Rh2DG029700

Glycosyltransferase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Forward (+)
1804246 .. 1804784
539 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG029700.1

Sequence Viewer

Length: 450 bp
ATGACTGGAAGCTTTCGTTGCCCTGCACTTTTTTTGTTAACTACATTGTCTTGTCTTCTGTTCTTCCACCTAATCTTCACACCTTTATCGTCTGAAACCCATCTCAGTATTTCTCCGGTATCCTCTTTCACTACACCTTTGACTAATCCAGAAAAGACCAGCAACTCAACTCCATCGACACATGTAGCTTCTTTAGATGAGGTTCTCACCAGCTCCATGTACCGAAGGATTAGGAGCAAGGTTGACGGTACCAAAGAGAAGACTAGTTTGGAGAGAATTGAAGAAGATTTAGCTAAAGCACGAGCATCGATTCTCAGAGCAATTCAGTTTGAAAACTACACATCAGAGAAAGAACAGAGTTTTGTCCCAAGAGGAAGCATTTACAAAAACCCCTATGCTTTTCACCAGTTGAGTTTTACGTACCCAATTAAGATGCTTAATGTCTTATAA

Protein Analysis

149

Amino Acids

16.85

Weight (kDa)

8.95

Isoelectric Point (pI)

48.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0017113)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 448
Acc65I GGTACC 1 cut(s) 248
AccB1I GGYRCC 1 cut(s) 248
AfaI GTAC 3 cut(s) 221, 250, 422
AflIII ACRYGT 1 cut(s) 181
AgsI TTSAA 2 cut(s) 281, 332
AhlI ACTAGT 1 cut(s) 263
AjuI GAANNNNNNNTTGG 2 cut(s) 251, 283
AluBI AGCT 4 cut(s) 12, 188, 213, 293
AluI AGCT 4 cut(s) 12, 188, 213, 293
Asp718I GGTACC 1 cut(s) 248
AsuHPI GGTGA 2 cut(s) 199, 395
BanI GGYRCC 1 cut(s) 248
BauI CACGAG 1 cut(s) 300
BbsI GAAGAC 2 cut(s) 47, 266
BccI CCATC 2 cut(s) 108, 181
BcgI CGANNNNNNTGC 2 cut(s) 288, 322
BciVI GTATCC 1 cut(s) 130
BcuI ACTAGT 1 cut(s) 263
BfaI CTAG 1 cut(s) 264
BfuI GTATCC 1 cut(s) 130
BmiI GGNNCC 1 cut(s) 250
BmsI GCATC 2 cut(s) 314, 423
BpiI GAAGAC 2 cut(s) 47, 266
Bsa29I ATCGAT 1 cut(s) 308
BsaAI YACGTR 1 cut(s) 420
BsaWI WCCGGW 1 cut(s) 115
Bse1I ACTGG 2 cut(s) 10, 406
BseCI ATCGAT 1 cut(s) 308
BseMII CTCAG 2 cut(s) 118, 328
BseNI ACTGG 2 cut(s) 10, 406
BsgI GTGCAG 1 cut(s) 9
BshNI GGYRCC 1 cut(s) 248
BshVI ATCGAT 1 cut(s) 308
BsiSI CCGG 1 cut(s) 116
BslFI GGGAC 1 cut(s) 350
BsmFI GGGAC 1 cut(s) 350
BspCNI CTCAG 2 cut(s) 117, 327
BspDI ATCGAT 1 cut(s) 308
BspLI GGNNCC 1 cut(s) 250
BspT107I GGYRCC 1 cut(s) 248
BsrI ACTGG 2 cut(s) 10, 406
BssSI CACGAG 1 cut(s) 300
Bst2BI CACGAG 1 cut(s) 300
Bst4CI ACNGT 1 cut(s) 248
BstBAI YACGTR 1 cut(s) 420
BstDEI CTNAG 2 cut(s) 104, 314
BstMWI GCNNNNNNNGC 1 cut(s) 18
BstNSI RCATGY 1 cut(s) 185
BstSNI TACGTA 1 cut(s) 420
BstV2I GAAGAC 2 cut(s) 47, 266
Bsu15I ATCGAT 1 cut(s) 308
BsuI GTATCC 1 cut(s) 130
BsuTUI ATCGAT 1 cut(s) 308
ClaI ATCGAT 1 cut(s) 308
Csp6I GTAC 3 cut(s) 220, 249, 421
CviAII CATG 2 cut(s) 182, 217
CviJI RGCY 4 cut(s) 12, 188, 213, 293
CviKI_1 RGCY 4 cut(s) 12, 188, 213, 293
CviQI GTAC 3 cut(s) 220, 249, 421
DdeI CTNAG 2 cut(s) 104, 314
Eco105I TACGTA 1 cut(s) 420
FaeI CATG 2 cut(s) 185, 220
FaiI YATR 4 cut(s) 183, 218, 396, 448
FaqI GGGAC 1 cut(s) 350
FatI CATG 2 cut(s) 181, 216
FspBI CTAG 1 cut(s) 264
HapII CCGG 1 cut(s) 116
Hin1II CATG 2 cut(s) 185, 220
HincII GTYRAC 2 cut(s) 39, 244
HindII GTYRAC 2 cut(s) 39, 244
HindIII AAGCTT 1 cut(s) 10
HinfI GANTC 1 cut(s) 310
HpaI GTTAAC 1 cut(s) 39
HpaII CCGG 1 cut(s) 116
HphI GGTGA 2 cut(s) 199, 395
Hpy166II GTNNAC 2 cut(s) 39, 244
Hpy188I TCNGA 3 cut(s) 94, 317, 346
Hpy188III TCNNGA 1 cut(s) 149
Hpy8I GTNNAC 2 cut(s) 39, 244
HpyAV CCTTC 1 cut(s) 219
HpyCH4III ACNGT 1 cut(s) 248
HpyCH4IV ACGT 1 cut(s) 419
HpyCH4V TGCA 1 cut(s) 26
HpyF10VI GCNNNNNNNGC 1 cut(s) 18
HpyF3I CTNAG 2 cut(s) 104, 314
HpySE526I ACGT 1 cut(s) 419
Hsp92II CATG 2 cut(s) 185, 220
KpnI GGTACC 1 cut(s) 252
KspAI GTTAAC 1 cut(s) 39
LmnI GCTCC 2 cut(s) 218, 234
LpnPI CCDG 6 cut(s) 36, 129, 162, 172, 223, 419
LweI GCATC 2 cut(s) 314, 423
MaeI CTAG 1 cut(s) 264
MaeII ACGT 1 cut(s) 419
MboII GAAGA 6 cut(s) 47, 55, 67, 271, 293, 296
MluCI AATT 3 cut(s) 276, 321, 426
MnlI CCTC 3 cut(s) 133, 193, 365
MseI TTAA 3 cut(s) 38, 429, 438
MspI CCGG 1 cut(s) 116
MwoI GCNNNNNNNGC 1 cut(s) 18
NlaIII CATG 2 cut(s) 185, 220
NlaIV GGNNCC 1 cut(s) 250
NspI RCATGY 1 cut(s) 185
PciI ACATGT 1 cut(s) 181
PfeI GAWTC 1 cut(s) 310
Ppu21I YACGTR 1 cut(s) 420
PscI ACATGT 1 cut(s) 181
PsiI TTATAA 1 cut(s) 448
PspN4I GGNNCC 1 cut(s) 250
RsaI GTAC 3 cut(s) 221, 250, 422
RsaNI GTAC 3 cut(s) 220, 249, 421
SaqAI TTAA 3 cut(s) 38, 429, 438
SfaNI GCATC 2 cut(s) 314, 423
SnaBI TACGTA 1 cut(s) 420
SpeI ACTAGT 1 cut(s) 263
Sse9I AATT 3 cut(s) 276, 321, 426
SspMI CTAG 1 cut(s) 264
TaaI ACNGT 1 cut(s) 248
TaiI ACGT 1 cut(s) 422
TaqI TCGA 2 cut(s) 176, 308
TasI AATT 3 cut(s) 276, 321, 426
TfiI GAWTC 1 cut(s) 310
Tru1I TTAA 3 cut(s) 38, 429, 438
Tru9I TTAA 3 cut(s) 38, 429, 438
XceI RCATGY 1 cut(s) 185
XspI CTAG 1 cut(s) 264
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.