No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g16741 FvH4_5g16750 |
| prunus_persica | Prupe.5G225600_v2.0.a1 |
| pyrus_communis | pycom06g19720 pycom06g19730 pycom14g19200 |
| rosa_chinensis | RchiOBHm_Chr7g0179341 |
| rosa_laevigata | RLG00000005364 |
| rosa_rugosa | Rorug06G0423600 Rorug06G0423700 |
| rosa_samantha | Rh7AG022900 Rh7AG023000 Rh7BG022500 Rh7BG022600 Rh7CG023800 Rh7CG023900 Rh7DG023200 Rh7DG023300 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccII | CGCG | 1 cut(s) | 149 |
| AciI | CCGC | 2 cut(s) | 112, 128 |
| AcsI | RAATTY | 1 cut(s) | 186 |
| AfaI | GTAC | 1 cut(s) | 92 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 72 |
| AflII | CTTAAG | 1 cut(s) | 173 |
| AflIII | ACRYGT | 1 cut(s) | 289 |
| AgsI | TTSAA | 3 cut(s) | 159, 241, 304 |
| AjiI | CACGTC | 1 cut(s) | 290 |
| Alw26I | GTCTC | 1 cut(s) | 23 |
| ApoI | RAATTY | 1 cut(s) | 186 |
| AspS9I | GGNCC | 1 cut(s) | 63 |
| AsuHPI | GGTGA | 1 cut(s) | 229 |
| AvaII | GGWCC | 1 cut(s) | 63 |
| BccI | CCATC | 1 cut(s) | 145 |
| BcoDI | GTCTC | 1 cut(s) | 23 |
| BfrI | CTTAAG | 1 cut(s) | 173 |
| Bme18I | GGWCC | 1 cut(s) | 63 |
| BmgBI | CACGTC | 1 cut(s) | 290 |
| BmgT120I | GGNCC | 1 cut(s) | 63 |
| BmsI | GCATC | 2 cut(s) | 192, 261 |
| BsaI | GGTCTC | 1 cut(s) | 23 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 91, 121 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 72 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BseMII | CTCAG | 1 cut(s) | 58 |
| BseRI | GAGGAG | 1 cut(s) | 112 |
| Bsh1236I | CGCG | 1 cut(s) | 149 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 72 |
| BsmAI | GTCTC | 1 cut(s) | 23 |
| Bso31I | GGTCTC | 1 cut(s) | 23 |
| BspACI | CCGC | 2 cut(s) | 112, 128 |
| BspCNI | CTCAG | 1 cut(s) | 57 |
| BspFNI | CGCG | 1 cut(s) | 149 |
| BspTI | CTTAAG | 1 cut(s) | 173 |
| BspTNI | GGTCTC | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 80 |
| BstAFI | CTTAAG | 1 cut(s) | 173 |
| BstDEI | CTNAG | 2 cut(s) | 44, 119 |
| BstFNI | CGCG | 1 cut(s) | 149 |
| BstMAI | GTCTC | 1 cut(s) | 23 |
| BstUI | CGCG | 1 cut(s) | 149 |
| BtgZI | GCGATG | 1 cut(s) | 164 |
| BtrI | CACGTC | 1 cut(s) | 290 |
| Cfr13I | GGNCC | 1 cut(s) | 63 |
| Csp6I | GTAC | 1 cut(s) | 91 |
| CviAII | CATG | 1 cut(s) | 82 |
| CviQI | GTAC | 1 cut(s) | 91 |
| DdeI | CTNAG | 2 cut(s) | 44, 119 |
| Eam1104I | CTCTTC | 1 cut(s) | 80 |
| EarI | CTCTTC | 1 cut(s) | 80 |
| Eco31I | GGTCTC | 1 cut(s) | 23 |
| Eco47I | GGWCC | 1 cut(s) | 63 |
| EcoO109I | RGGNCCY | 1 cut(s) | 63 |
| FaeI | CATG | 1 cut(s) | 85 |
| FaiI | YATR | 6 cut(s) | 12, 83, 261, 296, 314, 316 |
| FatI | CATG | 1 cut(s) | 81 |
| Hin1II | CATG | 1 cut(s) | 85 |
| HphI | GGTGA | 1 cut(s) | 229 |
| Hpy188I | TCNGA | 1 cut(s) | 47 |
| Hpy188III | TCNNGA | 1 cut(s) | 238 |
| Hpy99I | CGWCG | 1 cut(s) | 229 |
| HpyAV | CCTTC | 1 cut(s) | 96 |
| HpyCH4IV | ACGT | 2 cut(s) | 169, 289 |
| HpyCH4V | TGCA | 2 cut(s) | 58, 298 |
| HpyF3I | CTNAG | 2 cut(s) | 44, 119 |
| HpySE526I | ACGT | 2 cut(s) | 169, 289 |
| Hsp92II | CATG | 1 cut(s) | 85 |
| LpnPI | CCDG | 3 cut(s) | 58, 79, 270 |
| LweI | GCATC | 2 cut(s) | 192, 261 |
| MaeII | ACGT | 2 cut(s) | 169, 289 |
| MaeIII | GTNAC | 3 cut(s) | 107, 130, 193 |
| MboII | GAAGA | 1 cut(s) | 97 |
| MluCI | AATT | 1 cut(s) | 186 |
| MnlI | CCTC | 3 cut(s) | 54, 81, 90 |
| MseI | TTAA | 1 cut(s) | 174 |
| MspCI | CTTAAG | 1 cut(s) | 173 |
| MvnI | CGCG | 1 cut(s) | 149 |
| NlaIII | CATG | 1 cut(s) | 85 |
| NmuCI | GTSAC | 1 cut(s) | 193 |
| PpuMI | RGGWCCY | 1 cut(s) | 63 |
| Psp5II | RGGWCCY | 1 cut(s) | 63 |
| PspPI | GGNCC | 1 cut(s) | 63 |
| PspPPI | RGGWCCY | 1 cut(s) | 63 |
| RsaI | GTAC | 1 cut(s) | 92 |
| RsaNI | GTAC | 1 cut(s) | 91 |
| SaqAI | TTAA | 1 cut(s) | 174 |
| Sau96I | GGNCC | 1 cut(s) | 63 |
| SetI | ASST | 5 cut(s) | 68, 92, 172, 219, 292 |
| SfaNI | GCATC | 2 cut(s) | 192, 261 |
| SinI | GGWCC | 1 cut(s) | 63 |
| SmlI | CTYRAG | 1 cut(s) | 173 |
| SmoI | CTYRAG | 1 cut(s) | 173 |
| Sse9I | AATT | 1 cut(s) | 186 |
| SsiI | CCGC | 2 cut(s) | 112, 128 |
| TaiI | ACGT | 2 cut(s) | 172, 292 |
| TaqI | TCGA | 2 cut(s) | 190, 227 |
| TaqII | GACCGA | 1 cut(s) | 5 |
| TasI | AATT | 1 cut(s) | 186 |
| Tru1I | TTAA | 1 cut(s) | 174 |
| Tru9I | TTAA | 1 cut(s) | 174 |
| TseFI | GTSAC | 1 cut(s) | 193 |
| Tsp45I | GTSAC | 1 cut(s) | 193 |
| TspDTI | ATGAA | 2 cut(s) | 17, 98 |
| Vha464I | CTTAAG | 1 cut(s) | 173 |
| VpaK11BI | GGWCC | 1 cut(s) | 63 |
| XapI | RAATTY | 1 cut(s) | 186 |