Rh7BG022600

Lipid phosphate phosphatase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7B
OG0013678
Physical Location & Seq
Reverse (-)
1614196 .. 1614958
763 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7BG022600.1

Sequence Viewer

Length: 324 bp
ATGCAGGCATTTGCAGCATTCAAGATTCAGATGAGGAGGTCCCGGAGGAGGAGACGTTATCGTAGGCTAGGAAGTGTGGTTATTACTGAGGAAAATGCAGCAGCAGGAGGGAGAGGGACTCTAAAGTTTTGGAAAATTAGAGTGACCCCGAAACTGCGGCTCAAGGTTACAACATCATCGATGGCTGTTCTGAGGAGGCTTAGGAATGCTTATGTGGGAATGATGCTTTGTTTTGCTGGCCGTGTTGCTCAGTTGAATTCATGGCATGAATTTGGGCAACTTTCTGTAGCATTTAAGGTTAATTATGATGTTCCTACCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00561 ko00564 ko01110 map00561 map00564 map01110
Pfam Domains
Protein Families
PAP2

Protein Analysis

107

Amino Acids

12.37

Weight (kDa)

11.9

Isoelectric Point (pI)

58.72

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 322
AciI CCGC 1 cut(s) 157
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 2 cut(s) 256, 269
AfiI CCNNNNNNNGG 1 cut(s) 48
AgsI TTSAA 2 cut(s) 22, 256
Alw26I GTCTC 1 cut(s) 46
AoxI GGCC 1 cut(s) 238
ApeKI GCWGC 3 cut(s) 14, 98, 101
ApoI RAATTY 2 cut(s) 256, 269
AspS9I GGNCC 1 cut(s) 39
AsuC2I CCSGG 1 cut(s) 43
AvaII GGWCC 1 cut(s) 39
BbvI GCAGC 3 cut(s) 26, 110, 113
BccI CCATC 1 cut(s) 175
BceAI ACGGC 1 cut(s) 225
BcnI CCSGG 1 cut(s) 43
BcoDI GTCTC 1 cut(s) 46
BfaI CTAG 1 cut(s) 68
BfmI CTRYAG 1 cut(s) 285
BisI GCNGC 4 cut(s) 15, 99, 102, 158
BlsI GCNGC 4 cut(s) 16, 100, 103, 159
Bme1390I CCNGG 1 cut(s) 43
Bme18I GGWCC 1 cut(s) 39
BmgT120I GGNCC 1 cut(s) 39
BmiI GGNNCC 1 cut(s) 41
BmrFI CCNGG 1 cut(s) 43
BmsI GCATC 1 cut(s) 213
BplI GAGNNNNNCTC 2 cut(s) 103, 135
Bpu10I CCTNAGC 1 cut(s) 200
BpuEI CTTGAG 1 cut(s) 146
BpuMI CCSGG 1 cut(s) 43
Bsa29I ATCGAT 1 cut(s) 179
BsaXI ACNNNNNCTCC 2 cut(s) 40, 70
Bsc4I CCNNNNNNNGG 1 cut(s) 48
BseCI ATCGAT 1 cut(s) 179
BseLI CCNNNNNNNGG 1 cut(s) 48
BseMII CTCAG 3 cut(s) 78, 182, 263
BseRI GAGGAG 4 cut(s) 49, 61, 64, 208
BseXI GCAGC 3 cut(s) 26, 110, 113
BshFI GGCC 1 cut(s) 240
BshVI ATCGAT 1 cut(s) 179
BsiSI CCGG 1 cut(s) 43
BslFI GGGAC 2 cut(s) 25, 130
BslI CCNNNNNNNGG 1 cut(s) 48
BsmAI GTCTC 1 cut(s) 46
BsmBI CGTCTC 1 cut(s) 46
BsmFI GGGAC 2 cut(s) 25, 130
BsmI GAATGC 2 cut(s) 17, 211
BsnI GGCC 1 cut(s) 240
BspACI CCGC 1 cut(s) 157
BspANI GGCC 1 cut(s) 240
BspCNI CTCAG 3 cut(s) 79, 183, 262
BspDI ATCGAT 1 cut(s) 179
BspLI GGNNCC 1 cut(s) 41
BstC8I GCNNGC 2 cut(s) 6, 238
BstDEI CTNAG 4 cut(s) 87, 191, 200, 249
BstMAI GTCTC 1 cut(s) 46
BstMWI GCNNNNNNNGC 1 cut(s) 14
BstSCI CCNGG 1 cut(s) 41
BstSFI CTRYAG 1 cut(s) 285
BstV1I GCAGC 3 cut(s) 26, 110, 113
Bsu15I ATCGAT 1 cut(s) 179
BsuRI GGCC 1 cut(s) 240
BsuTUI ATCGAT 1 cut(s) 179
Cac8I GCNNGC 2 cut(s) 6, 238
Cfr13I GGNCC 1 cut(s) 39
ClaI ATCGAT 1 cut(s) 179
CviAII CATG 2 cut(s) 261, 266
CviJI RGCY 5 cut(s) 67, 160, 185, 199, 240
CviKI_1 RGCY 5 cut(s) 67, 160, 185, 199, 240
DdeI CTNAG 4 cut(s) 87, 191, 200, 249
EaeI YGGCCR 1 cut(s) 238
Eco47I GGWCC 1 cut(s) 39
EcoO109I RGGNCCY 1 cut(s) 39
EcoRI GAATTC 1 cut(s) 256
Esp3I CGTCTC 1 cut(s) 46
FaeI CATG 2 cut(s) 264, 269
FaiI YATR 5 cut(s) 213, 262, 267, 306, 322
FaqI GGGAC 2 cut(s) 25, 130
FatI CATG 2 cut(s) 260, 265
Fnu4HI GCNGC 4 cut(s) 15, 99, 102, 158
Fsp4HI GCNGC 4 cut(s) 15, 99, 102, 158
FspBI CTAG 1 cut(s) 68
GluI GCNGC 4 cut(s) 15, 99, 102, 158
HaeIII GGCC 1 cut(s) 240
HapII CCGG 1 cut(s) 43
Hin1II CATG 2 cut(s) 264, 269
HinfI GANTC 2 cut(s) 25, 118
HpaII CCGG 1 cut(s) 43
Hpy188I TCNGA 2 cut(s) 30, 192
Hpy188III TCNNGA 1 cut(s) 22
HpyCH4IV ACGT 1 cut(s) 55
HpyCH4V TGCA 3 cut(s) 4, 14, 98
HpyF10VI GCNNNNNNNGC 1 cut(s) 14
HpyF3I CTNAG 4 cut(s) 87, 191, 200, 249
HpySE526I ACGT 1 cut(s) 55
Hsp92II CATG 2 cut(s) 264, 269
LpnPI CCDG 3 cut(s) 56, 90, 222
Lsp1109I GCAGC 3 cut(s) 26, 110, 113
LweI GCATC 1 cut(s) 213
MaeI CTAG 1 cut(s) 68
MaeII ACGT 1 cut(s) 55
MaeIII GTNAC 2 cut(s) 142, 166
MluCI AATT 4 cut(s) 135, 256, 269, 301
MlyI GAGTC 1 cut(s) 112
MnlI CCTC 9 cut(s) 27, 30, 39, 42, 82, 101, 107, 186, 189
MseI TTAA 2 cut(s) 294, 300
MspI CCGG 1 cut(s) 43
MspR9I CCNGG 1 cut(s) 43
Mva1269I GAATGC 2 cut(s) 17, 211
MwoI GCNNNNNNNGC 1 cut(s) 14
NciI CCSGG 1 cut(s) 43
NlaIII CATG 2 cut(s) 264, 269
NlaIV GGNNCC 1 cut(s) 41
NmuCI GTSAC 1 cut(s) 142
PctI GAATGC 2 cut(s) 17, 211
PfeI GAWTC 1 cut(s) 25
PfoI TCCNGGA 1 cut(s) 41
PkrI GCNGC 4 cut(s) 16, 100, 103, 159
PleI GAGTC 1 cut(s) 112
PpsI GAGTC 1 cut(s) 112
PpuMI RGGWCCY 1 cut(s) 39
PsiI TTATAA 1 cut(s) 322
Psp5II RGGWCCY 1 cut(s) 39
PspN4I GGNNCC 1 cut(s) 41
PspPI GGNCC 1 cut(s) 39
PspPPI RGGWCCY 1 cut(s) 39
SaqAI TTAA 2 cut(s) 294, 300
SatI GCNGC 4 cut(s) 15, 99, 102, 158
Sau96I GGNCC 1 cut(s) 39
SchI GAGTC 1 cut(s) 112
ScrFI CCNGG 1 cut(s) 43
SetI ASST 5 cut(s) 41, 58, 168, 300, 320
SfaNI GCATC 1 cut(s) 213
SfcI CTRYAG 1 cut(s) 285
SinI GGWCC 1 cut(s) 39
SmlI CTYRAG 1 cut(s) 161
SmoI CTYRAG 1 cut(s) 161
Sse9I AATT 4 cut(s) 135, 256, 269, 301
SsiI CCGC 1 cut(s) 157
SspMI CTAG 1 cut(s) 68
StyD4I CCNGG 1 cut(s) 41
TaiI ACGT 1 cut(s) 58
TaqI TCGA 1 cut(s) 179
TasI AATT 4 cut(s) 135, 256, 269, 301
TauI GCSGC 1 cut(s) 160
TfiI GAWTC 1 cut(s) 25
Tru1I TTAA 2 cut(s) 294, 300
Tru9I TTAA 2 cut(s) 294, 300
TseFI GTSAC 1 cut(s) 142
TseI GCWGC 3 cut(s) 14, 98, 101
Tsp45I GTSAC 1 cut(s) 142
TspDTI ATGAA 2 cut(s) 249, 282
VpaK11BI GGWCC 1 cut(s) 39
XapI RAATTY 2 cut(s) 256, 269
XspI CTAG 1 cut(s) 68
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.