Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000003

Orthogroup ID

OG0008146

Physical Location & Seq

Genomic Coordinates Reverse (-)

2107344 .. 2109519

Gene Structure 2176 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug03G0027100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1728 bp

ATGGACGAGGATGATGGTGAACATCTTATGAAGTTCTCAATAGGAACTCCGCCCGTCGATATTTATGCAGTTGCTGACTCAGGTAGCACTTTACTATGGACCCAATGCAAGCCGTGTGATGGTTGCTACAAGATGAAGCATGCCATGTTCGACCCGAAAAAGTCATCAACTTATAGGAAGGTTCCTTGTTCCACAAAGGAATGTAGTTTTCTTGAAGACAATGGATTTTGCTCATTACCCAAAATGGTTTGCACTTACTACTACGCTTATGTAGATGACTCAATCTCTAAAGGGGTATTGGCTAAAGAAACAATTATCTTGACGTCCACGTCAGGTAAGCCGGTATCCCTGAAAAATATCGTGATGGGTTGTGGGCATAACAACAGTGGTTCTTTAACTGAAAATCAAATGGGAGTGATTGGGCTTGGACGTGGACCATTGTCATTTATATCTCAAATTGGTCCTCTCGTTGGAGGCAAAAAATTCTCACATTGCTTGGTGCCTACTGATACTGATCCCAAAACTGCAAGCAAGATAAGTTTTGGAAATGGGAGTGAAGTTTCGGGTGACGGTGTGGTGACAACGTCATTGGTCGATAAAGCACTATTCCAGGATCAATATCTAGTGACGCTAGAAGGAGTTACCGTCGGAAATAAGTTTGTTCCGTTTAGTTCACAAGGAAACTTGAAGTTGTTTGAGAAAGGTAACATGATTGTCGACTCAGGAACAACTTTGACATATTTACCGCAAGATTTTTATGAGCGGGTGGTAACTCAAGTGAAGAAGACAGTTAATCCGAAATTGGATCCGGTCTATATGAATATCGTTTTAGATGATCCGACAGAGGGAACCCAGCTTTGCTTCAAAACCACGAAGAATCTGAAAGGACCTGATGTGACCATGCATTTTGAGGGTGGTGCTAAACTCAAGTTAACGGCAGAACAAGTGTTTTTTGAAGACCCAGAGAACAAGTTGTACTGCTTTGGAATGGTGAACACCTCTCGTTCGGACACCATCGGTGAAGATCAAGTTGGTATTTATGGAAACAATCTTCAGGGAAATATCTTGATCGGTTATGATCTGGATAGAAGGGTGGTCTCCTTCAAGCCAGCTGATTGCATAAAGATGAGTACAGCAAGCAATGGTGGGTTTAGTGTCAAACTCGTCCACCGAAACTCCCCAAAGTCGCCGTTTTACAATCATAACAAAACTCCTATGGGCAAGCCACAGTCACGAGTACAAGCCAACAACGGCCAGTATCTTATGAAGCTCTCACTTGGAAATCCGCTGTTCGATGTTTACGGCATTGCTGATACAGGCAGTGACTTATTATGGGCACAATGTGTACCATGTGAGGGCTGCTATAAGCAAATCAAACCCAAATTCGATCTGAAGAAGTCATCAACATATAACGACCTACCTTGTAGTGCACAAGAATGTAGTTTGGTTCCTAATTCTTGTTCGGCAGAAAATGTTTGCAGTTACCATTACGAATACGGAGACGGTTCGGTGACCAGAGGGGTATTGGCTAAAGAGACCATTTCCTTGGAATCCACGTCTGGGAACGGTACTGTTGCCCTAAAAGGTATTGCGTTTGGTTGTGGACATAACAATACTGGTGTTTTTAATCAAGATAATATGGGTCTAATTGGCCTTGGAGGAGGCCCTATATCTTTCATTTCTCAAGTGGCTCCCTTAGTTGGAGGCAAGAAGTTCTCATACTACTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_1 PPR_2 PPR_3

Protein Analysis

575

Amino Acids

62.3

Weight (kDa)

6.74

Isoelectric Point (pI)

29.98

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TAXi_N	PF14543	9 - 183	1.3e-49	Xylanase inhibitor N-terminal
Asp	PF00026	90 - 368	2e-10	Eukaryotic aspartyl protease
TAXi_C	PF14541	206 - 369	9.6e-22	Xylanase inhibitor C-terminal
TAXi_N	PF14543	420 - 574	1.1e-44	Xylanase inhibitor N-terminal

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008146)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_6g08430 FvH4_6g08430 FvH4_6g08430 FvH4_6g08430
malus_domestica	MD04G1187000.v1.1 MD12G1200400.v1.1
prunus_persica	Prupe.6G305500_v2.0.a1 Prupe.6G305500_v2.0.a1
pyrus_communis	pycom04g16510
rosa_chinensis	RchiOBHm_Chr3g0458391
rosa_laevigata	RLG00000025162
rosa_multiflora	Rmu_sc0036031.1_g000001
rosa_roxburghii	Rroxscaffold_6G00421110
rosa_rugosa	Rorug03G0027100 Rorug03G0027200 Rorug03G0027300 Rorug03G0027400 Rorug03G0027400 Rorug03G0027500
rosa_samantha	Rh3AG087200 Rh3BG090000 Rh3CG090400 Rh3DG091000
rosa_wichuraiana	Rw3G007410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	328
AatII	GACGTC	1 cut(s)	326
AccB1I	GGYRCC	1 cut(s)	499
AccBSI	CCGCTC	1 cut(s)	763
AccI	GTMKAC	1 cut(s)	717
AciI	CCGC	4 cut(s)	50, 746, 763, 1286
AclWI	GGATC	5 cut(s)	509, 621, 800, 813, 830
AcoI	YGGCCR	1 cut(s)	1252
AcsI	RAATTY	2 cut(s)	482, 1382
AcuI	CTGAAG	2 cut(s)	1037, 1412
AcyI	GRCGYC	1 cut(s)	323
AdeI	CACNNNGTG	1 cut(s)	1343
AfaI	GTAC	5 cut(s)	977, 1132, 1239, 1347, 1570
AfiI	CCNNNNNNNGG	6 cut(s)	119, 470, 845, 1355, 1560, 1700
AgsI	TTSAA	5 cut(s)	215, 688, 865, 956, 1105
AjiI	CACGTC	3 cut(s)	330, 431, 1557
AjnI	CCWGG	1 cut(s)	609
AjuI	GAANNNNNNNTTGG	2 cut(s)	1014, 1046
AluBI	AGCT	3 cut(s)	856, 1112, 1270
AluI	AGCT	3 cut(s)	856, 1112, 1270
Alw21I	GWGCWC	1 cut(s)	1432
Alw26I	GTCTC	3 cut(s)	1102, 1494, 1529
Alw44I	GTGCAC	1 cut(s)	1428
AlwI	GGATC	5 cut(s)	509, 621, 800, 813, 830
AlwNI	CAGNNNCTG	1 cut(s)	74
AoxI	GGCC	3 cut(s)	1252, 1651, 1663
ApaLI	GTGCAC	1 cut(s)	1428
ApeKI	GCWGC	1 cut(s)	1359
ApoI	RAATTY	2 cut(s)	482, 1382
AspS9I	GGNCC	5 cut(s)	99, 434, 461, 887, 1664
AsuHPI	GGTGA	6 cut(s)	29, 578, 589, 1003, 1031, 1522
AvaII	GGWCC	4 cut(s)	99, 434, 461, 887
BaeGI	GKGCMC	2 cut(s)	1339, 1432
BamHI	GGATCC	1 cut(s)	805
BanI	GGYRCC	1 cut(s)	499
BarI	GAAGNNNNNNTAC	1 cut(s)	1703
BauI	CACGAG	1 cut(s)	1233
BbsI	GAAGAC	3 cut(s)	222, 791, 963
Bbv12I	GWGCWC	1 cut(s)	1432
BbvI	GCAGC	1 cut(s)	1346
BccI	CCATC	4 cut(s)	8, 113, 358, 1022
BceAI	ACGGC	5 cut(s)	97, 951, 1174, 1267, 1318
BcgI	CGANNNNNNTGC	2 cut(s)	47, 81
BciT130I	CCWGG	1 cut(s)	611
BciVI	GTATCC	1 cut(s)	355
BcoDI	GTCTC	3 cut(s)	1102, 1494, 1529
BfaI	CTAG	3 cut(s)	623, 632, 1726
BfuI	GTATCC	1 cut(s)	355
BisI	GCNGC	1 cut(s)	1360
BlsI	GCNGC	1 cut(s)	1361
Bme1390I	CCNGG	1 cut(s)	611
Bme18I	GGWCC	4 cut(s)	99, 434, 461, 887
BmgBI	CACGTC	3 cut(s)	330, 431, 1557
BmgT120I	GGNCC	5 cut(s)	99, 434, 461, 887, 1664
BmiI	GGNNCC	7 cut(s)	101, 183, 501, 807, 850, 1449, 1692
BmrFI	CCNGG	1 cut(s)	611
BoxI	GACNNNNGTC	1 cut(s)	439
BpiI	GAAGAC	3 cut(s)	222, 791, 963
BpuEI	CTTGAG	3 cut(s)	759, 911, 1668
BsaBI	GATNNNNATC	2 cut(s)	513, 618
BsaHI	GRCGYC	1 cut(s)	323
BsaI	GGTCTC	2 cut(s)	1102, 1529
BsaJI	CCNNGG	2 cut(s)	1545, 1654
BsaWI	WCCGGW	1 cut(s)	808
BsaXI	ACNNNNNCTCC	4 cut(s)	630, 660, 1160, 1190
Bsc4I	CCNNNNNNNGG	6 cut(s)	119, 470, 845, 1355, 1560, 1700
Bse118I	RCCGGY	1 cut(s)	340
Bse1I	ACTGG	2 cut(s)	1255, 1621
Bse3DI	GCAATG	3 cut(s)	490, 1147, 1305
Bse8I	GATNNNNATC	2 cut(s)	513, 618
BseBI	CCWGG	1 cut(s)	611
BseDI	CCNNGG	2 cut(s)	1545, 1654
BseGI	GGATG	1 cut(s)	16
BseJI	GATNNNNATC	2 cut(s)	513, 618
BseLI	CCNNNNNNNGG	6 cut(s)	119, 470, 845, 1355, 1560, 1700
BseMI	GCAATG	3 cut(s)	490, 1147, 1305
BseMII	CTCAG	2 cut(s)	93, 735
BseNI	ACTGG	2 cut(s)	1255, 1621
BseRI	GAGGAG	1 cut(s)	1674
BseSI	GKGCMC	2 cut(s)	1339, 1432
BseXI	GCAGC	1 cut(s)	1346
BseYI	CCCAGC	1 cut(s)	852
BshFI	GGCC	3 cut(s)	1254, 1653, 1665
BshNI	GGYRCC	1 cut(s)	499
BsiHKAI	GWGCWC	1 cut(s)	1432
BsiSI	CCGG	2 cut(s)	341, 809
BslI	CCNNNNNNNGG	6 cut(s)	119, 470, 845, 1355, 1560, 1700
BsmAI	GTCTC	3 cut(s)	1102, 1494, 1529
BsmBI	CGTCTC	1 cut(s)	1494
BsnI	GGCC	3 cut(s)	1254, 1653, 1665
Bso31I	GGTCTC	2 cut(s)	1102, 1529
Bsp1286I	GDGCHC	2 cut(s)	1339, 1432
Bsp143I	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
BspACI	CCGC	4 cut(s)	50, 746, 763, 1286
BspANI	GGCC	3 cut(s)	1254, 1653, 1665
BspCNI	CTCAG	2 cut(s)	92, 734
BspLI	GGNNCC	7 cut(s)	101, 183, 501, 807, 850, 1449, 1692
BspPI	GGATC	5 cut(s)	509, 621, 800, 813, 830
BspT107I	GGYRCC	1 cut(s)	499
BspTNI	GGTCTC	2 cut(s)	1102, 1529
BsrBI	CCGCTC	1 cut(s)	763
BsrDI	GCAATG	3 cut(s)	490, 1147, 1305
BsrFI	RCCGGY	1 cut(s)	340
BsrI	ACTGG	2 cut(s)	1255, 1621
BssAI	RCCGGY	1 cut(s)	340
BssECI	CCNNGG	2 cut(s)	1545, 1654
BssMI	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
BssNI	GRCGYC	1 cut(s)	323
BssSI	CACGAG	1 cut(s)	1233
BssT1I	CCWWGG	2 cut(s)	1545, 1654
Bst2BI	CACGAG	1 cut(s)	1233
Bst2UI	CCWGG	1 cut(s)	611
Bst4CI	ACNGT	8 cut(s)	386, 572, 646, 790, 1230, 1505, 1568, 1573
BstACI	GRCGYC	1 cut(s)	323
BstC8I	GCNNGC	6 cut(s)	110, 141, 529, 1110, 1138, 1223
BstDEI	CTNAG	3 cut(s)	79, 721, 1696
BstEII	GGTNACC	1 cut(s)	1510
BstF5I	GGATG	1 cut(s)	16
BstKTI	GATC	8 cut(s)	517, 616, 808, 838, 1027, 1071, 1081, 1390
BstMAI	GTCTC	3 cut(s)	1102, 1494, 1529
BstMBI	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
BstNI	CCWGG	1 cut(s)	611
BstNSI	RCATGY	1 cut(s)	143
BstPAI	GACNNNNGTC	1 cut(s)	439
BstPI	GGTNACC	1 cut(s)	1510
BstSCI	CCNGG	1 cut(s)	609
BstSLI	GKGCMC	2 cut(s)	1339, 1432
BstV1I	GCAGC	1 cut(s)	1346
BstV2I	GAAGAC	3 cut(s)	222, 791, 963
BstX2I	RGATCY	1 cut(s)	805
BstXI	CCANNNNNNTGG	1 cut(s)	1546
BstYI	RGATCY	1 cut(s)	805
BsuI	GTATCC	1 cut(s)	355
BsuRI	GGCC	3 cut(s)	1254, 1653, 1665
BtrI	CACGTC	3 cut(s)	330, 431, 1557
BtsCI	GGATG	1 cut(s)	16
BtsI	GCAGTG	1 cut(s)	1327
BtsIMutI	CAGTG	2 cut(s)	391, 1327
Cac8I	GCNNGC	6 cut(s)	110, 141, 529, 1110, 1138, 1223
CaiI	CAGNNNCTG	1 cut(s)	74
Cfr10I	RCCGGY	1 cut(s)	340
Cfr13I	GGNCC	5 cut(s)	99, 434, 461, 887, 1664
CseI	GACGC	1 cut(s)	637
Csp6I	GTAC	5 cut(s)	976, 1131, 1238, 1346, 1569
CviAII	CATG	5 cut(s)	140, 145, 709, 901, 1350
CviQI	GTAC	5 cut(s)	976, 1131, 1238, 1346, 1569
DdeI	CTNAG	3 cut(s)	79, 721, 1696
DpnI	GATC	8 cut(s)	516, 615, 807, 837, 1026, 1070, 1080, 1389
DpnII	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
DraIII	CACNNNGTG	1 cut(s)	1343
DrdI	GACNNNNNNGTC	1 cut(s)	328
DseDI	GACNNNNNNGTC	1 cut(s)	328
EaeI	YGGCCR	1 cut(s)	1252
EciI	GGCGGA	1 cut(s)	39
Eco130I	CCWWGG	2 cut(s)	1545, 1654
Eco31I	GGTCTC	2 cut(s)	1102, 1529
Eco47I	GGWCC	4 cut(s)	99, 434, 461, 887
Eco57I	CTGAAG	2 cut(s)	1037, 1412
Eco91I	GGTNACC	1 cut(s)	1510
EcoO109I	RGGNCCY	2 cut(s)	887, 1664
EcoO65I	GGTNACC	1 cut(s)	1510
EcoRII	CCWGG	1 cut(s)	609
EcoT14I	CCWWGG	2 cut(s)	1545, 1654
EcoT22I	ATGCAT	1 cut(s)	906
ErhI	CCWWGG	2 cut(s)	1545, 1654
Esp3I	CGTCTC	1 cut(s)	1494
FaeI	CATG	5 cut(s)	143, 148, 712, 904, 1353
FatI	CATG	5 cut(s)	139, 144, 708, 900, 1349
FauI	CCCGC	1 cut(s)	756
FblI	GTMKAC	1 cut(s)	717
Fnu4HI	GCNGC	1 cut(s)	1360
FokI	GGATG	1 cut(s)	23
Fsp4HI	GCNGC	1 cut(s)	1360
FspBI	CTAG	3 cut(s)	623, 632, 1726
GluI	GCNGC	1 cut(s)	1360
GsaI	CCCAGC	1 cut(s)	856
HaeIII	GGCC	3 cut(s)	1254, 1653, 1665
HapII	CCGG	2 cut(s)	341, 809
HgaI	GACGC	1 cut(s)	637
Hin1I	GRCGYC	1 cut(s)	323
Hin1II	CATG	5 cut(s)	143, 148, 712, 904, 1353
HincII	GTYRAC	2 cut(s)	718, 933
HindII	GTYRAC	2 cut(s)	718, 933
HinfI	GANTC	5 cut(s)	77, 278, 719, 877, 1550
HpaI	GTTAAC	1 cut(s)	933
HpaII	CCGG	2 cut(s)	341, 809
HphI	GGTGA	6 cut(s)	29, 578, 589, 1003, 1031, 1522
Hpy188I	TCNGA	6 cut(s)	650, 798, 840, 882, 1009, 1392
Hpy188III	TCNNGA	8 cut(s)	212, 319, 361, 723, 1066, 1082, 1233, 1631
Hpy99I	CGWCG	2 cut(s)	59, 650
HpyAV	CCTTC	4 cut(s)	172, 629, 1083, 1111
HpyCH4III	ACNGT	8 cut(s)	386, 572, 646, 790, 1230, 1505, 1568, 1573
HpyCH4IV	ACGT	5 cut(s)	323, 329, 430, 584, 1556
HpyCH4V	TGCA	8 cut(s)	68, 108, 252, 527, 904, 1119, 1430, 1479
HpyF3I	CTNAG	3 cut(s)	79, 721, 1696
HpySE526I	ACGT	5 cut(s)	323, 329, 430, 584, 1556
Hsp92I	GRCGYC	1 cut(s)	323
Hsp92II	CATG	5 cut(s)	143, 148, 712, 904, 1353
KspAI	GTTAAC	1 cut(s)	933
Kzo9I	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
LmnI	GCTCC	1 cut(s)	1696
Lsp1109I	GCAGC	1 cut(s)	1346
MaeI	CTAG	3 cut(s)	623, 632, 1726
MaeII	ACGT	5 cut(s)	323, 329, 430, 584, 1556
MalI	GATC	8 cut(s)	516, 615, 807, 837, 1026, 1070, 1080, 1389
MbiI	CCGCTC	1 cut(s)	763
MboI	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
MboII	GAAGA	8 cut(s)	227, 793, 796, 886, 968, 1034, 1043, 1405
MflI	RGATCY	1 cut(s)	805
MhlI	GDGCHC	2 cut(s)	1339, 1432
MluCI	AATT	7 cut(s)	312, 456, 482, 800, 1382, 1453, 1647
MlyI	GAGTC	3 cut(s)	71, 272, 713
MmeI	TCCRAC	4 cut(s)	451, 628, 863, 1681
Mph1103I	ATGCAT	1 cut(s)	906
MseI	TTAA	4 cut(s)	395, 792, 932, 1626
MslI	CAYNNNNRTG	2 cut(s)	1124, 1435
MspA1I	CMGCKG	2 cut(s)	1112, 1288
MspI	CCGG	2 cut(s)	341, 809
MspR9I	CCNGG	1 cut(s)	611
MvaI	CCWGG	1 cut(s)	611
NdeII	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
NlaIII	CATG	5 cut(s)	143, 148, 712, 904, 1353
NlaIV	GGNNCC	7 cut(s)	101, 183, 501, 807, 850, 1449, 1692
NmuCI	GTSAC	7 cut(s)	566, 577, 625, 895, 1230, 1322, 1510
NsiI	ATGCAT	1 cut(s)	906
NspI	RCATGY	1 cut(s)	143
PaeI	GCATGC	1 cut(s)	143
PfeI	GAWTC	2 cut(s)	877, 1550
PflFI	GACNNNGTC	1 cut(s)	583
PfoI	TCCNGGA	1 cut(s)	609
PkrI	GCNGC	1 cut(s)	1361
PleI	GAGTC	3 cut(s)	71, 272, 713
PpsI	GAGTC	3 cut(s)	71, 272, 713
PpuMI	RGGWCCY	1 cut(s)	887
PshAI	GACNNNNGTC	1 cut(s)	439
Psp5II	RGGWCCY	1 cut(s)	887
Psp6I	CCWGG	1 cut(s)	609
PspEI	GGTNACC	1 cut(s)	1510
PspFI	CCCAGC	1 cut(s)	852
PspGI	CCWGG	1 cut(s)	609
PspN4I	GGNNCC	7 cut(s)	101, 183, 501, 807, 850, 1449, 1692
PspPI	GGNCC	5 cut(s)	99, 434, 461, 887, 1664
PspPPI	RGGWCCY	1 cut(s)	887
PsrI	GAACNNNNNNTAC	2 cut(s)	959, 991
PstNI	CAGNNNCTG	1 cut(s)	74
PsuI	RGATCY	1 cut(s)	805
PsyI	GACNNNGTC	1 cut(s)	583
PvuII	CAGCTG	1 cut(s)	1112
RsaI	GTAC	5 cut(s)	977, 1132, 1239, 1347, 1570
RsaNI	GTAC	5 cut(s)	976, 1131, 1238, 1346, 1569
RseI	CAYNNNNRTG	2 cut(s)	1124, 1435
SalI	GTCGAC	1 cut(s)	716
SaqAI	TTAA	4 cut(s)	395, 792, 932, 1626
SatI	GCNGC	1 cut(s)	1360
Sau3AI	GATC	8 cut(s)	514, 613, 805, 835, 1024, 1068, 1078, 1387
Sau96I	GGNCC	5 cut(s)	99, 434, 461, 887, 1664
SchI	GAGTC	3 cut(s)	71, 272, 713
ScrFI	CCNGG	1 cut(s)	611
SduI	GDGCHC	2 cut(s)	1339, 1432
SinI	GGWCC	4 cut(s)	99, 434, 461, 887
SmiMI	CAYNNNNRTG	2 cut(s)	1124, 1435
SmlI	CTYRAG	3 cut(s)	774, 926, 1683
SmoI	CTYRAG	3 cut(s)	774, 926, 1683
SphI	GCATGC	1 cut(s)	143
Sse9I	AATT	7 cut(s)	312, 456, 482, 800, 1382, 1453, 1647
SsiI	CCGC	4 cut(s)	50, 746, 763, 1286
SspMI	CTAG	3 cut(s)	623, 632, 1726
StyD4I	CCNGG	1 cut(s)	609
StyI	CCWWGG	2 cut(s)	1545, 1654
TaaI	ACNGT	8 cut(s)	386, 572, 646, 790, 1230, 1505, 1568, 1573
TaiI	ACGT	5 cut(s)	326, 332, 433, 587, 1559
TaqI	TCGA	6 cut(s)	57, 150, 594, 717, 1293, 1386
TasI	AATT	7 cut(s)	312, 456, 482, 800, 1382, 1453, 1647
TatI	WGTACW	3 cut(s)	975, 1130, 1237
TfiI	GAWTC	2 cut(s)	877, 1550
Tru1I	TTAA	4 cut(s)	395, 792, 932, 1626
Tru9I	TTAA	4 cut(s)	395, 792, 932, 1626
TscAI	CASTG	2 cut(s)	391, 1327
TseFI	GTSAC	7 cut(s)	566, 577, 625, 895, 1230, 1322, 1510
TseI	GCWGC	1 cut(s)	1359
Tsp45I	GTSAC	7 cut(s)	566, 577, 625, 895, 1230, 1322, 1510
TspDTI	ATGAA	5 cut(s)	44, 149, 833, 1280, 1666
TspGWI	ACGGA	2 cut(s)	654, 1512
TspRI	CASTG	2 cut(s)	391, 1327
Tth111I	GACNNNGTC	1 cut(s)	583
VneI	GTGCAC	1 cut(s)	1428
VpaK11BI	GGWCC	4 cut(s)	99, 434, 461, 887
XapI	RAATTY	2 cut(s)	482, 1382
XceI	RCATGY	1 cut(s)	143
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1522
XmiI	GTMKAC	1 cut(s)	717
XspI	CTAG	3 cut(s)	623, 632, 1726
ZraI	GACGTC	1 cut(s)	324
Zsp2I	ATGCAT	1 cut(s)	906

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.