Rh2DG029600

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
1791737 .. 1792843
1107 bp
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UTR
Exon/CDS
Intron
Rh2DG029600.1

Sequence Viewer

Length: 231 bp
ATGGATTTCTCACAAGCTCCATGGATATATCGAAGGAGTAGGTGCGACGTTAATGGTACCAAAGACAAGACTAGTTTGGAGAGAATTGAAGATGGTTTAGCTGAAGCTCGAGCTTCAATTCTCGATGCAATTCGGTTTGAAGACTATACATCAGAGAAAGAAGAGACTTTTATCCCAAGAGGAAGCATTTACAAAAACCCTTATGCATTTCACCAATTGAGTTTTCGCTAA

Protein Analysis

76

Amino Acids

8.94

Weight (kDa)

5.77

Isoelectric Point (pI)

46.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017113)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 56
AccB1I GGYRCC 1 cut(s) 56
AcuI CTGAAG 1 cut(s) 123
AfaI GTAC 1 cut(s) 58
AgsI TTSAA 3 cut(s) 89, 117, 140
AhlI ACTAGT 1 cut(s) 71
AjuI GAANNNNNNNTTGG 1 cut(s) 207
AluBI AGCT 4 cut(s) 17, 101, 107, 113
AluI AGCT 4 cut(s) 17, 101, 107, 113
Alw26I GTCTC 1 cut(s) 158
Ama87I CYCGRG 1 cut(s) 108
Asp718I GGTACC 1 cut(s) 56
AsuHPI GGTGA 1 cut(s) 203
AvaI CYCGRG 1 cut(s) 108
BanI GGYRCC 1 cut(s) 56
BbsI GAAGAC 1 cut(s) 147
BccI CCATC 1 cut(s) 86
BcoDI GTCTC 1 cut(s) 158
BcuI ACTAGT 1 cut(s) 71
BfaI CTAG 1 cut(s) 72
BmeT110I CYCGRG 1 cut(s) 108
BmiI GGNNCC 1 cut(s) 58
BmsI GCATC 1 cut(s) 115
BpiI GAAGAC 1 cut(s) 147
BsaJI CCNNGG 1 cut(s) 20
BseDI CCNNGG 1 cut(s) 20
BshNI GGYRCC 1 cut(s) 56
BsiHKCI CYCGRG 1 cut(s) 108
BsmAI GTCTC 1 cut(s) 158
BsoBI CYCGRG 1 cut(s) 108
Bsp19I CCATGG 1 cut(s) 20
BspLI GGNNCC 1 cut(s) 58
BspT107I GGYRCC 1 cut(s) 56
BssECI CCNNGG 1 cut(s) 20
BssT1I CCWWGG 1 cut(s) 20
Bst6I CTCTTC 1 cut(s) 156
BstDSI CCRYGG 1 cut(s) 20
BstMAI GTCTC 1 cut(s) 158
BstV2I GAAGAC 1 cut(s) 147
BtgI CCRYGG 1 cut(s) 20
Csp6I GTAC 1 cut(s) 57
CviAII CATG 1 cut(s) 21
CviJI RGCY 4 cut(s) 17, 101, 107, 113
CviKI_1 RGCY 4 cut(s) 17, 101, 107, 113
CviQI GTAC 1 cut(s) 57
Eam1104I CTCTTC 1 cut(s) 156
EarI CTCTTC 1 cut(s) 156
Eco130I CCWWGG 1 cut(s) 20
Eco57I CTGAAG 1 cut(s) 123
Eco88I CYCGRG 1 cut(s) 108
EcoT14I CCWWGG 1 cut(s) 20
EcoT22I ATGCAT 1 cut(s) 208
ErhI CCWWGG 1 cut(s) 20
FaeI CATG 1 cut(s) 24
FaiI YATR 4 cut(s) 22, 28, 147, 204
FatI CATG 1 cut(s) 20
FspBI CTAG 1 cut(s) 72
Hin1II CATG 1 cut(s) 24
HphI GGTGA 1 cut(s) 203
Hpy188I TCNGA 1 cut(s) 154
Hpy188III TCNNGA 1 cut(s) 122
Hpy99I CGWCG 1 cut(s) 50
HpyAV CCTTC 1 cut(s) 27
HpyCH4IV ACGT 1 cut(s) 48
HpyCH4V TGCA 2 cut(s) 128, 206
HpySE526I ACGT 1 cut(s) 48
Hsp92II CATG 1 cut(s) 24
KpnI GGTACC 1 cut(s) 60
LmnI GCTCC 1 cut(s) 22
LweI GCATC 1 cut(s) 115
MaeI CTAG 1 cut(s) 72
MaeII ACGT 1 cut(s) 48
MboII GAAGA 3 cut(s) 101, 152, 173
MfeI CAATTG 1 cut(s) 215
MluCI AATT 4 cut(s) 84, 117, 129, 215
MnlI CCTC 1 cut(s) 173
Mph1103I ATGCAT 1 cut(s) 208
MseI TTAA 1 cut(s) 51
MunI CAATTG 1 cut(s) 215
NcoI CCATGG 1 cut(s) 20
NlaIII CATG 1 cut(s) 24
NlaIV GGNNCC 1 cut(s) 58
NsiI ATGCAT 1 cut(s) 208
PaeR7I CTCGAG 1 cut(s) 108
PspN4I GGNNCC 1 cut(s) 58
PspXI VCTCGAGB 1 cut(s) 108
RsaI GTAC 1 cut(s) 58
RsaNI GTAC 1 cut(s) 57
SaqAI TTAA 1 cut(s) 51
SetI ASST 6 cut(s) 19, 44, 51, 103, 109, 115
SfaNI GCATC 1 cut(s) 115
Sfr274I CTCGAG 1 cut(s) 108
SgeI CNNG 8 cut(s) 26, 33, 79, 84, 120, 122, 134, 189
SlaI CTCGAG 1 cut(s) 108
SmlI CTYRAG 1 cut(s) 108
SmoI CTYRAG 1 cut(s) 108
SpeI ACTAGT 1 cut(s) 71
Sse9I AATT 4 cut(s) 84, 117, 129, 215
SspMI CTAG 1 cut(s) 72
StyI CCWWGG 1 cut(s) 20
TaiI ACGT 1 cut(s) 51
TaqI TCGA 3 cut(s) 31, 109, 123
TasI AATT 4 cut(s) 84, 117, 129, 215
Tru1I TTAA 1 cut(s) 51
Tru9I TTAA 1 cut(s) 51
XhoI CTCGAG 1 cut(s) 108
XspI CTAG 1 cut(s) 72
Zsp2I ATGCAT 1 cut(s) 208
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.