Src homology 3 domains
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G18060 |
| fragaria_vesca | FvH4_3g06560 FvH4_3g06560 FvH4_3g06560 FvH4_3g33220 |
| malus_domestica | MD05G1292300.v1.1 MD10G1268100.v1.1 |
| prunus_persica | Prupe.4G073100_v2.0.a1 |
| pyrus_communis | pycom05g26860 pycom10g22440 |
| rosa_chinensis | RchiOBHm_Chr5g0012601 |
| rosa_laevigata | RLG00000031928 |
| rosa_multiflora | Rmu_sc0003577.1_g000008 |
| rosa_roxburghii | Rroxscaffold_1G00064070 |
| rosa_rugosa | Rorug05G0002800 Rorug05G0002900 |
| rosa_samantha | Rh5AG096700 Rh5BG093000 Rh5CG105800 Rh5DG092400 |
| rosa_wichuraiana | Rw5G008470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 11 |
| Acc36I | ACCTGC | 1 cut(s) | 103 |
| AciI | CCGC | 3 cut(s) | 362, 650, 1081 |
| AclI | AACGTT | 1 cut(s) | 538 |
| AclWI | GGATC | 2 cut(s) | 17, 473 |
| AcuI | CTGAAG | 3 cut(s) | 62, 690, 942 |
| AfaI | GTAC | 2 cut(s) | 233, 911 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 112 |
| AgsI | TTSAA | 4 cut(s) | 320, 451, 776, 827 |
| Alw21I | GWGCWC | 1 cut(s) | 508 |
| Alw26I | GTCTC | 4 cut(s) | 202, 547, 560, 844 |
| AlwI | GGATC | 2 cut(s) | 17, 473 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 40 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 988, 1020 |
| AspS9I | GGNCC | 1 cut(s) | 237 |
| AsuHPI | GGTGA | 5 cut(s) | 422, 830, 989, 1012, 1118 |
| AvaII | GGWCC | 1 cut(s) | 237 |
| BarI | GAAGNNNNNNTAC | 4 cut(s) | 597, 629, 688, 720 |
| BauI | CACGAG | 2 cut(s) | 243, 600 |
| BbsI | GAAGAC | 2 cut(s) | 450, 598 |
| Bbv12I | GWGCWC | 1 cut(s) | 508 |
| BccI | CCATC | 6 cut(s) | 67, 1008, 1015, 1041, 1096, 1097 |
| BcoDI | GTCTC | 4 cut(s) | 202, 547, 560, 844 |
| BfaI | CTAG | 1 cut(s) | 221 |
| BfmI | CTRYAG | 3 cut(s) | 346, 576, 641 |
| BfuAI | ACCTGC | 1 cut(s) | 103 |
| Bme18I | GGWCC | 1 cut(s) | 237 |
| BmgT120I | GGNCC | 1 cut(s) | 237 |
| BmiI | GGNNCC | 1 cut(s) | 328 |
| BmsI | GCATC | 6 cut(s) | 67, 192, 403, 407, 508, 956 |
| BpiI | GAAGAC | 2 cut(s) | 450, 598 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 824, 856, 878, 910 |
| Bpu10I | CCTNAGC | 1 cut(s) | 390 |
| BsaI | GGTCTC | 1 cut(s) | 844 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 112 |
| Bse1I | ACTGG | 5 cut(s) | 96, 163, 372, 774, 1092 |
| Bse3DI | GCAATG | 1 cut(s) | 498 |
| BseGI | GGATG | 4 cut(s) | 82, 1019, 1052, 1088 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BseMI | GCAATG | 1 cut(s) | 498 |
| BseMII | CTCAG | 6 cut(s) | 186, 330, 788, 822, 855, 909 |
| BseNI | ACTGG | 5 cut(s) | 96, 163, 372, 774, 1092 |
| BseRI | GAGGAG | 2 cut(s) | 67, 858 |
| BsgI | GTGCAG | 1 cut(s) | 267 |
| BsiHKAI | GWGCWC | 1 cut(s) | 508 |
| BslFI | GGGAC | 1 cut(s) | 169 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 112 |
| BsmAI | GTCTC | 4 cut(s) | 202, 547, 560, 844 |
| BsmFI | GGGAC | 1 cut(s) | 169 |
| Bso31I | GGTCTC | 1 cut(s) | 844 |
| Bsp1286I | GDGCHC | 1 cut(s) | 508 |
| Bsp1407I | TGTACA | 1 cut(s) | 231 |
| Bsp143I | GATC | 3 cut(s) | 22, 478, 1096 |
| BspACI | CCGC | 3 cut(s) | 362, 650, 1081 |
| BspCNI | CTCAG | 6 cut(s) | 185, 331, 789, 823, 854, 908 |
| BspLI | GGNNCC | 1 cut(s) | 328 |
| BspMAI | CTGCAG | 1 cut(s) | 645 |
| BspMI | ACCTGC | 1 cut(s) | 103 |
| BspPI | GGATC | 2 cut(s) | 17, 473 |
| BspTNI | GGTCTC | 1 cut(s) | 844 |
| BsrDI | GCAATG | 1 cut(s) | 498 |
| BsrGI | TGTACA | 1 cut(s) | 231 |
| BsrI | ACTGG | 5 cut(s) | 96, 163, 372, 774, 1092 |
| BssMI | GATC | 3 cut(s) | 22, 478, 1096 |
| BssSI | CACGAG | 2 cut(s) | 243, 600 |
| Bst2BI | CACGAG | 2 cut(s) | 243, 600 |
| Bst4CI | ACNGT | 2 cut(s) | 231, 347 |
| Bst6I | CTCTTC | 2 cut(s) | 38, 44 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 719 |
| BstAUI | TGTACA | 1 cut(s) | 231 |
| BstC8I | GCNNGC | 3 cut(s) | 132, 645, 1079 |
| BstDEI | CTNAG | 8 cut(s) | 172, 339, 390, 797, 831, 841, 895, 962 |
| BstF5I | GGATG | 4 cut(s) | 82, 1019, 1052, 1088 |
| BstKTI | GATC | 3 cut(s) | 25, 481, 1099 |
| BstMAI | GTCTC | 4 cut(s) | 202, 547, 560, 844 |
| BstMBI | GATC | 3 cut(s) | 22, 478, 1096 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 109, 395, 653, 683, 710, 716, 719, 728 |
| BstNSI | RCATGY | 1 cut(s) | 428 |
| BstSFI | CTRYAG | 3 cut(s) | 346, 576, 641 |
| BstV2I | GAAGAC | 2 cut(s) | 450, 598 |
| BstX2I | RGATCY | 2 cut(s) | 22, 478 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1014 |
| BstYI | RGATCY | 2 cut(s) | 22, 478 |
| BtsCI | GGATG | 4 cut(s) | 82, 1019, 1052, 1088 |
| BtsIMutI | CAGTG | 5 cut(s) | 157, 379, 767, 946, 1099 |
| BveI | ACCTGC | 1 cut(s) | 103 |
| Cac8I | GCNNGC | 3 cut(s) | 132, 645, 1079 |
| CaiI | CAGNNNCTG | 1 cut(s) | 40 |
| Cfr13I | GGNCC | 1 cut(s) | 237 |
| Csp6I | GTAC | 2 cut(s) | 232, 910 |
| CviAII | CATG | 2 cut(s) | 425, 682 |
| CviQI | GTAC | 2 cut(s) | 232, 910 |
| DdeI | CTNAG | 8 cut(s) | 172, 339, 390, 797, 831, 841, 895, 962 |
| DpnI | GATC | 3 cut(s) | 24, 480, 1098 |
| DpnII | GATC | 3 cut(s) | 22, 478, 1096 |
| Eam1104I | CTCTTC | 2 cut(s) | 38, 44 |
| EarI | CTCTTC | 2 cut(s) | 38, 44 |
| Eco31I | GGTCTC | 1 cut(s) | 844 |
| Eco47I | GGWCC | 1 cut(s) | 237 |
| Eco57I | CTGAAG | 3 cut(s) | 62, 690, 942 |
| FaeI | CATG | 2 cut(s) | 428, 685 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 733, 765 |
| FaqI | GGGAC | 1 cut(s) | 169 |
| FatI | CATG | 2 cut(s) | 424, 681 |
| FokI | GGATG | 4 cut(s) | 89, 1026, 1059, 1075 |
| FspBI | CTAG | 1 cut(s) | 221 |
| Hin1II | CATG | 2 cut(s) | 428, 685 |
| HindIII | AAGCTT | 2 cut(s) | 702, 964 |
| HinfI | GANTC | 4 cut(s) | 860, 877, 1003, 1084 |
| HphI | GGTGA | 5 cut(s) | 422, 830, 989, 1012, 1118 |
| Hpy166II | GTNNAC | 3 cut(s) | 240, 294, 1114 |
| Hpy188III | TCNNGA | 5 cut(s) | 588, 623, 754, 1011, 1100 |
| Hpy8I | GTNNAC | 3 cut(s) | 240, 294, 1114 |
| HpyAV | CCTTC | 3 cut(s) | 770, 949, 1016 |
| HpyCH4III | ACNGT | 2 cut(s) | 231, 347 |
| HpyCH4IV | ACGT | 2 cut(s) | 538, 908 |
| HpyCH4V | TGCA | 9 cut(s) | 205, 248, 398, 635, 643, 713, 767, 947, 1032 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 109, 395, 653, 683, 710, 716, 719, 728 |
| HpyF3I | CTNAG | 8 cut(s) | 172, 339, 390, 797, 831, 841, 895, 962 |
| HpySE526I | ACGT | 2 cut(s) | 538, 908 |
| Hsp92II | CATG | 2 cut(s) | 428, 685 |
| Kzo9I | GATC | 3 cut(s) | 22, 478, 1096 |
| LmnI | GCTCC | 3 cut(s) | 108, 511, 871 |
| LweI | GCATC | 6 cut(s) | 67, 192, 403, 407, 508, 956 |
| MaeI | CTAG | 1 cut(s) | 221 |
| MaeII | ACGT | 2 cut(s) | 538, 908 |
| MaeIII | GTNAC | 2 cut(s) | 374, 977 |
| MalI | GATC | 3 cut(s) | 24, 480, 1098 |
| MboI | GATC | 3 cut(s) | 22, 478, 1096 |
| MflI | RGATCY | 2 cut(s) | 22, 478 |
| MhlI | GDGCHC | 1 cut(s) | 508 |
| MluCI | AATT | 2 cut(s) | 668, 787 |
| MlyI | GAGTC | 2 cut(s) | 869, 1012 |
| MmeI | TCCRAC | 1 cut(s) | 1079 |
| MnlI | CCTC | 9 cut(s) | 39, 45, 48, 187, 334, 750, 814, 879, 1037 |
| MseI | TTAA | 3 cut(s) | 276, 485, 671 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1012 |
| MspA1I | CMGCKG | 3 cut(s) | 650, 710, 1081 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 109, 395, 653, 683, 710, 716, 719, 728 |
| NdeII | GATC | 3 cut(s) | 22, 478, 1096 |
| NlaIII | CATG | 2 cut(s) | 428, 685 |
| NlaIV | GGNNCC | 1 cut(s) | 328 |
| NmuCI | GTSAC | 2 cut(s) | 374, 977 |
| NspI | RCATGY | 1 cut(s) | 428 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 544 |
| PfeI | GAWTC | 2 cut(s) | 877, 1084 |
| PleI | GAGTC | 2 cut(s) | 868, 1011 |
| PpsI | GAGTC | 2 cut(s) | 868, 1011 |
| PsiI | TTATAA | 1 cut(s) | 11 |
| Psp1406I | AACGTT | 1 cut(s) | 538 |
| PspN4I | GGNNCC | 1 cut(s) | 328 |
| PspPI | GGNCC | 1 cut(s) | 237 |
| PstI | CTGCAG | 1 cut(s) | 645 |
| PstNI | CAGNNNCTG | 1 cut(s) | 40 |
| PsuI | RGATCY | 2 cut(s) | 22, 478 |
| PvuII | CAGCTG | 1 cut(s) | 710 |
| RsaI | GTAC | 2 cut(s) | 233, 911 |
| RsaNI | GTAC | 2 cut(s) | 232, 910 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1012 |
| SaqAI | TTAA | 3 cut(s) | 276, 485, 671 |
| Sau3AI | GATC | 3 cut(s) | 22, 478, 1096 |
| Sau96I | GGNCC | 1 cut(s) | 237 |
| SchI | GAGTC | 2 cut(s) | 869, 1012 |
| SduI | GDGCHC | 1 cut(s) | 508 |
| SfaNI | GCATC | 6 cut(s) | 67, 192, 403, 407, 508, 956 |
| SfcI | CTRYAG | 3 cut(s) | 346, 576, 641 |
| SinI | GGWCC | 1 cut(s) | 237 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1012 |
| Sse9I | AATT | 2 cut(s) | 668, 787 |
| SsiI | CCGC | 3 cut(s) | 362, 650, 1081 |
| SspMI | CTAG | 1 cut(s) | 221 |
| TaaI | ACNGT | 2 cut(s) | 231, 347 |
| TaiI | ACGT | 2 cut(s) | 541, 911 |
| TaqI | TCGA | 2 cut(s) | 547, 1101 |
| TasI | AATT | 2 cut(s) | 668, 787 |
| TatI | WGTACW | 1 cut(s) | 231 |
| TfiI | GAWTC | 2 cut(s) | 877, 1084 |
| Tru1I | TTAA | 3 cut(s) | 276, 485, 671 |
| Tru9I | TTAA | 3 cut(s) | 276, 485, 671 |
| TscAI | CASTG | 5 cut(s) | 157, 379, 774, 946, 1099 |
| TseFI | GTSAC | 2 cut(s) | 374, 977 |
| Tsp45I | GTSAC | 2 cut(s) | 374, 977 |
| TspDTI | ATGAA | 3 cut(s) | 44, 180, 677 |
| TspGWI | ACGGA | 2 cut(s) | 471, 868 |
| TspRI | CASTG | 5 cut(s) | 157, 379, 774, 946, 1099 |
| VpaK11BI | GGWCC | 1 cut(s) | 237 |
| XceI | RCATGY | 1 cut(s) | 428 |
| XspI | CTAG | 1 cut(s) | 221 |