pycom04g21400

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr4
Physical Location & Seq
Forward (+)
22586715 .. 22587347
633 bp
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UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 525 bp
ATGGCAGAAGCCCTGGATTTTCGCTCTCCATATCTACTCTCTGTAACTCTTCTCCTCCTCCTTGTTGTAGCCATCTTCTTCTCTCCCTTGAACCAACGACACCATCTCTCTCTCAGTTTCTCTTCTTCTCCCACCTCCTCCTCCTCCCCGTCTAACTTCCAACAGCAAACCACCCGCAATTTCAACACCACAGCTTTGCATGCTGTTGCACCTGCACCTGCACCTTCCCCATCGCCAACATCCCAGCCACCGCTCGAGCTTCGCCGCCGCCATGCGCCATCCTCAACTTCCACCGCCTCCAAACTCAGTCACGCTACTACCAAAAAGAAGAAGAGCAAAACGGAGAGGATTGAAGAGGAGTTGGGGATAGCAAGAGCGATTATCCGCAAAGCTATTCTCACAAAGAATGTCACCTCCGACCGGAAGGAGATTTACATCCCCAGAGGAAGTGTCTACAGAAATCCATATGCCTTTCATCAGTTAAGTCCTTTTTTTTTTTTTTTTTTAATCTCATTTTCTCTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

175

Amino Acids

19.43

Weight (kDa)

10.63

Isoelectric Point (pI)

69.36

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0017113)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 220, 226
Acc36I ACCTGC 2 cut(s) 220, 226
AccBSI CCGCTC 1 cut(s) 253
AccI GTMKAC 1 cut(s) 453
AciI CCGC 6 cut(s) 175, 251, 265, 268, 294, 385
AfiI CCNNNNNNNGG 1 cut(s) 420
AgsI TTSAA 3 cut(s) 91, 184, 353
AjnI CCWGG 1 cut(s) 12
AluBI AGCT 3 cut(s) 194, 259, 392
AluI AGCT 3 cut(s) 194, 259, 392
Ama87I CYCGRG 1 cut(s) 254
AspLEI GCGC 1 cut(s) 277
AsuHPI GGTGA 1 cut(s) 403
AvaI CYCGRG 1 cut(s) 254
BarI GAAGNNNNNNTAC 2 cut(s) 416, 448
BccI CCATC 4 cut(s) 80, 111, 238, 286
BciT130I CCWGG 1 cut(s) 14
BfmI CTRYAG 1 cut(s) 454
BfuAI ACCTGC 2 cut(s) 220, 226
BisI GCNGC 2 cut(s) 265, 268
BlsI GCNGC 2 cut(s) 266, 269
Bme1390I CCNGG 1 cut(s) 14
BmeT110I CYCGRG 1 cut(s) 254
BmrFI CCNGG 1 cut(s) 14
BsaBI GATNNNNATC 1 cut(s) 434
BsaJI CCNNGG 1 cut(s) 12
BsaWI WCCGGW 1 cut(s) 420
Bsc4I CCNNNNNNNGG 1 cut(s) 420
Bse8I GATNNNNATC 1 cut(s) 434
BseBI CCWGG 1 cut(s) 14
BseDI CCNNGG 1 cut(s) 12
BseGI GGATG 3 cut(s) 239, 278, 435
BseJI GATNNNNATC 1 cut(s) 434
BseLI CCNNNNNNNGG 1 cut(s) 420
BseMII CTCAG 2 cut(s) 127, 319
BseRI GAGGAG 6 cut(s) 44, 47, 127, 130, 133, 371
BseYI CCCAGC 1 cut(s) 243
BsgI GTGCAG 2 cut(s) 198, 204
Bsh1285I CGRYCG 1 cut(s) 421
BsiEI CGRYCG 1 cut(s) 421
BsiHKCI CYCGRG 1 cut(s) 254
BsiSI CCGG 1 cut(s) 421
BslI CCNNNNNNNGG 1 cut(s) 420
BsoBI CYCGRG 1 cut(s) 254
BspACI CCGC 6 cut(s) 175, 251, 265, 268, 294, 385
BspCNI CTCAG 2 cut(s) 126, 318
BspMI ACCTGC 2 cut(s) 220, 226
BspQI GCTCTTC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 253
BssECI CCNNGG 1 cut(s) 12
Bst2UI CCWGG 1 cut(s) 14
Bst6I CTCTTC 4 cut(s) 54, 127, 326, 348
BstC8I GCNNGC 1 cut(s) 201
BstDEI CTNAG 2 cut(s) 113, 305
BstF5I GGATG 3 cut(s) 239, 278, 435
BstHHI GCGC 1 cut(s) 277
BstMCI CGRYCG 1 cut(s) 421
BstMWI GCNNNNNNNGC 1 cut(s) 200
BstNI CCWGG 1 cut(s) 14
BstNSI RCATGY 1 cut(s) 203
BstSCI CCNGG 1 cut(s) 12
BstSFI CTRYAG 1 cut(s) 454
BtgZI GCGATG 1 cut(s) 216
BtsCI GGATG 3 cut(s) 239, 278, 435
BveI ACCTGC 2 cut(s) 220, 226
Cac8I GCNNGC 1 cut(s) 201
CfoI GCGC 1 cut(s) 277
CviAII CATG 2 cut(s) 200, 272
CviJI RGCY 6 cut(s) 11, 71, 194, 247, 259, 392
CviKI_1 RGCY 6 cut(s) 11, 71, 194, 247, 259, 392
DdeI CTNAG 2 cut(s) 113, 305
Eam1104I CTCTTC 4 cut(s) 54, 127, 326, 348
EarI CTCTTC 4 cut(s) 54, 127, 326, 348
Eco88I CYCGRG 1 cut(s) 254
EcoRII CCWGG 1 cut(s) 12
FaeI CATG 2 cut(s) 203, 275
FaiI YATR 6 cut(s) 31, 201, 273, 466, 468, 523
FatI CATG 2 cut(s) 199, 271
FauI CCCGC 1 cut(s) 182
FauNDI CATATG 1 cut(s) 466
FblI GTMKAC 1 cut(s) 453
Fnu4HI GCNGC 2 cut(s) 265, 268
FokI GGATG 3 cut(s) 226, 265, 422
Fsp4HI GCNGC 2 cut(s) 265, 268
GlaI GCGC 1 cut(s) 276
GluI GCNGC 2 cut(s) 265, 268
GsaI CCCAGC 1 cut(s) 247
HapII CCGG 1 cut(s) 421
HhaI GCGC 1 cut(s) 277
Hin1II CATG 2 cut(s) 203, 275
Hin6I GCGC 1 cut(s) 275
HinP1I GCGC 1 cut(s) 275
HpaII CCGG 1 cut(s) 421
HphI GGTGA 1 cut(s) 403
Hpy166II GTNNAC 1 cut(s) 454
Hpy188I TCNGA 1 cut(s) 418
Hpy8I GTNNAC 1 cut(s) 454
HpyAV CCTTC 2 cut(s) 234, 418
HpyCH4V TGCA 4 cut(s) 199, 209, 215, 221
HpyF10VI GCNNNNNNNGC 1 cut(s) 200
HpyF3I CTNAG 2 cut(s) 113, 305
Hsp92II CATG 2 cut(s) 203, 275
HspAI GCGC 1 cut(s) 275
LguI GCTCTTC 1 cut(s) 326
LpnPI CCDG 6 cut(s) 26, 225, 231, 257, 434, 454
MaeIII GTNAC 3 cut(s) 43, 308, 409
MbiI CCGCTC 1 cut(s) 253
MboII GAAGA 8 cut(s) 41, 67, 70, 114, 117, 340, 343, 365
MluCI AATT 1 cut(s) 178
MmeI TCCRAC 2 cut(s) 184, 441
MseI TTAA 2 cut(s) 482, 506
MspI CCGG 1 cut(s) 421
MspR9I CCNGG 1 cut(s) 14
MvaI CCWGG 1 cut(s) 14
MwoI GCNNNNNNNGC 1 cut(s) 200
NdeI CATATG 1 cut(s) 466
NlaIII CATG 2 cut(s) 203, 275
NmuCI GTSAC 2 cut(s) 308, 409
NspI RCATGY 1 cut(s) 203
PaeI GCATGC 1 cut(s) 203
PaeR7I CTCGAG 1 cut(s) 254
PaqCI CACCTGC 2 cut(s) 220, 226
PciSI GCTCTTC 1 cut(s) 326
PkrI GCNGC 2 cut(s) 266, 269
Psp6I CCWGG 1 cut(s) 12
PspFI CCCAGC 1 cut(s) 243
PspGI CCWGG 1 cut(s) 12
PspXI VCTCGAGB 1 cut(s) 254
SapI GCTCTTC 1 cut(s) 326
SaqAI TTAA 2 cut(s) 482, 506
SatI GCNGC 2 cut(s) 265, 268
ScrFI CCNGG 1 cut(s) 14
SetI ASST 8 cut(s) 137, 196, 214, 220, 226, 261, 394, 416
SfcI CTRYAG 1 cut(s) 454
Sfr274I CTCGAG 1 cut(s) 254
SlaI CTCGAG 1 cut(s) 254
SmlI CTYRAG 1 cut(s) 254
SmoI CTYRAG 1 cut(s) 254
SphI GCATGC 1 cut(s) 203
Sse9I AATT 1 cut(s) 178
SsiI CCGC 6 cut(s) 175, 251, 265, 268, 294, 385
StyD4I CCNGG 1 cut(s) 12
TaqI TCGA 1 cut(s) 255
TasI AATT 1 cut(s) 178
TauI GCSGC 2 cut(s) 267, 270
Tru1I TTAA 2 cut(s) 482, 506
Tru9I TTAA 2 cut(s) 482, 506
TseFI GTSAC 2 cut(s) 308, 409
Tsp45I GTSAC 2 cut(s) 308, 409
TspDTI ATGAA 1 cut(s) 464
TspGWI ACGGA 1 cut(s) 356
XceI RCATGY 1 cut(s) 203
XhoI CTCGAG 1 cut(s) 254
XmiI GTMKAC 1 cut(s) 453
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.