Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0013105

Physical Location & Seq

Genomic Coordinates Reverse (-)

21484641 .. 21486810

Gene Structure 2170 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g18590.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1908 bp

ATGAGAAAATCTTCAATCTCACTCTTCTCCCACCTCACTCGCCAGAGACTCAAATCCTCAGCCCCTCCTCTTCTTTCCAGAAATTACATTTCCGACCGCCCATCCTCCTCCTCCTCCTCCTCCCCCTCTCCGCCGCCGGTCTCACCGGCCCGTTTCAGCCCCTGCGCCATAATTCAGGACTCATTCTTCACAAGTAGCCAATTCCAAGCAAACCCATCTCGAAATATGAACACCGTCGTCGAAACATCGCCTCAAATTTCCTCCAGGCAGAGAAAATCCATGGAAAAGTCGGACCTTGAAGAGGCTTTCGAGTCTGCGAAAACCATCGAAGAAATGCTTGCGGCTTTCAAGGCCATGGAGTCGGCTTTCGAAGAGAGGGAGCTCGGCATGGCTGCTCTGAAAGTCGGCCTCAAGCTTGACCAGGAAGGCGAGGACCCTGAAAAGGCTCTGTCTTTTGCTACCAGAGCATTGAAGGCCTTGGATAGAGACGATAGCGGTAAGCCCTCTTTGGTTGTTGCCATGGCTTTGCAGTTAATGGGTTCTGTTAATTATGGATTAAAAAGGTTTAGTGATAGTTTGGGGTACCTTAATAGGGCTAATAGAGCGTTGTGTAGATTAGAGGAGGAGGGTTTTGATGATCGGGATCTTAGGCCGGTGCTTCACGCTGTGCAGCTCGAGTTGGCAAATGTGAAGACGGCAATGGGGAGGAGAGAGGAGGCTCTAGGGAATCTTAGGAAGTGTTTGGAGATTAAGGAGTTGATGTTGGAGAAAGATAGTACTGAACTTGGCAAGGGACACCGGGATTTGGCAGAGGCGTATGTAGCTCTTTTGAACTTTAAGGATGCATTAGGATTCTGTAGGAAGGCGTTGGAGATTCACAAAGAAAAGTTGGGGCAGAATTCGGTTGAGGTTGCACATGACAGGAGGCTTCTTGCAGTCATTTATACTGGGTTGGAGGAGCATGAGAAGGCGTTGGAGCAAAATGCATTGTCACAAAGGGTTTTGAAGAATTGGGGTCTTAGTTCCGACTTGCTTCGTGCAGAGATTGATGCTGCTAATATGCAGATTGCCCTGGGAAACTTTGACGAGGCTATTGAAACTTTGAAGCGTGTTGTTCAGCAGACAGATAAGGATAGTGAGACTAGGGCACTGGTGTTTATCTCGATGGGAAAAGCATTATGTAATCAGGAAAGAACGGCAGATGCAAAGAGATGTTTGGAGCTTGCTTGTGGAATTCTTGACAAGAGAGAGACAATCTCCCCAGTAGATGTTTCTGAAGCATACTCGGAGATAGCAATGCAATATGAGACTATGAATGAGTTTGAAACTGCAATTTCACTGTTAAAGCGAACACTAGCTTTGCTTGAGAAGCTCCCACAAGAACAGCACTCTGAGGGAAGTGTTTCAGCTAGAATAGGGTGGTTACTTCTGTTGACCGGAAAGGTCTCACAGGCTGTTCCTTACTTGGAGAGTGCAGCTGAGAGGTTGAAAGAGAGCTTTGGTCCCAAGCATTTTGGCGTCGGCTATATTTACAATAACTTGGGTGCAGCATATTTAGAACTAGAGAGACCTCAGTCAGCTGCACAGATGTTTGCTGTTGCGAAGGACATCATGGATGTCTCACTTGGTCCCCATCATGCCGATTCAATTGAGTCATGCCAGAACCTCTCAAAAGCATACGCTGCCATGGGAAGCTATGTCCTTGCAATCCAATTCCAGCAGCAAGTAGTTGATGCTTGGGAAAGCCACGGACCAAGTGCTGAAGACGAACTCAAAGAAGCACACCGAGTTCTCGAACAATTGAAATTTAAAGCCCGTAACACATTTGCAAGTAATGAATTTACTACAAAGGCCTTACCTCTGCCCCAGACCCAAACGCATGGATCTGACAGGAGTTCAAAAGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005929 GO:0006996 GO:0008150 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0042995 GO:0043226 GO:0044085 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060271 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0090090 GO:0090175 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

636

Amino Acids

70.47

Weight (kDa)

5.86

Isoelectric Point (pI)

44.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_NPHP3	PF24885	232 - 325	1.9e-10	Nephrocystin-3 TPR domain
TPR_12	PF13424	268 - 327	1e-06	Tetratricopeptide repeat
TPR_12	PF13424	424 - 497	1.8e-06	Tetratricopeptide repeat
TPR_12	PF13424	476 - 537	9.4e-09	Tetratricopeptide repeat
TPR_12	PF13424	510 - 581	2.5e-08	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0013105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31240
fragaria_vesca	FvH4_2g21700 FvH4_2g21700 FvH4_2g21700
malus_domestica	MD05G1199500.v1.1
prunus_persica	Prupe.8G225300_v2.0.a1
pyrus_communis	pycom05g18590 pycom10g16070
rosa_chinensis	RchiOBHm_Chr6g0288381
rosa_laevigata	RLG00000012409
rosa_multiflora	Rmu_sc0001038.1_g000010
rosa_roxburghii	Rroxscaffold_7G00180110
rosa_rugosa	Rorug06G0196100
rosa_samantha	Rh6AG307000 Rh6BG313000 Rh6CG320800 Rh6DG306200
rosa_wichuraiana	Rw6G026560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc65I	GGTACC	1 cut(s)	582
AccB1I	GGYRCC	1 cut(s)	582
AciI	CCGC	5 cut(s)	97, 131, 134, 341, 495
AclWI	GGATC	2 cut(s)	651, 1891
AcsI	RAATTY	5 cut(s)	255, 898, 1233, 1805, 1838
AcuI	CTGAAG	2 cut(s)	1296, 1782
AcyI	GRCGYC	1 cut(s)	1518
AdeI	CACNNNGTG	1 cut(s)	667
AfaI	GTAC	2 cut(s)	584, 778
AfiI	CCNNNNNNNGG	4 cut(s)	301, 442, 592, 805
AjnI	CCWGG	3 cut(s)	263, 420, 1071
Alw21I	GWGCWC	1 cut(s)	384
Alw26I	GTCTC	9 cut(s)	40, 145, 480, 1133, 1244, 1301, 1450, 1561, 1624
AlwI	GGATC	2 cut(s)	651, 1891
AlwNI	CAGNNNCTG	1 cut(s)	162
Ama87I	CYCGRG	1 cut(s)	674
AoxI	GGCC	6 cut(s)	147, 351, 406, 474, 650, 1851
ApeKI	GCWGC	8 cut(s)	392, 670, 1052, 1475, 1547, 1580, 1682, 1720
ApoI	RAATTY	5 cut(s)	255, 898, 1233, 1805, 1838
Asp700I	GAANNNNTTC	2 cut(s)	10, 1402
Asp718I	GGTACC	1 cut(s)	582
AspLEI	GCGC	1 cut(s)	167
AspS9I	GGNCC	6 cut(s)	148, 292, 433, 1502, 1628, 1751
AsuC2I	CCSGG	1 cut(s)	800
AsuHPI	GGTGA	1 cut(s)	135
AsuII	TTCGAA	1 cut(s)	369
AvaI	CYCGRG	1 cut(s)	674
AvaII	GGWCC	5 cut(s)	292, 433, 1502, 1628, 1751
BaeGI	GKGCMC	1 cut(s)	1150
BanI	GGYRCC	1 cut(s)	582
BanII	GRGCYC	1 cut(s)	384
BbsI	GAAGAC	2 cut(s)	698, 1770
Bbv12I	GWGCWC	1 cut(s)	384
BbvCI	CCTCAGC	1 cut(s)	58
BbvI	GCAGC	8 cut(s)	379, 682, 1039, 1487, 1559, 1567, 1669, 1732
BccI	CCATC	5 cut(s)	109, 223, 332, 1159, 1641
BceAI	ACGGC	2 cut(s)	711, 1212
BciT130I	CCWGG	3 cut(s)	265, 422, 1073
BcnI	CCSGG	1 cut(s)	800
BcoDI	GTCTC	9 cut(s)	40, 145, 480, 1133, 1244, 1301, 1450, 1561, 1624
BfaI	CTAG	5 cut(s)	722, 1143, 1355, 1410, 1562
BfmI	CTRYAG	1 cut(s)	856
BmcAI	AGTACT	1 cut(s)	778
Bme1390I	CCNGG	4 cut(s)	265, 422, 800, 1073
Bme18I	GGWCC	5 cut(s)	292, 433, 1502, 1628, 1751
BmeT110I	CYCGRG	1 cut(s)	674
BmgT120I	GGNCC	6 cut(s)	148, 292, 433, 1502, 1628, 1751
BmiI	GGNNCC	4 cut(s)	435, 584, 1504, 1630
BmrFI	CCNGG	4 cut(s)	265, 422, 800, 1073
BmrI	ACTGGG	2 cut(s)	957, 1256
BmsI	GCATC	4 cut(s)	832, 1039, 1192, 1723
BmuI	ACTGGG	2 cut(s)	957, 1256
BoxI	GACNNNNGTC	1 cut(s)	1573
BpiI	GAAGAC	2 cut(s)	698, 1770
BplI	GAGNNNNNCTC	2 cut(s)	1241, 1273
BpmI	CTGGAG	1 cut(s)	247
Bpu10I	CCTNAGC	1 cut(s)	58
Bpu14I	TTCGAA	1 cut(s)	369
BpuEI	CTTGAG	2 cut(s)	395, 1385
BpuMI	CCSGG	1 cut(s)	800
BsaBI	GATNNNNATC	1 cut(s)	642
BsaHI	GRCGYC	1 cut(s)	1518
BsaI	GGTCTC	3 cut(s)	145, 1450, 1561
BsaJI	CCNNGG	8 cut(s)	279, 354, 477, 519, 1071, 1072, 1686, 1747
BsaWI	WCCGGW	1 cut(s)	1436
BsaXI	ACNNNNNCTCC	2 cut(s)	746, 776
Bsc4I	CCNNNNNNNGG	4 cut(s)	301, 442, 592, 805
Bse118I	RCCGGY	3 cut(s)	136, 145, 652
Bse1I	ACTGG	3 cut(s)	952, 1155, 1262
Bse3DI	GCAATG	2 cut(s)	705, 1302
Bse8I	GATNNNNATC	1 cut(s)	642
BseBI	CCWGG	3 cut(s)	265, 422, 1073
BseDI	CCNNGG	8 cut(s)	279, 354, 477, 519, 1071, 1072, 1686, 1747
BseGI	GGATG	3 cut(s)	101, 847, 1621
BseJI	GATNNNNATC	1 cut(s)	642
BseLI	CCNNNNNNNGG	4 cut(s)	301, 442, 592, 805
BseMI	GCAATG	2 cut(s)	705, 1302
BseMII	CTCAG	4 cut(s)	72, 1383, 1470, 1586
BseNI	ACTGG	3 cut(s)	952, 1155, 1262
BseSI	GKGCMC	1 cut(s)	1150
BseXI	GCAGC	8 cut(s)	379, 682, 1039, 1487, 1559, 1567, 1669, 1732
BsgI	GTGCAG	5 cut(s)	689, 1059, 1494, 1566, 1566
Bsh1285I	CGRYCG	1 cut(s)	97
BshFI	GGCC	6 cut(s)	149, 353, 408, 476, 652, 1853
BshNI	GGYRCC	1 cut(s)	582
BsiEI	CGRYCG	1 cut(s)	97
BsiHKAI	GWGCWC	1 cut(s)	384
BsiHKCI	CYCGRG	1 cut(s)	674
BsiSI	CCGG	5 cut(s)	137, 146, 653, 799, 1437
BslFI	GGGAC	3 cut(s)	807, 1488, 1614
BslI	CCNNNNNNNGG	4 cut(s)	301, 442, 592, 805
BsmAI	GTCTC	9 cut(s)	40, 145, 480, 1133, 1244, 1301, 1450, 1561, 1624
BsmBI	CGTCTC	1 cut(s)	480
BsmFI	GGGAC	3 cut(s)	807, 1488, 1614
BsnI	GGCC	6 cut(s)	149, 353, 408, 476, 652, 1853
Bso31I	GGTCTC	3 cut(s)	145, 1450, 1561
BsoBI	CYCGRG	1 cut(s)	674
Bsp119I	TTCGAA	1 cut(s)	369
Bsp1286I	GDGCHC	2 cut(s)	384, 1150
Bsp143I	GATC	3 cut(s)	637, 643, 1883
Bsp19I	CCATGG	4 cut(s)	279, 354, 519, 1686
BspACI	CCGC	5 cut(s)	97, 131, 134, 341, 495
BspANI	GGCC	6 cut(s)	149, 353, 408, 476, 652, 1853
BspCNI	CTCAG	4 cut(s)	71, 1384, 1471, 1585
BspLI	GGNNCC	4 cut(s)	435, 584, 1504, 1630
BspPI	GGATC	2 cut(s)	651, 1891
BspT104I	TTCGAA	1 cut(s)	369
BspT107I	GGYRCC	1 cut(s)	582
BspTNI	GGTCTC	3 cut(s)	145, 1450, 1561
BsrDI	GCAATG	2 cut(s)	705, 1302
BsrFI	RCCGGY	3 cut(s)	136, 145, 652
BsrI	ACTGG	3 cut(s)	952, 1155, 1262
BssAI	RCCGGY	3 cut(s)	136, 145, 652
BssECI	CCNNGG	8 cut(s)	279, 354, 477, 519, 1071, 1072, 1686, 1747
BssMI	GATC	3 cut(s)	637, 643, 1883
BssNI	GRCGYC	1 cut(s)	1518
BssT1I	CCWWGG	5 cut(s)	279, 354, 477, 519, 1686
Bst2UI	CCWGG	3 cut(s)	265, 422, 1073
Bst4CI	ACNGT	2 cut(s)	235, 1341
Bst6I	CTCTTC	4 cut(s)	29, 75, 294, 366
BstACI	GRCGYC	1 cut(s)	1518
BstAPI	GCANNNNNTGC	1 cut(s)	1682
BstBI	TTCGAA	1 cut(s)	369
BstC8I	GCNNGC	2 cut(s)	339, 1224
BstDEI	CTNAG	7 cut(s)	58, 647, 731, 1019, 1392, 1479, 1572
BstDSI	CCRYGG	5 cut(s)	279, 354, 519, 1686, 1747
BstENI	CCTNNNNNAGG	1 cut(s)	299
BstF5I	GGATG	3 cut(s)	101, 847, 1621
BstHHI	GCGC	1 cut(s)	167
BstKTI	GATC	3 cut(s)	640, 646, 1886
BstMAI	GTCTC	9 cut(s)	40, 145, 480, 1133, 1244, 1301, 1450, 1561, 1624
BstMBI	GATC	3 cut(s)	637, 643, 1883
BstMCI	CGRYCG	1 cut(s)	97
BstMWI	GCNNNNNNNGC	7 cut(s)	350, 464, 473, 602, 821, 1369, 1682
BstNI	CCWGG	3 cut(s)	265, 422, 1073
BstPAI	GACNNNNGTC	1 cut(s)	1573
BstSCI	CCNGG	4 cut(s)	263, 420, 798, 1071
BstSFI	CTRYAG	1 cut(s)	856
BstSLI	GKGCMC	1 cut(s)	1150
BstV1I	GCAGC	8 cut(s)	379, 682, 1039, 1487, 1559, 1567, 1669, 1732
BstV2I	GAAGAC	2 cut(s)	698, 1770
BstX2I	RGATCY	2 cut(s)	643, 1883
BstXI	CCANNNNNNTGG	1 cut(s)	1880
BstYI	RGATCY	2 cut(s)	643, 1883
BsuRI	GGCC	6 cut(s)	149, 353, 408, 476, 652, 1853
BtgI	CCRYGG	5 cut(s)	279, 354, 519, 1686, 1747
BtgZI	GCGATG	1 cut(s)	231
BtsCI	GGATG	3 cut(s)	101, 847, 1621
BtsIMutI	CAGTG	2 cut(s)	1148, 1337
Cac8I	GCNNGC	2 cut(s)	339, 1224
CaiI	CAGNNNCTG	1 cut(s)	162
CfoI	GCGC	1 cut(s)	167
Cfr10I	RCCGGY	3 cut(s)	136, 145, 652
Cfr13I	GGNCC	6 cut(s)	148, 292, 433, 1502, 1628, 1751
CseI	GACGC	1 cut(s)	1507
Csp6I	GTAC	2 cut(s)	583, 777
CviQI	GTAC	2 cut(s)	583, 777
DdeI	CTNAG	7 cut(s)	58, 647, 731, 1019, 1392, 1479, 1572
DpnI	GATC	3 cut(s)	639, 645, 1885
DpnII	GATC	3 cut(s)	637, 643, 1883
DraI	TTTAAA	1 cut(s)	1810
DraIII	CACNNNGTG	1 cut(s)	667
Eam1104I	CTCTTC	4 cut(s)	29, 75, 294, 366
EarI	CTCTTC	4 cut(s)	29, 75, 294, 366
EciI	GGCGGA	1 cut(s)	120
Ecl136II	GAGCTC	1 cut(s)	382
Eco130I	CCWWGG	5 cut(s)	279, 354, 477, 519, 1686
Eco147I	AGGCCT	2 cut(s)	476, 1853
Eco24I	GRGCYC	1 cut(s)	384
Eco31I	GGTCTC	3 cut(s)	145, 1450, 1561
Eco47I	GGWCC	5 cut(s)	292, 433, 1502, 1628, 1751
Eco53kI	GAGCTC	1 cut(s)	382
Eco57I	CTGAAG	2 cut(s)	1296, 1782
Eco88I	CYCGRG	1 cut(s)	674
EcoICRI	GAGCTC	1 cut(s)	382
EcoNI	CCTNNNNNAGG	1 cut(s)	299
EcoO109I	RGGNCCY	1 cut(s)	433
EcoRI	GAATTC	2 cut(s)	898, 1233
EcoRII	CCWGG	3 cut(s)	263, 420, 1071
EcoT14I	CCWWGG	5 cut(s)	279, 354, 477, 519, 1686
EcoT22I	ATGCAT	2 cut(s)	847, 988
EcoT38I	GRGCYC	1 cut(s)	384
ErhI	CCWWGG	5 cut(s)	279, 354, 477, 519, 1686
Esp3I	CGTCTC	1 cut(s)	480
FalI	AAGNNNNNCTT	2 cut(s)	321, 353
FaqI	GGGAC	3 cut(s)	807, 1488, 1614
FokI	GGATG	3 cut(s)	88, 854, 1628
FriOI	GRGCYC	1 cut(s)	384
FspBI	CTAG	5 cut(s)	722, 1143, 1355, 1410, 1562
GlaI	GCGC	1 cut(s)	166
GsuI	CTGGAG	1 cut(s)	247
HaeIII	GGCC	6 cut(s)	149, 353, 408, 476, 652, 1853
HapII	CCGG	5 cut(s)	137, 146, 653, 799, 1437
HgaI	GACGC	1 cut(s)	1507
HhaI	GCGC	1 cut(s)	167
Hin1I	GRCGYC	1 cut(s)	1518
Hin6I	GCGC	1 cut(s)	165
HinP1I	GCGC	1 cut(s)	165
HincII	GTYRAC	1 cut(s)	1434
HindII	GTYRAC	1 cut(s)	1434
HindIII	AAGCTT	1 cut(s)	413
HinfI	GANTC	9 cut(s)	48, 179, 311, 359, 727, 852, 874, 1643, 1652
HpaII	CCGG	5 cut(s)	137, 146, 653, 799, 1437
HphI	GGTGA	1 cut(s)	135
Hpy166II	GTNNAC	1 cut(s)	1434
Hpy188I	TCNGA	8 cut(s)	94, 292, 399, 1027, 1276, 1288, 1393, 1888
Hpy188III	TCNNGA	8 cut(s)	78, 176, 219, 641, 1162, 1187, 1238, 1793
Hpy8I	GTNNAC	1 cut(s)	1434
Hpy99I	CGWCG	3 cut(s)	239, 242, 1523
HpyAV	CCTTC	5 cut(s)	419, 466, 856, 961, 1597
HpyCH4III	ACNGT	2 cut(s)	235, 1341
HpyF10VI	GCNNNNNNNGC	7 cut(s)	350, 464, 473, 602, 821, 1369, 1682
HpyF3I	CTNAG	7 cut(s)	58, 647, 731, 1019, 1392, 1479, 1572
Hsp92I	GRCGYC	1 cut(s)	1518
HspAI	GCGC	1 cut(s)	165
KpnI	GGTACC	1 cut(s)	586
Kzo9I	GATC	3 cut(s)	637, 643, 1883
LmnI	GCTCC	5 cut(s)	379, 958, 976, 1219, 1377
Lsp1109I	GCAGC	8 cut(s)	379, 682, 1039, 1487, 1559, 1567, 1669, 1732
LweI	GCATC	4 cut(s)	832, 1039, 1192, 1723
MaeI	CTAG	5 cut(s)	722, 1143, 1355, 1410, 1562
MaeIII	GTNAC	3 cut(s)	990, 1422, 1817
MalI	GATC	3 cut(s)	639, 645, 1885
MboI	GATC	3 cut(s)	637, 643, 1883
MfeI	CAATTG	2 cut(s)	1647, 1799
MflI	RGATCY	2 cut(s)	643, 1883
MhlI	GDGCHC	2 cut(s)	384, 1150
MlyI	GAGTC	5 cut(s)	42, 173, 320, 368, 1661
MmeI	TCCRAC	7 cut(s)	117, 270, 744, 849, 933, 954, 1050
Mph1103I	ATGCAT	2 cut(s)	847, 988
MroXI	GAANNNNTTC	2 cut(s)	10, 1402
MseI	TTAA	8 cut(s)	533, 546, 557, 588, 750, 837, 1343, 1809
MspA1I	CMGCKG	2 cut(s)	1478, 1580
MspI	CCGG	5 cut(s)	137, 146, 653, 799, 1437
MspR9I	CCNGG	4 cut(s)	265, 422, 800, 1073
MunI	CAATTG	2 cut(s)	1647, 1799
MvaI	CCWGG	3 cut(s)	265, 422, 1073
MwoI	GCNNNNNNNGC	7 cut(s)	350, 464, 473, 602, 821, 1369, 1682
NciI	CCSGG	1 cut(s)	800
NcoI	CCATGG	4 cut(s)	279, 354, 519, 1686
NdeII	GATC	3 cut(s)	637, 643, 1883
NlaIV	GGNNCC	4 cut(s)	435, 584, 1504, 1630
NmeAIII	GCCGAG	1 cut(s)	363
NmuCI	GTSAC	1 cut(s)	990
NsiI	ATGCAT	2 cut(s)	847, 988
NspV	TTCGAA	1 cut(s)	369
PaeR7I	CTCGAG	1 cut(s)	674
PasI	CCCWGGG	1 cut(s)	1072
PceI	AGGCCT	2 cut(s)	476, 1853
PdmI	GAANNNNTTC	2 cut(s)	10, 1402
PfeI	GAWTC	4 cut(s)	727, 852, 874, 1643
PleI	GAGTC	5 cut(s)	42, 173, 319, 367, 1660
PpsI	GAGTC	5 cut(s)	42, 173, 319, 367, 1660
PpuMI	RGGWCCY	1 cut(s)	433
PshAI	GACNNNNGTC	1 cut(s)	1573
Psp124BI	GAGCTC	1 cut(s)	384
Psp5II	RGGWCCY	1 cut(s)	433
Psp6I	CCWGG	3 cut(s)	263, 420, 1071
PspGI	CCWGG	3 cut(s)	263, 420, 1071
PspN4I	GGNNCC	4 cut(s)	435, 584, 1504, 1630
PspPI	GGNCC	6 cut(s)	148, 292, 433, 1502, 1628, 1751
PspPPI	RGGWCCY	1 cut(s)	433
PspXI	VCTCGAGB	1 cut(s)	674
PstNI	CAGNNNCTG	1 cut(s)	162
PsuI	RGATCY	2 cut(s)	643, 1883
PvuII	CAGCTG	2 cut(s)	1478, 1580
RsaI	GTAC	2 cut(s)	584, 778
RsaNI	GTAC	2 cut(s)	583, 777
SacI	GAGCTC	1 cut(s)	384
SaqAI	TTAA	8 cut(s)	533, 546, 557, 588, 750, 837, 1343, 1809
Sau3AI	GATC	3 cut(s)	637, 643, 1883
Sau96I	GGNCC	6 cut(s)	148, 292, 433, 1502, 1628, 1751
ScaI	AGTACT	1 cut(s)	778
SchI	GAGTC	5 cut(s)	42, 173, 320, 368, 1661
ScrFI	CCNGG	4 cut(s)	265, 422, 800, 1073
SduI	GDGCHC	2 cut(s)	384, 1150
SfaNI	GCATC	4 cut(s)	832, 1039, 1192, 1723
SfcI	CTRYAG	1 cut(s)	856
Sfr274I	CTCGAG	1 cut(s)	674
SfuI	TTCGAA	1 cut(s)	369
SinI	GGWCC	5 cut(s)	292, 433, 1502, 1628, 1751
SlaI	CTCGAG	1 cut(s)	674
SmlI	CTYRAG	3 cut(s)	410, 674, 1364
SmoI	CTYRAG	3 cut(s)	410, 674, 1364
SseBI	AGGCCT	2 cut(s)	476, 1853
SsiI	CCGC	5 cut(s)	97, 131, 134, 341, 495
SspMI	CTAG	5 cut(s)	722, 1143, 1355, 1410, 1562
SstI	GAGCTC	1 cut(s)	384
StuI	AGGCCT	2 cut(s)	476, 1853
StyD4I	CCNGG	4 cut(s)	263, 420, 798, 1071
StyI	CCWWGG	5 cut(s)	279, 354, 477, 519, 1686
TaaI	ACNGT	2 cut(s)	235, 1341
TaqI	TCGA	8 cut(s)	220, 240, 309, 327, 369, 675, 1163, 1794
TatI	WGTACW	1 cut(s)	776
TauI	GCSGC	2 cut(s)	136, 344
TfiI	GAWTC	4 cut(s)	727, 852, 874, 1643
Tru1I	TTAA	8 cut(s)	533, 546, 557, 588, 750, 837, 1343, 1809
Tru9I	TTAA	8 cut(s)	533, 546, 557, 588, 750, 837, 1343, 1809
TscAI	CASTG	2 cut(s)	1155, 1344
TseFI	GTSAC	1 cut(s)	990
TseI	GCWGC	8 cut(s)	392, 670, 1052, 1475, 1547, 1580, 1682, 1720
Tsp45I	GTSAC	1 cut(s)	990
TspDTI	ATGAA	3 cut(s)	242, 1328, 1851
TspGWI	ACGGA	1 cut(s)	1764
TspRI	CASTG	2 cut(s)	1155, 1344
VpaK11BI	GGWCC	5 cut(s)	292, 433, 1502, 1628, 1751
XagI	CCTNNNNNAGG	1 cut(s)	299
XapI	RAATTY	5 cut(s)	255, 898, 1233, 1805, 1838
XhoI	CTCGAG	1 cut(s)	674
XmnI	GAANNNNTTC	2 cut(s)	10, 1402
XspI	CTAG	5 cut(s)	722, 1143, 1355, 1410, 1562
ZrmI	AGTACT	1 cut(s)	778
Zsp2I	ATGCAT	2 cut(s)	847, 988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.