Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0001482

Physical Location & Seq

Genomic Coordinates Forward (+)

19458259 .. 19462576

Gene Structure 4318 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g16070.6

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGGCATTTTCTCCGTGCTCCTCCCTTCCTGCAGTTGCTGCGATAACGTGTTTGATTGCGGTGGTTGTTGGTTGTTATTGGCCCGTTGAGGCCCGTATCCCGACCACCTTGGACGGCCCCTTTGAGCCCCTCACCGTCGCATTTGATCCCAGCTTGCGCGGCAACGCCGTCGATTTGCCTGATGATGATCACCGGGTCCATCGCCGGGTTAAAGGGTTTGAGCCCGAGCAGATTTCCGTCTCCCTCTCCGCCGATTACGACTCCGTCTGGATCTCCTGGATAACAGGGGAGTATCAGATTGGAGACAACATAAAGCCATTGGACCCCAAAAGTGTGCAAAGCATTGTTCAATATGCGGAGCTGAGGTATCCACCAACAAATGAAGCCTCAGGATATTCTCTTGTTTACAATCAGCTCTACCCTTTTGAAGGCCTCCAAAATTACACTTCCGGAATCATCCACCATGTTCGTCTCACAGGGTTGAAACCGAATACAGTGTATTTTTATCAATGTGGGGATCCTTCTATACCTGCAATGAGTGAAATCCACCATTTCAGGACTATGCCAGTTTCTGGTCCTCGGAGCTACCCAGAGAGAATAGCAGTTGTGGGAGACCTTGGCCTTACTTACAACACAACTACCACAATAAGTCACTTGACAAGTAACAACCCTGATCGATCCTTTTTTGTTCTATTGATTGGTGATGTTACATATGCAAACCTCTACCTGACAAATGGAACTGGATCCGACTGTTATTCTTGCTCATTTCCAAACTCTCCGATACATGAGACCTATCAGCCTAGATGGGATTACTGGGGAAGGTATATGCAGAGTTTAGTTTCCAAAGTTCCAATAATGGTGGTTGAAGGGAATCATGAAATAGAAGAACAGGCCGAAAATAAGACATTTGAGGCTTATAGCTCTCGGTTTGCATTCCCATCTGAAGAAAGTGGATCCTCGTCCACATTCTACTACTCATTTAATGCAGGGGGGATTCATTTTATAATGATTGGAGCCTACACTGACTTTAGCAAATCAGGGAAGCAATACAAGTGGCTGGAGCAAGATTTGGCTAATGTGGACAGATCCATAACTCCATGGCTGGTAGCTACTTGGCATCCACCCTGGTATAGTACCTATGAGGCCCATTATAGGGAGGCAGATTGTATGAGGATGGAAATGGAAGAGCTACTGTACTCCTATGGCGTCGATATAGTGTTCAATGGACATGTTCATGCCTACGAGAGGTCGAATCGAATTTATGATTACAACTTAGATCCCTCTGGTCCTGTATATCTCACCGTTGGTGACGGGGGTAATCGAGAGAAGATGGCAGTTCATCATGCTGATGAACCTGGTTATTGCCCAGAGCCATTAACTACTCCTGATGAACACCTAGGTGCAGGTGCCTTTTGTGCAGATAACTTTACCTCTGGCCCAGCAGCAGGTAAATTTTGTTGGGATCGGCAACCGGATTACAGTGCTTTCAGAGAAAGCAGCTTTGGCCATGGAATCCTTGAGGTGAAGAATGAGACTTGGGCTTTATGGACATGGTATCGGAACCAGGACTCTGACGATAAAATTGGAGATCAAATTTACATAGTGAGGCAACCAGATAAGTGCCGCTTCCGCTACATGTTGAAGAGTTGGATTGCTGACCTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009845 GO:0009846 GO:0009856 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0044237 GO:0044706 GO:0048856 GO:0051704 GO:0090351

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C OKR_DC_1 OKR_DC_1_C Pur_ac_phosph_N

Protein Analysis

555

Amino Acids

62.87

Weight (kDa)

5.0

Isoelectric Point (pI)

39.48

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001482)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07130 AT3G07130
fragaria_vesca	FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520
malus_domestica	MD04G1009700.v1.1 MD04G1009800.v1.1 MD05G1174000.v1.1 MD10G1161900.v1.1
prunus_persica	Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.8G201400_v2.0.a1
pyrus_communis	pycom04g00750 pycom04g00760 pycom05g16070 pycom10g13990
rosa_chinensis	RchiOBHm_Chr4g0415071 RchiOBHm_Chr6g0284551
rosa_laevigata	RLG00000008098 RLG00000012739
rosa_multiflora	Rmu_co8519847.1_g000001 Rmu_sc0001246.1_g000001 Rmu_sc0005257.1_g000004 Rmu_sc0042686.1_g000001
rosa_roxburghii	Rroxscaffold_5G00358850
rosa_rugosa	Rorug04G0132200 Rorug04G0132300 Rorug06G0164100
rosa_samantha	Rh4AG191700 Rh4BG189600 Rh4CG202400 Rh4DG190000 Rh6AG277300 Rh6BG277200 Rh6CG279400 Rh6DG271800
rosa_wichuraiana	Rw4G016280 Rw6G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1004
AarI	CACCTGC	1 cut(s)	1394
Acc36I	ACCTGC	3 cut(s)	538, 1394, 1436
AccB1I	GGYRCC	1 cut(s)	1406
AccB7I	CCANNNNNTGG	1 cut(s)	572
AccII	CGCG	1 cut(s)	159
AccIII	TCCGGA	1 cut(s)	449
AciI	CCGC	6 cut(s)	59, 159, 249, 356, 1624, 1630
AcoI	YGGCCR	1 cut(s)	1504
AcsI	RAATTY	3 cut(s)	1257, 1451, 1593
AcuI	CTGAAG	1 cut(s)	963
AcyI	GRCGYC	1 cut(s)	1206
AfaI	GTAC	2 cut(s)	1135, 1196
AfiI	CCNNNNNNNGG	7 cut(s)	205, 428, 572, 1152, 1153, 1245, 1445
AflIII	ACRYGT	3 cut(s)	47, 1228, 1635
AgsI	TTSAA	6 cut(s)	350, 428, 484, 866, 1222, 1642
AjnI	CCWGG	4 cut(s)	275, 1124, 1354, 1563
AjuI	GAANNNNNNNTTGG	2 cut(s)	1485, 1517
AleI	CACNNNNGTG	1 cut(s)	1398
AluBI	AGCT	8 cut(s)	153, 361, 415, 585, 921, 1109, 1189, 1500
AluI	AGCT	8 cut(s)	153, 361, 415, 585, 921, 1109, 1189, 1500
Alw21I	GWGCWC	1 cut(s)	20
Alw26I	GTCTC	6 cut(s)	244, 297, 476, 606, 782, 1526
AlwNI	CAGNNNCTG	2 cut(s)	38, 572
Ama87I	CYCGRG	1 cut(s)	224
Aor13HI	TCCGGA	1 cut(s)	449
AoxI	GGCC	9 cut(s)	80, 90, 115, 430, 619, 891, 1143, 1435, 1504
ApeKI	GCWGC	3 cut(s)	38, 1442, 1497
ApoI	RAATTY	3 cut(s)	1257, 1451, 1593
ArsI	GACNNNNNNTTYG	2 cut(s)	104, 136
AspA2I	CCTAGG	1 cut(s)	1396
AspLEI	GCGC	1 cut(s)	159
AspS9I	GGNCC	9 cut(s)	81, 91, 116, 196, 322, 575, 1144, 1286, 1436
AsuC2I	CCSGG	2 cut(s)	194, 206
AsuHPI	GGTGA	6 cut(s)	124, 182, 713, 1291, 1319, 1534
AvaI	CYCGRG	1 cut(s)	224
AvaII	GGWCC	4 cut(s)	196, 322, 575, 1286
AvrII	CCTAGG	1 cut(s)	1396
AxyI	CCTNAGG	1 cut(s)	388
BalI	TGGCCA	1 cut(s)	1506
BamHI	GGATCC	3 cut(s)	517, 743, 953
BanI	GGYRCC	1 cut(s)	1406
BanII	GRGCYC	2 cut(s)	129, 225
Bbv12I	GWGCWC	1 cut(s)	20
BbvCI	CCTCAGC	1 cut(s)	362
BbvI	GCAGC	3 cut(s)	25, 1454, 1509
BccI	CCATC	5 cut(s)	207, 798, 946, 1168, 1324
BceAI	ACGGC	2 cut(s)	130, 152
BcgI	CGANNNNNNTGC	2 cut(s)	151, 185
BciT130I	CCWGG	4 cut(s)	277, 1126, 1356, 1565
BciVI	GTATCC	2 cut(s)	107, 378
BclI	TGATCA	1 cut(s)	187
BcnI	CCSGG	2 cut(s)	194, 206
BcoDI	GTCTC	6 cut(s)	244, 297, 476, 606, 782, 1526
BfaI	CTAG	2 cut(s)	801, 1397
BfmI	CTRYAG	1 cut(s)	30
BfuAI	ACCTGC	3 cut(s)	538, 1394, 1436
BfuI	GTATCC	2 cut(s)	107, 378
BisI	GCNGC	5 cut(s)	39, 160, 1443, 1498, 1624
BlnI	CCTAGG	1 cut(s)	1396
BlsI	GCNGC	5 cut(s)	40, 161, 1444, 1499, 1625
Bme1390I	CCNGG	6 cut(s)	194, 206, 277, 1126, 1356, 1565
Bme18I	GGWCC	4 cut(s)	196, 322, 575, 1286
BmeT110I	CYCGRG	1 cut(s)	224
BmgT120I	GGNCC	9 cut(s)	81, 91, 116, 196, 322, 575, 1144, 1286, 1436
BmiI	GGNNCC	9 cut(s)	118, 197, 324, 519, 745, 955, 1015, 1408, 1562
BmrFI	CCNGG	6 cut(s)	194, 206, 277, 1126, 1356, 1565
BmrI	ACTGGG	1 cut(s)	823
BmsI	GCATC	1 cut(s)	1126
BmuI	ACTGGG	1 cut(s)	823
BpmI	CTGGAG	1 cut(s)	1079
Bpu10I	CCTNAGC	1 cut(s)	362
BpuEI	CTTGAG	1 cut(s)	1538
BpuMI	CCSGG	2 cut(s)	194, 206
Bsa29I	ATCGAT	1 cut(s)	676
BsaBI	GATNNNNATC	1 cut(s)	186
BsaHI	GRCGYC	1 cut(s)	1206
BsaI	GGTCTC	2 cut(s)	606, 782
BsaJI	CCNNGG	7 cut(s)	108, 578, 616, 1097, 1124, 1396, 1507
BsaWI	WCCGGW	2 cut(s)	449, 1471
BsaXI	ACNNNNNCTCC	2 cut(s)	350, 380
Bsc4I	CCNNNNNNNGG	7 cut(s)	205, 428, 572, 1152, 1153, 1245, 1445
Bse1I	ACTGG	3 cut(s)	566, 745, 818
Bse21I	CCTNAGG	1 cut(s)	388
Bse3DI	GCAATG	1 cut(s)	540
Bse8I	GATNNNNATC	1 cut(s)	186
BseAI	TCCGGA	1 cut(s)	449
BseBI	CCWGG	4 cut(s)	277, 1126, 1356, 1565
BseCI	ATCGAT	1 cut(s)	676
BseDI	CCNNGG	7 cut(s)	108, 578, 616, 1097, 1124, 1396, 1507
BseGI	GGATG	3 cut(s)	456, 1117, 1179
BseJI	GATNNNNATC	1 cut(s)	186
BseLI	CCNNNNNNNGG	7 cut(s)	205, 428, 572, 1152, 1153, 1245, 1445
BseMI	GCAATG	1 cut(s)	540
BseMII	CTCAG	2 cut(s)	353, 402
BseNI	ACTGG	3 cut(s)	566, 745, 818
BseRI	GAGGAG	1 cut(s)	10
BseXI	GCAGC	3 cut(s)	25, 1454, 1509
BseYI	CCCAGC	2 cut(s)	149, 1438
BsgI	GTGCAG	2 cut(s)	1422, 1437
Bsh1236I	CGCG	1 cut(s)	159
BshFI	GGCC	9 cut(s)	82, 92, 117, 432, 621, 893, 1145, 1437, 1506
BshNI	GGYRCC	1 cut(s)	1406
BshVI	ATCGAT	1 cut(s)	676
BsiHKAI	GWGCWC	1 cut(s)	20
BsiHKCI	CYCGRG	1 cut(s)	224
BsiSI	CCGG	4 cut(s)	193, 205, 450, 1472
BslI	CCNNNNNNNGG	7 cut(s)	205, 428, 572, 1152, 1153, 1245, 1445
BsmAI	GTCTC	6 cut(s)	244, 297, 476, 606, 782, 1526
BsmBI	CGTCTC	2 cut(s)	244, 476
BsmI	GAATGC	1 cut(s)	932
BsnI	GGCC	9 cut(s)	82, 92, 117, 432, 621, 893, 1145, 1437, 1506
Bso31I	GGTCTC	2 cut(s)	606, 782
BsoBI	CYCGRG	1 cut(s)	224
Bsp1286I	GDGCHC	3 cut(s)	20, 129, 225
Bsp13I	TCCGGA	1 cut(s)	449
Bsp19I	CCATGG	2 cut(s)	1097, 1507
BspACI	CCGC	6 cut(s)	59, 159, 249, 356, 1624, 1630
BspANI	GGCC	9 cut(s)	82, 92, 117, 432, 621, 893, 1145, 1437, 1506
BspCNI	CTCAG	2 cut(s)	354, 401
BspDI	ATCGAT	1 cut(s)	676
BspEI	TCCGGA	1 cut(s)	449
BspFNI	CGCG	1 cut(s)	159
BspHI	TCATGA	1 cut(s)	874
BspLI	GGNNCC	9 cut(s)	118, 197, 324, 519, 745, 955, 1015, 1408, 1562
BspMAI	CTGCAG	1 cut(s)	34
BspMI	ACCTGC	3 cut(s)	538, 1394, 1436
BspQI	GCTCTTC	1 cut(s)	1179
BspT107I	GGYRCC	1 cut(s)	1406
BspTNI	GGTCTC	2 cut(s)	606, 782
BsrDI	GCAATG	1 cut(s)	540
BsrI	ACTGG	3 cut(s)	566, 745, 818
BssECI	CCNNGG	7 cut(s)	108, 578, 616, 1097, 1124, 1396, 1507
BssNI	GRCGYC	1 cut(s)	1206
BssT1I	CCWWGG	5 cut(s)	108, 616, 1097, 1396, 1507
Bst2UI	CCWGG	4 cut(s)	277, 1126, 1356, 1565
Bst4CI	ACNGT	6 cut(s)	136, 496, 752, 1194, 1303, 1481
Bst6I	CTCTTC	2 cut(s)	1179, 1637
BstACI	GRCGYC	1 cut(s)	1206
BstAPI	GCANNNNNTGC	1 cut(s)	38
BstC8I	GCNNGC	1 cut(s)	155
BstDEI	CTNAG	3 cut(s)	362, 388, 1273
BstDSI	CCRYGG	2 cut(s)	1097, 1507
BstENI	CCTNNNNNAGG	2 cut(s)	426, 1243
BstF5I	GGATG	3 cut(s)	456, 1117, 1179
BstFNI	CGCG	1 cut(s)	159
BstHHI	GCGC	1 cut(s)	159
BstMAI	GTCTC	6 cut(s)	244, 297, 476, 606, 782, 1526
BstMWI	GCNNNNNNNGC	5 cut(s)	38, 159, 1415, 1503, 1629
BstNI	CCWGG	4 cut(s)	277, 1126, 1356, 1565
BstNSI	RCATGY	2 cut(s)	1232, 1639
BstSCI	CCNGG	6 cut(s)	192, 204, 275, 1124, 1354, 1563
BstSFI	CTRYAG	1 cut(s)	30
BstUI	CGCG	1 cut(s)	159
BstV1I	GCAGC	3 cut(s)	25, 1454, 1509
BstX2I	RGATCY	6 cut(s)	270, 517, 743, 953, 1085, 1276
BstYI	RGATCY	6 cut(s)	270, 517, 743, 953, 1085, 1276
Bsu15I	ATCGAT	1 cut(s)	676
Bsu36I	CCTNAGG	1 cut(s)	388
BsuI	GTATCC	2 cut(s)	107, 378
BsuRI	GGCC	9 cut(s)	82, 92, 117, 432, 621, 893, 1145, 1437, 1506
BsuTUI	ATCGAT	1 cut(s)	676
BtgI	CCRYGG	2 cut(s)	1097, 1507
BtgZI	GCGATG	1 cut(s)	185
BtsCI	GGATG	3 cut(s)	456, 1117, 1179
BtsIMutI	CAGTG	3 cut(s)	501, 1020, 1486
BveI	ACCTGC	3 cut(s)	538, 1394, 1436
Cac8I	GCNNGC	1 cut(s)	155
CaiI	CAGNNNCTG	2 cut(s)	38, 572
CciI	TCATGA	1 cut(s)	874
CfoI	GCGC	1 cut(s)	159
Cfr13I	GGNCC	9 cut(s)	81, 91, 116, 196, 322, 575, 1144, 1286, 1436
ClaI	ATCGAT	1 cut(s)	676
CseI	GACGC	1 cut(s)	1195
CsiI	ACCWGGT	1 cut(s)	1354
Csp6I	GTAC	2 cut(s)	1134, 1195
CspCI	CAANNNNNGTGG	4 cut(s)	840, 875, 1034, 1069
CviQI	GTAC	2 cut(s)	1134, 1195
DdeI	CTNAG	3 cut(s)	362, 388, 1273
EaeI	YGGCCR	1 cut(s)	1504
Eam1104I	CTCTTC	2 cut(s)	1179, 1637
EarI	CTCTTC	2 cut(s)	1179, 1637
EciI	GGCGGA	1 cut(s)	238
Eco130I	CCWWGG	5 cut(s)	108, 616, 1097, 1396, 1507
Eco147I	AGGCCT	1 cut(s)	432
Eco24I	GRGCYC	2 cut(s)	129, 225
Eco31I	GGTCTC	2 cut(s)	606, 782
Eco47I	GGWCC	4 cut(s)	196, 322, 575, 1286
Eco57I	CTGAAG	1 cut(s)	963
Eco81I	CCTNAGG	1 cut(s)	388
Eco88I	CYCGRG	1 cut(s)	224
EcoNI	CCTNNNNNAGG	2 cut(s)	426, 1243
EcoRII	CCWGG	4 cut(s)	275, 1124, 1354, 1563
EcoT14I	CCWWGG	5 cut(s)	108, 616, 1097, 1396, 1507
EcoT38I	GRGCYC	2 cut(s)	129, 225
ErhI	CCWWGG	5 cut(s)	108, 616, 1097, 1396, 1507
Esp3I	CGTCTC	2 cut(s)	244, 476
FalI	AAGNNNNNCTT	2 cut(s)	1610, 1642
FauNDI	CATATG	1 cut(s)	712
FbaI	TGATCA	1 cut(s)	187
Fnu4HI	GCNGC	5 cut(s)	39, 160, 1443, 1498, 1624
FokI	GGATG	3 cut(s)	443, 1104, 1186
FriOI	GRGCYC	2 cut(s)	129, 225
Fsp4HI	GCNGC	5 cut(s)	39, 160, 1443, 1498, 1624
FspBI	CTAG	2 cut(s)	801, 1397
GlaI	GCGC	1 cut(s)	158
GluI	GCNGC	5 cut(s)	39, 160, 1443, 1498, 1624
GsaI	CCCAGC	2 cut(s)	153, 1442
GsuI	CTGGAG	1 cut(s)	1079
HaeIII	GGCC	9 cut(s)	82, 92, 117, 432, 621, 893, 1145, 1437, 1506
HapII	CCGG	4 cut(s)	193, 205, 450, 1472
HgaI	GACGC	1 cut(s)	1195
HhaI	GCGC	1 cut(s)	159
Hin1I	GRCGYC	1 cut(s)	1206
Hin6I	GCGC	1 cut(s)	157
HinP1I	GCGC	1 cut(s)	157
HinfI	GANTC	7 cut(s)	260, 453, 871, 994, 1252, 1512, 1568
HpaII	CCGG	4 cut(s)	193, 205, 450, 1472
HphI	GGTGA	6 cut(s)	124, 182, 713, 1291, 1319, 1534
Hpy166II	GTNNAC	3 cut(s)	406, 963, 1081
Hpy188I	TCNGA	8 cut(s)	297, 582, 748, 780, 943, 1490, 1560, 1573
Hpy188III	TCNNGA	8 cut(s)	100, 268, 390, 450, 556, 875, 1322, 1385
Hpy8I	GTNNAC	3 cut(s)	406, 963, 1081
Hpy99I	CGWCG	3 cut(s)	140, 173, 1211
HpyAV	CCTTC	5 cut(s)	35, 422, 531, 813, 860
HpyCH4III	ACNGT	6 cut(s)	136, 496, 752, 1194, 1303, 1481
HpyCH4IV	ACGT	1 cut(s)	47
HpyCH4V	TGCA	9 cut(s)	32, 337, 533, 716, 829, 932, 986, 1403, 1418
HpyF10VI	GCNNNNNNNGC	5 cut(s)	38, 159, 1415, 1503, 1629
HpyF3I	CTNAG	3 cut(s)	362, 388, 1273
HpySE526I	ACGT	1 cut(s)	47
Hsp92I	GRCGYC	1 cut(s)	1206
HspAI	GCGC	1 cut(s)	157
Kpn2I	TCCGGA	1 cut(s)	449
Ksp22I	TGATCA	1 cut(s)	187
LguI	GCTCTTC	1 cut(s)	1179
LmnI	GCTCC	5 cut(s)	23, 358, 582, 1013, 1060
Lsp1109I	GCAGC	3 cut(s)	25, 1454, 1509
LweI	GCATC	1 cut(s)	1126
MabI	ACCWGGT	1 cut(s)	1354
MaeI	CTAG	2 cut(s)	801, 1397
MaeII	ACGT	1 cut(s)	47
MaeIII	GTNAC	4 cut(s)	650, 662, 706, 1307
MboII	GAAGA	6 cut(s)	896, 956, 1196, 1339, 1537, 1654
MflI	RGATCY	6 cut(s)	270, 517, 743, 953, 1085, 1276
MhlI	GDGCHC	3 cut(s)	20, 129, 225
MlsI	TGGCCA	1 cut(s)	1506
MluCI	AATT	5 cut(s)	439, 1257, 1451, 1581, 1593
MluNI	TGGCCA	1 cut(s)	1506
MlyI	GAGTC	2 cut(s)	254, 1562
MmeI	TCCRAC	2 cut(s)	771, 1628
Mox20I	TGGCCA	1 cut(s)	1506
MroI	TCCGGA	1 cut(s)	449
MscI	TGGCCA	1 cut(s)	1506
MseI	TTAA	3 cut(s)	210, 981, 1376
MslI	CAYNNNNRTG	3 cut(s)	1233, 1347, 1398
Msp20I	TGGCCA	1 cut(s)	1506
MspI	CCGG	4 cut(s)	193, 205, 450, 1472
MspR9I	CCNGG	6 cut(s)	194, 206, 277, 1126, 1356, 1565
Mva1269I	GAATGC	1 cut(s)	932
MvaI	CCWGG	4 cut(s)	277, 1126, 1356, 1565
MvnI	CGCG	1 cut(s)	159
MwoI	GCNNNNNNNGC	5 cut(s)	38, 159, 1415, 1503, 1629
NciI	CCSGG	2 cut(s)	194, 206
NcoI	CCATGG	2 cut(s)	1097, 1507
NdeI	CATATG	1 cut(s)	712
NlaIV	GGNNCC	9 cut(s)	118, 197, 324, 519, 745, 955, 1015, 1408, 1562
NmuCI	GTSAC	2 cut(s)	650, 1307
NspI	RCATGY	2 cut(s)	1232, 1639
OliI	CACNNNNGTG	1 cut(s)	1398
PagI	TCATGA	1 cut(s)	874
PaqCI	CACCTGC	1 cut(s)	1394
PceI	AGGCCT	1 cut(s)	432
PciI	ACATGT	2 cut(s)	1228, 1635
PciSI	GCTCTTC	1 cut(s)	1179
PctI	GAATGC	1 cut(s)	932
PfeI	GAWTC	5 cut(s)	453, 871, 994, 1252, 1512
PflFI	GACNNNGTC	1 cut(s)	263
PflMI	CCANNNNNTGG	1 cut(s)	572
PfoI	TCCNGGA	1 cut(s)	275
PkrI	GCNGC	5 cut(s)	40, 161, 1444, 1499, 1625
PleI	GAGTC	2 cut(s)	254, 1562
PpsI	GAGTC	2 cut(s)	254, 1562
PscI	ACATGT	2 cut(s)	1228, 1635
PsiI	TTATAA	1 cut(s)	1004
Psp6I	CCWGG	4 cut(s)	275, 1124, 1354, 1563
PspFI	CCCAGC	2 cut(s)	149, 1438
PspGI	CCWGG	4 cut(s)	275, 1124, 1354, 1563
PspN4I	GGNNCC	9 cut(s)	118, 197, 324, 519, 745, 955, 1015, 1408, 1562
PspPI	GGNCC	9 cut(s)	81, 91, 116, 196, 322, 575, 1144, 1286, 1436
PstI	CTGCAG	1 cut(s)	34
PstNI	CAGNNNCTG	2 cut(s)	38, 572
PsuI	RGATCY	6 cut(s)	270, 517, 743, 953, 1085, 1276
PsyI	GACNNNGTC	1 cut(s)	263
RsaI	GTAC	2 cut(s)	1135, 1196
RsaNI	GTAC	2 cut(s)	1134, 1195
RseI	CAYNNNNRTG	3 cut(s)	1233, 1347, 1398
SapI	GCTCTTC	1 cut(s)	1179
SaqAI	TTAA	3 cut(s)	210, 981, 1376
SatI	GCNGC	5 cut(s)	39, 160, 1443, 1498, 1624
Sau96I	GGNCC	9 cut(s)	81, 91, 116, 196, 322, 575, 1144, 1286, 1436
SchI	GAGTC	2 cut(s)	254, 1562
ScrFI	CCNGG	6 cut(s)	194, 206, 277, 1126, 1356, 1565
SduI	GDGCHC	3 cut(s)	20, 129, 225
SexAI	ACCWGGT	1 cut(s)	1354
SfaNI	GCATC	1 cut(s)	1126
SfcI	CTRYAG	1 cut(s)	30
SinI	GGWCC	4 cut(s)	196, 322, 575, 1286
SmiMI	CAYNNNNRTG	3 cut(s)	1233, 1347, 1398
SmlI	CTYRAG	1 cut(s)	1517
SmoI	CTYRAG	1 cut(s)	1517
Sse9I	AATT	5 cut(s)	439, 1257, 1451, 1581, 1593
SseBI	AGGCCT	1 cut(s)	432
SsiI	CCGC	6 cut(s)	59, 159, 249, 356, 1624, 1630
SspMI	CTAG	2 cut(s)	801, 1397
StuI	AGGCCT	1 cut(s)	432
StyD4I	CCNGG	6 cut(s)	192, 204, 275, 1124, 1354, 1563
StyI	CCWWGG	5 cut(s)	108, 616, 1097, 1396, 1507
TaaI	ACNGT	6 cut(s)	136, 496, 752, 1194, 1303, 1481
TaiI	ACGT	1 cut(s)	50
TaqI	TCGA	6 cut(s)	171, 676, 1209, 1250, 1255, 1321
TasI	AATT	5 cut(s)	439, 1257, 1451, 1581, 1593
TatI	WGTACW	1 cut(s)	1194
TauI	GCSGC	2 cut(s)	162, 1626
TfiI	GAWTC	5 cut(s)	453, 871, 994, 1252, 1512
Tru1I	TTAA	3 cut(s)	210, 981, 1376
Tru9I	TTAA	3 cut(s)	210, 981, 1376
TscAI	CASTG	3 cut(s)	501, 1027, 1486
TseFI	GTSAC	2 cut(s)	650, 1307
TseI	GCWGC	3 cut(s)	38, 1442, 1497
Tsp45I	GTSAC	2 cut(s)	650, 1307
TspDTI	ATGAA	7 cut(s)	396, 891, 986, 1223, 1328, 1365, 1404
TspGWI	ACGGA	2 cut(s)	226, 253
TspRI	CASTG	3 cut(s)	501, 1027, 1486
Tth111I	GACNNNGTC	1 cut(s)	263
Van91I	CCANNNNNTGG	1 cut(s)	572
VpaK11BI	GGWCC	4 cut(s)	196, 322, 575, 1286
XagI	CCTNNNNNAGG	2 cut(s)	426, 1243
XapI	RAATTY	3 cut(s)	1257, 1451, 1593
XceI	RCATGY	2 cut(s)	1232, 1639
XmaJI	CCTAGG	1 cut(s)	1396
XspI	CTAG	2 cut(s)	801, 1397

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.