Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr5

Orthogroup ID

OG0010016

Physical Location & Seq

Genomic Coordinates Reverse (-)

25947594 .. 25954100

Gene Structure 6507 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom05g24370.13

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2319 bp

ATGACCATGGTATGGCTCAATGATTCAATAATTGTCAGTACGGTTAATGGATATAGTTTGTTTTCATGTGTTACTGGACAAAGTGGTGTAATATTTTCGCTACCGGATGTTTGTAGTCTGCCACGGCTTAAATTGTTGTGTAAAGAATGGAATGTGCTTTTGTTGGTGGACAATGTTGGTATCATAGCTAATGCACATGGGCAGCCAGTTGGTGGTAGCTTGGTGTTCCATAGTGACCTGGATTCTATTGGGGAGATATCTTCATATGTGGTTATTGCAAGGGATGGAAAGCTGGAGTTGTATCATAAGAAAACAGGCAGATGTATTCAGATGATCACTTTTGGTGGTGAAGGGGTAGGAGGGCCTTGCATTGTTGCAGATGAGGAAGATGGAAGTGGAAAACTTGTAGTTGTTGCAACCCCCATGAAGGTTGTTTGCTATCGGAAATTACCCTCTGAAGAACAAATTAAAGATCTATTGAGAAAAAAGAACTTCAAGGAGGCCATCTCCTTGGTGGAGGACCTTGAGTGTGAGGGTGAACTATCAAAGGATATGCTCTCATTTGTTCATGCTCAAGTGGGGTTTCTCTTACTTTTTGACTTACATTTTGAGGAAGCAGTGAATCACTTTCTGCAGTCTGAGACAATGCAGCCTTCTGAAGTATTTCCATTCATAATGAGAGATCCAAATCAATGGTCACTATTGGTTCCTAGAAACCGTTATTGGGGTTTGCATCCGCCCCCTGCACCCCTGGAAGATGTTGTAGATGACGGGTTGATGGCAATTCAAAGAGCAATCTTTCTTAGGAGAGCAGGTGTAGAAACTGTGGTAGATGACACATTTCTCCTGAACCCTCCAAGCAGGGATAATTTGTTGGAGTCTGCCATCAAATCAATTACTAGGTATTTGGAGGTGTCTTGTGAGAAAGAGTTGACTCCATCAGTGAAGGAGGGAGTTGACACCCTATTAATGTACCTCTATAGAGCTTTGAATAATGTTTATGACATGGAGAAGCTGGCATCATCAACGAATTCTTGCGTTGTGGAAGAGTTGGAAACTTTGTTAGATGACTCCGGGCATTTACGTACGCTTGCGTTCCTATATGCAAGTAAAGGAATTAGCTCAAAGGCTCTTGCTATCTGGCGCATCTTGGCAAGAAATTATTCCTCTGGCCTTTGGAAAGACCCCATGTCGGAGAGTGGCTCACAGGATGGTGGTACAAGTATCATCTCTGGTAAGGAGACTGCTGCAGCTGAGGCATCAAAGCTTCTCGAGGAGTCATCTGATCCAGCGCTTGTTCTACAACATCTTGGATGGGTTGCAGATATCAACCAGGTTTTTGCAGTTCAGGTTTTGACATCAGAGAAAAGAACTAATCAACTTTCACCAGATGAAGTTATTGCAGCTATTGATCCAAAGAAGGTAGAGATTTTTCAAAGGTATCTTCAGTGGTTGATTGAAGATCAAGAATACAGTGACAGTCAGTTCCACACGTTATATGCTCTCTCACTTGCCAAGTCAGCAATTGAAGCTTTTCAAGCAGAAATTGCCTCCCAAAACCCTGATCCTCGAAGAATACAAGAGACAAACATTTCAGATAATAGAATAAGTTTAATCTTTCAAAGTCCTGTTCGGGAAAGACTGCAGATATTTTTGGAGTCTTCAGACTTGTATGACCCAGAGGAGGTTCTTGACTTGATCGAGGGATCAGAATTGTGGTCAGAGAAGGCTATTCTTTACAACAAACTAGGGCAAGAGGCATTGGTGCTCCAAATTTTAGCATTGAAGCTGGAAAACAGTGAAGCTGCTGAGAAATATTGTGCTGAGATTGGGAGACCAGATGTCTATATGCAGTTACTTGATATGTATTTGGATCCACAAGATGGTAAGGAGCCTATGTTTAAAGCTGCTGTTCGCCTACTCCACAATCATGGGGAATCATTGGATCCTCTGCAAGTTTTAGAGAGATTGTCGCCAGATATGCCTCTTCAACTTGCCTCTGAGACTATATTAAGAATGTTGAGAGCTCGACTTCATCATCACCGTCAAGGACGGATTGTGCACAATCTGTCCCGTGCCTTAGGTACCGATGCAAGTTTAGCAATACTGGAGGAAAAGTCAAGGCATGTGCAGATCAATGATGAAAGCCTTTGTGATTCTTGTCATGCACGCCTTGGAACTAAACTTTTTGCTATGTACCCAGATGACACCATAGTCTGTTACAAGTGTTTCCGTCGTCAGGGTGAATCTACATCAGTAACTGGTCGCAACTTTAAGCAAGATGTCCTAGTGAAACCGGGTTGGCTTGTGACCAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0023052 GO:0046332 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

CNH Clathrin Vps39_1 Vps39_2

Protein Analysis

773

Amino Acids

86.55

Weight (kDa)

5.04

Isoelectric Point (pI)

44.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22860
fragaria_vesca	FvH4_3g11790
malus_domestica	MD05G1259300.v1.1 MD10G1238900.v1.1
prunus_persica	Prupe.4G105500_v2.0.a1 Prupe.4G105500_v2.0.a1 Prupe.4G105500_v2.0.a1
pyrus_communis	pycom05g24370 pycom10g19990
rosa_chinensis	RchiOBHm_Chr5g0019211
rosa_laevigata	RLG00000032428
rosa_multiflora	Rmu_co8432961.1_g000001 Rmu_sc0002561.1_g000003
rosa_roxburghii	Rroxscaffold_1G00058780 Rroxscaffold_1G00074160
rosa_rugosa	Rorug05G0048300
rosa_samantha	Rh5AG139700 Rh5BG138700 Rh5CG150100 Rh5DG139300
rosa_wichuraiana	Rw5G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	803
AasI	GACNNNNNNGTC	1 cut(s)	2213
Acc36I	ACCTGC	1 cut(s)	803
Acc65I	GGTACC	1 cut(s)	2084
AccB1I	GGYRCC	1 cut(s)	2084
AccB7I	CCANNNNNTGG	3 cut(s)	12, 212, 1883
AciI	CCGC	1 cut(s)	737
AclWI	GGATC	9 cut(s)	677, 1280, 1406, 1559, 1714, 1868, 1881, 1940, 1953
AcsI	RAATTY	2 cut(s)	1030, 1773
AcuI	CTGAAG	4 cut(s)	477, 678, 1430, 1647
AfaI	GTAC	6 cut(s)	40, 974, 1087, 1219, 2086, 2198
AfeI	AGCGCT	1 cut(s)	1293
AfiI	CCNNNNNNNGG	8 cut(s)	12, 212, 427, 724, 1192, 1684, 1883, 2239
AflIII	ACRYGT	1 cut(s)	1491
AhdI	GACNNNNNGTC	2 cut(s)	1189, 1841
AjnI	CCWGG	4 cut(s)	237, 750, 1332, 2312
AjuI	GAANNNNNNNTTGG	2 cut(s)	706, 738
Alw21I	GWGCWC	3 cut(s)	1770, 2029, 2064
Alw26I	GTCTC	5 cut(s)	635, 1235, 1577, 1828, 1997
Alw44I	GTGCAC	1 cut(s)	2060
AlwI	GGATC	9 cut(s)	677, 1280, 1406, 1559, 1714, 1868, 1881, 1940, 1953
AlwNI	CAGNNNCTG	1 cut(s)	2261
Ama87I	CYCGRG	1 cut(s)	1271
Aor51HI	AGCGCT	1 cut(s)	1293
AoxI	GGCC	3 cut(s)	362, 501, 1171
ApaLI	GTGCAC	1 cut(s)	2060
ApeKI	GCWGC	7 cut(s)	202, 649, 1247, 1250, 1403, 1805, 1907
ApoI	RAATTY	2 cut(s)	1030, 1773
ArsI	GACNNNNNNTTYG	4 cut(s)	590, 622, 680, 712
AseI	ATTAAT	1 cut(s)	968
Asp700I	GAANNNNTTC	3 cut(s)	663, 1162, 1533
Asp718I	GGTACC	1 cut(s)	2084
AspLEI	GCGC	2 cut(s)	1146, 1294
AspS9I	GGNCC	2 cut(s)	362, 520
AsuC2I	CCSGG	2 cut(s)	1075, 2298
AsuHPI	GGTGA	5 cut(s)	359, 548, 1377, 2033, 2255
AvaI	CYCGRG	1 cut(s)	1271
AvaII	GGWCC	1 cut(s)	520
AxyI	CCTNAGG	1 cut(s)	2080
BaeGI	GKGCMC	1 cut(s)	2064
BamHI	GGATCC	2 cut(s)	1873, 1945
BanI	GGYRCC	1 cut(s)	2084
BanII	GRGCYC	1 cut(s)	2029
BbsI	GAAGAC	1 cut(s)	1653
Bbv12I	GWGCWC	3 cut(s)	1770, 2029, 2064
BbvCI	CCTCAGC	1 cut(s)	1254
BbvI	GCAGC	7 cut(s)	214, 661, 1234, 1262, 1415, 1792, 1894
BccI	CCATC	9 cut(s)	278, 383, 512, 772, 893, 946, 1205, 1308, 1877
BceAI	ACGGC	1 cut(s)	140
BciT130I	CCWGG	4 cut(s)	239, 752, 1334, 2314
BclI	TGATCA	1 cut(s)	333
BcnI	CCSGG	2 cut(s)	1075, 2298
BcoDI	GTCTC	5 cut(s)	635, 1235, 1577, 1828, 1997
BfaI	CTAG	4 cut(s)	711, 900, 1748, 2288
BfmI	CTRYAG	4 cut(s)	632, 979, 1248, 1643
BfoI	RGCGCY	1 cut(s)	1295
BfuAI	ACCTGC	1 cut(s)	803
BglII	AGATCT	1 cut(s)	472
BisI	GCNGC	7 cut(s)	203, 650, 1248, 1251, 1404, 1806, 1908
BlsI	GCNGC	7 cut(s)	204, 651, 1249, 1252, 1405, 1807, 1909
Bme1390I	CCNGG	6 cut(s)	239, 752, 1075, 1334, 2298, 2314
Bme18I	GGWCC	1 cut(s)	520
BmeRI	GACNNNNNGTC	2 cut(s)	1189, 1841
BmeT110I	CYCGRG	1 cut(s)	1271
BmgT120I	GGNCC	2 cut(s)	362, 520
BmiI	GGNNCC	5 cut(s)	708, 1875, 1893, 1947, 2086
BmrFI	CCNGG	6 cut(s)	239, 752, 1075, 1334, 2298, 2314
BmsI	GCATC	5 cut(s)	742, 1028, 1155, 1268, 2080
BpiI	GAAGAC	1 cut(s)	1653
BplI	GAGNNNNNCTC	4 cut(s)	491, 523, 1187, 1219
BpmI	CTGGAG	2 cut(s)	314, 2129
Bpu10I	CCTNAGC	1 cut(s)	1254
BpuEI	CTTGAG	2 cut(s)	545, 558
BpuMI	CCSGG	2 cut(s)	1075, 2298
BsaAI	YACGTR	1 cut(s)	1085
BsaBI	GATNNNNATC	1 cut(s)	687
BsaI	GGTCTC	1 cut(s)	1828
BsaJI	CCNNGG	5 cut(s)	6, 122, 510, 750, 2173
BsaWI	WCCGGW	1 cut(s)	103
BsaXI	ACNNNNNCTCC	6 cut(s)	799, 829, 1883, 1913, 2102, 2132
Bsc4I	CCNNNNNNNGG	8 cut(s)	12, 212, 427, 724, 1192, 1684, 1883, 2239
Bse1I	ACTGG	4 cut(s)	79, 206, 2112, 2266
Bse21I	CCTNAGG	1 cut(s)	2080
Bse8I	GATNNNNATC	1 cut(s)	687
BseBI	CCWGG	4 cut(s)	239, 752, 1334, 2314
BseDI	CCNNGG	5 cut(s)	6, 122, 510, 750, 2173
BseGI	GGATG	5 cut(s)	112, 289, 733, 1216, 1319
BseJI	GATNNNNATC	1 cut(s)	687
BseLI	CCNNNNNNNGG	8 cut(s)	12, 212, 427, 724, 1192, 1684, 1883, 2239
BseMII	CTCAG	5 cut(s)	630, 1245, 1800, 1815, 1992
BseNI	ACTGG	4 cut(s)	79, 206, 2112, 2266
BseRI	GAGGAG	2 cut(s)	1289, 1697
BseSI	GKGCMC	1 cut(s)	2064
BseXI	GCAGC	7 cut(s)	214, 661, 1234, 1262, 1415, 1792, 1894
BsgI	GTGCAG	2 cut(s)	729, 2150
BshFI	GGCC	3 cut(s)	364, 503, 1173
BshNI	GGYRCC	1 cut(s)	2084
BsiHKAI	GWGCWC	3 cut(s)	1770, 2029, 2064
BsiHKCI	CYCGRG	1 cut(s)	1271
BsiSI	CCGG	3 cut(s)	104, 1074, 2297
BsiWI	CGTACG	1 cut(s)	1085
BslFI	GGGAC	1 cut(s)	2056
BslI	CCNNNNNNNGG	8 cut(s)	12, 212, 427, 724, 1192, 1684, 1883, 2239
BsmAI	GTCTC	5 cut(s)	635, 1235, 1577, 1828, 1997
BsmFI	GGGAC	1 cut(s)	2056
BsnI	GGCC	3 cut(s)	364, 503, 1173
Bso31I	GGTCTC	1 cut(s)	1828
BsoBI	CYCGRG	1 cut(s)	1271
Bsp1286I	GDGCHC	3 cut(s)	1770, 2029, 2064
Bsp19I	CCATGG	1 cut(s)	6
BspACI	CCGC	1 cut(s)	737
BspANI	GGCC	3 cut(s)	364, 503, 1173
BspCNI	CTCAG	5 cut(s)	631, 1246, 1801, 1816, 1993
BspLI	GGNNCC	5 cut(s)	708, 1875, 1893, 1947, 2086
BspMAI	CTGCAG	3 cut(s)	636, 1252, 1647
BspMI	ACCTGC	1 cut(s)	803
BspPI	GGATC	9 cut(s)	677, 1280, 1406, 1559, 1714, 1868, 1881, 1940, 1953
BspT107I	GGYRCC	1 cut(s)	2084
BspTNI	GGTCTC	1 cut(s)	1828
BsrI	ACTGG	4 cut(s)	79, 206, 2112, 2266
BssECI	CCNNGG	5 cut(s)	6, 122, 510, 750, 2173
BssT1I	CCWWGG	3 cut(s)	6, 510, 2173
Bst2UI	CCWGG	4 cut(s)	239, 752, 1334, 2314
Bst4CI	ACNGT	7 cut(s)	43, 719, 826, 1475, 1481, 1799, 2045
Bst6I	CTCTTC	2 cut(s)	1041, 1992
BstAPI	GCANNNNNTGC	1 cut(s)	1547
BstBAI	YACGTR	1 cut(s)	1085
BstC8I	GCNNGC	3 cut(s)	1017, 1092, 2170
BstDEI	CTNAG	7 cut(s)	639, 803, 1254, 1809, 1824, 2001, 2080
BstDSI	CCRYGG	2 cut(s)	6, 122
BstF5I	GGATG	5 cut(s)	112, 289, 733, 1216, 1319
BstH2I	RGCGCY	1 cut(s)	1295
BstHHI	GCGC	2 cut(s)	1146, 1294
BstMAI	GTCTC	5 cut(s)	635, 1235, 1577, 1828, 1997
BstMWI	GCNNNNNNNGC	7 cut(s)	1256, 1520, 1529, 1538, 1547, 1981, 2099
BstNI	CCWGG	4 cut(s)	239, 752, 1334, 2314
BstNSI	RCATGY	1 cut(s)	2129
BstSCI	CCNGG	6 cut(s)	237, 750, 1073, 1332, 2296, 2312
BstSFI	CTRYAG	4 cut(s)	632, 979, 1248, 1643
BstSLI	GKGCMC	1 cut(s)	2064
BstSNI	TACGTA	1 cut(s)	1085
BstV1I	GCAGC	7 cut(s)	214, 661, 1234, 1262, 1415, 1792, 1894
BstV2I	GAAGAC	1 cut(s)	1653
BstX2I	RGATCY	4 cut(s)	472, 682, 1873, 1945
BstXI	CCANNNNNNTGG	3 cut(s)	511, 693, 1931
BstYI	RGATCY	4 cut(s)	472, 682, 1873, 1945
Bsu36I	CCTNAGG	1 cut(s)	2080
BsuRI	GGCC	3 cut(s)	364, 503, 1173
BtgI	CCRYGG	2 cut(s)	6, 122
BtsCI	GGATG	5 cut(s)	112, 289, 733, 1216, 1319
BtsI	GCAGTG	1 cut(s)	624
BtsIMutI	CAGTG	5 cut(s)	624, 948, 1454, 1480, 1804
BveI	ACCTGC	1 cut(s)	803
Cac8I	GCNNGC	3 cut(s)	1017, 1092, 2170
CaiI	CAGNNNCTG	1 cut(s)	2261
CfoI	GCGC	2 cut(s)	1146, 1294
Cfr13I	GGNCC	2 cut(s)	362, 520
CsiI	ACCWGGT	2 cut(s)	1332, 2312
Csp6I	GTAC	6 cut(s)	39, 973, 1086, 1218, 2085, 2197
CviQI	GTAC	6 cut(s)	39, 973, 1086, 1218, 2085, 2197
DdeI	CTNAG	7 cut(s)	639, 803, 1254, 1809, 1824, 2001, 2080
DraI	TTTAAA	1 cut(s)	1903
DrdI	GACNNNNNNGTC	1 cut(s)	2213
DriI	GACNNNNNGTC	2 cut(s)	1189, 1841
DseDI	GACNNNNNNGTC	1 cut(s)	2213
Eam1104I	CTCTTC	2 cut(s)	1041, 1992
Eam1105I	GACNNNNNGTC	2 cut(s)	1189, 1841
EarI	CTCTTC	2 cut(s)	1041, 1992
EciI	GGCGGA	1 cut(s)	726
Ecl136II	GAGCTC	1 cut(s)	2027
Eco105I	TACGTA	1 cut(s)	1085
Eco130I	CCWWGG	3 cut(s)	6, 510, 2173
Eco24I	GRGCYC	1 cut(s)	2029
Eco31I	GGTCTC	1 cut(s)	1828
Eco32I	GATATC	2 cut(s)	258, 1327
Eco47I	GGWCC	1 cut(s)	520
Eco47III	AGCGCT	1 cut(s)	1293
Eco53kI	GAGCTC	1 cut(s)	2027
Eco57I	CTGAAG	4 cut(s)	477, 678, 1430, 1647
Eco81I	CCTNAGG	1 cut(s)	2080
Eco88I	CYCGRG	1 cut(s)	1271
EcoICRI	GAGCTC	1 cut(s)	2027
EcoO109I	RGGNCCY	2 cut(s)	362, 520
EcoRI	GAATTC	1 cut(s)	1030
EcoRII	CCWGG	4 cut(s)	237, 750, 1332, 2312
EcoRV	GATATC	2 cut(s)	258, 1327
EcoT14I	CCWWGG	3 cut(s)	6, 510, 2173
EcoT38I	GRGCYC	1 cut(s)	2029
ErhI	CCWWGG	3 cut(s)	6, 510, 2173
FaqI	GGGAC	1 cut(s)	2056
FauNDI	CATATG	1 cut(s)	265
FbaI	TGATCA	1 cut(s)	333
Fnu4HI	GCNGC	7 cut(s)	203, 650, 1248, 1251, 1404, 1806, 1908
FokI	GGATG	5 cut(s)	119, 296, 720, 1223, 1326
FriOI	GRGCYC	1 cut(s)	2029
Fsp4HI	GCNGC	7 cut(s)	203, 650, 1248, 1251, 1404, 1806, 1908
FspBI	CTAG	4 cut(s)	711, 900, 1748, 2288
GlaI	GCGC	2 cut(s)	1145, 1293
GluI	GCNGC	7 cut(s)	203, 650, 1248, 1251, 1404, 1806, 1908
GsuI	CTGGAG	2 cut(s)	314, 2129
HaeII	RGCGCY	1 cut(s)	1295
HaeIII	GGCC	3 cut(s)	364, 503, 1173
HapII	CCGG	3 cut(s)	104, 1074, 2297
HhaI	GCGC	2 cut(s)	1146, 1294
Hin6I	GCGC	2 cut(s)	1144, 1292
HinP1I	GCGC	2 cut(s)	1144, 1292
HincII	GTYRAC	2 cut(s)	933, 958
HindII	GTYRAC	2 cut(s)	933, 958
HindIII	AAGCTT	2 cut(s)	1265, 1530
HpaII	CCGG	3 cut(s)	104, 1074, 2297
HphI	GGTGA	5 cut(s)	359, 548, 1377, 2033, 2255
Hpy166II	GTNNAC	5 cut(s)	169, 539, 933, 958, 2062
Hpy188III	TCNNGA	5 cut(s)	847, 1271, 1466, 1634, 1691
Hpy8I	GTNNAC	5 cut(s)	169, 539, 933, 958, 2062
Hpy99I	CGWCG	1 cut(s)	2238
HpyAV	CCTTC	6 cut(s)	344, 421, 663, 940, 1414, 1720
HpyCH4III	ACNGT	7 cut(s)	43, 719, 826, 1475, 1481, 1799, 2045
HpyCH4IV	ACGT	2 cut(s)	1084, 1493
HpyF10VI	GCNNNNNNNGC	7 cut(s)	1256, 1520, 1529, 1538, 1547, 1981, 2099
HpyF3I	CTNAG	7 cut(s)	639, 803, 1254, 1809, 1824, 2001, 2080
HpySE526I	ACGT	2 cut(s)	1084, 1493
HspAI	GCGC	2 cut(s)	1144, 1292
KpnI	GGTACC	1 cut(s)	2088
Ksp22I	TGATCA	1 cut(s)	333
LmnI	GCTCC	2 cut(s)	1773, 1891
Lsp1109I	GCAGC	7 cut(s)	214, 661, 1234, 1262, 1415, 1792, 1894
LweI	GCATC	5 cut(s)	742, 1028, 1155, 1268, 2080
MabI	ACCWGGT	2 cut(s)	1332, 2312
MaeI	CTAG	4 cut(s)	711, 900, 1748, 2288
MaeII	ACGT	2 cut(s)	1084, 1493
MaeIII	GTNAC	8 cut(s)	70, 233, 696, 1475, 1854, 2219, 2257, 2308
MfeI	CAATTG	1 cut(s)	1524
MflI	RGATCY	4 cut(s)	472, 682, 1873, 1945
MhlI	GDGCHC	3 cut(s)	1770, 2029, 2064
MlyI	GAGTC	5 cut(s)	887, 928, 1064, 1286, 1667
MmeI	TCCRAC	3 cut(s)	855, 1032, 1173
MroXI	GAANNNNTTC	3 cut(s)	663, 1162, 1533
MseI	TTAA	8 cut(s)	45, 129, 468, 968, 1613, 1902, 2012, 2274
MslI	CAYNNNNRTG	1 cut(s)	1929
MspA1I	CMGCKG	1 cut(s)	1253
MspI	CCGG	3 cut(s)	104, 1074, 2297
MspR9I	CCNGG	6 cut(s)	239, 752, 1075, 1334, 2298, 2314
MunI	CAATTG	1 cut(s)	1524
MvaI	CCWGG	4 cut(s)	239, 752, 1334, 2314
MwoI	GCNNNNNNNGC	7 cut(s)	1256, 1520, 1529, 1538, 1547, 1981, 2099
NciI	CCSGG	2 cut(s)	1075, 2298
NcoI	CCATGG	1 cut(s)	6
NdeI	CATATG	1 cut(s)	265
NlaIV	GGNNCC	5 cut(s)	708, 1875, 1893, 1947, 2086
NmuCI	GTSAC	4 cut(s)	233, 696, 1475, 2308
NspI	RCATGY	1 cut(s)	2129
PaeR7I	CTCGAG	1 cut(s)	1271
PaqCI	CACCTGC	1 cut(s)	803
PdmI	GAANNNNTTC	3 cut(s)	663, 1162, 1533
PfeI	GAWTC	6 cut(s)	23, 242, 622, 1937, 2156, 2246
Pfl23II	CGTACG	1 cut(s)	1085
PflMI	CCANNNNNTGG	3 cut(s)	12, 212, 1883
PkrI	GCNGC	7 cut(s)	204, 651, 1249, 1252, 1405, 1807, 1909
PleI	GAGTC	5 cut(s)	886, 928, 1064, 1285, 1666
PpsI	GAGTC	5 cut(s)	886, 928, 1064, 1285, 1666
Ppu21I	YACGTR	1 cut(s)	1085
PpuMI	RGGWCCY	1 cut(s)	520
PshBI	ATTAAT	1 cut(s)	968
Psp124BI	GAGCTC	1 cut(s)	2029
Psp5II	RGGWCCY	1 cut(s)	520
Psp6I	CCWGG	4 cut(s)	237, 750, 1332, 2312
PspGI	CCWGG	4 cut(s)	237, 750, 1332, 2312
PspLI	CGTACG	1 cut(s)	1085
PspN4I	GGNNCC	5 cut(s)	708, 1875, 1893, 1947, 2086
PspPI	GGNCC	2 cut(s)	362, 520
PspPPI	RGGWCCY	1 cut(s)	520
PstI	CTGCAG	3 cut(s)	636, 1252, 1647
PstNI	CAGNNNCTG	1 cut(s)	2261
PsuI	RGATCY	4 cut(s)	472, 682, 1873, 1945
PvuII	CAGCTG	1 cut(s)	1253
RsaI	GTAC	6 cut(s)	40, 974, 1087, 1219, 2086, 2198
RsaNI	GTAC	6 cut(s)	39, 973, 1086, 1218, 2085, 2197
RseI	CAYNNNNRTG	1 cut(s)	1929
SacI	GAGCTC	1 cut(s)	2029
SaqAI	TTAA	8 cut(s)	45, 129, 468, 968, 1613, 1902, 2012, 2274
SatI	GCNGC	7 cut(s)	203, 650, 1248, 1251, 1404, 1806, 1908
Sau96I	GGNCC	2 cut(s)	362, 520
SchI	GAGTC	5 cut(s)	887, 928, 1064, 1286, 1667
ScrFI	CCNGG	6 cut(s)	239, 752, 1075, 1334, 2298, 2314
SduI	GDGCHC	3 cut(s)	1770, 2029, 2064
SexAI	ACCWGGT	2 cut(s)	1332, 2312
SfaNI	GCATC	5 cut(s)	742, 1028, 1155, 1268, 2080
SfcI	CTRYAG	4 cut(s)	632, 979, 1248, 1643
Sfr274I	CTCGAG	1 cut(s)	1271
SinI	GGWCC	1 cut(s)	520
SlaI	CTCGAG	1 cut(s)	1271
SmiMI	CAYNNNNRTG	1 cut(s)	1929
SmlI	CTYRAG	3 cut(s)	524, 573, 1271
SmoI	CTYRAG	3 cut(s)	524, 573, 1271
SnaBI	TACGTA	1 cut(s)	1085
SsiI	CCGC	1 cut(s)	737
SspI	AATATT	2 cut(s)	93, 1817
SspMI	CTAG	4 cut(s)	711, 900, 1748, 2288
SstI	GAGCTC	1 cut(s)	2029
StyD4I	CCNGG	6 cut(s)	237, 750, 1073, 1332, 2296, 2312
StyI	CCWWGG	3 cut(s)	6, 510, 2173
TaaI	ACNGT	7 cut(s)	43, 719, 826, 1475, 1481, 1799, 2045
TaiI	ACGT	2 cut(s)	1087, 1496
TaqI	TCGA	4 cut(s)	1272, 1570, 1701, 2029
TfiI	GAWTC	6 cut(s)	23, 242, 622, 1937, 2156, 2246
Tru1I	TTAA	8 cut(s)	45, 129, 468, 968, 1613, 1902, 2012, 2274
Tru9I	TTAA	8 cut(s)	45, 129, 468, 968, 1613, 1902, 2012, 2274
TscAI	CASTG	5 cut(s)	624, 948, 1454, 1480, 1804
TseFI	GTSAC	4 cut(s)	233, 696, 1475, 2308
TseI	GCWGC	7 cut(s)	202, 649, 1247, 1250, 1403, 1805, 1907
Tsp45I	GTSAC	4 cut(s)	233, 696, 1475, 2308
TspDTI	ATGAA	8 cut(s)	54, 252, 440, 557, 661, 1407, 2024, 2157
TspGWI	ACGGA	2 cut(s)	2068, 2222
TspRI	CASTG	5 cut(s)	624, 948, 1454, 1480, 1804
Van91I	CCANNNNNTGG	3 cut(s)	12, 212, 1883
VneI	GTGCAC	1 cut(s)	2060
VpaK11BI	GGWCC	1 cut(s)	520
VspI	ATTAAT	1 cut(s)	968
XapI	RAATTY	2 cut(s)	1030, 1773
XceI	RCATGY	1 cut(s)	2129
XcmI	CCANNNNNNNNNTGG	1 cut(s)	511
XhoI	CTCGAG	1 cut(s)	1271
XmnI	GAANNNNTTC	3 cut(s)	663, 1162, 1533
XspI	CTAG	4 cut(s)	711, 900, 1748, 2288

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.