Rmu_sc0042686.1_g000001

Iron/zinc purple acid phosphatase-like protein C

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0042686.1
OG0001482
Physical Location & Seq
Forward (+)
693 .. 3238
2546 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0042686.1_g000001.1.cds

Sequence Viewer

Length: 1581 bp
atggcacacccttcatggccctcccttcccgccctcgctgccctaaccacctctctgctcgttctggcggtgggcctttccttttcccatccccccaaggcccgggttccgaccaccctcgacggccccttccgccctgtcaccgtccccttcgacctcagcctgcgcggcaacgccgtcgacttgccggacaacgatcttagagttgtccgccgcgctaagggcttcgagcccgagcagatttccctcactctctccgccacctacgattccgtttggatctcctggattacagggaaatcgcaaattggatacaacataaagccgttggatcccaaaagtgtgaagggtgttgttcgttatggaaagtttaggaatccaccaacgcatgaagcaactggatattctcttgtttacagtcagctttacccttatgtgggtcttcagaactacacttctggaatcatccaccatgttcgccttacagggttgaaacccaatacaaagtacttttatagatgtggagatccttctatacctgccatgagtgacattcaccaattcaagaccatgccagttcctggtgcgaagagctacccgaagagaatagcaattgtgggagatcttggccttacttacaatacaaccaccacagttggtcacttgactagtaatgatcctgaccttatgctcttgattggtgatgttacttatgcgaatttatacctcacaaatggaactggctctgactgctattcctgtacgtttgcggacactccgatacatgagacctatcagcctcgatgggattactggggaaggtttatgcagaatttgatttctagagttccgataatggtggtagaagggaaccatgaagaagaagaacaggttgagaacaagacatttgtggcttatagttctcggtttgcattcccatctgcagaaagtggatcttcgtccccaatgtactactcgtttaatgcaggggggattcatttcattatgcttggagcctatactctctttgacaaatcatcggagcaatacaggtggctggagcaagatttggccaaggtggacagatccatgactccatggctagtagctacttggcatccaccgtggtacagtacctatgtagcccattacagagaggcagaatgtgtgagactggaaatggaagagttactttactcttatggcgttgatatagtgttcagtggacatgtccatgcctacgagaggtcaaatcgagtttataattacacattagatccatgtggtcctgtgcatatcactattggtgatggaggtaatcgagagaagatggcaatccaacatgctgatgaacctggtctgtgcccaacgccaagtgctgatgaatacctcggcatgtgtgcaagaaattttacatccggtccagcagctggtaaattttgttgggatcggcaaccagattacagtgccttcagagaaagcagctttggccatgggatccttgaggtacaccattttgtctatgtttctattcattcggagagtccaagttcaagaatacttcacctcactaggaaatag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Metallophos Metallophos_C Pur_ac_phosph_N

Protein Analysis

526

Amino Acids

59.08

Weight (kDa)

6.4

Isoelectric Point (pI)

41.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1263
Acc36I ACCTGC 1 cut(s) 547
AccB7I CCANNNNNTGG 2 cut(s) 581, 1430
AccI GTMKAC 1 cut(s) 180
AccII CGCG 2 cut(s) 168, 216
AciI CCGC 8 cut(s) 30, 68, 133, 168, 211, 214, 258, 770
AcoI YGGCCR 2 cut(s) 1071, 1489
AcsI RAATTY 4 cut(s) 718, 832, 1408, 1436
AcuI CTGAAG 2 cut(s) 428, 1456
AfaI GTAC 6 cut(s) 509, 763, 971, 1130, 1135, 1509
AfiI CCNNNNNNNGG 7 cut(s) 102, 220, 436, 437, 581, 1245, 1430
AflIII ACRYGT 1 cut(s) 1228
AgsI TTSAA 3 cut(s) 493, 565, 1554
AhlI ACTAGT 1 cut(s) 668
AjnI CCWGG 3 cut(s) 284, 580, 1354
AjuI GAANNNNNNNTTGG 2 cut(s) 1470, 1502
AluBI AGCT 5 cut(s) 424, 594, 1109, 1430, 1485
AluI AGCT 5 cut(s) 424, 594, 1109, 1430, 1485
Alw26I GTCTC 2 cut(s) 782, 1165
AlwNI CAGNNNCTG 2 cut(s) 581, 1430
Ama87I CYCGRG 2 cut(s) 102, 233
AoxI GGCC 7 cut(s) 17, 73, 99, 124, 628, 1071, 1489
ApeKI GCWGC 3 cut(s) 38, 1427, 1482
ApoI RAATTY 4 cut(s) 718, 832, 1408, 1436
AspLEI GCGC 2 cut(s) 168, 218
AspS9I GGNCC 6 cut(s) 18, 73, 100, 125, 1286, 1421
AsuC2I CCSGG 2 cut(s) 103, 104
AsuHPI GGTGA 5 cut(s) 133, 548, 713, 1319, 1556
AvaI CYCGRG 2 cut(s) 102, 233
AvaII GGWCC 2 cut(s) 1286, 1421
BaeGI GKGCMC 1 cut(s) 1367
BalI TGGCCA 2 cut(s) 1073, 1491
BamHI GGATCC 2 cut(s) 331, 1497
BanII GRGCYC 1 cut(s) 234
BbsI GAAGAC 1 cut(s) 434
BbvCI CCTCAGC 1 cut(s) 158
BbvI GCAGC 3 cut(s) 25, 1439, 1494
BccI CCATC 5 cut(s) 96, 798, 946, 1304, 1324
BceAI ACGGC 3 cut(s) 139, 161, 310
BcgI CGANNNNNNTGC 2 cut(s) 160, 194
BciT130I CCWGG 3 cut(s) 286, 582, 1356
BciVI GTATCC 1 cut(s) 305
BcnI CCSGG 2 cut(s) 103, 104
BcoDI GTCTC 2 cut(s) 782, 1165
BcuI ACTAGT 1 cut(s) 668
BfaI CTAG 4 cut(s) 669, 843, 1103, 1572
BfmI CTRYAG 1 cut(s) 942
BfuAI ACCTGC 1 cut(s) 547
BfuI GTATCC 1 cut(s) 305
BglI GCCNNNNNGGC 1 cut(s) 168
BglII AGATCT 1 cut(s) 622
BisI GCNGC 5 cut(s) 39, 169, 214, 1428, 1483
BlsI GCNGC 5 cut(s) 40, 170, 215, 1429, 1484
BmcAI AGTACT 1 cut(s) 509
Bme1390I CCNGG 5 cut(s) 103, 104, 286, 582, 1356
Bme18I GGWCC 2 cut(s) 1286, 1421
BmeT110I CYCGRG 2 cut(s) 102, 233
BmgT120I GGNCC 6 cut(s) 18, 73, 100, 125, 1286, 1421
BmiI GGNNCC 6 cut(s) 108, 127, 333, 872, 1015, 1499
BmrFI CCNGG 5 cut(s) 103, 104, 286, 582, 1356
BmrI ACTGGG 1 cut(s) 823
BmsI GCATC 1 cut(s) 1126
BmuI ACTGGG 1 cut(s) 823
BpiI GAAGAC 1 cut(s) 434
BpmI CTGGAG 1 cut(s) 1079
Bpu10I CCTNAGC 2 cut(s) 158, 219
BpuEI CTTGAG 1 cut(s) 1523
BpuMI CCSGG 2 cut(s) 103, 104
BsaBI GATNNNNATC 1 cut(s) 1334
BsaI GGTCTC 1 cut(s) 782
BsaJI CCNNGG 7 cut(s) 96, 102, 1074, 1097, 1124, 1390, 1492
BsaWI WCCGGW 1 cut(s) 1418
Bsc4I CCNNNNNNNGG 7 cut(s) 102, 220, 436, 437, 581, 1245, 1430
Bse1I ACTGG 5 cut(s) 403, 575, 745, 818, 1179
Bse8I GATNNNNATC 1 cut(s) 1334
BseBI CCWGG 3 cut(s) 286, 582, 1356
BseDI CCNNGG 7 cut(s) 96, 102, 1074, 1097, 1124, 1390, 1492
BseGI GGATG 4 cut(s) 88, 465, 1117, 1415
BseJI GATNNNNATC 1 cut(s) 1334
BseLI CCNNNNNNNGG 7 cut(s) 102, 220, 436, 437, 581, 1245, 1430
BseMII CTCAG 1 cut(s) 172
BseNI ACTGG 5 cut(s) 403, 575, 745, 818, 1179
BseSI GKGCMC 1 cut(s) 1367
BseXI GCAGC 3 cut(s) 25, 1439, 1494
Bsh1236I CGCG 2 cut(s) 168, 216
BshFI GGCC 7 cut(s) 19, 75, 101, 126, 630, 1073, 1491
BsiHKCI CYCGRG 2 cut(s) 102, 233
BsiSI CCGG 3 cut(s) 103, 188, 1419
BslFI GGGAC 2 cut(s) 131, 946
BslI CCNNNNNNNGG 7 cut(s) 102, 220, 436, 437, 581, 1245, 1430
BsmAI GTCTC 2 cut(s) 782, 1165
BsmFI GGGAC 2 cut(s) 131, 946
BsmI GAATGC 1 cut(s) 932
BsnI GGCC 7 cut(s) 19, 75, 101, 126, 630, 1073, 1491
Bso31I GGTCTC 1 cut(s) 782
BsoBI CYCGRG 2 cut(s) 102, 233
Bsp1286I GDGCHC 2 cut(s) 234, 1367
Bsp19I CCATGG 2 cut(s) 1097, 1492
BspACI CCGC 8 cut(s) 30, 68, 133, 168, 211, 214, 258, 770
BspANI GGCC 7 cut(s) 19, 75, 101, 126, 630, 1073, 1491
BspCNI CTCAG 1 cut(s) 171
BspFNI CGCG 2 cut(s) 168, 216
BspLI GGNNCC 6 cut(s) 108, 127, 333, 872, 1015, 1499
BspMAI CTGCAG 1 cut(s) 946
BspMI ACCTGC 1 cut(s) 547
BspQI GCTCTTC 1 cut(s) 584
BspTNI GGTCTC 1 cut(s) 782
BsrI ACTGG 5 cut(s) 403, 575, 745, 818, 1179
BssECI CCNNGG 7 cut(s) 96, 102, 1074, 1097, 1124, 1390, 1492
BssT1I CCWWGG 4 cut(s) 96, 1074, 1097, 1492
Bst2UI CCWGG 3 cut(s) 286, 582, 1356
Bst4CI ACNGT 6 cut(s) 145, 419, 655, 1125, 1133, 1466
Bst6I CTCTTC 3 cut(s) 584, 596, 1179
BstC8I GCNNGC 1 cut(s) 164
BstDEI CTNAG 3 cut(s) 158, 200, 219
BstDSI CCRYGG 3 cut(s) 1097, 1124, 1492
BstENI CCTNNNNNAGG 1 cut(s) 1243
BstF5I GGATG 4 cut(s) 88, 465, 1117, 1415
BstFNI CGCG 2 cut(s) 168, 216
BstHHI GCGC 2 cut(s) 168, 218
BstMAI GTCTC 2 cut(s) 782, 1165
BstMWI GCNNNNNNNGC 6 cut(s) 38, 132, 168, 222, 750, 1488
BstNI CCWGG 3 cut(s) 286, 582, 1356
BstNSI RCATGY 3 cut(s) 1232, 1346, 1399
BstSCI CCNGG 5 cut(s) 101, 102, 284, 580, 1354
BstSFI CTRYAG 1 cut(s) 942
BstSLI GKGCMC 1 cut(s) 1367
BstUI CGCG 2 cut(s) 168, 216
BstV1I GCAGC 3 cut(s) 25, 1439, 1494
BstV2I GAAGAC 1 cut(s) 434
BstX2I RGATCY 8 cut(s) 279, 331, 526, 622, 953, 1085, 1276, 1497
BstYI RGATCY 8 cut(s) 279, 331, 526, 622, 953, 1085, 1276, 1497
BsuI GTATCC 1 cut(s) 305
BsuRI GGCC 7 cut(s) 19, 75, 101, 126, 630, 1073, 1491
BtgI CCRYGG 3 cut(s) 1097, 1124, 1492
BtsCI GGATG 4 cut(s) 88, 465, 1117, 1415
BtsIMutI CAGTG 2 cut(s) 1228, 1471
BveI ACCTGC 1 cut(s) 547
Cac8I GCNNGC 1 cut(s) 164
CaiI CAGNNNCTG 2 cut(s) 581, 1430
CfoI GCGC 2 cut(s) 168, 218
Cfr13I GGNCC 6 cut(s) 18, 73, 100, 125, 1286, 1421
Cfr9I CCCGGG 1 cut(s) 102
CsiI ACCWGGT 1 cut(s) 1354
Csp6I GTAC 6 cut(s) 508, 762, 970, 1129, 1134, 1508
CspCI CAANNNNNGTGG 4 cut(s) 637, 672, 1034, 1069
CviQI GTAC 6 cut(s) 508, 762, 970, 1129, 1134, 1508
DdeI CTNAG 3 cut(s) 158, 200, 219
EaeI YGGCCR 2 cut(s) 1071, 1489
Eam1104I CTCTTC 3 cut(s) 584, 596, 1179
EarI CTCTTC 3 cut(s) 584, 596, 1179
EciI GGCGGA 3 cut(s) 122, 200, 247
Eco130I CCWWGG 4 cut(s) 96, 1074, 1097, 1492
Eco24I GRGCYC 1 cut(s) 234
Eco31I GGTCTC 1 cut(s) 782
Eco47I GGWCC 2 cut(s) 1286, 1421
Eco57I CTGAAG 2 cut(s) 428, 1456
Eco88I CYCGRG 2 cut(s) 102, 233
EcoNI CCTNNNNNAGG 1 cut(s) 1243
EcoRII CCWGG 3 cut(s) 284, 580, 1354
EcoT14I CCWWGG 4 cut(s) 96, 1074, 1097, 1492
EcoT38I GRGCYC 1 cut(s) 234
ErhI CCWWGG 4 cut(s) 96, 1074, 1097, 1492
FalI AAGNNNNNCTT 4 cut(s) 940, 972, 1176, 1208
FaqI GGGAC 2 cut(s) 131, 946
FauI CCCGC 1 cut(s) 37
FblI GTMKAC 1 cut(s) 180
Fnu4HI GCNGC 5 cut(s) 39, 169, 214, 1428, 1483
FokI GGATG 4 cut(s) 75, 452, 1104, 1402
FriOI GRGCYC 1 cut(s) 234
Fsp4HI GCNGC 5 cut(s) 39, 169, 214, 1428, 1483
FspBI CTAG 4 cut(s) 669, 843, 1103, 1572
GlaI GCGC 2 cut(s) 167, 217
GluI GCNGC 5 cut(s) 39, 169, 214, 1428, 1483
GsuI CTGGAG 1 cut(s) 1079
HaeIII GGCC 7 cut(s) 19, 75, 101, 126, 630, 1073, 1491
HapII CCGG 3 cut(s) 103, 188, 1419
HhaI GCGC 2 cut(s) 168, 218
Hin6I GCGC 2 cut(s) 166, 216
HinP1I GCGC 2 cut(s) 166, 216
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HinfI GANTC 6 cut(s) 269, 376, 462, 994, 1093, 1543
HpaII CCGG 3 cut(s) 103, 188, 1419
HphI GGTGA 5 cut(s) 133, 548, 713, 1319, 1556
Hpy166II GTNNAC 5 cut(s) 181, 415, 1081, 1226, 1510
Hpy188I TCNGA 8 cut(s) 111, 447, 748, 780, 852, 1042, 1475, 1540
Hpy188III TCNNGA 7 cut(s) 459, 565, 680, 694, 843, 1322, 1554
Hpy8I GTNNAC 5 cut(s) 181, 415, 1081, 1226, 1510
Hpy99I CGWCG 2 cut(s) 125, 182
HpyAV CCTTC 9 cut(s) 21, 35, 139, 160, 340, 540, 813, 860, 1480
HpyCH4III ACNGT 6 cut(s) 145, 419, 655, 1125, 1133, 1466
HpyCH4IV ACGT 1 cut(s) 764
HpyCH4V TGCA 6 cut(s) 829, 932, 944, 986, 1294, 1403
HpyF10VI GCNNNNNNNGC 6 cut(s) 38, 132, 168, 222, 750, 1488
HpyF3I CTNAG 3 cut(s) 158, 200, 219
HpySE526I ACGT 1 cut(s) 764
HspAI GCGC 2 cut(s) 166, 216
LguI GCTCTTC 1 cut(s) 584
LmnI GCTCC 3 cut(s) 1013, 1042, 1060
Lsp1109I GCAGC 3 cut(s) 25, 1439, 1494
LweI GCATC 1 cut(s) 1126
MabI ACCWGGT 1 cut(s) 1354
MaeI CTAG 4 cut(s) 669, 843, 1103, 1572
MaeII ACGT 1 cut(s) 764
MaeIII GTNAC 5 cut(s) 139, 548, 659, 706, 1188
MboII GAAGA 9 cut(s) 434, 601, 613, 890, 893, 896, 948, 1196, 1339
MfeI CAATTG 1 cut(s) 612
MflI RGATCY 8 cut(s) 279, 331, 526, 622, 953, 1085, 1276, 1497
MhlI GDGCHC 2 cut(s) 234, 1367
MlsI TGGCCA 2 cut(s) 1073, 1491
MluCI AATT 8 cut(s) 306, 560, 612, 718, 832, 1264, 1408, 1436
MluNI TGGCCA 2 cut(s) 1073, 1491
MlyI GAGTC 2 cut(s) 1087, 1552
MmeI TCCRAC 3 cut(s) 134, 309, 1363
Mox20I TGGCCA 2 cut(s) 1073, 1491
MscI TGGCCA 2 cut(s) 1073, 1491
MseI TTAA 1 cut(s) 981
MslI CAYNNNNRTG 2 cut(s) 1233, 1347
Msp20I TGGCCA 2 cut(s) 1073, 1491
MspA1I CMGCKG 1 cut(s) 1430
MspI CCGG 3 cut(s) 103, 188, 1419
MspR9I CCNGG 5 cut(s) 103, 104, 286, 582, 1356
MunI CAATTG 1 cut(s) 612
Mva1269I GAATGC 1 cut(s) 932
MvaI CCWGG 3 cut(s) 286, 582, 1356
MvnI CGCG 2 cut(s) 168, 216
MwoI GCNNNNNNNGC 6 cut(s) 38, 132, 168, 222, 750, 1488
NciI CCSGG 2 cut(s) 103, 104
NcoI CCATGG 2 cut(s) 1097, 1492
NlaIV GGNNCC 6 cut(s) 108, 127, 333, 872, 1015, 1499
NmeAIII GCCGAG 1 cut(s) 1371
NmuCI GTSAC 3 cut(s) 139, 548, 659
NspI RCATGY 3 cut(s) 1232, 1346, 1399
PciI ACATGT 1 cut(s) 1228
PciSI GCTCTTC 1 cut(s) 584
PctI GAATGC 1 cut(s) 932
PfeI GAWTC 4 cut(s) 269, 376, 462, 994
PflMI CCANNNNNTGG 2 cut(s) 581, 1430
PfoI TCCNGGA 1 cut(s) 284
PkrI GCNGC 5 cut(s) 40, 170, 215, 1429, 1484
PleI GAGTC 2 cut(s) 1087, 1551
PpsI GAGTC 2 cut(s) 1087, 1551
PscI ACATGT 1 cut(s) 1228
PsiI TTATAA 1 cut(s) 1263
Psp6I CCWGG 3 cut(s) 284, 580, 1354
PspGI CCWGG 3 cut(s) 284, 580, 1354
PspN4I GGNNCC 6 cut(s) 108, 127, 333, 872, 1015, 1499
PspPI GGNCC 6 cut(s) 18, 73, 100, 125, 1286, 1421
PstI CTGCAG 1 cut(s) 946
PstNI CAGNNNCTG 2 cut(s) 581, 1430
PsuI RGATCY 8 cut(s) 279, 331, 526, 622, 953, 1085, 1276, 1497
PvuII CAGCTG 1 cut(s) 1430
RsaI GTAC 6 cut(s) 509, 763, 971, 1130, 1135, 1509
RsaNI GTAC 6 cut(s) 508, 762, 970, 1129, 1134, 1508
RseI CAYNNNNRTG 2 cut(s) 1233, 1347
SalI GTCGAC 1 cut(s) 179
SapI GCTCTTC 1 cut(s) 584
SaqAI TTAA 1 cut(s) 981
SatI GCNGC 5 cut(s) 39, 169, 214, 1428, 1483
Sau96I GGNCC 6 cut(s) 18, 73, 100, 125, 1286, 1421
ScaI AGTACT 1 cut(s) 509
SchI GAGTC 2 cut(s) 1087, 1552
ScrFI CCNGG 5 cut(s) 103, 104, 286, 582, 1356
SduI GDGCHC 2 cut(s) 234, 1367
SexAI ACCWGGT 1 cut(s) 1354
SfaNI GCATC 1 cut(s) 1126
SfcI CTRYAG 1 cut(s) 942
SinI GGWCC 2 cut(s) 1286, 1421
SmaI CCCGGG 1 cut(s) 104
SmiMI CAYNNNNRTG 2 cut(s) 1233, 1347
SmlI CTYRAG 1 cut(s) 1502
SmoI CTYRAG 1 cut(s) 1502
SpeI ACTAGT 1 cut(s) 668
Sse9I AATT 8 cut(s) 306, 560, 612, 718, 832, 1264, 1408, 1436
SsiI CCGC 8 cut(s) 30, 68, 133, 168, 211, 214, 258, 770
SspMI CTAG 4 cut(s) 669, 843, 1103, 1572
StyD4I CCNGG 5 cut(s) 101, 102, 284, 580, 1354
StyI CCWWGG 4 cut(s) 96, 1074, 1097, 1492
TaaI ACNGT 6 cut(s) 145, 419, 655, 1125, 1133, 1466
TaiI ACGT 1 cut(s) 767
TaqI TCGA 7 cut(s) 120, 153, 180, 228, 802, 1255, 1321
TasI AATT 8 cut(s) 306, 560, 612, 718, 832, 1264, 1408, 1436
TatI WGTACW 2 cut(s) 507, 969
TauI GCSGC 2 cut(s) 171, 216
TfiI GAWTC 4 cut(s) 269, 376, 462, 994
Tru1I TTAA 1 cut(s) 981
Tru9I TTAA 1 cut(s) 981
TscAI CASTG 2 cut(s) 1228, 1471
TseFI GTSAC 3 cut(s) 139, 548, 659
TseI GCWGC 3 cut(s) 38, 1427, 1482
Tsp45I GTSAC 3 cut(s) 139, 548, 659
TspDTI ATGAA 7 cut(s) 405, 891, 986, 991, 1365, 1398, 1523
TspGWI ACGGA 1 cut(s) 262
TspMI CCCGGG 1 cut(s) 102
TspRI CASTG 2 cut(s) 1228, 1471
Van91I CCANNNNNTGG 2 cut(s) 581, 1430
VpaK11BI GGWCC 2 cut(s) 1286, 1421
XagI CCTNNNNNAGG 1 cut(s) 1243
XapI RAATTY 4 cut(s) 718, 832, 1408, 1436
XbaI TCTAGA 1 cut(s) 842
XceI RCATGY 3 cut(s) 1232, 1346, 1399
XmaI CCCGGG 1 cut(s) 102
XmiI GTMKAC 1 cut(s) 180
XspI CTAG 4 cut(s) 669, 843, 1103, 1572
ZrmI AGTACT 1 cut(s) 509
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.