Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr3

Orthogroup ID

OG0013105

Physical Location & Seq

Genomic Coordinates Forward (+)

18517733 .. 18519905

Gene Structure 2173 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000012409

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1905 bp

ATGAGAAAGTCTTCAATCTCACTCTTCTCCCATCTCAGTCGTCGGAGTTCCAAATCCTTTGCTCCTCTTCTATCCAGAAATTACATAACTTCTGACCCTCTCTCTTCCTCTTCATCTTCTTCTTCGCCGACCCGGTTCAGGTCCTGCACCAAACTCCATGGCTTGGTCTTCAAAAACACCCAATTCCAAGCAAACCCATCTCGAAACATGGACACCCTCGCGCCTCAAATGTCCTCAAGGCAGAGAAAAATCAAGGAAAGGTCCGAGCTTGAAGACGCATTTGAATCAGCGACTACTTCCGAAGAGATGCGTAGGGCTTTCAAGGAAATGGAGTCGGTTTTCGGAGAGAAAGAGCTGGCCTTGGCTTGTTTGAAACTTGGGCTCAAGCTTGACCAAGAAGGTGAGGACCCTGAACAGACTCTGTCTTTTGCTACTAGAGCCTTTAATGCTTTTGATAAAGAAGGTCGTGGTAGTGATAGTAGTAGTGGTAATAAGCCTTCGTTTCTTGTTGCAATGGCTTTACAATTGATGGGTTCTGCTAATTATAGCTTGAAAAGGTTTAATGATAGTTTGGGGTATCTGAATAGGGCTAATAGGATGTTGGGTAGGTTAGAGGAGGAGGGTTGTAATGTTGGGGATATTAGGCCGGTGCTTCATGCCGTGCAGTTGGAGTTGGCGAATGTGAAGACGGCGATGGGTAGGAGAGAGGAGGCTGTTGAGAATCTGAGGAAGTGTTTGGAGATTAAGGAGGTGATGTTGGAGAAAGATAGTAAGGAACTTGGCAAGGCCAACCGGGACTTGGCTGAGGCTTATGTTGCGGTTTTGAACTTTAAGGAGGCGTTGGGATTCTGTAGGAAGGCATTGGAGATTCATAAAGAACAGTTGGGGCAGAACTCAGTGGAGGTTGCACATGACAGGAGGCTTCTTGGGGTTATTTATACCGGACTGGAGGAGCATGAGAAGGCCTTGGAGCAAAACATGTTGTCACAGAAGGTTTTGAAGAATTGGGGTCTTGGTTCTGATTTGCTTCGTGCGGAGATTGATTCTGCGAATATGCAGATTGCACTGGGGAAGTATGATGACGCTACTAATACTTTGAAGGGTGTTGTTCAGCAAACGGATAAGGATAGTGAGACAAGGGCACTAGTGTTTATCTCGATGGGAAAAGCATTATGTAATCAGGAGAAGTTTTCGGATGCAAAGAGATGTCTGGAGATTGCTTGTGGAATTCTTGACAAGAAAGAGAGAGCCGCCCCGGTAGATGTTGCCGAGGCATACTCAGAAATATCAATGCAATACGAGACAATGAACGAGTTTGAAACTGCAATTTCACTGTTAAAGAGGACATTGGCATTGCTTGAGAAGCTCCCTCAAGAACAACATTCTGAGGGAAGTGTTTCTGCTAGGATAGGGTGGTTACTTTTGTTGACTGGCAAGGTCTCACAGGCTATTCCGTACTTGGAGAGTGCGGCTGAGAGATTGAAAGAGAGCTTTGGTCCCAAGCATTTTGGTGTGGGCTATATTTACAACAACTTGGGGGCAGCATATTTGGAACTAGACCGGCCTCAGTCAGCTGCACAGATGTTTGCTGTTGCAAAGGACATCATGGATGTCGCACTCGGTCCACATCATGCAGATTCAATTGAGGCATGCCAGAACCTCTCAAAAGCATATGATGCCATGAAAAGCTATGCCCTTGCAATCCAATTCCAGCAGCAAGTAGTTGATGCTTGGGAGAACCATGGACCAAGTGCTCATGACGAACTCAGAGAAGCACAGCGACTTCTTGAAGAGTTGAGGAAAAAAGCCCGTGGGACATTCTTAAATGATGAGCGAACCATCAAGGCCTTGCCCTTGCCCCAAACTCATCCATCTGCCAGGAGCTCACAAGCTGACTTCCTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005929 GO:0006996 GO:0008150 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016043 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030178 GO:0042995 GO:0043226 GO:0044085 GO:0044464 GO:0044782 GO:0048519 GO:0048523 GO:0048583 GO:0048585 GO:0050789 GO:0050793 GO:0050794 GO:0051239 GO:0060271 GO:0060828 GO:0065007 GO:0070925 GO:0071840 GO:0090090 GO:0090175 GO:0120025 GO:0120031 GO:0120036 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

TPR_10 TPR_12 TPR_8

Protein Analysis

635

Amino Acids

70.74

Weight (kDa)

6.41

Isoelectric Point (pI)

44.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TPR_NPHP3	PF24885	230 - 325	1.3e-10	Nephrocystin-3 TPR domain
TPR_12	PF13424	263 - 325	1.1e-07	Tetratricopeptide repeat
TPR_12	PF13424	421 - 495	3.9e-06	Tetratricopeptide repeat
TPR_12	PF13424	474 - 535	3.9e-09	Tetratricopeptide repeat
TPR_12	PF13424	508 - 579	3.2e-08	Tetratricopeptide repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0013105)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G31240
fragaria_vesca	FvH4_2g21700 FvH4_2g21700 FvH4_2g21700
malus_domestica	MD05G1199500.v1.1
prunus_persica	Prupe.8G225300_v2.0.a1
pyrus_communis	pycom05g18590 pycom10g16070
rosa_chinensis	RchiOBHm_Chr6g0288381
rosa_laevigata	RLG00000012409
rosa_multiflora	Rmu_sc0001038.1_g000010
rosa_roxburghii	Rroxscaffold_7G00180110
rosa_rugosa	Rorug06G0196100
rosa_samantha	Rh6AG307000 Rh6BG313000 Rh6CG320800 Rh6DG306200
rosa_wichuraiana	Rw6G026560

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	163
AccII	CGCG	1 cut(s)	221
AciI	CCGC	4 cut(s)	818, 1034, 1251, 1469
AcsI	RAATTY	1 cut(s)	1227
AfaI	GTAC	1 cut(s)	1457
AfiI	CCNNNNNNNGG	3 cut(s)	138, 163, 799
AflIII	ACRYGT	1 cut(s)	978
AhlI	ACTAGT	1 cut(s)	1144
AjnI	CCWGG	1 cut(s)	1877
Alw21I	GWGCWC	2 cut(s)	1756, 1886
Alw26I	GTCTC	3 cut(s)	1127, 1295, 1444
AlwNI	CAGNNNCTG	2 cut(s)	144, 421
AoxI	GGCC	6 cut(s)	357, 644, 786, 963, 1562, 1845
ApeKI	GCWGC	3 cut(s)	1541, 1574, 1714
ApoI	RAATTY	1 cut(s)	1227
Asp700I	GAANNNNTTC	2 cut(s)	10, 1396
AspLEI	GCGC	1 cut(s)	223
AspS9I	GGNCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
AsuC2I	CCSGG	3 cut(s)	133, 794, 1256
AsuHPI	GGTGA	2 cut(s)	413, 763
AvaII	GGWCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
BaeGI	GKGCMC	1 cut(s)	1144
BanII	GRGCYC	2 cut(s)	384, 1886
BarI	GAAGNNNNNNTAC	2 cut(s)	481, 513
BbsI	GAAGAC	4 cut(s)	3, 160, 279, 692
Bbv12I	GWGCWC	2 cut(s)	1756, 1886
BbvCI	CCTCAGC	1 cut(s)	804
BbvI	GCAGC	3 cut(s)	1553, 1561, 1726
BccI	CCATC	7 cut(s)	39, 205, 523, 688, 1153, 1847, 1879
BceAI	ACGGC	2 cut(s)	644, 705
BciT130I	CCWGG	1 cut(s)	1879
BcnI	CCSGG	3 cut(s)	133, 794, 1256
BcoDI	GTCTC	3 cut(s)	1127, 1295, 1444
BcuI	ACTAGT	1 cut(s)	1144
BfaI	CTAG	4 cut(s)	435, 1145, 1404, 1556
BfmI	CTRYAG	1 cut(s)	850
BisI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
BlsI	GCNGC	5 cut(s)	1252, 1471, 1543, 1576, 1716
Bme1390I	CCNGG	4 cut(s)	133, 794, 1256, 1879
Bme18I	GGWCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
BmgT120I	GGNCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
BmiI	GGNNCC	2 cut(s)	408, 1498
BmrFI	CCNGG	4 cut(s)	133, 794, 1256, 1879
BmrI	ACTGGG	1 cut(s)	1076
BmsI	GCATC	4 cut(s)	297, 1186, 1666, 1717
BmuI	ACTGGG	1 cut(s)	1076
BpiI	GAAGAC	4 cut(s)	3, 160, 279, 692
BplI	GAGNNNNNCTC	2 cut(s)	1262, 1294
BpmI	CTGGAG	2 cut(s)	968, 1232
Bpu10I	CCTNAGC	1 cut(s)	804
BpuEI	CTTGAG	4 cut(s)	220, 368, 1356, 1379
BpuMI	CCSGG	3 cut(s)	133, 794, 1256
BsaI	GGTCTC	1 cut(s)	1444
BsaJI	CCNNGG	7 cut(s)	157, 360, 966, 1254, 1269, 1741, 1810
BsaWI	WCCGGW	1 cut(s)	941
BsaXI	ACNNNNNCTCC	2 cut(s)	740, 770
Bsc4I	CCNNNNNNNGG	3 cut(s)	138, 163, 799
Bse118I	RCCGGY	2 cut(s)	646, 1560
Bse1I	ACTGG	3 cut(s)	951, 1071, 1435
Bse3DI	GCAATG	2 cut(s)	519, 1352
BseBI	CCWGG	1 cut(s)	1879
BseDI	CCNNGG	7 cut(s)	157, 360, 966, 1254, 1269, 1741, 1810
BseGI	GGATG	4 cut(s)	603, 1201, 1615, 1867
BseLI	CCNNNNNNNGG	3 cut(s)	138, 163, 799
BseMI	GCAATG	2 cut(s)	519, 1352
BseMII	CTCAG	9 cut(s)	49, 716, 795, 909, 1293, 1377, 1464, 1580, 1780
BseNI	ACTGG	3 cut(s)	951, 1071, 1435
BseRI	GAGGAG	5 cut(s)	54, 629, 632, 722, 965
BseSI	GKGCMC	1 cut(s)	1144
BseXI	GCAGC	3 cut(s)	1553, 1561, 1726
BsgI	GTGCAG	3 cut(s)	130, 683, 1560
Bsh1236I	CGCG	1 cut(s)	221
BshFI	GGCC	6 cut(s)	359, 646, 788, 965, 1564, 1847
BsiHKAI	GWGCWC	2 cut(s)	1756, 1886
BsiSI	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
BslFI	GGGAC	3 cut(s)	809, 1482, 1828
BslI	CCNNNNNNNGG	3 cut(s)	138, 163, 799
BsmAI	GTCTC	3 cut(s)	1127, 1295, 1444
BsmFI	GGGAC	3 cut(s)	809, 1482, 1828
BsnI	GGCC	6 cut(s)	359, 646, 788, 965, 1564, 1847
Bso31I	GGTCTC	1 cut(s)	1444
Bsp1286I	GDGCHC	4 cut(s)	384, 1144, 1756, 1886
Bsp19I	CCATGG	2 cut(s)	157, 1741
BspACI	CCGC	4 cut(s)	818, 1034, 1251, 1469
BspANI	GGCC	6 cut(s)	359, 646, 788, 965, 1564, 1847
BspCNI	CTCAG	9 cut(s)	48, 717, 796, 908, 1292, 1378, 1465, 1579, 1779
BspFNI	CGCG	1 cut(s)	221
BspHI	TCATGA	1 cut(s)	1756
BspLI	GGNNCC	2 cut(s)	408, 1498
BspTNI	GGTCTC	1 cut(s)	1444
BsrDI	GCAATG	2 cut(s)	519, 1352
BsrFI	RCCGGY	2 cut(s)	646, 1560
BsrI	ACTGG	3 cut(s)	951, 1071, 1435
BssAI	RCCGGY	2 cut(s)	646, 1560
BssECI	CCNNGG	7 cut(s)	157, 360, 966, 1254, 1269, 1741, 1810
BssT1I	CCWWGG	4 cut(s)	157, 360, 966, 1741
Bst2UI	CCWGG	1 cut(s)	1879
Bst4CI	ACNGT	2 cut(s)	882, 1335
Bst6I	CTCTTC	6 cut(s)	29, 72, 109, 115, 297, 1785
BstAPI	GCANNNNNTGC	1 cut(s)	1676
BstC8I	GCNNGC	2 cut(s)	357, 1651
BstDEI	CTNAG	9 cut(s)	35, 725, 804, 895, 1279, 1386, 1473, 1566, 1766
BstDSI	CCRYGG	3 cut(s)	157, 1741, 1810
BstF5I	GGATG	4 cut(s)	603, 1201, 1615, 1867
BstFNI	CGCG	1 cut(s)	221
BstHHI	GCGC	1 cut(s)	223
BstMAI	GTCTC	3 cut(s)	1127, 1295, 1444
BstMWI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
BstNI	CCWGG	1 cut(s)	1879
BstNSI	RCATGY	2 cut(s)	982, 1653
BstSCI	CCNGG	4 cut(s)	131, 792, 1254, 1877
BstSFI	CTRYAG	1 cut(s)	850
BstSLI	GKGCMC	1 cut(s)	1144
BstUI	CGCG	1 cut(s)	221
BstV1I	GCAGC	3 cut(s)	1553, 1561, 1726
BstV2I	GAAGAC	4 cut(s)	3, 160, 279, 692
BsuRI	GGCC	6 cut(s)	359, 646, 788, 965, 1564, 1847
BtgI	CCRYGG	3 cut(s)	157, 1741, 1810
BtgZI	GCGATG	1 cut(s)	707
BtsCI	GGATG	4 cut(s)	603, 1201, 1615, 1867
BtsIMutI	CAGTG	3 cut(s)	903, 1064, 1331
Cac8I	GCNNGC	2 cut(s)	357, 1651
CaiI	CAGNNNCTG	2 cut(s)	144, 421
CciI	TCATGA	1 cut(s)	1756
CfoI	GCGC	1 cut(s)	223
Cfr10I	RCCGGY	2 cut(s)	646, 1560
Cfr13I	GGNCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
CseI	GACGC	2 cut(s)	284, 1091
Csp6I	GTAC	1 cut(s)	1456
CviQI	GTAC	1 cut(s)	1456
DdeI	CTNAG	9 cut(s)	35, 725, 804, 895, 1279, 1386, 1473, 1566, 1766
Eam1104I	CTCTTC	6 cut(s)	29, 72, 109, 115, 297, 1785
EarI	CTCTTC	6 cut(s)	29, 72, 109, 115, 297, 1785
Ecl136II	GAGCTC	1 cut(s)	1884
Eco130I	CCWWGG	4 cut(s)	157, 360, 966, 1741
Eco147I	AGGCCT	2 cut(s)	965, 1847
Eco24I	GRGCYC	2 cut(s)	384, 1886
Eco31I	GGTCTC	1 cut(s)	1444
Eco47I	GGWCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
Eco53kI	GAGCTC	1 cut(s)	1884
EcoICRI	GAGCTC	1 cut(s)	1884
EcoO109I	RGGNCCY	2 cut(s)	141, 406
EcoRI	GAATTC	1 cut(s)	1227
EcoRII	CCWGG	1 cut(s)	1877
EcoT14I	CCWWGG	4 cut(s)	157, 360, 966, 1741
EcoT38I	GRGCYC	2 cut(s)	384, 1886
ErhI	CCWWGG	4 cut(s)	157, 360, 966, 1741
FaqI	GGGAC	3 cut(s)	809, 1482, 1828
FauNDI	CATATG	1 cut(s)	1672
Fnu4HI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
FokI	GGATG	4 cut(s)	610, 1208, 1622, 1854
FriOI	GRGCYC	2 cut(s)	384, 1886
Fsp4HI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
FspBI	CTAG	4 cut(s)	435, 1145, 1404, 1556
GlaI	GCGC	1 cut(s)	222
GluI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
GsuI	CTGGAG	2 cut(s)	968, 1232
HaeIII	GGCC	6 cut(s)	359, 646, 788, 965, 1564, 1847
HapII	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
HgaI	GACGC	2 cut(s)	284, 1091
HhaI	GCGC	1 cut(s)	223
Hin6I	GCGC	1 cut(s)	221
HinP1I	GCGC	1 cut(s)	221
HincII	GTYRAC	1 cut(s)	1428
HindII	GTYRAC	1 cut(s)	1428
HindIII	AAGCTT	1 cut(s)	386
HinfI	GANTC	8 cut(s)	284, 332, 418, 721, 846, 868, 1043, 1637
HpaII	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
HphI	GGTGA	2 cut(s)	413, 763
Hpy166II	GTNNAC	2 cut(s)	1428, 1625
Hpy188III	TCNNGA	9 cut(s)	75, 201, 1156, 1181, 1211, 1232, 1373, 1757, 1787
Hpy8I	GTNNAC	2 cut(s)	1428, 1625
Hpy99I	CGWCG	1 cut(s)	45
HpyAV	CCTTC	7 cut(s)	392, 455, 507, 850, 955, 985, 1093
HpyCH4III	ACNGT	2 cut(s)	882, 1335
HpyF10VI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
HpyF3I	CTNAG	9 cut(s)	35, 725, 804, 895, 1279, 1386, 1473, 1566, 1766
HspAI	GCGC	1 cut(s)	221
LmnI	GCTCC	5 cut(s)	67, 952, 970, 1371, 1881
Lsp1109I	GCAGC	3 cut(s)	1553, 1561, 1726
LweI	GCATC	4 cut(s)	297, 1186, 1666, 1717
MaeI	CTAG	4 cut(s)	435, 1145, 1404, 1556
MaeIII	GTNAC	2 cut(s)	984, 1416
MfeI	CAATTG	2 cut(s)	524, 1641
MhlI	GDGCHC	4 cut(s)	384, 1144, 1756, 1886
MluCI	AATT	9 cut(s)	79, 182, 524, 541, 1003, 1227, 1326, 1641, 1706
MlyI	GAGTC	2 cut(s)	341, 412
MmeI	TCCRAC	3 cut(s)	23, 648, 738
MroXI	GAANNNNTTC	2 cut(s)	10, 1396
MseI	TTAA	6 cut(s)	444, 561, 744, 831, 1337, 1823
MslI	CAYNNNNRTG	1 cut(s)	1509
MspA1I	CMGCKG	1 cut(s)	1574
MspI	CCGG	6 cut(s)	133, 647, 793, 942, 1256, 1561
MspR9I	CCNGG	4 cut(s)	133, 794, 1256, 1879
MunI	CAATTG	2 cut(s)	524, 1641
MvaI	CCWGG	1 cut(s)	1879
MvnI	CGCG	1 cut(s)	221
MwoI	GCNNNNNNNGC	5 cut(s)	437, 446, 815, 1363, 1676
NciI	CCSGG	3 cut(s)	133, 794, 1256
NcoI	CCATGG	2 cut(s)	157, 1741
NdeI	CATATG	1 cut(s)	1672
NlaIV	GGNNCC	2 cut(s)	408, 1498
NmeAIII	GCCGAG	1 cut(s)	1294
NmuCI	GTSAC	1 cut(s)	984
NspI	RCATGY	2 cut(s)	982, 1653
PaeI	GCATGC	1 cut(s)	1653
PagI	TCATGA	1 cut(s)	1756
PceI	AGGCCT	2 cut(s)	965, 1847
PciI	ACATGT	1 cut(s)	978
PdmI	GAANNNNTTC	2 cut(s)	10, 1396
PfeI	GAWTC	6 cut(s)	284, 721, 846, 868, 1043, 1637
PflFI	GACNNNGTC	1 cut(s)	421
PflMI	CCANNNNNTGG	1 cut(s)	163
PkrI	GCNGC	5 cut(s)	1252, 1471, 1543, 1576, 1716
PleI	GAGTC	2 cut(s)	340, 412
PpsI	GAGTC	2 cut(s)	340, 412
PpuMI	RGGWCCY	2 cut(s)	141, 406
PscI	ACATGT	1 cut(s)	978
Psp124BI	GAGCTC	1 cut(s)	1886
Psp5II	RGGWCCY	2 cut(s)	141, 406
Psp6I	CCWGG	1 cut(s)	1877
PspGI	CCWGG	1 cut(s)	1877
PspN4I	GGNNCC	2 cut(s)	408, 1498
PspPI	GGNCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
PspPPI	RGGWCCY	2 cut(s)	141, 406
PstNI	CAGNNNCTG	2 cut(s)	144, 421
PsyI	GACNNNGTC	1 cut(s)	421
PvuII	CAGCTG	1 cut(s)	1574
RsaI	GTAC	1 cut(s)	1457
RsaNI	GTAC	1 cut(s)	1456
RseI	CAYNNNNRTG	1 cut(s)	1509
SacI	GAGCTC	1 cut(s)	1886
SaqAI	TTAA	6 cut(s)	444, 561, 744, 831, 1337, 1823
SatI	GCNGC	5 cut(s)	1251, 1470, 1542, 1575, 1715
Sau96I	GGNCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
SchI	GAGTC	2 cut(s)	341, 412
ScrFI	CCNGG	4 cut(s)	133, 794, 1256, 1879
SduI	GDGCHC	4 cut(s)	384, 1144, 1756, 1886
SfaNI	GCATC	4 cut(s)	297, 1186, 1666, 1717
SfcI	CTRYAG	1 cut(s)	850
SinI	GGWCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
SmiMI	CAYNNNNRTG	1 cut(s)	1509
SmlI	CTYRAG	4 cut(s)	235, 383, 1358, 1371
SmoI	CTYRAG	4 cut(s)	235, 383, 1358, 1371
SpeI	ACTAGT	1 cut(s)	1144
SphI	GCATGC	1 cut(s)	1653
Sse9I	AATT	9 cut(s)	79, 182, 524, 541, 1003, 1227, 1326, 1641, 1706
SseBI	AGGCCT	2 cut(s)	965, 1847
SsiI	CCGC	4 cut(s)	818, 1034, 1251, 1469
SspMI	CTAG	4 cut(s)	435, 1145, 1404, 1556
SstI	GAGCTC	1 cut(s)	1886
StuI	AGGCCT	2 cut(s)	965, 1847
StyD4I	CCNGG	4 cut(s)	131, 792, 1254, 1877
StyI	CCWWGG	4 cut(s)	157, 360, 966, 1741
TaaI	ACNGT	2 cut(s)	882, 1335
TaqI	TCGA	2 cut(s)	202, 1157
TaqII	GACCGA	1 cut(s)	1610
TasI	AATT	9 cut(s)	79, 182, 524, 541, 1003, 1227, 1326, 1641, 1706
TauI	GCSGC	2 cut(s)	1253, 1472
TfiI	GAWTC	6 cut(s)	284, 721, 846, 868, 1043, 1637
Tru1I	TTAA	6 cut(s)	444, 561, 744, 831, 1337, 1823
Tru9I	TTAA	6 cut(s)	444, 561, 744, 831, 1337, 1823
TscAI	CASTG	3 cut(s)	903, 1071, 1338
TseFI	GTSAC	1 cut(s)	984
TseI	GCWGC	3 cut(s)	1541, 1574, 1714
Tsp45I	GTSAC	1 cut(s)	984
TspDTI	ATGAA	5 cut(s)	102, 644, 860, 1322, 1697
TspGWI	ACGGA	2 cut(s)	1133, 1443
TspRI	CASTG	3 cut(s)	903, 1071, 1338
Tth111I	GACNNNGTC	1 cut(s)	421
Van91I	CCANNNNNTGG	1 cut(s)	163
VpaK11BI	GGWCC	6 cut(s)	141, 261, 406, 1496, 1622, 1745
XapI	RAATTY	1 cut(s)	1227
XceI	RCATGY	2 cut(s)	982, 1653
XcmI	CCANNNNNNNNNTGG	1 cut(s)	796
XmnI	GAANNNNTTC	2 cut(s)	10, 1396
XspI	CTAG	4 cut(s)	435, 1145, 1404, 1556

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.