Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0010016

Physical Location & Seq

Genomic Coordinates Forward (+)

95088723 .. 95097484

Gene Structure 8762 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00074160.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1767 bp

ATGGCCAAGCCTGAGCCGAGGGCTCGCACTGTCCTTGAACCGCTGTCATACTTCAATCTATCTGAGCAGTCTCGTGCGCCGGTTAGATCCCTCGCTATCTCCAATGTGTCTGATTCCCAGTGTCTAATATACCTTGGGACTCAGTTTGGAGGGCTATTTTTGTTCTCTGTAGACAATAAGGATCTCAATGCTGCATCTGCGTCCGATCCTTCGAACAACCCTTCGGTCCCACAGAGCATTAAGTTTGTGCGAAACATCTTGGTTGGAAATTCCTCGGTGGACTATATACATGTGTTTGGTGAGATTGGGAAGCTGTTGGTGCTTTTGGATGGCTTTTTGTTTTTGGTTGATTCACTTCTGCTGCAGCCAGTGAAGAAGTTGAGTTTCCTGAGAGGAATTTCTGTCATTACTAGGAGGTTGCGAAGTAGTGAATCAGAGTGCTCGAATTTGTCAGAAGGTGCTGCCAGTTCATCAGAGTATACAAGTACAAGTCAGCGGTTTTTGAAAAAATTGGGAGGTGGGATAAGAGCAAATGGCTTGAAAATGAAAGAATCAATGCAGCACCGGGTGGGCAATCATGTCTTTTCTGTCGTGATTGGTAAAAGATTGATATTGATAGAGTTTGTTTTGAGTAATAGAGTAGGTAAAAGTGACCAAGACATCGATGATGGGTCTTTTGTTATTCTAAAAGAAATTCCATGTATTGATGGGGTTATGGCCATGGTATGGCTCAATGATTCGATAATTGTGAGCACACTTAATGGGTATACTTTGTTTTCTTGTGTTACGGGACAAAGTGGTGTCATATTTTCGTTACCAGATGTTTCTAGTCCACCAAGGCTTAAACTGTTGTGTAAAGAATGGAATGTTCTCTTGTTGGTGGACAATGTAGGCATCATAGCAAATGCCCACGGGCAGCCAGTTGGTGGGAGCCTCGTGTTCCATCGTGACCCAGATTCTATTGGAGAGATATCTTCATATGTGGTTGTTGCAAGGGATGGAAAGATGGAACTGTATCATAAGAAAACAGGTAGGTGTGTTCAGATGGTCACTTTTGGTGGTGAAGGGGTTGGAGGGCCTTGCATTGTTGCGGATGAGGAAGATGGAAGTGGAAAACTTATTGTCGTTGCAACACCCACCAAGGTTATTTGCTATCGGAAGTTACCTTCTGAGGAACAAATTAAAGATCTGTTGAGAAAAAAGAACTTCAAGGAAGCCATCTCCTTAGTGGAGGAGCTTGAATGTGAAGGCGAATTATCAAAAGATATGCTGTCATTTGTTCATGCTCAAGTGGGTTTTCTCTTACTTTTTGACTTGCATTTTGAGGAAGCAGTGAATCACTTTTTGCAGTCTGAGACAATGCAGCCTTCTGAAGTATTTCCATTTATAATGAGGGATCCAAATCGATGGTCACTACTGGTTCCTAGAAACCGTTATTGGGGTTTGCATCCTCCCCCTGCACCTCTGGAAGATGTTGTGGATGATGGATTAATGGCGATCCAAAGAGCAATCTTTCTGAGGAAAGCAGGTGTAGAGACTGTGGTAGATGATGCATTTCTCCTTAATCTGCCAAGCCGAGATGATTTGTTGGAGTCAGCCATCAAGTCAATTACTAGGTATTTGGAGGTTTCCCGTGATAAAGAGTTGACTCCATCAGTGAAGGAGGGAGTTGACACACTATTAATGTATTTGTACAGAGCTTTAAATAATGTCAATGAAATGGAGAAGCTGGTATCTTCTGCAAATTCTTGTGTTGTGGATGACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0007154 GO:0007165 GO:0008150 GO:0009987 GO:0023052 GO:0046332 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0065007

KEGG Pathways

Metabolic & Signaling

ko04138 map04138

Pfam Domains

Protein Families

CNH Clathrin Vps39_1 Vps39_2

Protein Analysis

588

Amino Acids

64.95

Weight (kDa)

5.56

Isoelectric Point (pI)

39.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010016)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G22860
fragaria_vesca	FvH4_3g11790
malus_domestica	MD05G1259300.v1.1 MD10G1238900.v1.1
prunus_persica	Prupe.4G105500_v2.0.a1 Prupe.4G105500_v2.0.a1 Prupe.4G105500_v2.0.a1
pyrus_communis	pycom05g24370 pycom10g19990
rosa_chinensis	RchiOBHm_Chr5g0019211
rosa_laevigata	RLG00000032428
rosa_multiflora	Rmu_co8432961.1_g000001 Rmu_sc0002561.1_g000003
rosa_roxburghii	Rroxscaffold_1G00058780 Rroxscaffold_1G00074160
rosa_rugosa	Rorug05G0048300
rosa_samantha	Rh5AG139700 Rh5BG138700 Rh5CG150100 Rh5DG139300
rosa_wichuraiana	Rw5G012420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1388
AarI	CACCTGC	1 cut(s)	1517
Acc36I	ACCTGC	1 cut(s)	1517
AccB7I	CCANNNNNTGG	2 cut(s)	726, 926
AccI	GTMKAC	3 cut(s)	171, 479, 767
AciI	CCGC	3 cut(s)	41, 496, 1091
AclWI	GGATC	6 cut(s)	81, 189, 200, 1391, 1404, 1492
AcoI	YGGCCR	2 cut(s)	3, 717
AcsI	RAATTY	5 cut(s)	268, 396, 445, 693, 1744
AcuI	CTGAAG	1 cut(s)	1392
AdeI	CACNNNGTG	1 cut(s)	568
AfaI	GTAC	2 cut(s)	487, 1694
AfiI	CCNNNNNNNGG	3 cut(s)	726, 926, 1438
AflIII	ACRYGT	1 cut(s)	289
AgsI	TTSAA	6 cut(s)	38, 55, 505, 541, 1210, 1241
AjuI	GAANNNNNNNTTGG	2 cut(s)	1420, 1452
AluBI	AGCT	4 cut(s)	313, 1237, 1700, 1729
AluI	AGCT	4 cut(s)	313, 1237, 1700, 1729
Alw21I	GWGCWC	2 cut(s)	443, 755
Alw26I	GTCTC	3 cut(s)	75, 1349, 1529
AlwI	GGATC	6 cut(s)	81, 189, 200, 1391, 1404, 1492
AoxI	GGCC	3 cut(s)	3, 717, 1076
ApeKI	GCWGC	7 cut(s)	191, 361, 364, 461, 559, 916, 1363
ApoI	RAATTY	5 cut(s)	268, 396, 445, 693, 1744
ArsI	GACNNNNNNTTYG	4 cut(s)	1304, 1336, 1394, 1426
AseI	ATTAAT	2 cut(s)	1490, 1682
Asp700I	GAANNNNTTC	1 cut(s)	1377
AspLEI	GCGC	1 cut(s)	79
AspS9I	GGNCC	2 cut(s)	226, 1076
AsuC2I	CCSGG	1 cut(s)	566
AsuHPI	GGTGA	2 cut(s)	311, 1073
AsuII	TTCGAA	1 cut(s)	212
AvaII	GGWCC	1 cut(s)	226
BalI	TGGCCA	2 cut(s)	5, 719
BamHI	GGATCC	1 cut(s)	1396
BanII	GRGCYC	1 cut(s)	25
BauI	CACGAG	2 cut(s)	72, 935
Bbv12I	GWGCWC	2 cut(s)	443, 755
BbvI	GCAGC	7 cut(s)	178, 348, 376, 448, 571, 928, 1375
BcnI	CCSGG	1 cut(s)	566
BcoDI	GTCTC	3 cut(s)	75, 1349, 1529
BfaI	CTAG	4 cut(s)	411, 828, 1425, 1614
BfmI	CTRYAG	2 cut(s)	168, 362
BfuAI	ACCTGC	1 cut(s)	1517
BglII	AGATCT	1 cut(s)	1186
BisI	GCNGC	7 cut(s)	192, 362, 365, 462, 560, 917, 1364
BlsI	GCNGC	7 cut(s)	193, 363, 366, 463, 561, 918, 1365
Bme1390I	CCNGG	1 cut(s)	566
Bme18I	GGWCC	1 cut(s)	226
BmgT120I	GGNCC	2 cut(s)	226, 1076
BmiI	GGNNCC	4 cut(s)	228, 932, 1398, 1422
BmrFI	CCNGG	1 cut(s)	566
BmrI	ACTGGG	1 cut(s)	112
BmsI	GCATC	4 cut(s)	203, 903, 1456, 1540
BmuI	ACTGGG	1 cut(s)	112
Bpu10I	CCTNAGC	1 cut(s)	12
Bpu14I	TTCGAA	1 cut(s)	212
BpuEI	CTTGAG	1 cut(s)	1272
BpuMI	CCSGG	1 cut(s)	566
Bsa29I	ATCGAT	2 cut(s)	663, 1405
BsaBI	GATNNNNATC	1 cut(s)	1401
BsaJI	CCNNGG	7 cut(s)	17, 133, 273, 720, 836, 910, 1140
Bsc4I	CCNNNNNNNGG	3 cut(s)	726, 926, 1438
Bse118I	RCCGGY	1 cut(s)	79
Bse1I	ACTGG	5 cut(s)	118, 368, 465, 920, 1422
Bse8I	GATNNNNATC	1 cut(s)	1401
BseCI	ATCGAT	2 cut(s)	663, 1405
BseDI	CCNNGG	7 cut(s)	17, 133, 273, 720, 836, 910, 1140
BseGI	GGATG	6 cut(s)	334, 1003, 1099, 1447, 1486, 1765
BseJI	GATNNNNATC	1 cut(s)	1401
BseLI	CCNNNNNNNGG	3 cut(s)	726, 926, 1438
BseMII	CTCAG	6 cut(s)	54, 155, 380, 1161, 1344, 1508
BseNI	ACTGG	5 cut(s)	118, 368, 465, 920, 1422
BseRI	GAGGAG	1 cut(s)	1247
BseXI	GCAGC	7 cut(s)	178, 348, 376, 448, 571, 928, 1375
BsgI	GTGCAG	1 cut(s)	1443
BshFI	GGCC	3 cut(s)	5, 719, 1078
BshVI	ATCGAT	2 cut(s)	663, 1405
BsiHKAI	GWGCWC	2 cut(s)	443, 755
BsiSI	CCGG	2 cut(s)	80, 565
BslFI	GGGAC	3 cut(s)	151, 212, 804
BslI	CCNNNNNNNGG	3 cut(s)	726, 926, 1438
BsmAI	GTCTC	3 cut(s)	75, 1349, 1529
BsmFI	GGGAC	3 cut(s)	151, 212, 804
BsnI	GGCC	3 cut(s)	5, 719, 1078
Bsp119I	TTCGAA	1 cut(s)	212
Bsp1286I	GDGCHC	3 cut(s)	25, 443, 755
Bsp1407I	TGTACA	1 cut(s)	1692
Bsp143I	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
Bsp19I	CCATGG	1 cut(s)	720
BspACI	CCGC	3 cut(s)	41, 496, 1091
BspANI	GGCC	3 cut(s)	5, 719, 1078
BspCNI	CTCAG	7 cut(s)	4, 55, 154, 381, 1162, 1345, 1509
BspDI	ATCGAT	2 cut(s)	663, 1405
BspLI	GGNNCC	4 cut(s)	228, 932, 1398, 1422
BspMAI	CTGCAG	1 cut(s)	366
BspMI	ACCTGC	1 cut(s)	1517
BspPI	GGATC	6 cut(s)	81, 189, 200, 1391, 1404, 1492
BspT104I	TTCGAA	1 cut(s)	212
BsrFI	RCCGGY	1 cut(s)	79
BsrGI	TGTACA	1 cut(s)	1692
BsrI	ACTGG	5 cut(s)	118, 368, 465, 920, 1422
BssAI	RCCGGY	1 cut(s)	79
BssECI	CCNNGG	7 cut(s)	17, 133, 273, 720, 836, 910, 1140
BssMI	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
BssNAI	GTATAC	2 cut(s)	480, 768
BssSI	CACGAG	2 cut(s)	72, 935
BssT1I	CCWWGG	4 cut(s)	133, 720, 836, 1140
Bst1107I	GTATAC	2 cut(s)	480, 768
Bst2BI	CACGAG	2 cut(s)	72, 935
Bst4CI	ACNGT	5 cut(s)	31, 849, 1014, 1433, 1540
BstAUI	TGTACA	1 cut(s)	1692
BstBI	TTCGAA	1 cut(s)	212
BstC8I	GCNNGC	1 cut(s)	25
BstDEI	CTNAG	8 cut(s)	12, 63, 141, 389, 1170, 1225, 1353, 1517
BstDSI	CCRYGG	2 cut(s)	720, 910
BstF5I	GGATG	6 cut(s)	334, 1003, 1099, 1447, 1486, 1765
BstHHI	GCGC	1 cut(s)	79
BstKTI	GATC	6 cut(s)	89, 184, 208, 1189, 1399, 1500
BstMAI	GTCTC	3 cut(s)	75, 1349, 1529
BstMBI	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
BstMWI	GCNNNNNNNGC	2 cut(s)	197, 319
BstNSI	RCATGY	1 cut(s)	293
BstSCI	CCNGG	1 cut(s)	564
BstSFI	CTRYAG	2 cut(s)	168, 362
BstV1I	GCAGC	7 cut(s)	178, 348, 376, 448, 571, 928, 1375
BstX2I	RGATCY	4 cut(s)	86, 181, 1186, 1396
BstXI	CCANNNNNNTGG	1 cut(s)	1407
BstYI	RGATCY	4 cut(s)	86, 181, 1186, 1396
BstZ17I	GTATAC	2 cut(s)	480, 768
Bsu15I	ATCGAT	2 cut(s)	663, 1405
BsuRI	GGCC	3 cut(s)	5, 719, 1078
BsuTUI	ATCGAT	2 cut(s)	663, 1405
BtgI	CCRYGG	2 cut(s)	720, 910
BtsCI	GGATG	6 cut(s)	334, 1003, 1099, 1447, 1486, 1765
BtsI	GCAGTG	1 cut(s)	1338
BtsIMutI	CAGTG	5 cut(s)	27, 125, 375, 1338, 1662
BveI	ACCTGC	1 cut(s)	1517
Cac8I	GCNNGC	1 cut(s)	25
CfoI	GCGC	1 cut(s)	79
Cfr10I	RCCGGY	1 cut(s)	79
Cfr13I	GGNCC	2 cut(s)	226, 1076
ClaI	ATCGAT	2 cut(s)	663, 1405
CseI	GACGC	1 cut(s)	189
Csp6I	GTAC	2 cut(s)	486, 1693
CviAII	CATG	5 cut(s)	290, 578, 699, 721, 1283
CviQI	GTAC	2 cut(s)	486, 1693
DdeI	CTNAG	8 cut(s)	12, 63, 141, 389, 1170, 1225, 1353, 1517
DpnI	GATC	6 cut(s)	88, 183, 207, 1188, 1398, 1499
DpnII	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
DraI	TTTAAA	1 cut(s)	1704
DraIII	CACNNNGTG	1 cut(s)	568
EaeI	YGGCCR	2 cut(s)	3, 717
Eco130I	CCWWGG	4 cut(s)	133, 720, 836, 1140
Eco24I	GRGCYC	1 cut(s)	25
Eco32I	GATATC	1 cut(s)	972
Eco47I	GGWCC	1 cut(s)	226
Eco57I	CTGAAG	1 cut(s)	1392
EcoO109I	RGGNCCY	1 cut(s)	1076
EcoRV	GATATC	1 cut(s)	972
EcoT14I	CCWWGG	4 cut(s)	133, 720, 836, 1140
EcoT22I	ATGCAT	1 cut(s)	1555
EcoT38I	GRGCYC	1 cut(s)	25
ErhI	CCWWGG	4 cut(s)	133, 720, 836, 1140
FaeI	CATG	5 cut(s)	293, 581, 702, 724, 1286
FaqI	GGGAC	3 cut(s)	151, 212, 804
FatI	CATG	5 cut(s)	289, 577, 698, 720, 1282
FauNDI	CATATG	1 cut(s)	979
FblI	GTMKAC	3 cut(s)	171, 479, 767
Fnu4HI	GCNGC	7 cut(s)	192, 362, 365, 462, 560, 917, 1364
FokI	GGATG	5 cut(s)	341, 1010, 1106, 1434, 1493
FriOI	GRGCYC	1 cut(s)	25
Fsp4HI	GCNGC	7 cut(s)	192, 362, 365, 462, 560, 917, 1364
FspBI	CTAG	4 cut(s)	411, 828, 1425, 1614
GlaI	GCGC	1 cut(s)	78
GluI	GCNGC	7 cut(s)	192, 362, 365, 462, 560, 917, 1364
HaeIII	GGCC	3 cut(s)	5, 719, 1078
HapII	CCGG	2 cut(s)	80, 565
HgaI	GACGC	1 cut(s)	189
HhaI	GCGC	1 cut(s)	79
Hin1II	CATG	5 cut(s)	293, 581, 702, 724, 1286
Hin6I	GCGC	1 cut(s)	77
HinP1I	GCGC	1 cut(s)	77
HincII	GTYRAC	2 cut(s)	1647, 1672
HindII	GTYRAC	2 cut(s)	1647, 1672
HpaII	CCGG	2 cut(s)	80, 565
HphI	GGTGA	2 cut(s)	311, 1073
Hpy166II	GTNNAC	8 cut(s)	172, 280, 480, 768, 833, 883, 1647, 1672
Hpy188III	TCNNGA	4 cut(s)	388, 592, 947, 1466
Hpy8I	GTNNAC	8 cut(s)	172, 280, 480, 768, 833, 883, 1647, 1672
HpyAV	CCTTC	8 cut(s)	219, 231, 449, 1058, 1176, 1241, 1377, 1654
HpyCH4III	ACNGT	5 cut(s)	31, 849, 1014, 1433, 1540
HpyF10VI	GCNNNNNNNGC	2 cut(s)	197, 319
HpyF3I	CTNAG	8 cut(s)	12, 63, 141, 389, 1170, 1225, 1353, 1517
Hsp92II	CATG	5 cut(s)	293, 581, 702, 724, 1286
HspAI	GCGC	1 cut(s)	77
Kzo9I	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
LmnI	GCTCC	2 cut(s)	930, 1234
Lsp1109I	GCAGC	7 cut(s)	178, 348, 376, 448, 571, 928, 1375
LweI	GCATC	4 cut(s)	203, 903, 1456, 1540
MaeI	CTAG	4 cut(s)	411, 828, 1425, 1614
MaeIII	GTNAC	7 cut(s)	650, 784, 813, 947, 1048, 1161, 1410
MalI	GATC	6 cut(s)	88, 183, 207, 1188, 1398, 1499
MboI	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
MboII	GAAGA	5 cut(s)	385, 966, 1112, 1481, 1728
MflI	RGATCY	4 cut(s)	86, 181, 1186, 1396
MhlI	GDGCHC	3 cut(s)	25, 443, 755
MlsI	TGGCCA	2 cut(s)	5, 719
MluNI	TGGCCA	2 cut(s)	5, 719
MlyI	GAGTC	3 cut(s)	133, 1601, 1642
MmeI	TCCRAC	3 cut(s)	244, 1051, 1569
Mox20I	TGGCCA	2 cut(s)	5, 719
Mph1103I	ATGCAT	1 cut(s)	1555
MroXI	GAANNNNTTC	1 cut(s)	1377
MscI	TGGCCA	2 cut(s)	5, 719
MseI	TTAA	8 cut(s)	240, 759, 843, 1182, 1490, 1563, 1682, 1703
Msp20I	TGGCCA	2 cut(s)	5, 719
MspA1I	CMGCKG	2 cut(s)	43, 496
MspI	CCGG	2 cut(s)	80, 565
MspR9I	CCNGG	1 cut(s)	566
MwoI	GCNNNNNNNGC	2 cut(s)	197, 319
NciI	CCSGG	1 cut(s)	566
NcoI	CCATGG	1 cut(s)	720
NdeI	CATATG	1 cut(s)	979
NdeII	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
NlaIII	CATG	5 cut(s)	293, 581, 702, 724, 1286
NlaIV	GGNNCC	4 cut(s)	228, 932, 1398, 1422
NmeAIII	GCCGAG	2 cut(s)	42, 1601
NmuCI	GTSAC	4 cut(s)	650, 947, 1048, 1410
NsiI	ATGCAT	1 cut(s)	1555
NspI	RCATGY	1 cut(s)	293
NspV	TTCGAA	1 cut(s)	212
PaqCI	CACCTGC	1 cut(s)	1517
PciI	ACATGT	1 cut(s)	289
PdmI	GAANNNNTTC	1 cut(s)	1377
PfeI	GAWTC	7 cut(s)	113, 350, 431, 551, 737, 956, 1336
PflMI	CCANNNNNTGG	2 cut(s)	726, 926
PkrI	GCNGC	7 cut(s)	193, 363, 366, 463, 561, 918, 1365
PleI	GAGTC	3 cut(s)	133, 1600, 1642
PpsI	GAGTC	3 cut(s)	133, 1600, 1642
PscI	ACATGT	1 cut(s)	289
PshBI	ATTAAT	2 cut(s)	1490, 1682
PsiI	TTATAA	1 cut(s)	1388
PspN4I	GGNNCC	4 cut(s)	228, 932, 1398, 1422
PspPI	GGNCC	2 cut(s)	226, 1076
PstI	CTGCAG	1 cut(s)	366
PsuI	RGATCY	4 cut(s)	86, 181, 1186, 1396
RsaI	GTAC	2 cut(s)	487, 1694
RsaNI	GTAC	2 cut(s)	486, 1693
SaqAI	TTAA	8 cut(s)	240, 759, 843, 1182, 1490, 1563, 1682, 1703
SatI	GCNGC	7 cut(s)	192, 362, 365, 462, 560, 917, 1364
Sau3AI	GATC	6 cut(s)	86, 181, 205, 1186, 1396, 1497
Sau96I	GGNCC	2 cut(s)	226, 1076
SchI	GAGTC	3 cut(s)	133, 1601, 1642
ScrFI	CCNGG	1 cut(s)	566
SduI	GDGCHC	3 cut(s)	25, 443, 755
SfaNI	GCATC	4 cut(s)	203, 903, 1456, 1540
SfcI	CTRYAG	2 cut(s)	168, 362
SfuI	TTCGAA	1 cut(s)	212
SinI	GGWCC	1 cut(s)	226
SmlI	CTYRAG	1 cut(s)	1287
SmoI	CTYRAG	1 cut(s)	1287
SsiI	CCGC	3 cut(s)	41, 496, 1091
SspMI	CTAG	4 cut(s)	411, 828, 1425, 1614
StyD4I	CCNGG	1 cut(s)	564
StyI	CCWWGG	4 cut(s)	133, 720, 836, 1140
TaaI	ACNGT	5 cut(s)	31, 849, 1014, 1433, 1540
TaqI	TCGA	5 cut(s)	212, 443, 663, 740, 1405
TaqII	GACCGA	1 cut(s)	214
TatI	WGTACW	2 cut(s)	485, 1692
TfiI	GAWTC	7 cut(s)	113, 350, 431, 551, 737, 956, 1336
Tru1I	TTAA	8 cut(s)	240, 759, 843, 1182, 1490, 1563, 1682, 1703
Tru9I	TTAA	8 cut(s)	240, 759, 843, 1182, 1490, 1563, 1682, 1703
TscAI	CASTG	5 cut(s)	34, 125, 375, 1338, 1662
TseFI	GTSAC	4 cut(s)	650, 947, 1048, 1410
TseI	GCWGC	7 cut(s)	191, 361, 364, 461, 559, 916, 1363
Tsp45I	GTSAC	4 cut(s)	650, 947, 1048, 1410
TspDTI	ATGAA	5 cut(s)	459, 560, 966, 1271, 1731
TspRI	CASTG	5 cut(s)	34, 125, 375, 1338, 1662
Van91I	CCANNNNNTGG	2 cut(s)	726, 926
VpaK11BI	GGWCC	1 cut(s)	226
VspI	ATTAAT	2 cut(s)	1490, 1682
XapI	RAATTY	5 cut(s)	268, 396, 445, 693, 1744
XceI	RCATGY	1 cut(s)	293
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1225
XmiI	GTMKAC	3 cut(s)	171, 479, 767
XmnI	GAANNNNTTC	1 cut(s)	1377
XspI	CTAG	4 cut(s)	411, 828, 1425, 1614
Zsp2I	ATGCAT	1 cut(s)	1555

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.