Rorug06G0423600

No description available

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000006
Physical Location & Seq
Forward (+)
56176284 .. 56181302
5019 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug06G0423600.1

Sequence Viewer

Length: 3153 bp
ATGGCGACGGAGGAGGCTGTGAATGAAGAGAAGATTCTTGTTTCGGTTAGGGTGAGACCATTGAATGACAAGGAAAAGGCAAAGAATGACGTTTCCGATTGGGAATGCTTCAACAACACCGTCATGTACAGCAGCAACCAACCTGATCGGGCCTCGTCTCCCTCTGCTTATTCCTTTGATAGAGTATTTGGTTACGACTCTTCTACGAAGCAGGTGTATGAAGAGGCAGCTAAGGAGGTTGCTCTTTCAGTCGTTAACGGCATCAACTCAACCATTTTCGCCTATGGACAAACAAGCAGCGGAAAGACGTATACCATGAATGGGGTGACCGAATTTGCTGTTACAGATATATATGATCACATGGAGAGACAAAGTGACCGTGAATTCGTGTTGAAGTTCTCTGCCATGGAGATATATAATGAAGCTGTCAGAGATCTCCTCAGCTCCGAGAATGTTCAACTTAGGCTGCTAGATGATCCAGAGAAAGGTACAGTTGTCGAGAAGCTTTCAGAGGAGGTACTGAGAGACCGGAACCACATGGAGGAGCTTCTTTCCCTCTGCGCAGCACAAAGGAAGATAGGAGAGACCTCTTTGAATGAAACTAGTTCAAGATCTCATCAAATTTTGCGACTGACAATTGAAAGTACTGCCAAACAATTAGAAGGCCTTCAAAGTTCAGGCACTCTTGCTGCTACTGTGAATTTTGTTGATCTTGCGGGCAGCGAGCGTGTCGCTCAGGCATTATCAGCTGGTGCAAGATTGAAAGAAGGTTGTCACATAAATAGAAGTTTACTGACCCTGGGAACTGTAATACGCAAATTAAGCACGGGAAGAAATGGACACATACCTTACAGAGATTCCAAGCTAACACGCATACTGCAAAATTCTTTGGGAGGTAACGCTAGGACAGCCATCATTTGCACCATGAGCCCTGCACGAAGTCATGTTGAGCAATCAAAAAACACCCTGTTCTTTGCAAGTTGTGCAAAAGAGGTTACTACAAATGCAAAGGTCAATGTGGTAAGGTCAGATAAGGCATTGGTAAAGCAATTGCAGCAACAATTGGCTAAAATGGAAAACGCATTGAAGAGCTTAGCAACAAATTCTATGAAAGAGAAGGAACTTTTGTTGCAACAGATGGACAAAGAAATAAAAGAATTGACTAAGCAACGTGATTTTGCTCAATCTCGGGTTCAAAATTTGCTACAATCAGTTGAAGAAGGCCGGGCTAGAATAGTTGAAAATTCAGGATTGGAGTCATCAGACAAGGGTGTAAAAGCATGCAATCCACTAGATAGTACTGACAGACCTAGTTGTTCCTCGAATTCCAGCAAGCACTTCCAACGGCTTTCTGAGATTTCTGAGGAAAATTTTCTGCTGGATGGTAGCGCTCCAAAGTTTGAAGTTTGGGAGGATATTGCAGAAAGATCTCAAGCAGAAGACAAAGATATTGCACAAAGCTCTCATGCAGAACCTGAAGACAATGCACGAAGATCTCACGTAAAAGCTCAAGATATTGCTTTGTGCAATGACACTGCACAAGAGCATCTTACAGAACCTGAAGATGTCTGCAAGGAGATTAGATGCATTGATCAAATGGAAGAACCAAGCATGGACAAGAGTAAAATGTCAATGGATGAAGAAGCAGGTTCATCATCGCAGCAGAAGGAAGATGCCGAGTTGAGAAATGCTAGTGAAGAGTATGAAGCGTTGCAGAGGAAAATACATGATTTGCAAATGACAATTAACACTCTTGTGACTCTTAATGGCCCTCTGGATCAATCTCCTTGTTCCACTGAATCCAGCCCTGTAAGCTTAAGCTTCTCCAGAAGTAGAAGTGCCAGGGCAGTTCTCCTAAGTTCTCTATCTCCAGGTAAGGAGACGGTACAAAACGAGCCTGCAACGCCTACGTTCAAATCAAAGCATGGTATCAACATTGAAAGGTTACACAGAGAAGATGTTCAAGCTCCTGTCGTGAGAGCTACCACGAATACAGATGAAACTAGAGAACCTGAGGCAGAGGAGGACTTACCTGATAAAACACAAGAAGTCTCTCAGCACAAGGTGTCTAGACCGAAGCATGGAATGCTTACCCAAAAAGATTCTGTCGTGAGAGCTTCCACAAATACAGATGAAACTAGAAAGCCTGAGGTAGAGGACTTACCTGATAAAAGACAAGAAGTCTCTCAGCGCAAGGTGTCTAAACTGAAGCATAGAAAGCTTACCCGAAGAGATTCTGGTCGAGAATCTCTTTTGAGTGTTCAAGTGGAGGCAGAGGACCGAGAGCCTGATGAGGAGGATGTTGTGGAGGAGTTACCTAGAGGTTCAACAGGCTTGCGATGGAAGCTCTTCAAATCAAAGCAGCCTGGTTCTAAATCAGTGATGAGTTCATCAGTGATGAGTTCTAAATCAGCTTCTGTTTTGAGTGCTCCGGTGGCTTGGAAAGTTATCCAGAACTATTCGGAGTCAGATTTGGAGGATAATGTCAGTGTTCTCAATTTTGATGAGGAACATAAGAAAGACAGATATGAAAAGCACGGACAATCATCGAGGAGGCCTGGCCGTATGGATACATCAGTACAACGAGCATTGAGAAACAACTCTGACTGGCGGTCTGAATTTGAAAGACAGAGGGGATTAATAATCGAACTCTGGGATGCTTGCTATGTGCCATTGGTCCACAGATCCCATTTCTTCCTCCTTTACAAAGGAGATCCATCTGACTTTCTGTACTTGGAGGTAGAGCTTAGAAGAATGACCGCTTTAAAGGAGACATTCTCCGATGGAGGTAATCGAAGTACTGTGAGTGATCGTCAGGCTCTCACGCCAGCTTCAAGTATGAAGGCTCTTAAGAAAGAGAGGGAAATGTTAAGTAAGAAAGTGCATAAGAGATTCCCAAGAAAAGATAGAGAGAGGCTTTACCAGAAGTGGGGGATTAGACTGAACACGAAGGAAAGGAGCCTACAGTTGACAAACTACCTATGGACGAGCACAATGGACATGAGACACATAAGGGAGAGTGCTGCACTTGTTGCAAAGTTGATTGACCTTGCAGAGCCACTTCAGGCTCCCAAGGAGATACTTGGACTCAGCTTCTTATCCCGACCAGTTCCCAAGAAATCTTCTTTCTGGGACTCCATGTCTACCCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

1050

Amino Acids

118.52

Weight (kDa)

6.22

Isoelectric Point (pI)

57.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Microtub_bd PF16796 12 - 147 5.7e-22 Microtubule binding
Kinesin PF00225 17 - 332 8.3e-101 Kinesin motor domain
DUF3490 PF11995 873 - 1034 1e-64 Domain of unknown function (DUF3490)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 202
Acc16I TGCGCA 1 cut(s) 562
Acc36I ACCTGC 2 cut(s) 202, 1637
AccI GTMKAC 2 cut(s) 311, 3143
AciI CCGC 4 cut(s) 300, 716, 2611, 2760
AclWI GGATC 4 cut(s) 470, 1785, 2679, 2708
AcoI YGGCCR 1 cut(s) 2560
AcuI CTGAAG 4 cut(s) 1497, 1581, 2228, 3047
AdeI CACNNNGTG 1 cut(s) 2065
AfaI GTAC 9 cut(s) 128, 490, 519, 646, 1300, 1887, 2580, 2732, 2800
AfeI AGCGCT 1 cut(s) 1390
AfiI CCNNNNNNNGG 5 cut(s) 321, 485, 541, 2081, 2929
AflII CTTAAG 2 cut(s) 1816, 2849
AhdI GACNNNNNGTC 3 cut(s) 2180, 2611, 3139
AhlI ACTAGT 1 cut(s) 602
AjnI CCWGG 5 cut(s) 798, 1841, 1870, 2365, 2557
AleI CACNNNNGTG 1 cut(s) 1754
Alw21I GWGCWC 2 cut(s) 2431, 2993
AlwI GGATC 4 cut(s) 470, 1785, 2679, 2708
AlwNI CAGNNNCTG 3 cut(s) 1475, 1559, 2417
Ama87I CYCGRG 1 cut(s) 1188
Aor51HI AGCGCT 1 cut(s) 1390
AoxI GGCC 6 cut(s) 150, 664, 1222, 1768, 2555, 2560
ArsI GACNNNNNNTTYG 2 cut(s) 368, 400
AseI ATTAAT 1 cut(s) 2639
Asp700I GAANNNNTTC 5 cut(s) 666, 1371, 1959, 2233, 2348
AspLEI GCGC 3 cut(s) 563, 1391, 2193
AspS9I GGNCC 4 cut(s) 150, 1769, 2278, 2677
AsuC2I CCSGG 1 cut(s) 1226
AsuHPI GGTGA 2 cut(s) 64, 337
AvaI CYCGRG 1 cut(s) 1188
AvaII GGWCC 2 cut(s) 2278, 2677
AxyI CCTNAGG 2 cut(s) 2013, 2148
BaeI ACNNNNGTAYC 4 cut(s) 480, 513, 2562, 2595
BanII GRGCYC 1 cut(s) 932
BbsI GAAGAC 2 cut(s) 1446, 1485
Bbv12I GWGCWC 2 cut(s) 2431, 2993
BbvCI CCTCAGC 1 cut(s) 440
BccI CCATC 6 cut(s) 920, 1132, 1376, 2334, 2725, 2777
BceAI ACGGC 3 cut(s) 274, 1361, 2547
BciT130I CCWGG 5 cut(s) 800, 1843, 1872, 2367, 2559
BciVI GTATCC 1 cut(s) 2563
BclI TGATCA 2 cut(s) 355, 1591
BcnI CCSGG 1 cut(s) 1226
BcuI ACTAGT 1 cut(s) 602
BfmI CTRYAG 2 cut(s) 2963, 3149
BfoI RGCGCY 1 cut(s) 1392
BfrI CTTAAG 2 cut(s) 1816, 2849
BfuAI ACCTGC 2 cut(s) 202, 1637
BfuI GTATCC 1 cut(s) 2563
BglII AGATCT 4 cut(s) 433, 611, 1427, 1493
BlpI GCTNAGC 1 cut(s) 1093
BmcAI AGTACT 3 cut(s) 646, 1300, 2800
Bme1390I CCNGG 6 cut(s) 800, 1226, 1843, 1872, 2367, 2559
Bme18I GGWCC 2 cut(s) 2278, 2677
BmeRI GACNNNNNGTC 3 cut(s) 2180, 2611, 3139
BmeT110I CYCGRG 1 cut(s) 1188
BmgT120I GGNCC 4 cut(s) 150, 1769, 2278, 2677
BmiI GGNNCC 3 cut(s) 533, 2960, 3069
BmrFI CCNGG 6 cut(s) 800, 1226, 1843, 1872, 2367, 2559
BmsI GCATC 5 cut(s) 270, 1555, 1574, 1663, 2647
BpiI GAAGAC 2 cut(s) 1446, 1485
BplI GAGNNNNNCTC 4 cut(s) 423, 455, 2762, 2794
BpmI CTGGAG 2 cut(s) 1810, 1854
Bpu10I CCTNAGC 3 cut(s) 231, 440, 735
Bpu1102I GCTNAGC 1 cut(s) 1093
BpuEI CTTGAG 2 cut(s) 1416, 1494
BpuMI CCSGG 1 cut(s) 1226
BsaAI YACGTR 1 cut(s) 1501
BsaI GGTCTC 3 cut(s) 49, 519, 578
BsaJI CCNNGG 5 cut(s) 405, 798, 799, 1842, 3072
BsaWI WCCGGW 2 cut(s) 528, 2431
Bsc4I CCNNNNNNNGG 5 cut(s) 321, 485, 541, 2081, 2929
Bse1I ACTGG 2 cut(s) 2612, 3107
Bse21I CCTNAGG 2 cut(s) 2013, 2148
Bse3DI GCAATG 1 cut(s) 1534
BseBI CCWGG 5 cut(s) 800, 1843, 1872, 2367, 2559
BseDI CCNNGG 5 cut(s) 405, 798, 799, 1842, 3072
BseGI GGATG 4 cut(s) 1387, 1642, 2305, 2662
BseLI CCNNNNNNNGG 5 cut(s) 321, 485, 541, 2081, 2929
BseMI GCAATG 1 cut(s) 1534
BseNI ACTGG 2 cut(s) 2612, 3107
BseRI GAGGAG 8 cut(s) 26, 428, 527, 557, 2036, 2309, 2324, 2566
BsgI GTGCAG 3 cut(s) 918, 1521, 3009
BshFI GGCC 6 cut(s) 152, 666, 1224, 1770, 2557, 2562
BsiHKAI GWGCWC 2 cut(s) 2431, 2993
BsiHKCI CYCGRG 1 cut(s) 1188
BsiSI CCGG 3 cut(s) 529, 1225, 2432
BslFI GGGAC 1 cut(s) 3146
BslI CCNNNNNNNGG 5 cut(s) 321, 485, 541, 2081, 2929
BsmBI CGTCTC 2 cut(s) 162, 1874
BsmFI GGGAC 1 cut(s) 3146
BsmI GAATGC 2 cut(s) 110, 2091
BsnI GGCC 6 cut(s) 152, 666, 1224, 1770, 2557, 2562
Bso31I GGTCTC 3 cut(s) 49, 519, 578
BsoBI CYCGRG 1 cut(s) 1188
Bsp1286I GDGCHC 3 cut(s) 932, 2431, 2993
Bsp1407I TGTACA 1 cut(s) 126
Bsp1720I GCTNAGC 1 cut(s) 1093
Bsp19I CCATGG 1 cut(s) 405
BspACI CCGC 4 cut(s) 300, 716, 2611, 2760
BspANI GGCC 6 cut(s) 152, 666, 1224, 1770, 2557, 2562
BspLI GGNNCC 3 cut(s) 533, 2960, 3069
BspMI ACCTGC 2 cut(s) 202, 1637
BspPI GGATC 4 cut(s) 470, 1785, 2679, 2708
BspQI GCTCTTC 2 cut(s) 1082, 2354
BspTI CTTAAG 2 cut(s) 1816, 2849
BspTNI GGTCTC 3 cut(s) 49, 519, 578
BsrDI GCAATG 1 cut(s) 1534
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 2 cut(s) 2612, 3107
BssECI CCNNGG 5 cut(s) 405, 798, 799, 1842, 3072
BssNAI GTATAC 1 cut(s) 312
BssT1I CCWWGG 2 cut(s) 405, 3072
Bst1107I GTATAC 1 cut(s) 312
Bst2UI CCWGG 5 cut(s) 800, 1843, 1872, 2367, 2559
Bst4CI ACNGT 8 cut(s) 121, 380, 493, 697, 808, 1885, 2803, 2967
Bst6I CTCTTC 7 cut(s) 21, 205, 216, 1082, 1692, 2224, 2354
BstAFI CTTAAG 2 cut(s) 1816, 2849
BstAPI GCANNNNNTGC 3 cut(s) 983, 2086, 3032
BstAUI TGTACA 1 cut(s) 126
BstBAI YACGTR 1 cut(s) 1501
BstC8I GCNNGC 8 cut(s) 718, 725, 1282, 1334, 1899, 2336, 2662, 2829
BstDSI CCRYGG 1 cut(s) 405
BstEII GGTNACC 1 cut(s) 325
BstF5I GGATG 4 cut(s) 1387, 1642, 2305, 2662
BstH2I RGCGCY 1 cut(s) 1392
BstHHI GCGC 3 cut(s) 563, 1391, 2193
BstNI CCWGG 5 cut(s) 800, 1843, 1872, 2367, 2559
BstNSI RCATGY 1 cut(s) 1284
BstPI GGTNACC 1 cut(s) 325
BstSCI CCNGG 6 cut(s) 798, 1224, 1841, 1870, 2365, 2557
BstSFI CTRYAG 2 cut(s) 2963, 3149
BstV2I GAAGAC 2 cut(s) 1446, 1485
BstX2I RGATCY 6 cut(s) 433, 611, 1427, 1493, 2684, 2713
BstYI RGATCY 6 cut(s) 433, 611, 1427, 1493, 2684, 2713
BstZ17I GTATAC 1 cut(s) 312
Bsu36I CCTNAGG 2 cut(s) 2013, 2148
BsuI GTATCC 1 cut(s) 2563
BsuRI GGCC 6 cut(s) 152, 666, 1224, 1770, 2557, 2562
BtgI CCRYGG 1 cut(s) 405
BtgZI GCGATG 2 cut(s) 1641, 2353
BtsCI GGATG 4 cut(s) 1387, 1642, 2305, 2662
BtsI GCAGTG 1 cut(s) 1533
BtsIMutI CAGTG 5 cut(s) 1533, 1794, 2385, 2400, 2494
BveI ACCTGC 2 cut(s) 202, 1637
Cac8I GCNNGC 8 cut(s) 718, 725, 1282, 1334, 1899, 2336, 2662, 2829
CaiI CAGNNNCTG 3 cut(s) 1475, 1559, 2417
CfoI GCGC 3 cut(s) 563, 1391, 2193
Cfr13I GGNCC 4 cut(s) 150, 1769, 2278, 2677
Csp6I GTAC 9 cut(s) 127, 489, 518, 645, 1299, 1886, 2579, 2731, 2799
CviQI GTAC 9 cut(s) 127, 489, 518, 645, 1299, 1886, 2579, 2731, 2799
DraI TTTAAA 1 cut(s) 2766
DraIII CACNNNGTG 1 cut(s) 2065
DriI GACNNNNNGTC 3 cut(s) 2180, 2611, 3139
EaeI YGGCCR 1 cut(s) 2560
Eam1104I CTCTTC 7 cut(s) 21, 205, 216, 1082, 1692, 2224, 2354
Eam1105I GACNNNNNGTC 3 cut(s) 2180, 2611, 3139
EarI CTCTTC 7 cut(s) 21, 205, 216, 1082, 1692, 2224, 2354
Eco130I CCWWGG 2 cut(s) 405, 3072
Eco147I AGGCCT 2 cut(s) 666, 2557
Eco24I GRGCYC 1 cut(s) 932
Eco31I GGTCTC 3 cut(s) 49, 519, 578
Eco47I GGWCC 2 cut(s) 2278, 2677
Eco47III AGCGCT 1 cut(s) 1390
Eco57I CTGAAG 4 cut(s) 1497, 1581, 2228, 3047
Eco81I CCTNAGG 2 cut(s) 2013, 2148
Eco88I CYCGRG 1 cut(s) 1188
Eco91I GGTNACC 1 cut(s) 325
EcoO65I GGTNACC 1 cut(s) 325
EcoRI GAATTC 2 cut(s) 383, 1324
EcoRII CCWGG 5 cut(s) 798, 1841, 1870, 2365, 2557
EcoT14I CCWWGG 2 cut(s) 405, 3072
EcoT22I ATGCAT 1 cut(s) 1589
EcoT38I GRGCYC 1 cut(s) 932
ErhI CCWWGG 2 cut(s) 405, 3072
Esp3I CGTCTC 2 cut(s) 162, 1874
FalI AAGNNNNNCTT 2 cut(s) 1533, 1565
FaqI GGGAC 1 cut(s) 3146
FauI CCCGC 1 cut(s) 709
FbaI TGATCA 2 cut(s) 355, 1591
FblI GTMKAC 2 cut(s) 311, 3143
FokI GGATG 4 cut(s) 1394, 1649, 2312, 2669
FriOI GRGCYC 1 cut(s) 932
FspI TGCGCA 1 cut(s) 562
GlaI GCGC 3 cut(s) 562, 1390, 2192
GsuI CTGGAG 2 cut(s) 1810, 1854
HaeII RGCGCY 1 cut(s) 1392
HaeIII GGCC 6 cut(s) 152, 666, 1224, 1770, 2557, 2562
HapII CCGG 3 cut(s) 529, 1225, 2432
HhaI GCGC 3 cut(s) 563, 1391, 2193
Hin6I GCGC 3 cut(s) 561, 1389, 2191
HinP1I GCGC 3 cut(s) 561, 1389, 2191
HincII GTYRAC 2 cut(s) 256, 2970
HindII GTYRAC 2 cut(s) 256, 2970
HindIII AAGCTT 4 cut(s) 503, 1813, 1819, 2219
HpaI GTTAAC 1 cut(s) 256
HpaII CCGG 3 cut(s) 529, 1225, 2432
HphI GGTGA 2 cut(s) 64, 337
Hpy166II GTNNAC 6 cut(s) 256, 312, 791, 2680, 2970, 3144
Hpy8I GTNNAC 6 cut(s) 256, 312, 791, 2680, 2970, 3144
Hpy99I CGWCG 1 cut(s) 10
HpyAV CCTTC 8 cut(s) 656, 677, 761, 1111, 1214, 1660, 2836, 2944
HpyCH4III ACNGT 8 cut(s) 121, 380, 493, 697, 808, 1885, 2803, 2967
HpyCH4IV ACGT 5 cut(s) 90, 308, 1171, 1500, 1910
HpySE526I ACGT 5 cut(s) 90, 308, 1171, 1500, 1910
HspAI GCGC 3 cut(s) 561, 1389, 2191
Ksp22I TGATCA 2 cut(s) 355, 1591
KspAI GTTAAC 1 cut(s) 256
LguI GCTCTTC 2 cut(s) 1082, 2354
LmnI GCTCC 7 cut(s) 449, 544, 1396, 1972, 2434, 2958, 3073
LweI GCATC 5 cut(s) 270, 1555, 1574, 1663, 2647
MaeII ACGT 5 cut(s) 90, 308, 1171, 1500, 1910
MfeI CAATTG 3 cut(s) 636, 1049, 1061
MflI RGATCY 6 cut(s) 433, 611, 1427, 1493, 2684, 2713
MhlI GDGCHC 3 cut(s) 932, 2431, 2993
MlyI GAGTC 6 cut(s) 191, 1265, 1753, 2474, 3081, 3128
MmeI TCCRAC 1 cut(s) 1366
Mph1103I ATGCAT 1 cut(s) 1589
MroXI GAANNNNTTC 5 cut(s) 666, 1371, 1959, 2233, 2348
MseI TTAA 9 cut(s) 255, 821, 1746, 1764, 1817, 2639, 2765, 2850, 2870
MslI CAYNNNNRTG 2 cut(s) 122, 1754
MspA1I CMGCKG 2 cut(s) 300, 749
MspCI CTTAAG 2 cut(s) 1816, 2849
MspI CCGG 3 cut(s) 529, 1225, 2432
MspR9I CCNGG 6 cut(s) 800, 1226, 1843, 1872, 2367, 2559
MunI CAATTG 3 cut(s) 636, 1049, 1061
Mva1269I GAATGC 2 cut(s) 110, 2091
MvaI CCWGG 5 cut(s) 800, 1843, 1872, 2367, 2559
NciI CCSGG 1 cut(s) 1226
NcoI CCATGG 1 cut(s) 405
NlaIV GGNNCC 3 cut(s) 533, 2960, 3069
NmeAIII GCCGAG 1 cut(s) 1702
NmuCI GTSAC 4 cut(s) 325, 374, 773, 1756
NsbI TGCGCA 1 cut(s) 562
NsiI ATGCAT 1 cut(s) 1589
NspI RCATGY 1 cut(s) 1284
OliI CACNNNNGTG 1 cut(s) 1754
PaeI GCATGC 1 cut(s) 1284
PaqCI CACCTGC 1 cut(s) 202
PasI CCCWGGG 1 cut(s) 799
PceI AGGCCT 2 cut(s) 666, 2557
PciSI GCTCTTC 2 cut(s) 1082, 2354
PctI GAATGC 2 cut(s) 110, 2091
PdmI GAANNNNTTC 5 cut(s) 666, 1371, 1959, 2233, 2348
PfeI GAWTC 7 cut(s) 34, 857, 1799, 2102, 2234, 2246, 2892
PleI GAGTC 6 cut(s) 191, 1264, 1753, 2473, 3081, 3128
PpsI GAGTC 6 cut(s) 191, 1264, 1753, 2473, 3081, 3128
Ppu21I YACGTR 1 cut(s) 1501
PshBI ATTAAT 1 cut(s) 2639
Psp6I CCWGG 5 cut(s) 798, 1841, 1870, 2365, 2557
PspEI GGTNACC 1 cut(s) 325
PspGI CCWGG 5 cut(s) 798, 1841, 1870, 2365, 2557
PspN4I GGNNCC 3 cut(s) 533, 2960, 3069
PspPI GGNCC 4 cut(s) 150, 1769, 2278, 2677
PstNI CAGNNNCTG 3 cut(s) 1475, 1559, 2417
PsuI RGATCY 6 cut(s) 433, 611, 1427, 1493, 2684, 2713
PvuII CAGCTG 1 cut(s) 749
RsaI GTAC 9 cut(s) 128, 490, 519, 646, 1300, 1887, 2580, 2732, 2800
RsaNI GTAC 9 cut(s) 127, 489, 518, 645, 1299, 1886, 2579, 2731, 2799
RseI CAYNNNNRTG 2 cut(s) 122, 1754
SapI GCTCTTC 2 cut(s) 1082, 2354
SaqAI TTAA 9 cut(s) 255, 821, 1746, 1764, 1817, 2639, 2765, 2850, 2870
Sau96I GGNCC 4 cut(s) 150, 1769, 2278, 2677
ScaI AGTACT 3 cut(s) 646, 1300, 2800
SchI GAGTC 6 cut(s) 191, 1265, 1753, 2474, 3081, 3128
ScrFI CCNGG 6 cut(s) 800, 1226, 1843, 1872, 2367, 2559
SduI GDGCHC 3 cut(s) 932, 2431, 2993
SfaNI GCATC 5 cut(s) 270, 1555, 1574, 1663, 2647
SfcI CTRYAG 2 cut(s) 2963, 3149
SinI GGWCC 2 cut(s) 2278, 2677
SmiMI CAYNNNNRTG 2 cut(s) 122, 1754
SmlI CTYRAG 4 cut(s) 1431, 1509, 1816, 2849
SmoI CTYRAG 4 cut(s) 1431, 1509, 1816, 2849
SpeI ACTAGT 1 cut(s) 602
SphI GCATGC 1 cut(s) 1284
SseBI AGGCCT 2 cut(s) 666, 2557
SsiI CCGC 4 cut(s) 300, 716, 2611, 2760
StuI AGGCCT 2 cut(s) 666, 2557
StyD4I CCNGG 6 cut(s) 798, 1224, 1841, 1870, 2365, 2557
StyI CCWWGG 2 cut(s) 405, 3072
TaaI ACNGT 8 cut(s) 121, 380, 493, 697, 808, 1885, 2803, 2967
TaiI ACGT 5 cut(s) 93, 311, 1174, 1503, 1913
TaqI TCGA 6 cut(s) 498, 1322, 2242, 2549, 2646, 2794
TaqII GACCGA 3 cut(s) 344, 2089, 2295
TatI WGTACW 6 cut(s) 126, 644, 1298, 2578, 2730, 2798
TfiI GAWTC 7 cut(s) 34, 857, 1799, 2102, 2234, 2246, 2892
Tru1I TTAA 9 cut(s) 255, 821, 1746, 1764, 1817, 2639, 2765, 2850, 2870
Tru9I TTAA 9 cut(s) 255, 821, 1746, 1764, 1817, 2639, 2765, 2850, 2870
TscAI CASTG 5 cut(s) 1540, 1801, 2385, 2400, 2494
TseFI GTSAC 4 cut(s) 325, 374, 773, 1756
Tsp45I GTSAC 4 cut(s) 325, 374, 773, 1756
TspGWI ACGGA 2 cut(s) 23, 2553
TspRI CASTG 5 cut(s) 1540, 1801, 2385, 2400, 2494
Vha464I CTTAAG 2 cut(s) 1816, 2849
VpaK11BI GGWCC 2 cut(s) 2278, 2677
VspI ATTAAT 1 cut(s) 2639
XbaI TCTAGA 1 cut(s) 2069
XceI RCATGY 1 cut(s) 1284
XmiI GTMKAC 2 cut(s) 311, 3143
XmnI GAANNNNTTC 5 cut(s) 666, 1371, 1959, 2233, 2348
ZrmI AGTACT 3 cut(s) 646, 1300, 2800
Zsp2I ATGCAT 1 cut(s) 1589
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.