pycom05g25650

Belongs to the NPH3 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0014576
Physical Location & Seq
Reverse (-)
26981150 .. 26983241
2092 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1635 bp
ATGTCATTTCATCTGCATAAGTTTCCTTTGCTCTCAAAAAGTGGGGTTATGGAAAGACTGATTTCCGAAGCATCTGAAGGAGAAGAAGGACGTGTCATAACCATCCCTGATATTCCTGGTGGGGCTAAAACATTTGAATTGGTAGCTAAGTTCTGCTACGGGGTGAAATTTGAGCTAACTGCCTCAAATGTTGTATATCTACGATGTGCTGCTGAGCATCTAGAAATGACTGAAGAGTACGGGGAGGACAACTTAATCACACAAAGTGAAGCCTTTCTCAATCAAGTAGTTCTTCGAAATTGGAAGGACTCTCTAAAGGCACTTCAAACTTGTGATGACATTCTCCCTTATGCTGAAGAACTCAACATTCCAAAAAGGTGCATGGAGTCACTTGCCACAAAAGCATCCACTGATCCTAATTTGTTTGGGTGGCCTGTCAAGGAGCATGGCGGCCCTATGCAAAGTCCTGGTGGGAGTGTCCTGTGGAATGGAATAAGTACAGGGGCCAGACCAAAGAAATCAAGTTCAGATTGGTGGTACGAGGATGCATCAACCTTAAGCTTGCCTCTCTACCAGAGGCTGATTTCGGTCATGGAATCTCGTGGCATCAAACAGGAGATTATTGCAGCCAAAGAGAGATCGATCACTTTTTATGCAAAAAAGTACCTTCCCGGGCTCAATCGGCGTCAAGGCAATGATTATAGTACTAATCTTAAACCAGTGTCCTTGGGGTCCCCACCATCAGAAGAAGACCAGAAGCTCTTACTTGAAGAGGTCGATCGGTTACTTCCATATCAGAAGCGTGTAGTTCCAACTAAATTTTTGTTTGGTCTACTTCGAACAGCCATGATTCTTCGAGCGAACCCTTCTTGCATATCAAATTTTGAGAAAAGAATTGGCATGCAGCTTGATCAAGCTACGTTGGAAGATCTTTTGATGCCAAACTTCTCTTATTCTATGGAGACTCTATACAATGTTGACTGCGCACAACGAATTCTAGACCACTTCCTTGCCATGGAACAAATTACAGGAGGAGTGTCTCCATGTTCGGCCGATGATGAACAATTGATCGGGTCTTCAGGCCCTTCACTGACCCCAATCACAATGGTAGCCAAGCTCATTGATGGATACCTTGCAGAGGTCGCCCCTGACGTCAACTTGAAGCTCCCTAAGTTTCAGGCTCTTGCTGCTGCTGTTCCAGAATATGCCAGACCCTTGGATGATGGTCTTTACCGTGCAATAGATATTTTTTTGAAGTCACACCCATGGTTGGCAGAGTCCGACAGGGAACAGCTCTGCCGGTTGATGGACTGCCAGAAGCTTTCCTTGGAAGCTTGCACTCATGCTGCACAGAACGAGCGGCTACCCCTTAGAATAGTTGTTCAAGTTCTCTTCTTTGAGCAGCTTCAGCTTAGGACATCCATTGCAGACTGCTTTCTGGTTTCAGAAAATCTTGATGGATCAAGACAGTTAAGAAGCGGGTTTGCTGGGTCTACTGAGGGAGGCTGGGCCACAACCGTGAGGGAGAATCAGGTTTTAAAGGTTGGGATGGATAATATGAGGATGCGCGTATCTGAGCTTGAGAAGGAGTGTTCGAACATGAGACAAGATCGATCGAGAAGTTGGGTCGCGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
BTB NPH3

Protein Analysis

545

Amino Acids

61.03

Weight (kDa)

5.4

Isoelectric Point (pI)

46.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
NPH3 PF03000 177 - 446 2.5e-93 NPH3 family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014576)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G30440
fragaria_vesca FvH4_3g09890 FvH4_3g09890
malus_domestica MD05G1275200.v1.1 MD10G1254600.v1.1
prunus_persica Prupe.4G088800_v2.0.a1
pyrus_communis pycom05g25650 pycom10g21020
rosa_chinensis RchiOBHm_Chr5g0015601
rosa_laevigata RLG00000023153 RLG00000032212
rosa_multiflora Rmu_sc0003230.1_g000001
rosa_roxburghii Rroxscaffold_1G00060870
rosa_rugosa Rorug05G0028800 Rorug05G0028800
rosa_samantha Rh5AG122100
rosa_wichuraiana Rw5G010530

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1155
Acc16I TGCGCA 1 cut(s) 985
AccBSI CCGCTC 1 cut(s) 1360
AccI GTMKAC 2 cut(s) 832, 1493
AccII CGCG 2 cut(s) 1569, 1631
AciI CCGC 3 cut(s) 450, 1360, 1479
AclWI GGATC 2 cut(s) 407, 1468
AcoI YGGCCR 1 cut(s) 1050
AcsI RAATTY 4 cut(s) 167, 818, 880, 993
AcuI CTGAAG 5 cut(s) 96, 252, 375, 1062, 1391
AcyI GRCGYC 2 cut(s) 685, 1152
AdeI CACNNNGTG 1 cut(s) 266
AfaI GTAC 5 cut(s) 239, 499, 539, 665, 706
AfiI CCNNNNNNNGG 4 cut(s) 1015, 1138, 1270, 1306
AflII CTTAAG 1 cut(s) 556
AflIII ACRYGT 1 cut(s) 91
AgsI TTSAA 6 cut(s) 137, 326, 770, 1162, 1255, 1385
AjiI CACGTC 1 cut(s) 92
AjnI CCWGG 2 cut(s) 115, 466
AjuI GAANNNNNNNTTGG 2 cut(s) 1310, 1342
AleI CACNNNNGTG 1 cut(s) 1517
Alw26I GTCTC 3 cut(s) 956, 1044, 1597
AlwI GGATC 2 cut(s) 407, 1468
AlwNI CAGNNNCTG 1 cut(s) 580
Ama87I CYCGRG 1 cut(s) 671
AoxI GGCC 6 cut(s) 431, 451, 504, 1050, 1081, 1509
ApeKI GCWGC 7 cut(s) 209, 626, 904, 1187, 1190, 1346, 1402
ApoI RAATTY 4 cut(s) 167, 818, 880, 993
Asp700I GAANNNNTTC 1 cut(s) 273
AspLEI GCGC 2 cut(s) 986, 1569
AspS9I GGNCC 5 cut(s) 452, 504, 732, 1082, 1509
AsuC2I CCSGG 2 cut(s) 672, 673
AsuHPI GGTGA 1 cut(s) 175
AsuII TTCGAA 3 cut(s) 295, 838, 1595
AvaI CYCGRG 1 cut(s) 671
AvaII GGWCC 1 cut(s) 732
BanII GRGCYC 1 cut(s) 678
BauI CACGAG 1 cut(s) 600
BbsI GAAGAC 2 cut(s) 756, 1068
BbvI GCAGC 7 cut(s) 196, 638, 916, 1174, 1177, 1333, 1414
BccI CCATC 7 cut(s) 110, 748, 1118, 1217, 1300, 1451, 1543
BciT130I CCWGG 2 cut(s) 117, 468
BciVI GTATCC 1 cut(s) 1121
BclI TGATCA 1 cut(s) 910
BcnI CCSGG 2 cut(s) 672, 673
BcoDI GTCTC 3 cut(s) 956, 1044, 1597
BfaI CTAG 2 cut(s) 221, 998
BfrI CTTAAG 1 cut(s) 556
BfuI GTATCC 1 cut(s) 1121
BglII AGATCT 1 cut(s) 928
BisI GCNGC 9 cut(s) 210, 451, 627, 905, 1188, 1191, 1347, 1361, 1403
BlpI GCTNAGC 1 cut(s) 213
BlsI GCNGC 9 cut(s) 211, 452, 628, 906, 1189, 1192, 1348, 1362, 1404
BmcAI AGTACT 1 cut(s) 706
Bme1390I CCNGG 4 cut(s) 117, 468, 672, 673
Bme18I GGWCC 1 cut(s) 732
BmeT110I CYCGRG 1 cut(s) 671
BmgBI CACGTC 1 cut(s) 92
BmgT120I GGNCC 5 cut(s) 452, 504, 732, 1082, 1509
BmiI GGNNCC 3 cut(s) 505, 733, 734
BmrFI CCNGG 4 cut(s) 117, 468, 672, 673
BmsI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 927, 1554
BpiI GAAGAC 2 cut(s) 756, 1068
Bpu10I CCTNAGC 1 cut(s) 1412
Bpu1102I GCTNAGC 1 cut(s) 213
Bpu14I TTCGAA 3 cut(s) 295, 838, 1595
BpuEI CTTGAG 1 cut(s) 1601
BpuMI CCSGG 2 cut(s) 672, 673
Bsa29I ATCGAT 2 cut(s) 641, 1612
BsaHI GRCGYC 2 cut(s) 685, 1152
BsaJI CCNNGG 6 cut(s) 671, 726, 1014, 1215, 1265, 1326
Bsc4I CCNNNNNNNGG 4 cut(s) 1015, 1138, 1270, 1306
Bse118I RCCGGY 1 cut(s) 1299
Bse1I ACTGG 1 cut(s) 719
Bse3DI GCAATG 2 cut(s) 700, 1422
BseBI CCWGG 2 cut(s) 117, 468
BseCI ATCGAT 2 cut(s) 641, 1612
BseDI CCNNGG 6 cut(s) 671, 726, 1014, 1215, 1265, 1326
BseGI GGATG 7 cut(s) 102, 404, 550, 1225, 1418, 1554, 1569
BseLI CCNNNNNNNGG 4 cut(s) 1015, 1138, 1270, 1306
BseMI GCAATG 2 cut(s) 700, 1422
BseMII CTCAG 3 cut(s) 204, 1488, 1566
BseNI ACTGG 1 cut(s) 719
BseRI GAGGAG 1 cut(s) 1047
BseX3I CGGCCG 1 cut(s) 1050
BseXI GCAGC 7 cut(s) 196, 638, 916, 1174, 1177, 1333, 1414
BseYI CCCAGC 2 cut(s) 1487, 1506
BsgI GTGCAG 1 cut(s) 1332
Bsh1236I CGCG 2 cut(s) 1569, 1631
Bsh1285I CGRYCG 3 cut(s) 781, 1053, 1616
BshFI GGCC 6 cut(s) 433, 453, 506, 1052, 1083, 1511
BshVI ATCGAT 2 cut(s) 641, 1612
BsiEI CGRYCG 3 cut(s) 781, 1053, 1616
BsiHKCI CYCGRG 1 cut(s) 671
BsiSI CCGG 2 cut(s) 672, 1300
BslFI GGGAC 1 cut(s) 718
BslI CCNNNNNNNGG 4 cut(s) 1015, 1138, 1270, 1306
BsmAI GTCTC 3 cut(s) 956, 1044, 1597
BsmFI GGGAC 1 cut(s) 718
BsnI GGCC 6 cut(s) 433, 453, 506, 1052, 1083, 1511
BsoBI CYCGRG 1 cut(s) 671
Bsp119I TTCGAA 3 cut(s) 295, 838, 1595
Bsp1286I GDGCHC 1 cut(s) 678
Bsp1720I GCTNAGC 1 cut(s) 213
Bsp19I CCATGG 2 cut(s) 1014, 1265
BspACI CCGC 3 cut(s) 450, 1360, 1479
BspANI GGCC 6 cut(s) 433, 453, 506, 1052, 1083, 1511
BspCNI CTCAG 3 cut(s) 205, 1489, 1567
BspDI ATCGAT 2 cut(s) 641, 1612
BspFNI CGCG 2 cut(s) 1569, 1631
BspLI GGNNCC 3 cut(s) 505, 733, 734
BspPI GGATC 2 cut(s) 407, 1468
BspT104I TTCGAA 3 cut(s) 295, 838, 1595
BspTI CTTAAG 1 cut(s) 556
BsrBI CCGCTC 1 cut(s) 1360
BsrDI GCAATG 2 cut(s) 700, 1422
BsrFI RCCGGY 1 cut(s) 1299
BsrI ACTGG 1 cut(s) 719
BssAI RCCGGY 1 cut(s) 1299
BssECI CCNNGG 6 cut(s) 671, 726, 1014, 1215, 1265, 1326
BssNI GRCGYC 2 cut(s) 685, 1152
BssSI CACGAG 1 cut(s) 600
BssT1I CCWWGG 5 cut(s) 726, 1014, 1215, 1265, 1326
Bst2BI CACGAG 1 cut(s) 600
Bst2UI CCWGG 2 cut(s) 117, 468
Bst4CI ACNGT 3 cut(s) 1235, 1470, 1519
Bst6I CTCTTC 3 cut(s) 228, 765, 1397
BstACI GRCGYC 2 cut(s) 685, 1152
BstAFI CTTAAG 1 cut(s) 556
BstBI TTCGAA 3 cut(s) 295, 838, 1595
BstC8I GCNNGC 3 cut(s) 563, 902, 1336
BstDEI CTNAG 7 cut(s) 147, 213, 1170, 1370, 1412, 1497, 1575
BstDSI CCRYGG 2 cut(s) 1014, 1265
BstENI CCTNNNNNAGG 1 cut(s) 1136
BstF5I GGATG 7 cut(s) 102, 404, 550, 1225, 1418, 1554, 1569
BstFNI CGCG 2 cut(s) 1569, 1631
BstHHI GCGC 2 cut(s) 986, 1569
BstMAI GTCTC 3 cut(s) 956, 1044, 1597
BstMCI CGRYCG 3 cut(s) 781, 1053, 1616
BstMWI GCNNNNNNNGC 5 cut(s) 401, 682, 1142, 1187, 1408
BstNI CCWGG 2 cut(s) 117, 468
BstNSI RCATGY 1 cut(s) 904
BstSCI CCNGG 4 cut(s) 115, 466, 670, 671
BstUI CGCG 2 cut(s) 1569, 1631
BstV1I GCAGC 7 cut(s) 196, 638, 916, 1174, 1177, 1333, 1414
BstV2I GAAGAC 2 cut(s) 756, 1068
BstX2I RGATCY 1 cut(s) 928
BstXI CCANNNNNNTGG 1 cut(s) 1216
BstYI RGATCY 1 cut(s) 928
BstZI CGGCCG 1 cut(s) 1050
Bsu15I ATCGAT 2 cut(s) 641, 1612
BsuI GTATCC 1 cut(s) 1121
BsuRI GGCC 6 cut(s) 433, 453, 506, 1052, 1083, 1511
BsuTUI ATCGAT 2 cut(s) 641, 1612
BtgI CCRYGG 2 cut(s) 1014, 1265
BtrI CACGTC 1 cut(s) 92
BtsCI GGATG 7 cut(s) 102, 404, 550, 1225, 1418, 1554, 1569
BtsIMutI CAGTG 3 cut(s) 408, 726, 1088
Cac8I GCNNGC 3 cut(s) 563, 902, 1336
CaiI CAGNNNCTG 1 cut(s) 580
CfoI GCGC 2 cut(s) 986, 1569
Cfr10I RCCGGY 1 cut(s) 1299
Cfr13I GGNCC 5 cut(s) 452, 504, 732, 1082, 1509
Cfr9I CCCGGG 1 cut(s) 671
ClaI ATCGAT 2 cut(s) 641, 1612
CseI GACGC 1 cut(s) 674
Csp6I GTAC 5 cut(s) 238, 498, 538, 664, 705
CviQI GTAC 5 cut(s) 238, 498, 538, 664, 705
DdeI CTNAG 7 cut(s) 147, 213, 1170, 1370, 1412, 1497, 1575
DraI TTTAAA 1 cut(s) 1539
DraIII CACNNNGTG 1 cut(s) 266
EaeI YGGCCR 1 cut(s) 1050
EagI CGGCCG 1 cut(s) 1050
Eam1104I CTCTTC 3 cut(s) 228, 765, 1397
EarI CTCTTC 3 cut(s) 228, 765, 1397
EclXI CGGCCG 1 cut(s) 1050
Eco130I CCWWGG 5 cut(s) 726, 1014, 1215, 1265, 1326
Eco24I GRGCYC 1 cut(s) 678
Eco47I GGWCC 1 cut(s) 732
Eco52I CGGCCG 1 cut(s) 1050
Eco57I CTGAAG 5 cut(s) 96, 252, 375, 1062, 1391
Eco88I CYCGRG 1 cut(s) 671
EcoNI CCTNNNNNAGG 1 cut(s) 1136
EcoO109I RGGNCCY 2 cut(s) 732, 1082
EcoRI GAATTC 1 cut(s) 993
EcoRII CCWGG 2 cut(s) 115, 466
EcoT14I CCWWGG 5 cut(s) 726, 1014, 1215, 1265, 1326
EcoT22I ATGCAT 1 cut(s) 550
EcoT38I GRGCYC 1 cut(s) 678
ErhI CCWWGG 5 cut(s) 726, 1014, 1215, 1265, 1326
FalI AAGNNNNNCTT 4 cut(s) 276, 308, 1310, 1342
FaqI GGGAC 1 cut(s) 718
FauI CCCGC 1 cut(s) 1472
FbaI TGATCA 1 cut(s) 910
FblI GTMKAC 2 cut(s) 832, 1493
Fnu4HI GCNGC 9 cut(s) 210, 451, 627, 905, 1188, 1191, 1347, 1361, 1403
FokI GGATG 7 cut(s) 89, 391, 557, 1232, 1405, 1561, 1576
FriOI GRGCYC 1 cut(s) 678
Fsp4HI GCNGC 9 cut(s) 210, 451, 627, 905, 1188, 1191, 1347, 1361, 1403
FspBI CTAG 2 cut(s) 221, 998
FspI TGCGCA 1 cut(s) 985
GlaI GCGC 2 cut(s) 985, 1568
GluI GCNGC 9 cut(s) 210, 451, 627, 905, 1188, 1191, 1347, 1361, 1403
GsaI CCCAGC 2 cut(s) 1491, 1510
HaeIII GGCC 6 cut(s) 433, 453, 506, 1052, 1083, 1511
HapII CCGG 2 cut(s) 672, 1300
HgaI GACGC 1 cut(s) 674
HhaI GCGC 2 cut(s) 986, 1569
Hin1I GRCGYC 2 cut(s) 685, 1152
Hin6I GCGC 2 cut(s) 984, 1567
HinP1I GCGC 2 cut(s) 984, 1567
HincII GTYRAC 2 cut(s) 979, 1156
HindII GTYRAC 2 cut(s) 979, 1156
HindIII AAGCTT 3 cut(s) 559, 1319, 1332
HinfI GANTC 7 cut(s) 308, 386, 596, 850, 964, 1277, 1528
HpaII CCGG 2 cut(s) 672, 1300
HphI GGTGA 1 cut(s) 175
Hpy166II GTNNAC 4 cut(s) 833, 979, 1156, 1494
Hpy188I TCNGA 8 cut(s) 67, 76, 529, 745, 798, 1282, 1447, 1576
Hpy188III TCNNGA 6 cut(s) 221, 998, 1199, 1454, 1464, 1617
Hpy8I GTNNAC 4 cut(s) 833, 979, 1156, 1494
HpyAV CCTTC 7 cut(s) 71, 80, 298, 677, 876, 1095, 1579
HpyCH4III ACNGT 3 cut(s) 1235, 1470, 1519
HpyCH4IV ACGT 3 cut(s) 91, 920, 1152
HpyF10VI GCNNNNNNNGC 5 cut(s) 401, 682, 1142, 1187, 1408
HpyF3I CTNAG 7 cut(s) 147, 213, 1170, 1370, 1412, 1497, 1575
HpySE526I ACGT 3 cut(s) 91, 920, 1152
Hsp92I GRCGYC 2 cut(s) 685, 1152
HspAI GCGC 2 cut(s) 984, 1567
KflI GGGWCCC 1 cut(s) 732
Ksp22I TGATCA 1 cut(s) 910
LmnI GCTCC 2 cut(s) 442, 1170
Lsp1109I GCAGC 7 cut(s) 196, 638, 916, 1174, 1177, 1333, 1414
LweI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 927, 1554
MaeI CTAG 2 cut(s) 221, 998
MaeII ACGT 3 cut(s) 91, 920, 1152
MaeIII GTNAC 3 cut(s) 387, 783, 1257
MbiI CCGCTC 1 cut(s) 1360
MfeI CAATTG 1 cut(s) 1064
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 1 cut(s) 678
MlyI GAGTC 4 cut(s) 302, 395, 958, 1286
MmeI TCCRAC 3 cut(s) 836, 903, 1305
Mph1103I ATGCAT 1 cut(s) 550
MroXI GAANNNNTTC 1 cut(s) 273
MseI TTAA 5 cut(s) 254, 557, 714, 1472, 1538
MslI CAYNNNNRTG 2 cut(s) 1264, 1517
MspCI CTTAAG 1 cut(s) 556
MspI CCGG 2 cut(s) 672, 1300
MspR9I CCNGG 4 cut(s) 117, 468, 672, 673
MunI CAATTG 1 cut(s) 1064
MvaI CCWGG 2 cut(s) 117, 468
MvnI CGCG 2 cut(s) 1569, 1631
MwoI GCNNNNNNNGC 5 cut(s) 401, 682, 1142, 1187, 1408
NciI CCSGG 2 cut(s) 672, 673
NcoI CCATGG 2 cut(s) 1014, 1265
NlaIV GGNNCC 3 cut(s) 505, 733, 734
NmuCI GTSAC 2 cut(s) 387, 1257
NsbI TGCGCA 1 cut(s) 985
NsiI ATGCAT 1 cut(s) 550
NspI RCATGY 1 cut(s) 904
NspV TTCGAA 3 cut(s) 295, 838, 1595
OliI CACNNNNGTG 1 cut(s) 1517
PaeI GCATGC 1 cut(s) 904
PcsI WCGNNNNNNNCGW 1 cut(s) 1149
PdmI GAANNNNTTC 1 cut(s) 273
PfeI GAWTC 3 cut(s) 596, 850, 1528
PkrI GCNGC 9 cut(s) 211, 452, 628, 906, 1189, 1192, 1348, 1362, 1404
Ple19I CGATCG 2 cut(s) 781, 1616
PleI GAGTC 4 cut(s) 302, 394, 958, 1285
PpsI GAGTC 4 cut(s) 302, 394, 958, 1285
PpuMI RGGWCCY 1 cut(s) 732
Psp5II RGGWCCY 1 cut(s) 732
Psp6I CCWGG 2 cut(s) 115, 466
PspFI CCCAGC 2 cut(s) 1487, 1506
PspGI CCWGG 2 cut(s) 115, 466
PspN4I GGNNCC 3 cut(s) 505, 733, 734
PspPI GGNCC 5 cut(s) 452, 504, 732, 1082, 1509
PspPPI RGGWCCY 1 cut(s) 732
PstNI CAGNNNCTG 1 cut(s) 580
PsuI RGATCY 1 cut(s) 928
PvuI CGATCG 2 cut(s) 781, 1616
RsaI GTAC 5 cut(s) 239, 499, 539, 665, 706
RsaNI GTAC 5 cut(s) 238, 498, 538, 664, 705
RseI CAYNNNNRTG 2 cut(s) 1264, 1517
SaqAI TTAA 5 cut(s) 254, 557, 714, 1472, 1538
SatI GCNGC 9 cut(s) 210, 451, 627, 905, 1188, 1191, 1347, 1361, 1403
Sau96I GGNCC 5 cut(s) 452, 504, 732, 1082, 1509
ScaI AGTACT 1 cut(s) 706
SchI GAGTC 4 cut(s) 302, 395, 958, 1286
ScrFI CCNGG 4 cut(s) 117, 468, 672, 673
SduI GDGCHC 1 cut(s) 678
SfaNI GCATC 8 cut(s) 80, 226, 413, 535, 557, 615, 927, 1554
SfuI TTCGAA 3 cut(s) 295, 838, 1595
SinI GGWCC 1 cut(s) 732
SmaI CCCGGG 1 cut(s) 673
SmiMI CAYNNNNRTG 2 cut(s) 1264, 1517
SmlI CTYRAG 2 cut(s) 556, 1580
SmoI CTYRAG 2 cut(s) 556, 1580
SphI GCATGC 1 cut(s) 904
SsiI CCGC 3 cut(s) 450, 1360, 1479
SspMI CTAG 2 cut(s) 221, 998
StyD4I CCNGG 4 cut(s) 115, 466, 670, 671
StyI CCWWGG 5 cut(s) 726, 1014, 1215, 1265, 1326
TaaI ACNGT 3 cut(s) 1235, 1470, 1519
TaiI ACGT 3 cut(s) 94, 923, 1155
TaqI TCGA 8 cut(s) 295, 641, 777, 838, 856, 1595, 1612, 1616
TaqII GACCGA 1 cut(s) 577
TatI WGTACW 2 cut(s) 497, 704
TauI GCSGC 2 cut(s) 453, 1363
TfiI GAWTC 3 cut(s) 596, 850, 1528
Tru1I TTAA 5 cut(s) 254, 557, 714, 1472, 1538
Tru9I TTAA 5 cut(s) 254, 557, 714, 1472, 1538
TscAI CASTG 3 cut(s) 415, 726, 1095
TseFI GTSAC 2 cut(s) 387, 1257
TseI GCWGC 7 cut(s) 209, 626, 904, 1187, 1190, 1346, 1402
Tsp45I GTSAC 2 cut(s) 387, 1257
TspDTI ATGAA 1 cut(s) 1074
TspMI CCCGGG 1 cut(s) 671
TspRI CASTG 3 cut(s) 415, 726, 1095
Vha464I CTTAAG 1 cut(s) 556
VpaK11BI GGWCC 1 cut(s) 732
XagI CCTNNNNNAGG 1 cut(s) 1136
XapI RAATTY 4 cut(s) 167, 818, 880, 993
XbaI TCTAGA 2 cut(s) 220, 997
XceI RCATGY 1 cut(s) 904
XmaI CCCGGG 1 cut(s) 671
XmiI GTMKAC 2 cut(s) 832, 1493
XmnI GAANNNNTTC 1 cut(s) 273
XspI CTAG 2 cut(s) 221, 998
ZraI GACGTC 1 cut(s) 1153
ZrmI AGTACT 1 cut(s) 706
Zsp2I ATGCAT 1 cut(s) 550
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.