Rh3DG091000

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr3D
OG0008146
Physical Location & Seq
Forward (+)
7034658 .. 7039262
4605 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh3DG091000.1

Sequence Viewer

Length: 2187 bp
ATGGCTGTAAAGCTCCGGCCTTTAGCTTTTTCCAAGAGAATCCCCATGTGGGTTTGTTCAAGTGCTTACCTTTCTTCAATTTCATGCGCTAAAACCATTGACACTCACCCAGAAAACAATCAAAACCCACCATATTCATCTGAGTTTGAGCAAAATATTCACTCTTTGAGGAACAAGCTTGTTCCTGATAACTTGGTCCGGGTTTTGGATAGCACTGATGATTTGAGCTCGGCAGTGAAGCTATTCAAATGGGCTTCGCTCCAAAAAAGGTTTAGCCACACCGCAGAAACGTATTATAAGATGATTCTGAAACTGGGTTTGGCTGGAAATGTTAAGGAAATGGAAGGGTTTTGTCATCATATGGTCAAAGATAGATGCCCAGGTGTTGGAGAAGCTCTTTTGGAATTGATTGATGTGTTTGTTAGGCATGGTAGGCTGAGTGAGGCAGTAAGGGTACTTGTGAATATGAAAGCAGGTGGATATAGGGTCTCAATTGAGACATTTAATGTTGTATTGGGTGCTCTTGTGAAAGAGAAGAGGGATTTTCGAGACATAGTGCTTGTTTATAAGGAGATGGTGAAGGCAGGGATGTTACCGACTGTTGAGACTTTGAATTATATGTTGGAGGGTTTGTTGGAGACTGATCGGATTGAGTCGGCTTTGGATCAGTATAGGAGAATGAAAAAGAAGGGGTGTAGTCCTAATAGTAGAACATTTGAGATAATCATACAGGCTCTTTTTGCAAAAGATCGAGTGGATGAAGCTGTTGTTGTTTTAAGTGAAATGTTCGAACTTGATTGTCAGCTTGATTTGAGTTTTTATACCTGCATAATACCCTTGTTATGTGGGGAAAATAAACCAGCAGAGGGAATCAGGTTGTTCAAAATGATGAGAGCTTCTAATTTTATGCCGCATTCTCTGATTTATGTGGTTTTATTACAGTGTTTATGCAAGAACCTATATTTAGATGATTCGATAAAGGTTCTAGAAGACATGATAGAAACTGGGTTGACACCACCTACTAATTTGTTTGTGGATGTAATGAATGTCTTCTGTACATTGGGAAAGATAGATGATGCTTTGAAGTTCTTGAAAGATAAGTATATCCTTGAAACTTCTGCCTATAATGTGTTGCTTGAAGGTCGCTGCAATACTGGAAAACTTCTCATCGCAAAAGATCTACTTGTGGAAATGTCCGAAAGAAACCTAGCTGATTGTAATTCTTGGAATATTCTCATCAGACAGCTTTGTGAGAGTGCAAGGATTAGGGAAGTGTTTGAACTTCTAGGTAGAATGGTGGTATCATCTTCTATTCCTGATTGTGCTACGTACTCAGCTCTTGTTGTTGGCAACTGCAAAATGAGCAATTACAGAAAAGCTCTTGATATATTTCATCACATTCGCACCAAATACTGGGTTTTGGACCCTAGATCTTACTCTGAGCTTGTCAAAGGCCTTTGCCTTGTGGAAATGACTCATGAGGCGGCTGATGTGTTCTATTACATGTCTAGAAATGGATGCACTCTCCATTCTTCCTCCTTCAATATGTTGATCAAGGGTATTTGTGAGAGAGGAGAGGTTGTTGAAGCAATAAGGCTACAGAAACTGGCTTACTATTCTGGTACTTTTTATACAAGTTCAACTTACTCCACTGTTTTGCTTGGATTGTCAAGATTAGACAGGACAAAAGAACTGCTAGTTATCCTATCAAAAATGCTGGTGGAGGGTTGCAATCTTGATTTGGATGCCTACTGCATCCTCATACAATGCATGAGTGTGCAGAATCGAGTAAAAGAATGCGTGTTGCTTTTCAGCACGATGGTCAGTAAGGGTCTTGTACCTGATTCAGAGAGACTAGTTAGTATCCTGTCTTGTATAGCCAAACATTCTCAGTTGCACAGAATTTTAGGATCAATACAGAAACTTATTCCCAATAGTGAAGTTCTAAATTCAACAACCTACAACATCCTAATTCATGGCCTCTGGATAGAGGGTTATAAACGTGATGCCAGCAGATTTTTGGATATAATGTTGGAAAAGGGTTGGGTGCCAGATGCCAAGACTCATGCATTGTTGATTGGGTCTGCTGTTAGTGATGAAGTAGATAAGAGATCAATGGACTATGATACTTTTAGTGTCCAAGATACTGTTAGCAACATCCTGGCGGAGGGCTTAGATGCGTCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_1 PPR_2 PPR_3

Protein Analysis

728

Amino Acids

82.37

Weight (kDa)

6.74

Isoelectric Point (pI)

38.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
TPR_24 PF23276 136 - 226 1.6e-07 Fungal tetratrico peptide repeats
PPR_2 PF13041 165 - 211 2.6e-06 PPR repeat family
PPR_2 PF13041 199 - 246 3.3e-11 PPR repeat family
PPR_1 PF12854 230 - 262 5.7e-07 PPR repeat
PPR_2 PF13041 408 - 453 1.5e-06 PPR repeat family
PPR_2 PF13041 650 - 693 2.7e-06 PPR repeat family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 297, 567, 1998
AarI CACCTGC 1 cut(s) 464
Acc36I ACCTGC 2 cut(s) 464, 833
AccB1I GGYRCC 1 cut(s) 2047
AccB7I CCANNNNNTGG 2 cut(s) 386, 1413
AciI CCGC 4 cut(s) 282, 911, 1484, 2165
AclWI GGATC 2 cut(s) 672, 1918
AcsI RAATTY 2 cut(s) 1902, 1948
AfaI GTAC 5 cut(s) 456, 1057, 1331, 1624, 1839
AfiI CCNNNNNNNGG 6 cut(s) 49, 205, 386, 866, 1413, 2167
AflIII ACRYGT 1 cut(s) 1503
AhlI ACTAGT 1 cut(s) 1855
AjnI CCWGG 2 cut(s) 379, 2160
AjuI GAANNNNNNNTTGG 4 cut(s) 302, 334, 605, 637
Alw21I GWGCWC 2 cut(s) 230, 523
Alw26I GTCTC 6 cut(s) 491, 493, 543, 599, 632, 1846
AlwI GGATC 2 cut(s) 672, 1918
AlwNI CAGNNNCTG 1 cut(s) 1606
AoxI GGCC 3 cut(s) 17, 1453, 1978
ApeKI GCWGC 1 cut(s) 1146
ApoI RAATTY 2 cut(s) 1902, 1948
Asp700I GAANNNNTTC 2 cut(s) 242, 1049
AspLEI GCGC 1 cut(s) 89
AspS9I GGNCC 2 cut(s) 196, 1423
AsuC2I CCSGG 1 cut(s) 200
AsuHPI GGTGA 2 cut(s) 98, 589
AsuII TTCGAA 1 cut(s) 789
AvaII GGWCC 2 cut(s) 196, 1423
BanI GGYRCC 1 cut(s) 2047
BanII GRGCYC 1 cut(s) 230
BbsI GAAGAC 2 cut(s) 996, 1042
Bbv12I GWGCWC 2 cut(s) 230, 523
BbvI GCAGC 1 cut(s) 1133
BccI CCATC 2 cut(s) 568, 1813
BciT130I CCWGG 2 cut(s) 381, 2162
BciVI GTATCC 1 cut(s) 1874
BclI TGATCA 1 cut(s) 1551
BcnI CCSGG 1 cut(s) 200
BcoDI GTCTC 6 cut(s) 491, 493, 543, 599, 632, 1846
BcuI ACTAGT 1 cut(s) 1855
BfaI CTAG 7 cut(s) 986, 1208, 1286, 1428, 1509, 1697, 1856
BfmI CTRYAG 1 cut(s) 1598
BfuAI ACCTGC 2 cut(s) 464, 833
BfuI GTATCC 1 cut(s) 1874
BglII AGATCT 2 cut(s) 1177, 1430
BisI GCNGC 3 cut(s) 911, 1147, 1485
BlsI GCNGC 3 cut(s) 912, 1148, 1486
Bme1390I CCNGG 3 cut(s) 200, 381, 2162
Bme18I GGWCC 2 cut(s) 196, 1423
BmgT120I GGNCC 2 cut(s) 196, 1423
BmiI GGNNCC 2 cut(s) 1425, 2049
BmrFI CCNGG 3 cut(s) 200, 381, 2162
BmrI ACTGGG 3 cut(s) 323, 1014, 1423
BmsI GCATC 8 cut(s) 365, 1066, 1508, 1735, 1764, 1996, 2044, 2167
BmuI ACTGGG 3 cut(s) 323, 1014, 1423
BpiI GAAGAC 2 cut(s) 996, 1042
Bpu14I TTCGAA 1 cut(s) 789
BpuMI CCSGG 1 cut(s) 200
BsaAI YACGTR 1 cut(s) 1329
BsaI GGTCTC 1 cut(s) 493
BsaJI CCNNGG 1 cut(s) 379
BsaXI ACNNNNNCTCC 4 cut(s) 617, 647, 1566, 1596
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 205, 386, 866, 1413, 2167
Bse1I ACTGG 5 cut(s) 318, 1009, 1159, 1418, 1611
BseBI CCWGG 2 cut(s) 381, 2162
BseDI CCNNGG 1 cut(s) 379
BseGI GGATG 8 cut(s) 594, 763, 1042, 1523, 1750, 1755, 1965, 2157
BseLI CCNNNNNNNGG 6 cut(s) 49, 205, 386, 866, 1413, 2167
BseMII CTCAG 5 cut(s) 132, 428, 1347, 1431, 1904
BseNI ACTGG 5 cut(s) 318, 1009, 1159, 1418, 1611
BseRI GAGGAG 1 cut(s) 1587
BseXI GCAGC 1 cut(s) 1133
BsgI GTGCAG 1 cut(s) 1799
BshFI GGCC 3 cut(s) 19, 1455, 1980
BshNI GGYRCC 1 cut(s) 2047
BsiHKAI GWGCWC 2 cut(s) 230, 523
BsiSI CCGG 2 cut(s) 16, 199
BslI CCNNNNNNNGG 6 cut(s) 49, 205, 386, 866, 1413, 2167
BsmAI GTCTC 6 cut(s) 491, 493, 543, 599, 632, 1846
BsmI GAATGC 2 cut(s) 913, 1802
BsnI GGCC 3 cut(s) 19, 1455, 1980
Bso31I GGTCTC 1 cut(s) 493
Bsp119I TTCGAA 1 cut(s) 789
Bsp1286I GDGCHC 2 cut(s) 230, 523
Bsp1407I TGTACA 1 cut(s) 1055
Bsp143I GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
BspACI CCGC 4 cut(s) 282, 911, 1484, 2165
BspANI GGCC 3 cut(s) 19, 1455, 1980
BspCNI CTCAG 5 cut(s) 133, 429, 1346, 1432, 1903
BspHI TCATGA 2 cut(s) 1477, 2183
BspLI GGNNCC 2 cut(s) 1425, 2049
BspMI ACCTGC 2 cut(s) 464, 833
BspPI GGATC 2 cut(s) 672, 1918
BspT104I TTCGAA 1 cut(s) 789
BspT107I GGYRCC 1 cut(s) 2047
BspTNI GGTCTC 1 cut(s) 493
BsrGI TGTACA 1 cut(s) 1055
BsrI ACTGG 5 cut(s) 318, 1009, 1159, 1418, 1611
BssECI CCNNGG 1 cut(s) 379
BssMI GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
Bst2UI CCWGG 2 cut(s) 381, 2162
Bst4CI ACNGT 4 cut(s) 601, 942, 1654, 2149
Bst6I CTCTTC 1 cut(s) 530
BstAUI TGTACA 1 cut(s) 1055
BstBAI YACGTR 1 cut(s) 1329
BstBI TTCGAA 1 cut(s) 789
BstC8I GCNNGC 1 cut(s) 2011
BstDEI CTNAG 6 cut(s) 141, 437, 1333, 1440, 1890, 2173
BstENI CCTNNNNNAGG 1 cut(s) 2165
BstF5I GGATG 8 cut(s) 594, 763, 1042, 1523, 1750, 1755, 1965, 2157
BstHHI GCGC 1 cut(s) 89
BstKTI GATC 8 cut(s) 646, 667, 751, 1180, 1433, 1554, 1913, 2114
BstMAI GTCTC 6 cut(s) 491, 493, 543, 599, 632, 1846
BstMBI GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
BstMWI GCNNNNNNNGC 3 cut(s) 433, 740, 1362
BstNI CCWGG 2 cut(s) 381, 2162
BstNSI RCATGY 1 cut(s) 1507
BstSCI CCNGG 3 cut(s) 198, 379, 2160
BstSFI CTRYAG 1 cut(s) 1598
BstSNI TACGTA 1 cut(s) 1329
BstV1I GCAGC 1 cut(s) 1133
BstV2I GAAGAC 2 cut(s) 996, 1042
BstX2I RGATCY 2 cut(s) 1177, 1430
BstYI RGATCY 2 cut(s) 1177, 1430
BsuI GTATCC 1 cut(s) 1874
BsuRI GGCC 3 cut(s) 19, 1455, 1980
BtgZI GCGATG 1 cut(s) 1153
BtsCI GGATG 8 cut(s) 594, 763, 1042, 1523, 1750, 1755, 1965, 2157
BtsI GCAGTG 1 cut(s) 240
BtsIMutI CAGTG 4 cut(s) 213, 240, 947, 1650
BveI ACCTGC 2 cut(s) 464, 833
Cac8I GCNNGC 1 cut(s) 2011
CaiI CAGNNNCTG 1 cut(s) 1606
CciI TCATGA 2 cut(s) 1477, 2183
CfoI GCGC 1 cut(s) 89
Cfr13I GGNCC 2 cut(s) 196, 1423
CseI GACGC 1 cut(s) 2169
Csp6I GTAC 5 cut(s) 455, 1056, 1330, 1623, 1838
CviQI GTAC 5 cut(s) 455, 1056, 1330, 1623, 1838
DdeI CTNAG 6 cut(s) 141, 437, 1333, 1440, 1890, 2173
DpnI GATC 8 cut(s) 645, 666, 750, 1179, 1432, 1553, 1912, 2113
DpnII GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
Eam1104I CTCTTC 1 cut(s) 530
EarI CTCTTC 1 cut(s) 530
EciI GGCGGA 1 cut(s) 2180
Ecl136II GAGCTC 1 cut(s) 228
Eco105I TACGTA 1 cut(s) 1329
Eco147I AGGCCT 1 cut(s) 1455
Eco24I GRGCYC 1 cut(s) 230
Eco31I GGTCTC 1 cut(s) 493
Eco47I GGWCC 2 cut(s) 196, 1423
Eco53kI GAGCTC 1 cut(s) 228
EcoICRI GAGCTC 1 cut(s) 228
EcoNI CCTNNNNNAGG 1 cut(s) 2165
EcoRII CCWGG 2 cut(s) 379, 2160
EcoT22I ATGCAT 2 cut(s) 1772, 2071
EcoT38I GRGCYC 1 cut(s) 230
FalI AAGNNNNNCTT 4 cut(s) 1167, 1199, 1627, 1659
FauNDI CATATG 1 cut(s) 360
FbaI TGATCA 1 cut(s) 1551
Fnu4HI GCNGC 3 cut(s) 911, 1147, 1485
FokI GGATG 8 cut(s) 601, 770, 1049, 1530, 1742, 1757, 1952, 2144
FriOI GRGCYC 1 cut(s) 230
Fsp4HI GCNGC 3 cut(s) 911, 1147, 1485
FspBI CTAG 7 cut(s) 986, 1208, 1286, 1428, 1509, 1697, 1856
GlaI GCGC 1 cut(s) 88
GluI GCNGC 3 cut(s) 911, 1147, 1485
HaeIII GGCC 3 cut(s) 19, 1455, 1980
HapII CCGG 2 cut(s) 16, 199
HgaI GACGC 1 cut(s) 2169
HhaI GCGC 1 cut(s) 89
Hin6I GCGC 1 cut(s) 87
HinP1I GCGC 1 cut(s) 87
HincII GTYRAC 1 cut(s) 1011
HindII GTYRAC 1 cut(s) 1011
HindIII AAGCTT 1 cut(s) 176
HinfI GANTC 9 cut(s) 39, 304, 653, 870, 971, 1474, 1783, 1844, 2062
HpaII CCGG 2 cut(s) 16, 199
HphI GGTGA 2 cut(s) 98, 589
Hpy166II GTNNAC 1 cut(s) 1011
Hpy188I TCNGA 8 cut(s) 142, 309, 648, 921, 1198, 1241, 1441, 1849
Hpy8I GTNNAC 1 cut(s) 1011
HpyAV CCTTC 5 cut(s) 338, 574, 682, 1133, 1549
HpyCH4III ACNGT 4 cut(s) 601, 942, 1654, 2149
HpyCH4IV ACGT 3 cut(s) 290, 1328, 2002
HpyF10VI GCNNNNNNNGC 3 cut(s) 433, 740, 1362
HpyF3I CTNAG 6 cut(s) 141, 437, 1333, 1440, 1890, 2173
HpySE526I ACGT 3 cut(s) 290, 1328, 2002
HspAI GCGC 1 cut(s) 87
Ksp22I TGATCA 1 cut(s) 1551
Kzo9I GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
LmnI GCTCC 2 cut(s) 18, 264
Lsp1109I GCAGC 1 cut(s) 1133
LweI GCATC 8 cut(s) 365, 1066, 1508, 1735, 1764, 1996, 2044, 2167
MaeI CTAG 7 cut(s) 986, 1208, 1286, 1428, 1509, 1697, 1856
MaeII ACGT 3 cut(s) 290, 1328, 2002
MaeIII GTNAC 1 cut(s) 591
MalI GATC 8 cut(s) 645, 666, 750, 1179, 1432, 1553, 1912, 2113
MboI GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
MboII GAAGA 6 cut(s) 66, 547, 1001, 1042, 1299, 1524
MfeI CAATTG 1 cut(s) 492
MflI RGATCY 2 cut(s) 1177, 1430
MhlI GDGCHC 2 cut(s) 230, 523
MlyI GAGTC 3 cut(s) 662, 1468, 2056
MmeI TCCRAC 4 cut(s) 367, 603, 615, 2013
Mph1103I ATGCAT 2 cut(s) 1772, 2071
MroXI GAANNNNTTC 2 cut(s) 242, 1049
MseI TTAA 3 cut(s) 333, 504, 776
MslI CAYNNNNRTG 1 cut(s) 1775
MspI CCGG 2 cut(s) 16, 199
MspR9I CCNGG 3 cut(s) 200, 381, 2162
MunI CAATTG 1 cut(s) 492
Mva1269I GAATGC 2 cut(s) 913, 1802
MvaI CCWGG 2 cut(s) 381, 2162
MwoI GCNNNNNNNGC 3 cut(s) 433, 740, 1362
NciI CCSGG 1 cut(s) 200
NdeI CATATG 1 cut(s) 360
NdeII GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
NlaIV GGNNCC 2 cut(s) 1425, 2049
NmeAIII GCCGAG 1 cut(s) 209
NsiI ATGCAT 2 cut(s) 1772, 2071
NspI RCATGY 1 cut(s) 1507
NspV TTCGAA 1 cut(s) 789
PagI TCATGA 2 cut(s) 1477, 2183
PaqCI CACCTGC 1 cut(s) 464
PceI AGGCCT 1 cut(s) 1455
PciI ACATGT 1 cut(s) 1503
PctI GAATGC 2 cut(s) 913, 1802
PdmI GAANNNNTTC 2 cut(s) 242, 1049
PfeI GAWTC 6 cut(s) 39, 304, 870, 971, 1783, 1844
PflMI CCANNNNNTGG 2 cut(s) 386, 1413
PkrI GCNGC 3 cut(s) 912, 1148, 1486
PleI GAGTC 3 cut(s) 661, 1468, 2056
PpsI GAGTC 3 cut(s) 661, 1468, 2056
Ppu21I YACGTR 1 cut(s) 1329
PscI ACATGT 1 cut(s) 1503
PsiI TTATAA 3 cut(s) 297, 567, 1998
Psp124BI GAGCTC 1 cut(s) 230
Psp6I CCWGG 2 cut(s) 379, 2160
PspGI CCWGG 2 cut(s) 379, 2160
PspN4I GGNNCC 2 cut(s) 1425, 2049
PspPI GGNCC 2 cut(s) 196, 1423
PstNI CAGNNNCTG 1 cut(s) 1606
PsuI RGATCY 2 cut(s) 1177, 1430
RsaI GTAC 5 cut(s) 456, 1057, 1331, 1624, 1839
RsaNI GTAC 5 cut(s) 455, 1056, 1330, 1623, 1838
RseI CAYNNNNRTG 1 cut(s) 1775
SacI GAGCTC 1 cut(s) 230
SaqAI TTAA 3 cut(s) 333, 504, 776
SatI GCNGC 3 cut(s) 911, 1147, 1485
Sau3AI GATC 8 cut(s) 643, 664, 748, 1177, 1430, 1551, 1910, 2111
Sau96I GGNCC 2 cut(s) 196, 1423
SchI GAGTC 3 cut(s) 662, 1468, 2056
ScrFI CCNGG 3 cut(s) 200, 381, 2162
SduI GDGCHC 2 cut(s) 230, 523
SfaNI GCATC 8 cut(s) 365, 1066, 1508, 1735, 1764, 1996, 2044, 2167
SfcI CTRYAG 1 cut(s) 1598
SfuI TTCGAA 1 cut(s) 789
SinI GGWCC 2 cut(s) 196, 1423
SmiMI CAYNNNNRTG 1 cut(s) 1775
SnaBI TACGTA 1 cut(s) 1329
SpeI ACTAGT 1 cut(s) 1855
SseBI AGGCCT 1 cut(s) 1455
SsiI CCGC 4 cut(s) 282, 911, 1484, 2165
SspI AATATT 2 cut(s) 157, 1231
SspMI CTAG 7 cut(s) 986, 1208, 1286, 1428, 1509, 1697, 1856
SstI GAGCTC 1 cut(s) 230
StuI AGGCCT 1 cut(s) 1455
StyD4I CCNGG 3 cut(s) 198, 379, 2160
TaaI ACNGT 4 cut(s) 601, 942, 1654, 2149
TaiI ACGT 3 cut(s) 293, 1331, 2005
TaqI TCGA 5 cut(s) 547, 751, 789, 974, 1786
TatI WGTACW 1 cut(s) 1055
TauI GCSGC 2 cut(s) 913, 1487
TfiI GAWTC 6 cut(s) 39, 304, 870, 971, 1783, 1844
Tru1I TTAA 3 cut(s) 333, 504, 776
Tru9I TTAA 3 cut(s) 333, 504, 776
TscAI CASTG 4 cut(s) 220, 240, 947, 1657
TseI GCWGC 1 cut(s) 1146
TspDTI ATGAA 9 cut(s) 72, 126, 482, 695, 774, 1058, 1382, 1964, 2112
TspRI CASTG 4 cut(s) 220, 240, 947, 1657
Van91I CCANNNNNTGG 2 cut(s) 386, 1413
VpaK11BI GGWCC 2 cut(s) 196, 1423
XagI CCTNNNNNAGG 1 cut(s) 2165
XapI RAATTY 2 cut(s) 1902, 1948
XbaI TCTAGA 2 cut(s) 985, 1508
XceI RCATGY 1 cut(s) 1507
XcmI CCANNNNNNNNNTGG 1 cut(s) 2017
XmnI GAANNNNTTC 2 cut(s) 242, 1049
XspI CTAG 7 cut(s) 986, 1208, 1286, 1428, 1509, 1697, 1856
Zsp2I ATGCAT 2 cut(s) 1772, 2071
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.