Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0007000

Physical Location & Seq

Genomic Coordinates Reverse (-)

56181709 .. 56185471

Gene Structure 3763 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0423700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2379 bp

ATGGAGACCTTGAAACACTTGGCCATTGGCTTCTACACCCCAAGACTCTCCGCCCCTTTCCCACACTCAAGAAGAAAACCCCAAAAGCTCAGGCCCGCATTATGCTCCGCCAGCAAATGGGCCGACCGCCTCCTCGCCGACTTCCAATTCCTCGGCGACTCCTCCTCAGACCACCATTCCACCACGGCCACTCTCGCTCCTCCTCCTCCTCCTCCTCCCCCACTCGCTCCTCCCGAGCGCCACGTGTCCATCCCCCTCGACTTCTACCAGGCACTCGGCACCCAGTCGCATTTCCTCGGCGACGGGATTAGGCGAGCTTACGAGGCTAGGGCTTCGAAGCCGCCTCAGTACGGGTTCACCCAAGACGCTTTGGTCAGCCGGAGACAGATTCTCCAGGCCGCCTGCGAAACCCTAGCCGACCCTACCTCCAGAAGAGAGTACAATCAGTCCCTCGTTGAAGACGAAGACGGAACAATTCTTACCGACGTTCCTTTTGATAAGGTTCCTGGAGCTCTTTGTGTGTTGCAAGAAGCTGGAAAGACGGAGCTGGTTCTTCAAATTGGGCAGAGTTTGCTGAGGGAGAGGCTGCCGAAATCGTTCAAGCAAGATGTGGTTTTGGTGATGGCACTTGCTTATGTCGACATGTCGAGGGACGCAATGGCATTGTCCCCACCGGATTTTATTCAGGGTTGTGAAGTGCTCGAGAGGGCTTTGAAGCTCTTGCAGGAGGAAGGTGCTAGCAGCCTTGCACCTGATCTTCAAGCACAAATTGACGAGACACTGGAAGAGATCACCCCACGTTGCATTTTGGAACTTCTAGGTTTACCCCTTGATGAGGAGTACCAATCAAGAAGGGAAGAGGGCCTCCGTGGTGTCCGCAACATATTGTGGTCTGTTGGAGGAGGCGGAGCAGTTGCTCTTGCTGGGGGATTCACCCGTGACAGTTTCCTGAACGAGGTCTTTTTACGAATGACTGCAGCTGAACAGGTGGAACTATACGTATCAACACCAAAAAACATCCCAGCCGAAAGCTTTGAAGTTTATGGAGTGGCGCTTGCGCTTGTTGCTCAAGCCTTTGTTGGTAAAAAACCTAATCACATTCAAGATGCTGATAACCTGTTCTGGGAACTTCAGCAGAATAAGGTATCAGCTGTAGGACACTCTGTTAACACCTATATAACCAATGAAAATAGTGAGATAGACTTTGCTTTGGAGAGGGGACTCTGTTCACTTCTTCTGGGGGATCTTGATGAGTGTCGCTCATGGTTGGGCCTAGACAATAATAATTCACCGTATAGAAATCCATCTGTAGTCGATTTTGTCTTGGAGAATGCTAAGGATGATGATGACAATGATCTTCCCGGACTTTGTAAGCTGTTGGAGACATGGTTGATGGAGGTGGTATTCCCCAGATTTAGAGACACCAAAGATATTGAGTTCAGCCTTGGTGATTATTATGATGATCCTACAGTCTTGAGATACTTAGAAAGGCTGGATGGAACTAATGGCTCACCCTTAGCTGCAGCAGCAGCCATAGTAAGGATCGGTGCTGAAGCTACTGCAGTTCTTGATAATGTCAAGGCCAGTGCAATTCAGGCCCTGTGGAAGGTGTTTCCTCTGGGTCAAAGAGATAAGAATATGACACCTCAAGAAGATCATGAGGTGAATTATTCTCTTCTTCCTGAAGACAGTGGAGACCCTTTGGAAGAATCCTATGAAGATGATTCTATTCGTGTTGCTGAGGTTTCTGGAAGAGATGGTTCTGTTGATACACTTAAAGAAGAATCAATTACTGAGCAAATCAAAGATGCAAGTGTGAAGATTATGTGTGCTGGTGTGGTAATTGGACTACTGACTTTTGTTGGATTGAAGTATTTACCCGGCAGGAATAGCTCATCCAATCTACGTAAAGAACTTAGTTCAGTGACTGCATCTGATGTCACTAGTTCAGGGTTACCAGTAGATGTTAAGTCTGCAGAGGAATTACCCAAAATGGACGCACAAATTGCCGAAGGTCTAGTTCGGAAATGGCAGAACATAAAATCTCAGGCTTTTGGACCTGGGCATTCCGTGGATAAATTGTCAGAGGTATTGGATGGTGAGATGTTGAAGATATGGACAGATCGTGCAACTGAAATTGCACAGTTAAATTGGTCCTATGATTACACCCTTTTGAACTTGAGCATTGACAGTGTAACAGTGTCGCTAGATGGGCAGCGTGCTGTGGTGGAAGCAACTCTTGAAGAATTAGCCCAATTAACTGATGTGCTCCATCCAGAGCACGATGCCTCGAATAGCAGAACATACACTACAAGATATGAGATGTCTTGTTCAAGCTCAGGATGGAAAATCACTGAAGGAGCTGTCCTCCAATCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

ko00561 ko00564 ko01110 map00561 map00564 map01110

Pfam Domains

Protein Families

PAP2

Protein Analysis

792

Amino Acids

87.31

Weight (kDa)

4.67

Isoelectric Point (pI)

47.52

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Arm_PDR	PF25515	162 - 303	5e-52	Plastid division regulator ARM repeat
ARC6	PF23468	323 - 517	4.2e-90	Plastid division regulator alpha solenoid domain
ARC6-like_IMS	PF13355	670 - 785	1.4e-33	ARC6-like, IMS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007000)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18220
fragaria_vesca	FvH4_5g16740 FvH4_5g16740 FvH4_5g16740 FvH4_5g16740 FvH4_5g16740 FvH4_5g16740
malus_domestica	MD06G1221300.v1.1 MD14G1230500.v1.1
prunus_persica	Prupe.5G225500_v2.0.a1 Prupe.5G225500_v2.0.a1 Prupe.5G225500_v2.0.a1
pyrus_communis	pycom14g19180
rosa_chinensis	RchiOBHm_Chr7g0179351
rosa_laevigata	RLG00000005363
rosa_multiflora	Rmu_co8515879.1_g000001 Rmu_sc0000236.1_g000048 Rmu_sc0019996.1_g000007
rosa_roxburghii	Rroxscaffold_3G00274100
rosa_rugosa	Rorug06G0423700
rosa_samantha	Rh7AG023100 Rh7BG022700 Rh7CG024000 Rh7DG023400
rosa_wichuraiana	Rw7G001860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	371
AccB1I	GGYRCC	1 cut(s)	278
AccB7I	CCANNNNNTGG	1 cut(s)	117
AccI	GTMKAC	1 cut(s)	639
AciI	CCGC	8 cut(s)	51, 96, 108, 127, 341, 399, 877, 906
AclWI	GGATC	3 cut(s)	1251, 1457, 1550
AcoI	YGGCCR	2 cut(s)	21, 186
AcuI	CTGAAG	4 cut(s)	1115, 1572, 1704, 2376
AcvI	CACGTG	1 cut(s)	244
AfaI	GTAC	3 cut(s)	350, 440, 842
AfiI	CCNNNNNNNGG	7 cut(s)	117, 350, 835, 955, 1123, 1539, 1606
AflIII	ACRYGT	2 cut(s)	243, 642
AhlI	ACTAGT	1 cut(s)	1943
AjnI	CCWGG	4 cut(s)	267, 393, 505, 2059
Alw21I	GWGCWC	4 cut(s)	514, 702, 2271, 2283
Alw26I	GTCTC	5 cut(s)	376, 770, 1376, 1413, 1689
AlwI	GGATC	3 cut(s)	1251, 1457, 1550
AlwNI	CAGNNNCTG	2 cut(s)	1600, 1928
Ama87I	CYCGRG	2 cut(s)	233, 701
AoxI	GGCC	9 cut(s)	21, 92, 120, 186, 396, 862, 1270, 1581, 1596
ApeKI	GCWGC	8 cut(s)	586, 741, 977, 1520, 1523, 1526, 1529, 2215
ArsI	GACNNNNNNTTYG	2 cut(s)	476, 508
Asp700I	GAANNNNTTC	1 cut(s)	596
AspLEI	GCGC	3 cut(s)	240, 1054, 1060
AspS9I	GGNCC	7 cut(s)	93, 120, 862, 1270, 1597, 2057, 2154
AsuC2I	CCSGG	2 cut(s)	1362, 1881
AsuHPI	GGTGA	9 cut(s)	349, 631, 784, 925, 1281, 1460, 1503, 1675, 2111
AsuII	TTCGAA	1 cut(s)	335
AsuNHI	GCTAGC	1 cut(s)	737
AvaI	CYCGRG	2 cut(s)	233, 701
AvaII	GGWCC	2 cut(s)	2057, 2154
BalI	TGGCCA	1 cut(s)	23
BanI	GGYRCC	1 cut(s)	278
BanII	GRGCYC	1 cut(s)	514
BbrPI	CACGTG	1 cut(s)	244
BbsI	GAAGAC	3 cut(s)	465, 471, 1692
Bbv12I	GWGCWC	4 cut(s)	514, 702, 2271, 2283
BbvCI	CCTCAGC	2 cut(s)	575, 1740
BbvI	GCAGC	8 cut(s)	573, 753, 989, 1507, 1535, 1538, 1541, 2227
BceAI	ACGGC	1 cut(s)	201
BciT130I	CCWGG	4 cut(s)	269, 395, 507, 2061
BcnI	CCSGG	2 cut(s)	1362, 1881
BcoDI	GTCTC	5 cut(s)	376, 770, 1376, 1413, 1689
BcuI	ACTAGT	1 cut(s)	1943
BfaI	CTAG	8 cut(s)	327, 413, 738, 818, 1274, 1944, 2018, 2207
BfmI	CTRYAG	7 cut(s)	975, 1152, 1308, 1467, 1521, 1560, 1974
BfoI	RGCGCY	2 cut(s)	241, 1055
Bme1390I	CCNGG	6 cut(s)	269, 395, 507, 1362, 1881, 2061
Bme18I	GGWCC	2 cut(s)	2057, 2154
BmeT110I	CYCGRG	2 cut(s)	233, 701
BmgT120I	GGNCC	7 cut(s)	93, 120, 862, 1270, 1597, 2057, 2154
BmiI	GGNNCC	2 cut(s)	280, 504
BmrFI	CCNGG	6 cut(s)	269, 395, 507, 1362, 1881, 2061
BmrI	ACTGGG	1 cut(s)	277
BmsI	GCATC	4 cut(s)	1096, 1798, 1940, 2275
BmtI	GCTAGC	1 cut(s)	741
BmuI	ACTGGG	1 cut(s)	277
BpiI	GAAGAC	3 cut(s)	465, 471, 1692
BplI	GAGNNNNNCTC	3 cut(s)	1244, 1276, 2352
BpmI	CTGGAG	3 cut(s)	377, 412, 528
Bpu10I	CCTNAGC	6 cut(s)	89, 575, 1335, 1516, 1740, 2338
Bpu14I	TTCGAA	1 cut(s)	335
BpuEI	CTTGAG	5 cut(s)	52, 1053, 1495, 1632, 2200
BpuMI	CCSGG	2 cut(s)	1362, 1881
BsaAI	YACGTR	3 cut(s)	244, 1000, 1907
BsaI	GGTCTC	1 cut(s)	1689
BsaJI	CCNNGG	7 cut(s)	151, 183, 295, 868, 1444, 2060, 2070
BsaWI	WCCGGW	1 cut(s)	673
BsaXI	ACNNNNNCTCC	8 cut(s)	181, 211, 375, 405, 410, 440, 1373, 1403
Bsc4I	CCNNNNNNNGG	7 cut(s)	117, 350, 835, 955, 1123, 1539, 1606
Bse1I	ACTGG	4 cut(s)	283, 786, 1584, 1958
Bse3DI	GCAATG	1 cut(s)	663
BseBI	CCWGG	4 cut(s)	269, 395, 507, 2061
BseDI	CCNNGG	7 cut(s)	151, 183, 295, 868, 1444, 2060, 2070
BseGI	GGATG	8 cut(s)	249, 1017, 1345, 1501, 1895, 2101, 2272, 2348
BseLI	CCNNNNNNNGG	7 cut(s)	117, 350, 835, 955, 1123, 1539, 1606
BseMI	GCAATG	1 cut(s)	663
BseMII	CTCAG	8 cut(s)	103, 180, 359, 566, 1731, 1785, 2060, 2352
BseNI	ACTGG	4 cut(s)	283, 786, 1584, 1958
BseXI	GCAGC	8 cut(s)	573, 753, 989, 1507, 1535, 1538, 1541, 2227
BseYI	CCCAGC	2 cut(s)	923, 1021
Bsh1285I	CGRYCG	1 cut(s)	127
BshFI	GGCC	9 cut(s)	23, 94, 122, 188, 398, 864, 1272, 1583, 1598
BshNI	GGYRCC	1 cut(s)	278
BsiEI	CGRYCG	1 cut(s)	127
BsiHKAI	GWGCWC	4 cut(s)	514, 702, 2271, 2283
BsiHKCI	CYCGRG	2 cut(s)	233, 701
BsiSI	CCGG	4 cut(s)	379, 674, 1362, 1881
BslFI	GGGAC	4 cut(s)	433, 652, 665, 1233
BslI	CCNNNNNNNGG	7 cut(s)	117, 350, 835, 955, 1123, 1539, 1606
BsmAI	GTCTC	5 cut(s)	376, 770, 1376, 1413, 1689
BsmFI	GGGAC	4 cut(s)	433, 652, 665, 1233
BsmI	GAATGC	2 cut(s)	1336, 2065
BsnI	GGCC	9 cut(s)	23, 94, 122, 188, 398, 864, 1272, 1583, 1598
Bso31I	GGTCTC	1 cut(s)	1689
BsoBI	CYCGRG	2 cut(s)	233, 701
Bsp119I	TTCGAA	1 cut(s)	335
Bsp1286I	GDGCHC	4 cut(s)	514, 702, 2271, 2283
Bsp143I	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
BspACI	CCGC	8 cut(s)	51, 96, 108, 127, 341, 399, 877, 906
BspANI	GGCC	9 cut(s)	23, 94, 122, 188, 398, 864, 1272, 1583, 1598
BspCNI	CTCAG	8 cut(s)	102, 179, 358, 567, 1732, 1786, 2059, 2351
BspHI	TCATGA	2 cut(s)	1657, 2375
BspLI	GGNNCC	2 cut(s)	280, 504
BspMAI	CTGCAG	4 cut(s)	979, 1525, 1564, 1978
BspOI	GCTAGC	1 cut(s)	741
BspPI	GGATC	3 cut(s)	1251, 1457, 1550
BspT104I	TTCGAA	1 cut(s)	335
BspT107I	GGYRCC	1 cut(s)	278
BspTNI	GGTCTC	1 cut(s)	1689
BsrDI	GCAATG	1 cut(s)	663
BsrI	ACTGG	4 cut(s)	283, 786, 1584, 1958
BssECI	CCNNGG	7 cut(s)	151, 183, 295, 868, 1444, 2060, 2070
BssMI	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
BssT1I	CCWWGG	1 cut(s)	1444
Bst2UI	CCWGG	4 cut(s)	269, 395, 507, 2061
Bst4CI	ACNGT	7 cut(s)	944, 1293, 1471, 1691, 2145, 2192, 2200
Bst6I	CTCTTC	5 cut(s)	427, 780, 852, 1680, 1747
BstAPI	GCANNNNNTGC	2 cut(s)	571, 2006
BstBAI	YACGTR	3 cut(s)	244, 1000, 1907
BstBI	TTCGAA	1 cut(s)	335
BstC8I	GCNNGC	7 cut(s)	96, 112, 315, 403, 739, 1056, 2220
BstDSI	CCRYGG	3 cut(s)	183, 868, 2070
BstEII	GGTNACC	1 cut(s)	1953
BstENI	CCTNNNNNAGG	3 cut(s)	833, 953, 1604
BstF5I	GGATG	8 cut(s)	249, 1017, 1345, 1501, 1895, 2101, 2272, 2348
BstH2I	RGCGCY	2 cut(s)	241, 1055
BstHHI	GCGC	3 cut(s)	240, 1054, 1060
BstKTI	GATC	8 cut(s)	757, 792, 1246, 1357, 1465, 1545, 1657, 2125
BstMAI	GTCTC	5 cut(s)	376, 770, 1376, 1413, 1689
BstMBI	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
BstMCI	CGRYCG	1 cut(s)	127
BstNI	CCWGG	4 cut(s)	269, 395, 507, 2061
BstNSI	RCATGY	1 cut(s)	646
BstPI	GGTNACC	1 cut(s)	1953
BstSCI	CCNGG	6 cut(s)	267, 393, 505, 1360, 1879, 2059
BstSFI	CTRYAG	7 cut(s)	975, 1152, 1308, 1467, 1521, 1560, 1974
BstSNI	TACGTA	2 cut(s)	1000, 1907
BstV1I	GCAGC	8 cut(s)	573, 753, 989, 1507, 1535, 1538, 1541, 2227
BstV2I	GAAGAC	3 cut(s)	465, 471, 1692
BstX2I	RGATCY	1 cut(s)	1243
BstYI	RGATCY	1 cut(s)	1243
BsuRI	GGCC	9 cut(s)	23, 94, 122, 188, 398, 864, 1272, 1583, 1598
BtgI	CCRYGG	3 cut(s)	183, 868, 2070
BtsCI	GGATG	8 cut(s)	249, 1017, 1345, 1501, 1895, 2101, 2272, 2348
BtsIMutI	CAGTG	7 cut(s)	779, 1591, 1696, 1929, 2197, 2205, 2352
Cac8I	GCNNGC	7 cut(s)	96, 112, 315, 403, 739, 1056, 2220
CaiI	CAGNNNCTG	2 cut(s)	1600, 1928
CciI	TCATGA	2 cut(s)	1657, 2375
CfoI	GCGC	3 cut(s)	240, 1054, 1060
Cfr13I	GGNCC	7 cut(s)	93, 120, 862, 1270, 1597, 2057, 2154
CseI	GACGC	3 cut(s)	374, 662, 2006
Csp6I	GTAC	3 cut(s)	349, 439, 841
CviAII	CATG	5 cut(s)	643, 1263, 1386, 1658, 2376
CviQI	GTAC	3 cut(s)	349, 439, 841
DpnI	GATC	8 cut(s)	756, 791, 1245, 1356, 1464, 1544, 1656, 2124
DpnII	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
DrdI	GACNNNNNNGTC	1 cut(s)	371
DseDI	GACNNNNNNGTC	1 cut(s)	371
EaeI	YGGCCR	2 cut(s)	21, 186
Eam1104I	CTCTTC	5 cut(s)	427, 780, 852, 1680, 1747
EarI	CTCTTC	5 cut(s)	427, 780, 852, 1680, 1747
EciI	GGCGGA	3 cut(s)	40, 97, 921
Ecl136II	GAGCTC	1 cut(s)	512
Eco105I	TACGTA	2 cut(s)	1000, 1907
Eco130I	CCWWGG	1 cut(s)	1444
Eco24I	GRGCYC	1 cut(s)	514
Eco31I	GGTCTC	1 cut(s)	1689
Eco47I	GGWCC	2 cut(s)	2057, 2154
Eco53kI	GAGCTC	1 cut(s)	512
Eco57I	CTGAAG	4 cut(s)	1115, 1572, 1704, 2376
Eco72I	CACGTG	1 cut(s)	244
Eco88I	CYCGRG	2 cut(s)	233, 701
Eco91I	GGTNACC	1 cut(s)	1953
EcoICRI	GAGCTC	1 cut(s)	512
EcoNI	CCTNNNNNAGG	3 cut(s)	833, 953, 1604
EcoO109I	RGGNCCY	2 cut(s)	862, 1597
EcoO65I	GGTNACC	1 cut(s)	1953
EcoRII	CCWGG	4 cut(s)	267, 393, 505, 2059
EcoT14I	CCWWGG	1 cut(s)	1444
EcoT38I	GRGCYC	1 cut(s)	514
ErhI	CCWWGG	1 cut(s)	1444
FaeI	CATG	5 cut(s)	646, 1266, 1389, 1661, 2379
FalI	AAGNNNNNCTT	2 cut(s)	2223, 2255
FaqI	GGGAC	4 cut(s)	433, 652, 665, 1233
FatI	CATG	5 cut(s)	642, 1262, 1385, 1657, 2375
FauI	CCCGC	1 cut(s)	103
FblI	GTMKAC	1 cut(s)	639
FokI	GGATG	8 cut(s)	236, 1004, 1352, 1508, 1882, 2108, 2259, 2355
FriOI	GRGCYC	1 cut(s)	514
FspBI	CTAG	8 cut(s)	327, 413, 738, 818, 1274, 1944, 2018, 2207
GlaI	GCGC	3 cut(s)	239, 1053, 1059
GsaI	CCCAGC	2 cut(s)	927, 1025
GsuI	CTGGAG	3 cut(s)	377, 412, 528
HaeII	RGCGCY	2 cut(s)	241, 1055
HaeIII	GGCC	9 cut(s)	23, 94, 122, 188, 398, 864, 1272, 1583, 1598
HapII	CCGG	4 cut(s)	379, 674, 1362, 1881
HgaI	GACGC	3 cut(s)	374, 662, 2006
HhaI	GCGC	3 cut(s)	240, 1054, 1060
Hin1II	CATG	5 cut(s)	646, 1266, 1389, 1661, 2379
Hin6I	GCGC	3 cut(s)	238, 1052, 1058
HinP1I	GCGC	3 cut(s)	238, 1052, 1058
HincII	GTYRAC	2 cut(s)	640, 1168
HindII	GTYRAC	2 cut(s)	640, 1168
HindIII	AAGCTT	1 cut(s)	1030
HinfI	GANTC	8 cut(s)	45, 158, 388, 930, 1221, 1709, 1724, 1784
HpaI	GTTAAC	1 cut(s)	1168
HpaII	CCGG	4 cut(s)	379, 674, 1362, 1881
HphI	GGTGA	9 cut(s)	349, 631, 784, 925, 1281, 1460, 1503, 1675, 2111
Hpy166II	GTNNAC	5 cut(s)	357, 640, 824, 1168, 1229
Hpy188I	TCNGA	4 cut(s)	169, 1936, 2025, 2086
Hpy8I	GTNNAC	5 cut(s)	357, 640, 824, 1168, 1229
Hpy99I	CGWCG	2 cut(s)	305, 488
HpyAV	CCTTC	5 cut(s)	725, 846, 1600, 2006, 2351
HpyCH4III	ACNGT	7 cut(s)	944, 1293, 1471, 1691, 2145, 2192, 2200
HpyCH4IV	ACGT	5 cut(s)	243, 486, 799, 999, 1906
HpySE526I	ACGT	5 cut(s)	243, 486, 799, 999, 1906
Hsp92II	CATG	5 cut(s)	646, 1266, 1389, 1661, 2379
HspAI	GCGC	3 cut(s)	238, 1052, 1058
KspAI	GTTAAC	1 cut(s)	1168
Kzo9I	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
LmnI	GCTCC	8 cut(s)	110, 202, 232, 509, 544, 908, 2274, 2360
Lsp1109I	GCAGC	8 cut(s)	573, 753, 989, 1507, 1535, 1538, 1541, 2227
LweI	GCATC	4 cut(s)	1096, 1798, 1940, 2275
MaeI	CTAG	8 cut(s)	327, 413, 738, 818, 1274, 1944, 2018, 2207
MaeII	ACGT	5 cut(s)	243, 486, 799, 999, 1906
MaeIII	GTNAC	5 cut(s)	938, 1924, 1939, 1953, 2194
MalI	GATC	8 cut(s)	756, 791, 1245, 1356, 1464, 1544, 1656, 2124
MboI	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
MflI	RGATCY	1 cut(s)	1243
MhlI	GDGCHC	4 cut(s)	514, 702, 2271, 2283
MlsI	TGGCCA	1 cut(s)	23
MluNI	TGGCCA	1 cut(s)	23
MlyI	GAGTC	3 cut(s)	39, 152, 1215
MmeI	TCCRAC	3 cut(s)	877, 1359, 1843
Mox20I	TGGCCA	1 cut(s)	23
MroXI	GAANNNNTTC	1 cut(s)	596
MscI	TGGCCA	1 cut(s)	23
MseI	TTAA	5 cut(s)	1167, 1776, 1968, 2147, 2258
Msp20I	TGGCCA	1 cut(s)	23
MspA1I	CMGCKG	2 cut(s)	980, 1151
MspI	CCGG	4 cut(s)	379, 674, 1362, 1881
MspR9I	CCNGG	6 cut(s)	269, 395, 507, 1362, 1881, 2061
Mva1269I	GAATGC	2 cut(s)	1336, 2065
MvaI	CCWGG	4 cut(s)	269, 395, 507, 2061
NciI	CCSGG	2 cut(s)	1362, 1881
NdeII	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
NheI	GCTAGC	1 cut(s)	737
NlaIII	CATG	5 cut(s)	646, 1266, 1389, 1661, 2379
NlaIV	GGNNCC	2 cut(s)	280, 504
NmeAIII	GCCGAG	3 cut(s)	132, 255, 276
NmuCI	GTSAC	3 cut(s)	938, 1924, 1939
NspI	RCATGY	1 cut(s)	646
NspV	TTCGAA	1 cut(s)	335
PaeR7I	CTCGAG	1 cut(s)	701
PagI	TCATGA	2 cut(s)	1657, 2375
PciI	ACATGT	1 cut(s)	642
PcsI	WCGNNNNNNNCGW	2 cut(s)	231, 459
PctI	GAATGC	2 cut(s)	1336, 2065
PdmI	GAANNNNTTC	1 cut(s)	596
PfeI	GAWTC	5 cut(s)	388, 930, 1709, 1724, 1784
PflMI	CCANNNNNTGG	1 cut(s)	117
PfoI	TCCNGGA	2 cut(s)	505, 1360
PleI	GAGTC	3 cut(s)	39, 152, 1215
PmaCI	CACGTG	1 cut(s)	244
PmlI	CACGTG	1 cut(s)	244
PpsI	GAGTC	3 cut(s)	39, 152, 1215
Ppu21I	YACGTR	3 cut(s)	244, 1000, 1907
PscI	ACATGT	1 cut(s)	642
Psp124BI	GAGCTC	1 cut(s)	514
Psp6I	CCWGG	4 cut(s)	267, 393, 505, 2059
PspCI	CACGTG	1 cut(s)	244
PspEI	GGTNACC	1 cut(s)	1953
PspFI	CCCAGC	2 cut(s)	923, 1021
PspGI	CCWGG	4 cut(s)	267, 393, 505, 2059
PspN4I	GGNNCC	2 cut(s)	280, 504
PspPI	GGNCC	7 cut(s)	93, 120, 862, 1270, 1597, 2057, 2154
PsrI	GAACNNNNNNTAC	4 cut(s)	463, 495, 2293, 2325
PstI	CTGCAG	4 cut(s)	979, 1525, 1564, 1978
PstNI	CAGNNNCTG	2 cut(s)	1600, 1928
PsuI	RGATCY	1 cut(s)	1243
PvuII	CAGCTG	2 cut(s)	980, 1151
RsaI	GTAC	3 cut(s)	350, 440, 842
RsaNI	GTAC	3 cut(s)	349, 439, 841
SacI	GAGCTC	1 cut(s)	514
SalI	GTCGAC	1 cut(s)	638
SaqAI	TTAA	5 cut(s)	1167, 1776, 1968, 2147, 2258
Sau3AI	GATC	8 cut(s)	754, 789, 1243, 1354, 1462, 1542, 1654, 2122
Sau96I	GGNCC	7 cut(s)	93, 120, 862, 1270, 1597, 2057, 2154
SchI	GAGTC	3 cut(s)	39, 152, 1215
ScrFI	CCNGG	6 cut(s)	269, 395, 507, 1362, 1881, 2061
SduI	GDGCHC	4 cut(s)	514, 702, 2271, 2283
SfaNI	GCATC	4 cut(s)	1096, 1798, 1940, 2275
SfcI	CTRYAG	7 cut(s)	975, 1152, 1308, 1467, 1521, 1560, 1974
Sfr274I	CTCGAG	1 cut(s)	701
SfuI	TTCGAA	1 cut(s)	335
SinI	GGWCC	2 cut(s)	2057, 2154
SlaI	CTCGAG	1 cut(s)	701
SmlI	CTYRAG	6 cut(s)	67, 701, 1068, 1474, 1647, 2179
SmoI	CTYRAG	6 cut(s)	67, 701, 1068, 1474, 1647, 2179
SnaBI	TACGTA	2 cut(s)	1000, 1907
SpeI	ACTAGT	1 cut(s)	1943
SsiI	CCGC	8 cut(s)	51, 96, 108, 127, 341, 399, 877, 906
SspMI	CTAG	8 cut(s)	327, 413, 738, 818, 1274, 1944, 2018, 2207
SstI	GAGCTC	1 cut(s)	514
StyD4I	CCNGG	6 cut(s)	267, 393, 505, 1360, 1879, 2059
StyI	CCWWGG	1 cut(s)	1444
TaaI	ACNGT	7 cut(s)	944, 1293, 1471, 1691, 2145, 2192, 2200
TaiI	ACGT	5 cut(s)	246, 489, 802, 1002, 1909
TaqI	TCGA	7 cut(s)	258, 335, 639, 647, 702, 1314, 2291
TatI	WGTACW	1 cut(s)	438
TauI	GCSGC	2 cut(s)	343, 401
TfiI	GAWTC	5 cut(s)	388, 930, 1709, 1724, 1784
Tru1I	TTAA	5 cut(s)	1167, 1776, 1968, 2147, 2258
Tru9I	TTAA	5 cut(s)	1167, 1776, 1968, 2147, 2258
TscAI	CASTG	7 cut(s)	786, 1591, 1696, 1929, 2197, 2205, 2359
TseFI	GTSAC	3 cut(s)	938, 1924, 1939
TseI	GCWGC	8 cut(s)	586, 741, 977, 1520, 1523, 1526, 1529, 2215
Tsp45I	GTSAC	3 cut(s)	938, 1924, 1939
TspDTI	ATGAA	2 cut(s)	1200, 1731
TspGWI	ACGGA	4 cut(s)	483, 557, 857, 2059
TspRI	CASTG	7 cut(s)	786, 1591, 1696, 1929, 2197, 2205, 2359
Van91I	CCANNNNNTGG	1 cut(s)	117
VpaK11BI	GGWCC	2 cut(s)	2057, 2154
XagI	CCTNNNNNAGG	3 cut(s)	833, 953, 1604
XceI	RCATGY	1 cut(s)	646
XhoI	CTCGAG	1 cut(s)	701
XmiI	GTMKAC	1 cut(s)	639
XmnI	GAANNNNTTC	1 cut(s)	596
XspI	CTAG	8 cut(s)	327, 413, 738, 818, 1274, 1944, 2018, 2207

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.