
Psp124BI GAGCTC 1 cut(s) 230
Psp5II RGGWCCY 2 cut(s) 124, 2047
Psp6I CCWGG 1 cut(s) 47
PspGI CCWGG 1 cut(s) 47
PspN4I GGNNCC 3 cut(s) 126, 2048, 2049
PspPI GGNCC 3 cut(s) 124, 403, 2047
PspPPI RGGWCCY 2 cut(s) 124, 2047
PstI CTGCAG 1 cut(s) 1151
PstNI CAGNNNCTG 1 cut(s) 1322
PsuI RGATCY 2 cut(s) 1177, 1690
RsaI GTAC 3 cut(s) 1429, 1624, 1968
RsaNI GTAC 3 cut(s) 1428, 1623, 1967
SacI GAGCTC 1 cut(s) 230
SaqAI TTAA 7 cut(s) 23, 194, 273, 437, 504, 1859, 1974
Sau3AI GATC 7 cut(s) 370, 664, 790, 1177, 1423, 1551, 1690
Sau96I GGNCC 3 cut(s) 124, 403, 2047
SchI GAGTC 5 cut(s) 662, 1313, 1393, 1468, 2056
ScrFI CCNGG 4 cut(s) 49, 185, 200, 381
SduI GDGCHC 3 cut(s) 230, 523, 1761
SfaNI GCATC 5 cut(s) 86, 961, 1587, 1735, 2044
SfcI CTRYAG 2 cut(s) 1147, 1369
SfuI TTCGAA 1 cut(s) 882
SinI GGWCC 2 cut(s) 124, 2047
SnaBI TACGTA 1 cut(s) 291
SpeI ACTAGT 1 cut(s) 1183
SseBI AGGCCT 4 cut(s) 487, 735, 1455, 2009
SsiI CCGC 3 cut(s) 282, 646, 1172
SspI AATATT 2 cut(s) 134, 1231
SspMI CTAG 5 cut(s) 1184, 1286, 1463, 1509, 2058
SstI GAGCTC 1 cut(s) 230
StuI AGGCCT 4 cut(s) 487, 735, 1455, 2009
StyD4I CCNGG 4 cut(s) 47, 183, 198, 379
TaaI ACNGT 3 cut(s) 270, 601, 2134
TaiI ACGT 1 cut(s) 293
TaqI TCGA 7 cut(s) 59, 99, 547, 882, 1527, 1786, 1824
TaqII GACCGA 1 cut(s) 765
TatI WGTACW 1 cut(s) 1966
TfiI GAWTC 6 cut(s) 39, 588, 721, 914, 1783, 1844
Tru1I TTAA 7 cut(s) 23, 194, 273, 437, 504, 1859, 1974
Tru9I TTAA 7 cut(s) 23, 194, 273, 437, 504, 1859, 1974
TscAI CASTG 5 cut(s) 220, 240, 1156, 1358, 2137
TseFI GTSAC 2 cut(s) 577, 1207
Tsp45I GTSAC 2 cut(s) 577, 1207
TspDTI ATGAA 8 cut(s) 126, 695, 795, 817, 906, 1097, 1382, 1513
TspGWI ACGGA 1 cut(s) 1272
TspRI CASTG 5 cut(s) 220, 240, 1156, 1358, 2137
Van91I CCANNNNNTGG 1 cut(s) 1413
VpaK11BI GGWCC 2 cut(s) 124, 2047
XagI CCTNNNNNAGG 1 cut(s) 2162
XapI RAATTY 7 cut(s) 102, 143, 463, 901, 1085, 1160, 1948
XceI RCATGY 1 cut(s) 1507
XmiI GTMKAC 1 cut(s) 1071
XmnI GAANNNNTTC 1 cut(s) 242
XspI CTAG 5 cut(s) 1184, 1286, 1463, 1509, 2058
Zsp2I ATGCAT 1 cut(s) 67
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.