Rmu_sc0002561.1_g000003

Transforming growth factor-beta receptor-associated protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002561.1
Physical Location & Seq
Forward (+)
9203 .. 16832
7630 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002561.1_g000003.1.cds

Sequence Viewer

Length: 3216 bp
atggccaagcctgagccgagggctcgcactgtccttgaaccgctgtcatacttcaatctatctgagcagtctcgtgcgccggttagatccctcgctatctccaatgtgtctgattcgcagtgtctaatataccttgggactcagtttggagggctatttttgttctctgtagacaataaggatctcaatgctgcatctgcgtccgatccttcgaacaacccttcggtcccacagagcattaagtttgtgcgaaacgtcttggttggaaattcctcggtggactatatacatgtgtttggtgagattgggaagctgttggtgcttttggatggctttttgtttttggttgattcacttctgctgcagccagtgaagaagttgagtttcctgagaggaatttctgtcattactaggagattgcgaagtagtgaatcagagtgctcaaatttgtcagaaggtgctgccagttcatcagagtatacgagcacaagtcagcggtttttgaaaaaattgggaggtgggataagagcaaatggcttgaaaatgaaagaatcaacacagcaccgggtgggcaatcatgtcttttctgtcgtgattgggaaaagattgatattgatagagtttgttttgagtaatagagtaggtaaaagtgaccaagacatcgatgatgggtcttttgttattctaaaagaaattccatgtatcgatggggttatggccatggtatggctcaatgattcgataattgtgagcacacttaatgggtatactttgttttcatgtgttacgggacaaagtggtgtcatattttcgttaccagatgtttctagtccaccacggcttaaactgttgtgtaaagaatggaatgttctcttgttggtggacaatgtaggcatcatagcaaatgcccacgggcagccggttggtgggagccttgtgttccatcgtgacccagattctattggagagatatcttcatatgtggttgttgcaagggatggaaagatggaactgtatcataagaaaacaggtcggtgtgttcagatggtcacttttggtggtgaaggggttggagggccttgcattgttgcggatgaggaagatggaagtggaaaacttattgtcgttgcaacacccactaaggttatttgctatcggaagttaccttctgaggaacaaattaaagatctgttaagaaaaaagaacttcaaggaagccatctccttagtggaggagcttgaatgtgaaggcgaattatcaaaagatatgctgtcatttgttcatgctcaagtgggttttctcttactttttgacttgcattttgaggaagcagtgaatcactttttgcagtctgagacaatgcagccttctgaagtatttccatttataatgagggatccaaatcgatggtcactactggttcctagaaaccgttattggggtttgcatcctccccctgcacctctggaagatgttgtggatgacggattaatggcgatccaaagagcaatctttctgaggaaagcaggtgtagagactgtggtagatgatgcatttctccttaatctgccaagccgagatgatctgttggagtcagccatcaagtcaattactaggtatttggaggtttcccgtgataaagaattgactccatcagtgaaggagggagttgacacactattaatgtatttgtacagagctttaaataatgtcaatgaaatggagaagctggtatcttctgcaaattcttgtgttgtggaggagttggaaagtctattagatgactctgggcatttgcgaacacttgcctttctatattcaagtaaaggaatgagttcaaaggctcttgccatctggcgcattttggcaagaaattattcatctggcctttggaaagatccttcttcagagagtagctcagattgtggtggtacaaatattatctccggtaaagagactgctgcagctgaggcatcaaagattcttgaggagtcatctgattcacagctggttctacaacatcttggatgggttgcagatatcaaccaggtctttgcggttcagattttaacatcagagaaaagagacaatcagctcccaccagaggaagtaattgcagctattgatccaaagaaagttgaaatacttcaaaggtaccttcagtggttgattgaagaccaagattctaacgacagtcagttccacacaatatatgctctctcacttgctaagtcagcccttgaatcattcgaagcagaagttgcctccaaaatcctcgatcctgtaaggagagaggaaacaagcatttctgaatatagaaccagtgcaatatttcaaagtcctgtgcgggaaagactccagatttttttactgtcttcagacttgtatgacccagaggaagttcttgacttgattgaaggatcagaattatggtcagagaaggctatactatacaaaaaactagggcaagaggcactggtactccaaattttggccttgaagctagaagacagtgaagctgctgagcaatattgtgctgagattggcagaccagatgtctatatgcagttacttgatatgtatttggatccacaagatggtaaggagcctatgtttaaagctgctgttcgcctactccacaatcatggggaatcattggatcctttgcaagtattagagagattgtccccagatatgccccttcaacttgcttcagagactatattaagaatgttgagagctagacttcatcatcatcgtcaaggacgtattgtgcataatctggcccgtgccttagatactgatgcaagtttagcaatattagaggaaagatcaaggcatgtgcagatcaatgatgaaagcctttgcgattcttgtcatgcacgcctgggaactaaactttttgcaatgtaccctgatgacaccatagtttgttataagtgttttcgtcgccagggtgagtctacttcagtcactggtcgcaactttaaacaagatgtcctagtaaaacctggttggctcgtgacccgagaatcagaactttcaggtaatggattgctgaagcgctccggaggactagcgtctgcatttttctgttggatacaagtgaccgagtcccaactttctagtgtgttgttccataggggaagacaatcttcacgcagagtatgtgttccttgttcagttgttttatcctcagcaatcccagttttgtaa

Protein Analysis

1071

Amino Acids

119.11

Weight (kDa)

5.43

Isoelectric Point (pI)

50.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1388, 2937
AarI CACCTGC 1 cut(s) 1517
Acc36I ACCTGC 1 cut(s) 1517
Acc65I GGTACC 1 cut(s) 2154
AccB1I GGYRCC 1 cut(s) 2154
AccB7I CCANNNNNTGG 3 cut(s) 726, 2491, 2597
AccI GTMKAC 4 cut(s) 171, 479, 767, 2963
AccIII TCCGGA 1 cut(s) 3068
AciI CCGC 5 cut(s) 41, 496, 1091, 2057, 2347
AcoI YGGCCR 2 cut(s) 3, 717
AcsI RAATTY 6 cut(s) 268, 396, 445, 693, 1744, 2487
AcuI CTGAAG 7 cut(s) 1392, 1890, 2144, 2361, 2697, 2952, 3080
AdeI CACNNNGTG 1 cut(s) 568
AfaI GTAC 5 cut(s) 1694, 1933, 2156, 2481, 2912
AfeI AGCGCT 1 cut(s) 3065
AfiI CCNNNNNNNGG 6 cut(s) 726, 926, 1438, 2104, 2491, 2597
AflIII ACRYGT 1 cut(s) 289
AhdI GACNNNNNGTC 1 cut(s) 2555
AjnI CCWGG 4 cut(s) 2046, 2886, 2952, 3010
AjuI GAANNNNNNNTTGG 2 cut(s) 1420, 1452
Alw21I GWGCWC 3 cut(s) 443, 488, 755
Alw26I GTCTC 6 cut(s) 75, 1349, 1529, 1949, 2079, 2711
AlwNI CAGNNNCTG 1 cut(s) 2975
Ama87I CYCGRG 1 cut(s) 3027
Aor13HI TCCGGA 1 cut(s) 3068
Aor51HI AGCGCT 1 cut(s) 3065
AoxI GGCC 6 cut(s) 3, 717, 1076, 1885, 2493, 2784
ApoI RAATTY 6 cut(s) 268, 396, 445, 693, 1744, 2487
ArsI GACNNNNNNTTYG 4 cut(s) 1304, 1336, 1394, 1426
AseI ATTAAT 2 cut(s) 1490, 1682
Asp700I GAANNNNTTC 4 cut(s) 1377, 1834, 1876, 2145
Asp718I GGTACC 1 cut(s) 2154
AspLEI GCGC 3 cut(s) 79, 1860, 3066
AspS9I GGNCC 3 cut(s) 226, 1076, 2785
AsuC2I CCSGG 1 cut(s) 566
AsuHPI GGTGA 3 cut(s) 311, 1073, 2969
AsuII TTCGAA 2 cut(s) 212, 2250
AvaI CYCGRG 1 cut(s) 3027
AvaII GGWCC 1 cut(s) 226
BalI TGGCCA 2 cut(s) 5, 719
BamHI GGATCC 3 cut(s) 1396, 2587, 2659
BanI GGYRCC 1 cut(s) 2154
BanII GRGCYC 1 cut(s) 25
BauI CACGAG 2 cut(s) 72, 3020
BbsI GAAGAC 4 cut(s) 2181, 2367, 2514, 3154
Bbv12I GWGCWC 3 cut(s) 443, 488, 755
BbvCI CCTCAGC 2 cut(s) 1968, 3196
BceAI ACGGC 1 cut(s) 854
BciT130I CCWGG 4 cut(s) 2048, 2888, 2954, 3012
BciVI GTATCC 1 cut(s) 3093
BcnI CCSGG 1 cut(s) 566
BcoDI GTCTC 6 cut(s) 75, 1349, 1529, 1949, 2079, 2711
BfmI CTRYAG 3 cut(s) 168, 362, 1962
BfoI RGCGCY 1 cut(s) 3067
BfuAI ACCTGC 1 cut(s) 1517
BfuI GTATCC 1 cut(s) 3093
BglII AGATCT 1 cut(s) 1186
BlpI GCTNAGC 1 cut(s) 2523
Bme1390I CCNGG 5 cut(s) 566, 2048, 2888, 2954, 3012
Bme18I GGWCC 1 cut(s) 226
BmeRI GACNNNNNGTC 1 cut(s) 2555
BmeT110I CYCGRG 1 cut(s) 3027
BmgT120I GGNCC 3 cut(s) 226, 1076, 2785
BmiI GGNNCC 8 cut(s) 228, 932, 1398, 1422, 2156, 2589, 2607, 2661
BmrFI CCNGG 5 cut(s) 566, 2048, 2888, 2954, 3012
BmrI ACTGGG 1 cut(s) 3200
BmsI GCATC 6 cut(s) 203, 903, 1456, 1540, 1982, 2794
BmuI ACTGGG 1 cut(s) 3200
BoxI GACNNNNGTC 1 cut(s) 3079
BpiI GAAGAC 4 cut(s) 2181, 2367, 2514, 3154
BplI GAGNNNNNCTC 2 cut(s) 1901, 1933
BpmI CTGGAG 1 cut(s) 2342
Bpu10I CCTNAGC 3 cut(s) 12, 1968, 3196
Bpu1102I GCTNAGC 1 cut(s) 2523
Bpu14I TTCGAA 2 cut(s) 212, 2250
BpuEI CTTGAG 2 cut(s) 1272, 2006
BpuMI CCSGG 1 cut(s) 566
Bsa29I ATCGAT 3 cut(s) 663, 705, 1405
BsaBI GATNNNNATC 1 cut(s) 1401
BsaJI CCNNGG 8 cut(s) 17, 133, 273, 720, 836, 910, 2887, 2953
BsaWI WCCGGW 2 cut(s) 1946, 3068
BsaXI ACNNNNNCTCC 4 cut(s) 2466, 2496, 2597, 2627
Bsc4I CCNNNNNNNGG 6 cut(s) 726, 926, 1438, 2104, 2491, 2597
Bse118I RCCGGY 2 cut(s) 79, 919
Bse1I ACTGG 7 cut(s) 368, 465, 1422, 2322, 2481, 2980, 3206
Bse3DI GCAATG 1 cut(s) 2913
Bse8I GATNNNNATC 1 cut(s) 1401
BseAI TCCGGA 1 cut(s) 3068
BseBI CCWGG 4 cut(s) 2048, 2888, 2954, 3012
BseCI ATCGAT 3 cut(s) 663, 705, 1405
BseDI CCNNGG 8 cut(s) 17, 133, 273, 720, 836, 910, 2887, 2953
BseGI GGATG 6 cut(s) 334, 1003, 1099, 1447, 1486, 2033
BseJI GATNNNNATC 1 cut(s) 1401
BseLI CCNNNNNNNGG 6 cut(s) 726, 926, 1438, 2104, 2491, 2597
BseMI GCAATG 1 cut(s) 2913
BseNI ACTGG 7 cut(s) 368, 465, 1422, 2322, 2481, 2980, 3206
BseRI GAGGAG 3 cut(s) 1247, 1775, 2003
BsgI GTGCAG 2 cut(s) 1443, 2864
BshFI GGCC 6 cut(s) 5, 719, 1078, 1887, 2495, 2786
BshNI GGYRCC 1 cut(s) 2154
BshVI ATCGAT 3 cut(s) 663, 705, 1405
BsiHKAI GWGCWC 3 cut(s) 443, 488, 755
BsiHKCI CYCGRG 1 cut(s) 3027
BsiSI CCGG 5 cut(s) 80, 565, 920, 1947, 3069
BslFI GGGAC 5 cut(s) 151, 212, 804, 2671, 3100
BslI CCNNNNNNNGG 6 cut(s) 726, 926, 1438, 2104, 2491, 2597
BsmAI GTCTC 6 cut(s) 75, 1349, 1529, 1949, 2079, 2711
BsmFI GGGAC 5 cut(s) 151, 212, 804, 2671, 3100
BsnI GGCC 6 cut(s) 5, 719, 1078, 1887, 2495, 2786
BsoBI CYCGRG 1 cut(s) 3027
Bsp119I TTCGAA 2 cut(s) 212, 2250
Bsp1286I GDGCHC 4 cut(s) 25, 443, 488, 755
Bsp13I TCCGGA 1 cut(s) 3068
Bsp1407I TGTACA 1 cut(s) 1692
Bsp1720I GCTNAGC 1 cut(s) 2523
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 5 cut(s) 41, 496, 1091, 2057, 2347
BspANI GGCC 6 cut(s) 5, 719, 1078, 1887, 2495, 2786
BspDI ATCGAT 3 cut(s) 663, 705, 1405
BspEI TCCGGA 1 cut(s) 3068
BspLI GGNNCC 8 cut(s) 228, 932, 1398, 1422, 2156, 2589, 2607, 2661
BspMAI CTGCAG 2 cut(s) 366, 1966
BspMI ACCTGC 1 cut(s) 1517
BspT104I TTCGAA 2 cut(s) 212, 2250
BspT107I GGYRCC 1 cut(s) 2154
BsrDI GCAATG 1 cut(s) 2913
BsrFI RCCGGY 2 cut(s) 79, 919
BsrGI TGTACA 1 cut(s) 1692
BsrI ACTGG 7 cut(s) 368, 465, 1422, 2322, 2481, 2980, 3206
BssAI RCCGGY 2 cut(s) 79, 919
BssECI CCNNGG 8 cut(s) 17, 133, 273, 720, 836, 910, 2887, 2953
BssNAI GTATAC 2 cut(s) 480, 768
BssSI CACGAG 2 cut(s) 72, 3020
BssT1I CCWWGG 2 cut(s) 133, 720
Bst1107I GTATAC 2 cut(s) 480, 768
Bst2BI CACGAG 2 cut(s) 72, 3020
Bst2UI CCWGG 4 cut(s) 2048, 2888, 2954, 3012
Bst4CI ACNGT 8 cut(s) 31, 849, 1014, 1433, 1540, 2195, 2373, 2513
BstAPI GCANNNNNTGC 1 cut(s) 2261
BstAUI TGTACA 1 cut(s) 1692
BstBI TTCGAA 2 cut(s) 212, 2250
BstC8I GCNNGC 2 cut(s) 25, 2884
BstDSI CCRYGG 3 cut(s) 720, 836, 910
BstF5I GGATG 6 cut(s) 334, 1003, 1099, 1447, 1486, 2033
BstH2I RGCGCY 1 cut(s) 3067
BstHHI GCGC 3 cut(s) 79, 1860, 3066
BstMAI GTCTC 6 cut(s) 75, 1349, 1529, 1949, 2079, 2711
BstMWI GCNNNNNNNGC 6 cut(s) 197, 319, 1970, 2234, 2261, 2813
BstNI CCWGG 4 cut(s) 2048, 2888, 2954, 3012
BstNSI RCATGY 2 cut(s) 293, 2843
BstPAI GACNNNNGTC 1 cut(s) 3079
BstSCI CCNGG 5 cut(s) 564, 2046, 2886, 2952, 3010
BstSFI CTRYAG 3 cut(s) 168, 362, 1962
BstV2I GAAGAC 4 cut(s) 2181, 2367, 2514, 3154
BstX2I RGATCY 7 cut(s) 86, 181, 1186, 1396, 1897, 2587, 2659
BstXI CCANNNNNNTGG 2 cut(s) 1407, 2645
BstYI RGATCY 7 cut(s) 86, 181, 1186, 1396, 1897, 2587, 2659
BstZ17I GTATAC 2 cut(s) 480, 768
Bsu15I ATCGAT 3 cut(s) 663, 705, 1405
BsuI GTATCC 1 cut(s) 3093
BsuRI GGCC 6 cut(s) 5, 719, 1078, 1887, 2495, 2786
BsuTUI ATCGAT 3 cut(s) 663, 705, 1405
BtgI CCRYGG 3 cut(s) 720, 836, 910
BtsCI GGATG 6 cut(s) 334, 1003, 1099, 1447, 1486, 2033
BtsI GCAGTG 2 cut(s) 125, 1338
BveI ACCTGC 1 cut(s) 1517
Cac8I GCNNGC 2 cut(s) 25, 2884
CaiI CAGNNNCTG 1 cut(s) 2975
CfoI GCGC 3 cut(s) 79, 1860, 3066
Cfr10I RCCGGY 2 cut(s) 79, 919
Cfr13I GGNCC 3 cut(s) 226, 1076, 2785
ClaI ATCGAT 3 cut(s) 663, 705, 1405
CseI GACGC 2 cut(s) 189, 3069
CsiI ACCWGGT 2 cut(s) 2046, 3010
Csp6I GTAC 5 cut(s) 1693, 1932, 2155, 2480, 2911
CviAII CATG 9 cut(s) 290, 578, 699, 721, 780, 1283, 2645, 2840, 2879
CviQI GTAC 5 cut(s) 1693, 1932, 2155, 2480, 2911
DraI TTTAAA 3 cut(s) 1704, 2617, 2989
DraIII CACNNNGTG 1 cut(s) 568
DriI GACNNNNNGTC 1 cut(s) 2555
EaeI YGGCCR 2 cut(s) 3, 717
Eam1105I GACNNNNNGTC 1 cut(s) 2555
Eco130I CCWWGG 2 cut(s) 133, 720
Eco24I GRGCYC 1 cut(s) 25
Eco32I GATATC 2 cut(s) 972, 2041
Eco47I GGWCC 1 cut(s) 226
Eco47III AGCGCT 1 cut(s) 3065
Eco57I CTGAAG 7 cut(s) 1392, 1890, 2144, 2361, 2697, 2952, 3080
Eco88I CYCGRG 1 cut(s) 3027
EcoO109I RGGNCCY 1 cut(s) 1076
EcoRII CCWGG 4 cut(s) 2046, 2886, 2952, 3010
EcoRV GATATC 2 cut(s) 972, 2041
EcoT14I CCWWGG 2 cut(s) 133, 720
EcoT22I ATGCAT 1 cut(s) 1555
EcoT38I GRGCYC 1 cut(s) 25
ErhI CCWWGG 2 cut(s) 133, 720
FaeI CATG 9 cut(s) 293, 581, 702, 724, 783, 1286, 2648, 2843, 2882
FalI AAGNNNNNCTT 2 cut(s) 3139, 3171
FaqI GGGAC 5 cut(s) 151, 212, 804, 2671, 3100
FatI CATG 9 cut(s) 289, 577, 698, 720, 779, 1282, 2644, 2839, 2878
FauI CCCGC 1 cut(s) 2340
FauNDI CATATG 1 cut(s) 979
FblI GTMKAC 4 cut(s) 171, 479, 767, 2963
FokI GGATG 6 cut(s) 341, 1010, 1106, 1434, 1493, 2040
FriOI GRGCYC 1 cut(s) 25
GlaI GCGC 3 cut(s) 78, 1859, 3065
GsuI CTGGAG 1 cut(s) 2342
HaeII RGCGCY 1 cut(s) 3067
HaeIII GGCC 6 cut(s) 5, 719, 1078, 1887, 2495, 2786
HapII CCGG 5 cut(s) 80, 565, 920, 1947, 3069
HgaI GACGC 2 cut(s) 189, 3069
HhaI GCGC 3 cut(s) 79, 1860, 3066
Hin1II CATG 9 cut(s) 293, 581, 702, 724, 783, 1286, 2648, 2843, 2882
Hin6I GCGC 3 cut(s) 77, 1858, 3064
HinP1I GCGC 3 cut(s) 77, 1858, 3064
HincII GTYRAC 1 cut(s) 1672
HindII GTYRAC 1 cut(s) 1672
HpaII CCGG 5 cut(s) 80, 565, 920, 1947, 3069
HphI GGTGA 3 cut(s) 311, 1073, 2969
Hpy166II GTNNAC 8 cut(s) 172, 280, 480, 768, 833, 883, 1672, 2964
Hpy188III TCNNGA 9 cut(s) 388, 592, 947, 1466, 1985, 2359, 2405, 3022, 3069
Hpy8I GTNNAC 8 cut(s) 172, 280, 480, 768, 833, 883, 1672, 2964
Hpy99I CGWCG 1 cut(s) 2952
HpyCH4III ACNGT 8 cut(s) 31, 849, 1014, 1433, 1540, 2195, 2373, 2513
HpyCH4IV ACGT 2 cut(s) 255, 2767
HpyF10VI GCNNNNNNNGC 6 cut(s) 197, 319, 1970, 2234, 2261, 2813
HpySE526I ACGT 2 cut(s) 255, 2767
Hsp92II CATG 9 cut(s) 293, 581, 702, 724, 783, 1286, 2648, 2843, 2882
HspAI GCGC 3 cut(s) 77, 1858, 3064
Kpn2I TCCGGA 1 cut(s) 3068
KpnI GGTACC 1 cut(s) 2158
LmnI GCTCC 5 cut(s) 930, 1234, 2100, 2605, 3071
LweI GCATC 6 cut(s) 203, 903, 1456, 1540, 1982, 2794
MabI ACCWGGT 2 cut(s) 2046, 3010
MaeII ACGT 2 cut(s) 255, 2767
MflI RGATCY 7 cut(s) 86, 181, 1186, 1396, 1897, 2587, 2659
MhlI GDGCHC 4 cut(s) 25, 443, 488, 755
MlsI TGGCCA 2 cut(s) 5, 719
MluNI TGGCCA 2 cut(s) 5, 719
MlyI GAGTC 8 cut(s) 133, 1601, 1642, 1778, 2000, 2349, 2969, 3122
MmeI TCCRAC 5 cut(s) 244, 1051, 1569, 1746, 3077
Mox20I TGGCCA 2 cut(s) 5, 719
Mph1103I ATGCAT 1 cut(s) 1555
MroI TCCGGA 1 cut(s) 3068
MroXI GAANNNNTTC 4 cut(s) 1377, 1834, 1876, 2145
MscI TGGCCA 2 cut(s) 5, 719
MslI CAYNNNNRTG 1 cut(s) 2643
Msp20I TGGCCA 2 cut(s) 5, 719
MspA1I CMGCKG 4 cut(s) 43, 496, 1967, 2008
MspI CCGG 5 cut(s) 80, 565, 920, 1947, 3069
MspR9I CCNGG 5 cut(s) 566, 2048, 2888, 2954, 3012
MvaI CCWGG 4 cut(s) 2048, 2888, 2954, 3012
MwoI GCNNNNNNNGC 6 cut(s) 197, 319, 1970, 2234, 2261, 2813
NciI CCSGG 1 cut(s) 566
NcoI CCATGG 1 cut(s) 720
NdeI CATATG 1 cut(s) 979
NlaIII CATG 9 cut(s) 293, 581, 702, 724, 783, 1286, 2648, 2843, 2882
NlaIV GGNNCC 8 cut(s) 228, 932, 1398, 1422, 2156, 2589, 2607, 2661
NmeAIII GCCGAG 2 cut(s) 42, 1601
NmuCI GTSAC 7 cut(s) 650, 947, 1048, 1410, 2971, 3022, 3106
NsiI ATGCAT 1 cut(s) 1555
NspI RCATGY 2 cut(s) 293, 2843
NspV TTCGAA 2 cut(s) 212, 2250
PaqCI CACCTGC 1 cut(s) 1517
PciI ACATGT 1 cut(s) 289
PcsI WCGNNNNNNNCGW 1 cut(s) 2764
PdmI GAANNNNTTC 4 cut(s) 1377, 1834, 1876, 2145
PflFI GACNNNGTC 1 cut(s) 3112
PflMI CCANNNNNTGG 3 cut(s) 726, 2491, 2597
PleI GAGTC 8 cut(s) 133, 1600, 1642, 1778, 1999, 2349, 2968, 3121
PpsI GAGTC 8 cut(s) 133, 1600, 1642, 1778, 1999, 2349, 2968, 3121
PscI ACATGT 1 cut(s) 289
PshAI GACNNNNGTC 1 cut(s) 3079
PshBI ATTAAT 2 cut(s) 1490, 1682
PsiI TTATAA 2 cut(s) 1388, 2937
Psp6I CCWGG 4 cut(s) 2046, 2886, 2952, 3010
PspGI CCWGG 4 cut(s) 2046, 2886, 2952, 3010
PspN4I GGNNCC 8 cut(s) 228, 932, 1398, 1422, 2156, 2589, 2607, 2661
PspPI GGNCC 3 cut(s) 226, 1076, 2785
PstI CTGCAG 2 cut(s) 366, 1966
PstNI CAGNNNCTG 1 cut(s) 2975
PsuI RGATCY 7 cut(s) 86, 181, 1186, 1396, 1897, 2587, 2659
PsyI GACNNNGTC 1 cut(s) 3112
PvuII CAGCTG 2 cut(s) 1967, 2008
RsaI GTAC 5 cut(s) 1694, 1933, 2156, 2481, 2912
RsaNI GTAC 5 cut(s) 1693, 1932, 2155, 2480, 2911
RseI CAYNNNNRTG 1 cut(s) 2643
Sau96I GGNCC 3 cut(s) 226, 1076, 2785
SchI GAGTC 8 cut(s) 133, 1601, 1642, 1778, 2000, 2349, 2969, 3122
ScrFI CCNGG 5 cut(s) 566, 2048, 2888, 2954, 3012
SduI GDGCHC 4 cut(s) 25, 443, 488, 755
SexAI ACCWGGT 2 cut(s) 2046, 3010
SfaNI GCATC 6 cut(s) 203, 903, 1456, 1540, 1982, 2794
SfcI CTRYAG 3 cut(s) 168, 362, 1962
SfuI TTCGAA 2 cut(s) 212, 2250
SinI GGWCC 1 cut(s) 226
SmiMI CAYNNNNRTG 1 cut(s) 2643
SmlI CTYRAG 2 cut(s) 1287, 1985
SmoI CTYRAG 2 cut(s) 1287, 1985
SsiI CCGC 5 cut(s) 41, 496, 1091, 2057, 2347
SspI AATATT 4 cut(s) 1939, 2331, 2531, 2820
StyD4I CCNGG 5 cut(s) 564, 2046, 2886, 2952, 3010
StyI CCWWGG 2 cut(s) 133, 720
TaaI ACNGT 8 cut(s) 31, 849, 1014, 1433, 1540, 2195, 2373, 2513
TaiI ACGT 2 cut(s) 258, 2770
TaqI TCGA 7 cut(s) 212, 663, 705, 740, 1405, 2250, 2277
TaqII GACCGA 2 cut(s) 214, 3125
TatI WGTACW 1 cut(s) 1692
TseFI GTSAC 7 cut(s) 650, 947, 1048, 1410, 2971, 3022, 3106
Tsp45I GTSAC 7 cut(s) 650, 947, 1048, 1410, 2971, 3022, 3106
TspDTI ATGAA 9 cut(s) 459, 560, 768, 966, 1271, 1731, 1869, 2738, 2871
TspGWI ACGGA 1 cut(s) 1500
Tth111I GACNNNGTC 1 cut(s) 3112
Van91I CCANNNNNTGG 3 cut(s) 726, 2491, 2597
VpaK11BI GGWCC 1 cut(s) 226
VspI ATTAAT 2 cut(s) 1490, 1682
XapI RAATTY 6 cut(s) 268, 396, 445, 693, 1744, 2487
XceI RCATGY 2 cut(s) 293, 2843
XcmI CCANNNNNNNNNTGG 1 cut(s) 1225
XmiI GTMKAC 4 cut(s) 171, 479, 767, 2963
XmnI GAANNNNTTC 4 cut(s) 1377, 1834, 1876, 2145
Zsp2I ATGCAT 1 cut(s) 1555
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.