Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0001482

Physical Location & Seq

Genomic Coordinates Forward (+)

37396272 .. 37400764

Gene Structure 4493 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG190000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1644 bp

ATGGGATTGTTCCCATTGGCCACAGAAGTAGCACTACTCTTGGTTCTGCTCCCACAGTTCAGCTTCTTCACATTTGTTCATGGAGAAATTCCAACCACACTTGATGGGCCCTTCAAGCCTGTCACCGTCCCAGTTGACACAAGCTTTCGAGGCAATGCCGTTGACTTGCCAGACTCTGATCCTCGACTTCGAAGAATCGTCAAAGGGTTCGAGCCTGAACAAATCTCTGTCTCCCTCTCTGCAACCCATGACTCTGTTTGGATATCTTGGATCACAGGGGAATTTCAAATTGGGGATGACATAACGCCATTGGATCCGGACACTGTTGCAAGTGTTGTTGTATATGGAAGGTATGAATATCCCATGACTAATCAATCGACGGGGTATTCTCTGGTTTACAATCAGCTTTATGAGCTTGAAGGCCTTCAAAACTACACTTCTGGAATTATACATCATGTTTGTCTCACAGGTCTGATGCCCAACACCCTGTATCAATATCAATGTGGAGATCCTTCTATTCCAGCAATGAGCGATGTTTCTTATTTCCAGACTATGCCAGTATCTGGGCCCGAGAGTTATCCTAGCAGAATAGCTGTGGTGGGGGACCTAGGTCTGACATATAACACCACCTCAACAGTTGATCATTTGTTGATCAACCATCCTGATCTTCTTTTATTGGTGGGGGATGTTAGTGATGCTAACCTGTATTTTACAAATGGAACTGCGGATCATTGCTTTCATGAGCAAACTTATCAGCCTCGTTGGGATTACTGGGGAAGGTACATGCAGCCTCTAGTGTCCAAAGTTCCAGTAATGGTAGTAGAAGGGGACCATGAGATTGAGAAACAGGCTGGAAATCAAATGTTTGCTGCTTACAGTTCCCGATTTGCATTCCCCTTGGAAGAGAGTGGATCATCATCTTCGTTATTCTATTCTTTCAATGCAGGGGGGATACACTTTGTAATGCTTGGTGCCTACACATCTTATGAGAAATCAGGGGACCAGTATAACTGGTTGGAGCTAGATCTGGCTAATGTTGACAGAAATGTGACTCCATGGTTGGTAGCTGCATGGCACCCACCATGGTACAGCACCTACACGGCACATTACAGAGAAGCAGAGTGCATGAGAGTTGAGCTGGAAGACATACTTTATGAGTATGGTGTTGATATCGTCTTCAATGGCCATGTTCATGCATATGAGAGGTCAAATCGAGTATACAACTATACTTTAGATCCTTGTGGTCCTATTTATATCACAGTTGGTGATGGCGGTAACGGTGAGATGATGGATATTGCACACTCTGATGAACCTGGAAACTGCCCACAACCATCTACGATGCTGGGTCAAAATATGGAATATTTTTGTGCATTTAATTTCACTTCAGGCCCGGCAGCAGGAAAATTCTGTTGGGATGAGCAACCTGAGTATAGCGCATATAGAGAAAGTAGCTTTGGGCATGGACTTCTAGAGGTAATTCCTTTTCTCTTCGCTACAAAAACTCAAACTTTGAGAGTGCAGATCAAAGGAAAATTGATACAAATGAGCTGCAAAAGTCTTTCGTTTACTACTGCATTTGGGATGGTAAGAACCACTAGTGCAGTTTGTATGGTGAAAAGTGAGACTTCAAGTAGTAAATCATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003674 GO:0003824 GO:0003993 GO:0006793 GO:0006796 GO:0007275 GO:0008150 GO:0008152 GO:0009791 GO:0009845 GO:0009846 GO:0009856 GO:0009987 GO:0016311 GO:0016787 GO:0016788 GO:0016791 GO:0022414 GO:0032501 GO:0032502 GO:0042578 GO:0044237 GO:0044706 GO:0048856 GO:0051704 GO:0090351

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

547

Amino Acids

61.17

Weight (kDa)

4.7

Isoelectric Point (pI)

30.31

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pur_ac_phosph_N	PF16656	72 - 184	8.8e-14	Purple acid Phosphatase, N-terminal domain
Metallophos	PF00149	196 - 400	1.4e-20	Calcineurin-like phosphoesterase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001482)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07130 AT3G07130
fragaria_vesca	FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_2g18800 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520 FvH4_4g16520
malus_domestica	MD04G1009700.v1.1 MD04G1009800.v1.1 MD05G1174000.v1.1 MD10G1161900.v1.1
prunus_persica	Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.1G008900_v2.0.a1 Prupe.8G201400_v2.0.a1
pyrus_communis	pycom04g00750 pycom04g00760 pycom05g16070 pycom10g13990
rosa_chinensis	RchiOBHm_Chr4g0415071 RchiOBHm_Chr6g0284551
rosa_laevigata	RLG00000008098 RLG00000012739
rosa_multiflora	Rmu_co8519847.1_g000001 Rmu_sc0001246.1_g000001 Rmu_sc0005257.1_g000004 Rmu_sc0042686.1_g000001
rosa_roxburghii	Rroxscaffold_5G00358850
rosa_rugosa	Rorug04G0132200 Rorug04G0132300 Rorug06G0164100
rosa_samantha	Rh4AG191700 Rh4BG189600 Rh4CG202400 Rh4DG190000 Rh6AG277300 Rh6BG277200 Rh6CG279400 Rh6DG271800
rosa_wichuraiana	Rw4G016280 Rw6G023810

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	971, 1074
AccB7I	CCANNNNNTGG	1 cut(s)	563
AccI	GTMKAC	1 cut(s)	1218
AccIII	TCCGGA	1 cut(s)	316
AciI	CCGC	2 cut(s)	725, 1272
AclWI	GGATC	8 cut(s)	173, 278, 308, 321, 503, 735, 919, 1229
AcoI	YGGCCR	2 cut(s)	18, 1183
AcsI	RAATTY	3 cut(s)	87, 281, 1403
AcuI	CTGAAG	1 cut(s)	1368
AfaI	GTAC	2 cut(s)	782, 1088
AfiI	CCNNNNNNNGG	2 cut(s)	563, 1397
AgsI	TTSAA	7 cut(s)	115, 287, 419, 428, 940, 1180, 1629
AhlI	ACTAGT	1 cut(s)	1595
AjnI	CCWGG	1 cut(s)	1312
AjuI	GAANNNNNNNTTGG	6 cut(s)	273, 305, 1393, 1425, 1437, 1469
Alw26I	GTCTC	3 cut(s)	235, 467, 1616
AlwI	GGATC	8 cut(s)	173, 278, 308, 321, 503, 735, 919, 1229
AlwNI	CAGNNNCTG	2 cut(s)	176, 563
Ama87I	CYCGRG	1 cut(s)	569
Aor13HI	TCCGGA	1 cut(s)	316
AoxI	GGCC	6 cut(s)	18, 107, 421, 566, 1183, 1387
ApaI	GGGCCC	2 cut(s)	111, 570
ApeKI	GCWGC	5 cut(s)	787, 869, 1067, 1394, 1548
ApoI	RAATTY	3 cut(s)	87, 281, 1403
Asp700I	GAANNNNTTC	1 cut(s)	423
AspA2I	CCTAGG	1 cut(s)	607
AspLEI	GCGC	1 cut(s)	1436
AspS9I	GGNCC	9 cut(s)	107, 108, 566, 567, 604, 829, 1000, 1244, 1388
AsuC2I	CCSGG	1 cut(s)	1391
AsuHPI	GGTGA	4 cut(s)	115, 1277, 1292, 1624
AsuII	TTCGAA	1 cut(s)	190
AvaI	CYCGRG	1 cut(s)	569
AvaII	GGWCC	4 cut(s)	604, 829, 1000, 1244
AvrII	CCTAGG	1 cut(s)	607
BaeGI	GKGCMC	2 cut(s)	111, 570
BalI	TGGCCA	2 cut(s)	20, 1185
BamHI	GGATCC	1 cut(s)	313
BanI	GGYRCC	2 cut(s)	971, 1074
BanII	GRGCYC	2 cut(s)	111, 570
BarI	GAAGNNNNNNTAC	2 cut(s)	18, 50
BbsI	GAAGAC	2 cut(s)	1149, 1168
BbvI	GCAGC	5 cut(s)	799, 856, 1054, 1406, 1535
BccI	CCATC	6 cut(s)	98, 666, 1262, 1282, 1339, 1576
BceAI	ACGGC	2 cut(s)	143, 1116
BciT130I	CCWGG	1 cut(s)	1314
BciVI	GTATCC	1 cut(s)	945
BclI	TGATCA	2 cut(s)	640, 651
BcnI	CCSGG	1 cut(s)	1391
BcoDI	GTCTC	3 cut(s)	235, 467, 1616
BcuI	ACTAGT	1 cut(s)	1595
BfaI	CTAG	6 cut(s)	582, 608, 794, 1022, 1469, 1596
BfuI	GTATCC	1 cut(s)	945
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	5 cut(s)	788, 870, 1068, 1395, 1549
BlnI	CCTAGG	1 cut(s)	607
BlsI	GCNGC	5 cut(s)	789, 871, 1069, 1396, 1550
Bme1390I	CCNGG	2 cut(s)	1314, 1391
Bme18I	GGWCC	4 cut(s)	604, 829, 1000, 1244
BmeT110I	CYCGRG	1 cut(s)	569
BmgT120I	GGNCC	9 cut(s)	107, 108, 566, 567, 604, 829, 1000, 1244, 1388
BmiI	GGNNCC	8 cut(s)	109, 315, 568, 605, 830, 973, 1001, 1076
BmrFI	CCNGG	2 cut(s)	1314, 1391
BmrI	ACTGGG	2 cut(s)	125, 781
BmsI	GCATC	3 cut(s)	465, 685, 1329
BmuI	ACTGGG	2 cut(s)	125, 781
BoxI	GACNNNNGTC	1 cut(s)	609
BpiI	GAAGAC	2 cut(s)	1149, 1168
Bpu14I	TTCGAA	1 cut(s)	190
BpuMI	CCSGG	1 cut(s)	1391
BsaBI	GATNNNNATC	1 cut(s)	916
BsaJI	CCNNGG	4 cut(s)	607, 897, 1055, 1082
BsaWI	WCCGGW	1 cut(s)	316
Bsc4I	CCNNNNNNNGG	2 cut(s)	563, 1397
Bse1I	ACTGG	6 cut(s)	131, 557, 776, 809, 1003, 1016
Bse3DI	GCAATG	3 cut(s)	160, 531, 730
Bse8I	GATNNNNATC	1 cut(s)	916
BseAI	TCCGGA	1 cut(s)	316
BseBI	CCWGG	1 cut(s)	1314
BseDI	CCNNGG	4 cut(s)	607, 897, 1055, 1082
BseGI	GGATG	5 cut(s)	301, 658, 691, 1420, 1587
BseJI	GATNNNNATC	1 cut(s)	916
BseLI	CCNNNNNNNGG	2 cut(s)	563, 1397
BseMI	GCAATG	3 cut(s)	160, 531, 730
BseMII	CTCAG	1 cut(s)	1416
BseNI	ACTGG	6 cut(s)	131, 557, 776, 809, 1003, 1016
BseSI	GKGCMC	2 cut(s)	111, 570
BseXI	GCAGC	5 cut(s)	799, 856, 1054, 1406, 1535
BseYI	CCCAGC	1 cut(s)	1342
BsgI	GTGCAG	2 cut(s)	1538, 1620
BshFI	GGCC	6 cut(s)	20, 109, 423, 568, 1185, 1389
BshNI	GGYRCC	2 cut(s)	971, 1074
BsiHKCI	CYCGRG	1 cut(s)	569
BsiSI	CCGG	2 cut(s)	317, 1391
BslFI	GGGAC	4 cut(s)	113, 617, 842, 1013
BslI	CCNNNNNNNGG	2 cut(s)	563, 1397
BsmAI	GTCTC	3 cut(s)	235, 467, 1616
BsmFI	GGGAC	4 cut(s)	113, 617, 842, 1013
BsmI	GAATGC	1 cut(s)	890
BsnI	GGCC	6 cut(s)	20, 109, 423, 568, 1185, 1389
BsoBI	CYCGRG	1 cut(s)	569
Bsp119I	TTCGAA	1 cut(s)	190
Bsp120I	GGGCCC	2 cut(s)	107, 566
Bsp1286I	GDGCHC	2 cut(s)	111, 570
Bsp13I	TCCGGA	1 cut(s)	316
Bsp19I	CCATGG	2 cut(s)	1055, 1082
BspACI	CCGC	2 cut(s)	725, 1272
BspANI	GGCC	6 cut(s)	20, 109, 423, 568, 1185, 1389
BspCNI	CTCAG	1 cut(s)	1417
BspEI	TCCGGA	1 cut(s)	316
BspHI	TCATGA	1 cut(s)	739
BspLI	GGNNCC	8 cut(s)	109, 315, 568, 605, 830, 973, 1001, 1076
BspPI	GGATC	8 cut(s)	173, 278, 308, 321, 503, 735, 919, 1229
BspT104I	TTCGAA	1 cut(s)	190
BspT107I	GGYRCC	2 cut(s)	971, 1074
BsrDI	GCAATG	3 cut(s)	160, 531, 730
BsrI	ACTGG	6 cut(s)	131, 557, 776, 809, 1003, 1016
BssECI	CCNNGG	4 cut(s)	607, 897, 1055, 1082
BssNAI	GTATAC	1 cut(s)	1219
BssT1I	CCWWGG	4 cut(s)	607, 897, 1055, 1082
Bst1107I	GTATAC	1 cut(s)	1219
Bst2UI	CCWGG	1 cut(s)	1314
Bst4CI	ACNGT	7 cut(s)	57, 127, 325, 637, 878, 1261, 1280
Bst6I	CTCTTC	2 cut(s)	897, 1493
BstBI	TTCGAA	1 cut(s)	190
BstDEI	CTNAG	1 cut(s)	1425
BstDSI	CCRYGG	2 cut(s)	1055, 1082
BstF5I	GGATG	5 cut(s)	301, 658, 691, 1420, 1587
BstHHI	GCGC	1 cut(s)	1436
BstMAI	GTCTC	3 cut(s)	235, 467, 1616
BstMWI	GCNNNNNNNGC	3 cut(s)	115, 150, 412
BstNI	CCWGG	1 cut(s)	1314
BstNSI	RCATGY	1 cut(s)	787
BstPAI	GACNNNNGTC	1 cut(s)	609
BstSCI	CCNGG	2 cut(s)	1312, 1389
BstSLI	GKGCMC	2 cut(s)	111, 570
BstV1I	GCAGC	5 cut(s)	799, 856, 1054, 1406, 1535
BstV2I	GAAGAC	2 cut(s)	1149, 1168
BstX2I	RGATCY	4 cut(s)	313, 508, 1024, 1234
BstYI	RGATCY	4 cut(s)	313, 508, 1024, 1234
BstZ17I	GTATAC	1 cut(s)	1219
BsuI	GTATCC	1 cut(s)	945
BsuRI	GGCC	6 cut(s)	20, 109, 423, 568, 1185, 1389
BtgI	CCRYGG	2 cut(s)	1055, 1082
BtgZI	GCGATG	1 cut(s)	546
BtsCI	GGATG	5 cut(s)	301, 658, 691, 1420, 1587
BtsIMutI	CAGTG	1 cut(s)	321
CaiI	CAGNNNCTG	2 cut(s)	176, 563
CciI	TCATGA	1 cut(s)	739
CfoI	GCGC	1 cut(s)	1436
Cfr13I	GGNCC	9 cut(s)	107, 108, 566, 567, 604, 829, 1000, 1244, 1388
Csp6I	GTAC	2 cut(s)	781, 1087
CviQI	GTAC	2 cut(s)	781, 1087
DdeI	CTNAG	1 cut(s)	1425
EaeI	YGGCCR	2 cut(s)	18, 1183
Eam1104I	CTCTTC	2 cut(s)	897, 1493
EarI	CTCTTC	2 cut(s)	897, 1493
Eco130I	CCWWGG	4 cut(s)	607, 897, 1055, 1082
Eco147I	AGGCCT	1 cut(s)	423
Eco24I	GRGCYC	2 cut(s)	111, 570
Eco32I	GATATC	2 cut(s)	264, 1171
Eco47I	GGWCC	4 cut(s)	604, 829, 1000, 1244
Eco57I	CTGAAG	1 cut(s)	1368
Eco88I	CYCGRG	1 cut(s)	569
EcoO109I	RGGNCCY	2 cut(s)	108, 604
EcoRII	CCWGG	1 cut(s)	1312
EcoRV	GATATC	2 cut(s)	264, 1171
EcoT14I	CCWWGG	4 cut(s)	607, 897, 1055, 1082
EcoT22I	ATGCAT	1 cut(s)	1198
EcoT38I	GRGCYC	2 cut(s)	111, 570
ErhI	CCWWGG	4 cut(s)	607, 897, 1055, 1082
FalI	AAGNNNNNCTT	4 cut(s)	1134, 1166, 1609, 1641
FaqI	GGGAC	4 cut(s)	113, 617, 842, 1013
FauNDI	CATATG	1 cut(s)	1198
FbaI	TGATCA	2 cut(s)	640, 651
FblI	GTMKAC	1 cut(s)	1218
Fnu4HI	GCNGC	5 cut(s)	788, 870, 1068, 1395, 1549
FokI	GGATG	5 cut(s)	308, 645, 698, 1427, 1594
FriOI	GRGCYC	2 cut(s)	111, 570
Fsp4HI	GCNGC	5 cut(s)	788, 870, 1068, 1395, 1549
FspBI	CTAG	6 cut(s)	582, 608, 794, 1022, 1469, 1596
GlaI	GCGC	1 cut(s)	1435
GluI	GCNGC	5 cut(s)	788, 870, 1068, 1395, 1549
GsaI	CCCAGC	1 cut(s)	1346
HaeIII	GGCC	6 cut(s)	20, 109, 423, 568, 1185, 1389
HapII	CCGG	2 cut(s)	317, 1391
HhaI	GCGC	1 cut(s)	1436
Hin6I	GCGC	1 cut(s)	1434
HinP1I	GCGC	1 cut(s)	1434
HincII	GTYRAC	3 cut(s)	136, 163, 1039
HindII	GTYRAC	3 cut(s)	136, 163, 1039
HindIII	AAGCTT	1 cut(s)	142
HinfI	GANTC	4 cut(s)	173, 195, 251, 1051
HpaII	CCGG	2 cut(s)	317, 1391
HphI	GGTGA	4 cut(s)	115, 1277, 1292, 1624
Hpy166II	GTNNAC	6 cut(s)	136, 163, 397, 1039, 1219, 1566
Hpy188I	TCNGA	4 cut(s)	178, 474, 615, 1306
Hpy188III	TCNNGA	7 cut(s)	317, 441, 547, 662, 740, 882, 1469
Hpy8I	GTNNAC	6 cut(s)	136, 163, 397, 1039, 1219, 1566
Hpy99I	CGWCG	1 cut(s)	382
HpyAV	CCTTC	7 cut(s)	121, 342, 413, 434, 522, 771, 818
HpyCH4III	ACNGT	7 cut(s)	57, 127, 325, 637, 878, 1261, 1280
HpyF10VI	GCNNNNNNNGC	3 cut(s)	115, 150, 412
HpyF3I	CTNAG	1 cut(s)	1425
HspAI	GCGC	1 cut(s)	1434
Kpn2I	TCCGGA	1 cut(s)	316
Ksp22I	TGATCA	2 cut(s)	640, 651
LmnI	GCTCC	2 cut(s)	54, 1018
Lsp1109I	GCAGC	5 cut(s)	799, 856, 1054, 1406, 1535
LweI	GCATC	3 cut(s)	465, 685, 1329
MaeI	CTAG	6 cut(s)	582, 608, 794, 1022, 1469, 1596
MaeIII	GTNAC	3 cut(s)	121, 1048, 1274
MboII	GAAGA	8 cut(s)	58, 204, 659, 912, 914, 1154, 1168, 1480
MflI	RGATCY	4 cut(s)	313, 508, 1024, 1234
MhlI	GDGCHC	2 cut(s)	111, 570
MlsI	TGGCCA	2 cut(s)	20, 1185
MluCI	AATT	8 cut(s)	87, 281, 288, 444, 1375, 1403, 1476, 1532
MluNI	TGGCCA	2 cut(s)	20, 1185
MlyI	GAGTC	3 cut(s)	167, 245, 1045
MmeI	TCCRAC	2 cut(s)	116, 996
MnlI	CCTC	8 cut(s)	143, 192, 245, 640, 768, 801, 1197, 1465
Mox20I	TGGCCA	2 cut(s)	20, 1185
Mph1103I	ATGCAT	1 cut(s)	1198
MroI	TCCGGA	1 cut(s)	316
MroXI	GAANNNNTTC	1 cut(s)	423
MscI	TGGCCA	2 cut(s)	20, 1185
MseI	TTAA	1 cut(s)	1374
MslI	CAYNNNNRTG	3 cut(s)	1191, 1197, 1305
Msp20I	TGGCCA	2 cut(s)	20, 1185
MspI	CCGG	2 cut(s)	317, 1391
MspR9I	CCNGG	2 cut(s)	1314, 1391
Mva1269I	GAATGC	1 cut(s)	890
MvaI	CCWGG	1 cut(s)	1314
MwoI	GCNNNNNNNGC	3 cut(s)	115, 150, 412
NciI	CCSGG	1 cut(s)	1391
NcoI	CCATGG	2 cut(s)	1055, 1082
NdeI	CATATG	1 cut(s)	1198
NlaIV	GGNNCC	8 cut(s)	109, 315, 568, 605, 830, 973, 1001, 1076
NmuCI	GTSAC	2 cut(s)	121, 1048
NsiI	ATGCAT	1 cut(s)	1198
NspI	RCATGY	1 cut(s)	787
NspV	TTCGAA	1 cut(s)	190
PagI	TCATGA	1 cut(s)	739
PceI	AGGCCT	1 cut(s)	423
PctI	GAATGC	1 cut(s)	890
PdmI	GAANNNNTTC	1 cut(s)	423
PfeI	GAWTC	1 cut(s)	195
PflMI	CCANNNNNTGG	1 cut(s)	563
PkrI	GCNGC	5 cut(s)	789, 871, 1069, 1396, 1550
PleI	GAGTC	3 cut(s)	167, 245, 1045
PpsI	GAGTC	3 cut(s)	167, 245, 1045
PpuMI	RGGWCCY	1 cut(s)	604
PshAI	GACNNNNGTC	1 cut(s)	609
Psp5II	RGGWCCY	1 cut(s)	604
Psp6I	CCWGG	1 cut(s)	1312
PspFI	CCCAGC	1 cut(s)	1342
PspGI	CCWGG	1 cut(s)	1312
PspN4I	GGNNCC	8 cut(s)	109, 315, 568, 605, 830, 973, 1001, 1076
PspOMI	GGGCCC	2 cut(s)	107, 566
PspPI	GGNCC	9 cut(s)	107, 108, 566, 567, 604, 829, 1000, 1244, 1388
PspPPI	RGGWCCY	1 cut(s)	604
PstNI	CAGNNNCTG	2 cut(s)	176, 563
PsuI	RGATCY	4 cut(s)	313, 508, 1024, 1234
RsaI	GTAC	2 cut(s)	782, 1088
RsaNI	GTAC	2 cut(s)	781, 1087
RseI	CAYNNNNRTG	3 cut(s)	1191, 1197, 1305
SaqAI	TTAA	1 cut(s)	1374
SatI	GCNGC	5 cut(s)	788, 870, 1068, 1395, 1549
Sau96I	GGNCC	9 cut(s)	107, 108, 566, 567, 604, 829, 1000, 1244, 1388
SchI	GAGTC	3 cut(s)	167, 245, 1045
ScrFI	CCNGG	2 cut(s)	1314, 1391
SduI	GDGCHC	2 cut(s)	111, 570
SfaNI	GCATC	3 cut(s)	465, 685, 1329
SfuI	TTCGAA	1 cut(s)	190
SinI	GGWCC	4 cut(s)	604, 829, 1000, 1244
SmiMI	CAYNNNNRTG	3 cut(s)	1191, 1197, 1305
SpeI	ACTAGT	1 cut(s)	1595
Sse9I	AATT	8 cut(s)	87, 281, 288, 444, 1375, 1403, 1476, 1532
SseBI	AGGCCT	1 cut(s)	423
SsiI	CCGC	2 cut(s)	725, 1272
SspI	AATATT	1 cut(s)	1361
SspMI	CTAG	6 cut(s)	582, 608, 794, 1022, 1469, 1596
StuI	AGGCCT	1 cut(s)	423
StyD4I	CCNGG	2 cut(s)	1312, 1389
StyI	CCWWGG	4 cut(s)	607, 897, 1055, 1082
TaaI	ACNGT	7 cut(s)	57, 127, 325, 637, 878, 1261, 1280
TaqI	TCGA	6 cut(s)	148, 184, 190, 210, 377, 1213
TasI	AATT	8 cut(s)	87, 281, 288, 444, 1375, 1403, 1476, 1532
TfiI	GAWTC	1 cut(s)	195
Tru1I	TTAA	1 cut(s)	1374
Tru9I	TTAA	1 cut(s)	1374
TscAI	CASTG	1 cut(s)	328
TseFI	GTSAC	2 cut(s)	121, 1048
TseI	GCWGC	5 cut(s)	787, 869, 1067, 1394, 1548
Tsp45I	GTSAC	2 cut(s)	121, 1048
TspDTI	ATGAA	5 cut(s)	68, 369, 728, 1181, 1323
TspRI	CASTG	1 cut(s)	328
Van91I	CCANNNNNTGG	1 cut(s)	563
VpaK11BI	GGWCC	4 cut(s)	604, 829, 1000, 1244
XapI	RAATTY	3 cut(s)	87, 281, 1403
XbaI	TCTAGA	1 cut(s)	1468
XceI	RCATGY	1 cut(s)	787
XmaJI	CCTAGG	1 cut(s)	607
XmiI	GTMKAC	1 cut(s)	1218
XmnI	GAANNNNTTC	1 cut(s)	423
XspI	CTAG	6 cut(s)	582, 608, 794, 1022, 1469, 1596
Zsp2I	ATGCAT	1 cut(s)	1198

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.