pycom07g00320

ENT

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Reverse (-)
307949 .. 314137
6189 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g00320.5

Sequence Viewer

Length: 1428 bp
ATGGACTACGAGCCCTACGATAGCAGCGGAACTGATGACGATCTTCCTCCATCACACCAGCAGCATAGAGTTCCCAGAGGGGGCCGCGTTACAGGGAATGGAAGATCTGGTGGGGGTTCTGTCCCATATCCTAGGATGTATGGTGAAACTGACATGGAAGCACAAATTCACCAGCTTGAACGAGAAGCATACAGTTCAGTTCTGAGAGCCTTTAAAGCTCAAGCTGATGCCATTACTTGGGAAAAGGAAGCTCTGTTGACAAACCTTAGAAAGGAGTTGAGGTTATCGAATGAGGAGCACAAAGAACTTGTAGGACGGGTTAATGCAGCAGATGATATCATAGAGAGGATAAGGGACTGGAGACAGGCTGGCGGGGTTCAACCGGGCATGCTGAGTACTGTTCAAGCAGTGCATGATCCAATACCTAGTCCTACTGTCTCTGTATCACGCAAGAAACAGAAGATGGCGCAGTCAGCACATACACAGTCCTTTACTGGGCCAACACCATCATTTCATCCACCAGCAGTTACCACATCCCACCAGCCATCTTCGTCCACTGTAAAACGAGGATCTGTCCCAGCCCCAGCCTCAGGAGCTAAGGGCAAGAAGCATAAACCTGGTCAAATTTTGCCTGGTGCTTCTTCAATGAAGCAGTTCCCTTCCTCAGGTCCAACAGGAAGGGGTCAAATTTCGAATAGAGTTTCGACTGGTGCCGTTGTAAGTGAACCTGCTGAAGGAAAGACAAATGATACCTTGATTGGGAGGAAAGTAAGGACTAGGTGGCCCGATGACAACACTTTTTATGAAGCTGTTATAAAAGACTACAATCAAGCAGAGGGACGGCACCATCTAGTCTATGATATGAATTCGGCAAATGAAACATGGGAATGGGTTAATCTATCAGAGATATCTCCGGAGGATATTCAGTGGGTAGGTGAAGATCCTGGAATCTCTCATCGTGGGGGTTATAGTGGATCTGGTCATGGAATGAATAGATTTGTAGGTCGTGACAATGTTCCAGTTCCTGGAAGAGGTAGAGGGATCCCAAAGGCTCAAACAAGAAAAGATTTTCCGCCTTCACAAAATGGCATTGGAAAGAAGGCTCCGGACAATATCCAGTTACTTCACACAGATACTTTAATTAAGGAGGTAGAAAGGGTCTTTGGTGAAAACCATCCAGACTCTGTTGAAATTGAGAAGGCAAAGAAACTGTTGAAAGATCATGAACAAGCACTTATTGATGCAATTGCAAAGCTTGCTGACATTTCTGACGGTGAATGCGGTAATCATTGCTTTATCTTGTTTTGTTGTTCAAAGTTTACCTTGTTGTATGTAAGCTTGACCTTTGCCTTTAAACAGCTGATGGTCACGGACACAGTTCTTTCACAGGCAACCGATGGAATTGAGAATGATAGATGGCTGGTTTAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

476

Amino Acids

52.2

Weight (kDa)

6.8

Isoelectric Point (pI)

38.2

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 815
Acc36I ACCTGC 1 cut(s) 736
AccB1I GGYRCC 2 cut(s) 710, 843
AccB7I CCANNNNNTGG 2 cut(s) 237, 1025
AccII CGCG 1 cut(s) 87
AccIII TCCGGA 2 cut(s) 913, 1105
AciI CCGC 5 cut(s) 27, 85, 372, 1073, 1281
AclWI GGATC 6 cut(s) 410, 577, 935, 982, 1036, 1049
AcsI RAATTY 4 cut(s) 165, 624, 687, 865
AcuI CTGAAG 1 cut(s) 753
AfaI GTAC 1 cut(s) 397
AgsI TTSAA 7 cut(s) 179, 380, 404, 645, 1190, 1216, 1314
AjnI CCWGG 4 cut(s) 616, 631, 943, 1024
AjuI GAANNNNNNNTTGG 2 cut(s) 1146, 1178
AluBI AGCT 9 cut(s) 175, 218, 224, 251, 596, 809, 1255, 1338, 1360
AluI AGCT 9 cut(s) 175, 218, 224, 251, 596, 809, 1255, 1338, 1360
Alw21I GWGCWC 1 cut(s) 300
Alw26I GTCTC 2 cut(s) 355, 442
AlwI GGATC 6 cut(s) 410, 577, 935, 982, 1036, 1049
AlwNI CAGNNNCTG 2 cut(s) 1025, 1184
Aor13HI TCCGGA 2 cut(s) 913, 1105
AoxI GGCC 3 cut(s) 82, 497, 782
ApeKI GCWGC 3 cut(s) 24, 61, 326
ApoI RAATTY 4 cut(s) 165, 624, 687, 865
Asp700I GAANNNNTTC 1 cut(s) 653
AspA2I CCTAGG 1 cut(s) 131
AspLEI GCGC 1 cut(s) 469
AspS9I GGNCC 4 cut(s) 82, 497, 668, 783
AsuC2I CCSGG 1 cut(s) 384
AsuHPI GGTGA 5 cut(s) 155, 161, 947, 1178, 1286
AsuII TTCGAA 1 cut(s) 692
AvaII GGWCC 1 cut(s) 668
AvrII CCTAGG 1 cut(s) 131
AxyI CCTNAGG 2 cut(s) 589, 664
BamHI GGATCC 1 cut(s) 1041
BanI GGYRCC 2 cut(s) 710, 843
BanII GRGCYC 1 cut(s) 15
Bbv12I GWGCWC 1 cut(s) 300
BbvI GCAGC 3 cut(s) 36, 73, 338
BccI CCATC 9 cut(s) 58, 457, 514, 553, 855, 1182, 1357, 1391, 1410
BceAI ACGGC 2 cut(s) 698, 857
BciT130I CCWGG 4 cut(s) 618, 633, 945, 1026
BcnI CCSGG 1 cut(s) 384
BcoDI GTCTC 2 cut(s) 355, 442
BfaI CTAG 4 cut(s) 132, 426, 777, 851
BfuAI ACCTGC 1 cut(s) 736
BglII AGATCT 1 cut(s) 104
BisI GCNGC 4 cut(s) 25, 62, 85, 327
BlnI CCTAGG 1 cut(s) 131
BlsI GCNGC 4 cut(s) 26, 63, 86, 328
BmcAI AGTACT 1 cut(s) 397
Bme1390I CCNGG 5 cut(s) 384, 618, 633, 945, 1026
Bme18I GGWCC 1 cut(s) 668
BmgT120I GGNCC 4 cut(s) 82, 497, 668, 783
BmiI GGNNCC 5 cut(s) 83, 712, 845, 1043, 1104
BmrFI CCNGG 5 cut(s) 384, 618, 633, 945, 1026
BmrI ACTGGG 1 cut(s) 504
BmsI GCATC 2 cut(s) 217, 1231
BmuI ACTGGG 1 cut(s) 504
BpmI CTGGAG 1 cut(s) 379
Bpu10I CCTNAGC 1 cut(s) 597
Bpu14I TTCGAA 1 cut(s) 692
BpuEI CTTGAG 1 cut(s) 204
BpuMI CCSGG 1 cut(s) 384
BsaBI GATNNNNATC 1 cut(s) 39
BsaJI CCNNGG 1 cut(s) 131
BsaWI WCCGGW 2 cut(s) 913, 1105
BsaXI ACNNNNNCTCC 2 cut(s) 266, 296
Bse1I ACTGG 5 cut(s) 362, 499, 712, 1019, 1117
Bse21I CCTNAGG 2 cut(s) 589, 664
Bse3DI GCAATG 1 cut(s) 1288
Bse8I GATNNNNATC 1 cut(s) 39
BseAI TCCGGA 2 cut(s) 913, 1105
BseBI CCWGG 4 cut(s) 618, 633, 945, 1026
BseDI CCNNGG 1 cut(s) 131
BseGI GGATG 4 cut(s) 141, 514, 533, 1174
BseJI GATNNNNATC 1 cut(s) 39
BseMI GCAATG 1 cut(s) 1288
BseMII CTCAG 4 cut(s) 194, 383, 603, 678
BseNI ACTGG 5 cut(s) 362, 499, 712, 1019, 1117
BseRI GAGGAG 1 cut(s) 308
BseXI GCAGC 3 cut(s) 36, 73, 338
BseYI CCCAGC 2 cut(s) 577, 583
Bsh1236I CGCG 1 cut(s) 87
BshFI GGCC 3 cut(s) 84, 499, 784
BshNI GGYRCC 2 cut(s) 710, 843
BsiHKAI GWGCWC 1 cut(s) 300
BsiSI CCGG 3 cut(s) 383, 914, 1106
BslFI GGGAC 4 cut(s) 107, 368, 560, 852
BsmAI GTCTC 2 cut(s) 355, 442
BsmFI GGGAC 4 cut(s) 107, 368, 560, 852
BsmI GAATGC 1 cut(s) 1283
BsnI GGCC 3 cut(s) 84, 499, 784
Bsp119I TTCGAA 1 cut(s) 692
Bsp1286I GDGCHC 2 cut(s) 15, 300
Bsp13I TCCGGA 2 cut(s) 913, 1105
Bsp143I GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
BspACI CCGC 5 cut(s) 27, 85, 372, 1073, 1281
BspANI GGCC 3 cut(s) 84, 499, 784
BspCNI CTCAG 4 cut(s) 195, 384, 602, 677
BspEI TCCGGA 2 cut(s) 913, 1105
BspFNI CGCG 1 cut(s) 87
BspHI TCATGA 1 cut(s) 1222
BspLI GGNNCC 5 cut(s) 83, 712, 845, 1043, 1104
BspMI ACCTGC 1 cut(s) 736
BspPI GGATC 6 cut(s) 410, 577, 935, 982, 1036, 1049
BspT104I TTCGAA 1 cut(s) 692
BspT107I GGYRCC 2 cut(s) 710, 843
BsrDI GCAATG 1 cut(s) 1288
BsrI ACTGG 5 cut(s) 362, 499, 712, 1019, 1117
BssECI CCNNGG 1 cut(s) 131
BssMI GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
BssT1I CCWWGG 1 cut(s) 131
Bst2UI CCWGG 4 cut(s) 618, 633, 945, 1026
Bst4CI ACNGT 8 cut(s) 194, 400, 436, 486, 559, 1212, 1274, 1378
Bst6I CTCTTC 1 cut(s) 1024
BstAPI GCANNNNNTGC 1 cut(s) 1256
BstBI TTCGAA 1 cut(s) 692
BstC8I GCNNGC 3 cut(s) 370, 389, 1257
BstDEI CTNAG 6 cut(s) 203, 266, 392, 589, 597, 664
BstENI CCTNNNNNAGG 4 cut(s) 269, 663, 732, 1029
BstF5I GGATG 4 cut(s) 141, 514, 533, 1174
BstFNI CGCG 1 cut(s) 87
BstHHI GCGC 1 cut(s) 469
BstKTI GATC 8 cut(s) 43, 107, 418, 572, 943, 977, 1044, 1222
BstMAI GTCTC 2 cut(s) 355, 442
BstMBI GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
BstMWI GCNNNNNNNGC 4 cut(s) 215, 473, 593, 1256
BstNI CCWGG 4 cut(s) 618, 633, 945, 1026
BstNSI RCATGY 1 cut(s) 391
BstSCI CCNGG 5 cut(s) 382, 616, 631, 943, 1024
BstUI CGCG 1 cut(s) 87
BstV1I GCAGC 3 cut(s) 36, 73, 338
BstX2I RGATCY 5 cut(s) 104, 569, 940, 974, 1041
BstYI RGATCY 5 cut(s) 104, 569, 940, 974, 1041
Bsu36I CCTNAGG 2 cut(s) 589, 664
BsuRI GGCC 3 cut(s) 84, 499, 784
BtsCI GGATG 4 cut(s) 141, 514, 533, 1174
BtsI GCAGTG 1 cut(s) 414
BtsIMutI CAGTG 3 cut(s) 414, 555, 932
BveI ACCTGC 1 cut(s) 736
Cac8I GCNNGC 3 cut(s) 370, 389, 1257
CaiI CAGNNNCTG 2 cut(s) 1025, 1184
CciI TCATGA 1 cut(s) 1222
CfoI GCGC 1 cut(s) 469
Cfr13I GGNCC 4 cut(s) 82, 497, 668, 783
CsiI ACCWGGT 1 cut(s) 616
Csp6I GTAC 1 cut(s) 396
CviAII CATG 6 cut(s) 154, 388, 413, 882, 983, 1223
CviQI GTAC 1 cut(s) 396
DdeI CTNAG 6 cut(s) 203, 266, 392, 589, 597, 664
DpnI GATC 8 cut(s) 42, 106, 417, 571, 942, 976, 1043, 1221
DpnII GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
DraI TTTAAA 2 cut(s) 214, 1354
Eam1104I CTCTTC 1 cut(s) 1024
EarI CTCTTC 1 cut(s) 1024
EciI GGCGGA 1 cut(s) 1062
Eco130I CCWWGG 1 cut(s) 131
Eco24I GRGCYC 1 cut(s) 15
Eco32I GATATC 2 cut(s) 337, 909
Eco47I GGWCC 1 cut(s) 668
Eco57I CTGAAG 1 cut(s) 753
Eco81I CCTNAGG 2 cut(s) 589, 664
EcoNI CCTNNNNNAGG 4 cut(s) 269, 663, 732, 1029
EcoRI GAATTC 1 cut(s) 865
EcoRII CCWGG 4 cut(s) 616, 631, 943, 1024
EcoRV GATATC 2 cut(s) 337, 909
EcoT14I CCWWGG 1 cut(s) 131
EcoT38I GRGCYC 1 cut(s) 15
ErhI CCWWGG 1 cut(s) 131
FaeI CATG 6 cut(s) 157, 391, 416, 885, 986, 1226
FalI AAGNNNNNCTT 2 cut(s) 1307, 1339
FaqI GGGAC 4 cut(s) 107, 368, 560, 852
FatI CATG 6 cut(s) 153, 387, 412, 881, 982, 1222
FauI CCCGC 1 cut(s) 365
Fnu4HI GCNGC 4 cut(s) 25, 62, 85, 327
FokI GGATG 4 cut(s) 148, 501, 520, 1161
FriOI GRGCYC 1 cut(s) 15
Fsp4HI GCNGC 4 cut(s) 25, 62, 85, 327
FspBI CTAG 4 cut(s) 132, 426, 777, 851
GlaI GCGC 1 cut(s) 468
GluI GCNGC 4 cut(s) 25, 62, 85, 327
GsaI CCCAGC 2 cut(s) 581, 587
GsuI CTGGAG 1 cut(s) 379
HaeIII GGCC 3 cut(s) 84, 499, 784
HapII CCGG 3 cut(s) 383, 914, 1106
HhaI GCGC 1 cut(s) 469
Hin1II CATG 6 cut(s) 157, 391, 416, 885, 986, 1226
Hin6I GCGC 1 cut(s) 467
HinP1I GCGC 1 cut(s) 467
HincII GTYRAC 1 cut(s) 258
HindII GTYRAC 1 cut(s) 258
HindIII AAGCTT 2 cut(s) 1253, 1336
HinfI GANTC 2 cut(s) 948, 1181
HpaII CCGG 3 cut(s) 383, 914, 1106
HphI GGTGA 5 cut(s) 155, 161, 947, 1178, 1286
Hpy166II GTNNAC 4 cut(s) 258, 555, 725, 1320
Hpy188I TCNGA 3 cut(s) 204, 904, 1270
Hpy188III TCNNGA 6 cut(s) 591, 914, 1007, 1106, 1178, 1223
Hpy8I GTNNAC 4 cut(s) 258, 555, 725, 1320
HpyAV CCTTC 6 cut(s) 669, 672, 728, 1086, 1093, 1192
HpyCH4III ACNGT 8 cut(s) 194, 400, 436, 486, 559, 1212, 1274, 1378
HpyCH4V TGCA 4 cut(s) 326, 412, 1244, 1250
HpyF10VI GCNNNNNNNGC 4 cut(s) 215, 473, 593, 1256
HpyF3I CTNAG 6 cut(s) 203, 266, 392, 589, 597, 664
Hsp92II CATG 6 cut(s) 157, 391, 416, 885, 986, 1226
HspAI GCGC 1 cut(s) 467
Kpn2I TCCGGA 2 cut(s) 913, 1105
Kzo9I GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
LmnI GCTCC 3 cut(s) 295, 593, 1108
Lsp1109I GCAGC 3 cut(s) 36, 73, 338
LweI GCATC 2 cut(s) 217, 1231
MabI ACCWGGT 1 cut(s) 616
MaeI CTAG 4 cut(s) 132, 426, 777, 851
MaeIII GTNAC 5 cut(s) 88, 526, 1007, 1119, 1366
MalI GATC 8 cut(s) 42, 106, 417, 571, 942, 976, 1043, 1221
MboI GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
MboII GAAGA 7 cut(s) 35, 114, 472, 540, 633, 950, 1041
MfeI CAATTG 1 cut(s) 1245
MflI RGATCY 5 cut(s) 104, 569, 940, 974, 1041
MhlI GDGCHC 2 cut(s) 15, 300
MluCI AATT 8 cut(s) 165, 624, 687, 865, 1140, 1191, 1245, 1401
MlyI GAGTC 1 cut(s) 1175
MmeI TCCRAC 1 cut(s) 695
MroI TCCGGA 2 cut(s) 913, 1105
MroXI GAANNNNTTC 1 cut(s) 653
MseI TTAA 7 cut(s) 213, 321, 894, 1139, 1143, 1353, 1426
MslI CAYNNNNRTG 1 cut(s) 886
MspA1I CMGCKG 2 cut(s) 27, 1360
MspI CCGG 3 cut(s) 383, 914, 1106
MspR9I CCNGG 5 cut(s) 384, 618, 633, 945, 1026
MunI CAATTG 1 cut(s) 1245
Mva1269I GAATGC 1 cut(s) 1283
MvaI CCWGG 4 cut(s) 618, 633, 945, 1026
MvnI CGCG 1 cut(s) 87
MwoI GCNNNNNNNGC 4 cut(s) 215, 473, 593, 1256
NciI CCSGG 1 cut(s) 384
NdeII GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
NlaIII CATG 6 cut(s) 157, 391, 416, 885, 986, 1226
NlaIV GGNNCC 5 cut(s) 83, 712, 845, 1043, 1104
NmuCI GTSAC 2 cut(s) 1007, 1366
NspI RCATGY 1 cut(s) 391
NspV TTCGAA 1 cut(s) 692
PacI TTAATTAA 1 cut(s) 1143
PaeI GCATGC 1 cut(s) 391
PagI TCATGA 1 cut(s) 1222
PcsI WCGNNNNNNNCGW 1 cut(s) 15
PctI GAATGC 1 cut(s) 1283
PdmI GAANNNNTTC 1 cut(s) 653
PfeI GAWTC 1 cut(s) 948
PflMI CCANNNNNTGG 2 cut(s) 237, 1025
PfoI TCCNGGA 2 cut(s) 943, 1024
PkrI GCNGC 4 cut(s) 26, 63, 86, 328
PleI GAGTC 1 cut(s) 1175
PpsI GAGTC 1 cut(s) 1175
PsiI TTATAA 1 cut(s) 815
Psp6I CCWGG 4 cut(s) 616, 631, 943, 1024
PspFI CCCAGC 2 cut(s) 577, 583
PspGI CCWGG 4 cut(s) 616, 631, 943, 1024
PspN4I GGNNCC 5 cut(s) 83, 712, 845, 1043, 1104
PspPI GGNCC 4 cut(s) 82, 497, 668, 783
PstNI CAGNNNCTG 2 cut(s) 1025, 1184
PsuI RGATCY 5 cut(s) 104, 569, 940, 974, 1041
PvuII CAGCTG 1 cut(s) 1360
RsaI GTAC 1 cut(s) 397
RsaNI GTAC 1 cut(s) 396
RseI CAYNNNNRTG 1 cut(s) 886
SaqAI TTAA 7 cut(s) 213, 321, 894, 1139, 1143, 1353, 1426
SatI GCNGC 4 cut(s) 25, 62, 85, 327
Sau3AI GATC 8 cut(s) 40, 104, 415, 569, 940, 974, 1041, 1219
Sau96I GGNCC 4 cut(s) 82, 497, 668, 783
ScaI AGTACT 1 cut(s) 397
SchI GAGTC 1 cut(s) 1175
ScrFI CCNGG 5 cut(s) 384, 618, 633, 945, 1026
SduI GDGCHC 2 cut(s) 15, 300
SexAI ACCWGGT 1 cut(s) 616
SfaNI GCATC 2 cut(s) 217, 1231
SfuI TTCGAA 1 cut(s) 692
SinI GGWCC 1 cut(s) 668
SmiMI CAYNNNNRTG 1 cut(s) 886
SmlI CTYRAG 1 cut(s) 219
SmoI CTYRAG 1 cut(s) 219
SphI GCATGC 1 cut(s) 391
Sse9I AATT 8 cut(s) 165, 624, 687, 865, 1140, 1191, 1245, 1401
SsiI CCGC 5 cut(s) 27, 85, 372, 1073, 1281
SspMI CTAG 4 cut(s) 132, 426, 777, 851
StyD4I CCNGG 5 cut(s) 382, 616, 631, 943, 1024
StyI CCWWGG 1 cut(s) 131
TaaI ACNGT 8 cut(s) 194, 400, 436, 486, 559, 1212, 1274, 1378
TaqI TCGA 3 cut(s) 287, 692, 704
TasI AATT 8 cut(s) 165, 624, 687, 865, 1140, 1191, 1245, 1401
TatI WGTACW 1 cut(s) 395
TauI GCSGC 1 cut(s) 87
TfiI GAWTC 1 cut(s) 948
Tru1I TTAA 7 cut(s) 213, 321, 894, 1139, 1143, 1353, 1426
Tru9I TTAA 7 cut(s) 213, 321, 894, 1139, 1143, 1353, 1426
TscAI CASTG 3 cut(s) 414, 562, 932
TseFI GTSAC 2 cut(s) 1007, 1366
TseI GCWGC 3 cut(s) 24, 61, 326
Tsp45I GTSAC 2 cut(s) 1007, 1366
TspDTI ATGAA 7 cut(s) 503, 662, 819, 878, 891, 1004, 1239
TspGWI ACGGA 1 cut(s) 1385
TspRI CASTG 3 cut(s) 414, 562, 932
Van91I CCANNNNNTGG 2 cut(s) 237, 1025
VpaK11BI GGWCC 1 cut(s) 668
XagI CCTNNNNNAGG 4 cut(s) 269, 663, 732, 1029
XapI RAATTY 4 cut(s) 165, 624, 687, 865
XceI RCATGY 1 cut(s) 391
XmaJI CCTAGG 1 cut(s) 131
XmnI GAANNNNTTC 1 cut(s) 653
XspI CTAG 4 cut(s) 132, 426, 777, 851
ZrmI AGTACT 1 cut(s) 397
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.