Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr7

Orthogroup ID

OG0011821

Physical Location & Seq

Genomic Coordinates Reverse (-)

21821983 .. 21824793

Gene Structure 2811 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1500 bp

ATGACTCGAGACTCCTTGAACAATGCCCCAAAGTCCAAACAAAGTCAACACGAAGACTCCACTTTCAAAACTAAAACGACGACGTATCGCAACCCGGGGGACACGTTGGTCATTTTCAAAAAACTGCCGTGCAAAACCGGAATCCGAAACGGTCGCAAAAAGCCAGGGCCCCACATTAATCGCTTTCCTATTTGCAGTTATAAAGGCAGAGGTTTGCTCCGCTGGGTAGGTACTCATAAAAACAAACAAACAAACCGAAACACCCAACCAAACCAACCACCAATGACAGTCCCAAACGACGGCGTCTCCAAAGAAGCCGACGACGTCCCTGGCACGGAGGCCGAGTTGATTGAACTCGGCAACGCCGCCGAGTTGAACGAGGGCGCGGTGCGCAGCGGGAAGGTGAGGGGACCGTGGTCGCCGGAGGAGGACGCGGTGCTGACCCGGCTCGTGAGCAACTTCGGGGCGAGGAATTGGAGCCTGATCGCCCGCGGAATTCCCGGGCGGTCTGGAAAGTCGTGCCGGCTAAGGTGGTGTAACCAGCTCGACCCCTGCGTCAAGCGTAAACCCTTTTCTGGGGAAGAAGATCGTATAATAGTTTCAGCCCATGCTATCCATGGGAACAAATGGGCAGTAATTGCAAAGCTTCTTCCAGGTAGAACAGATAACGCAATCAAGAATCATTGGAATTCTACACTAAAGCGCAGGTGCTTTGATAAAGTAAGTTTTAATCCGGGACCTGGGGAAATGATGGAAGGTGACACCTTTGACAGAAAAAGGGCATCCTCAGAAGAAACCTTGTCAGTTGGGAATATCAGTTCATTCAAGACTTGTGAAGGTCAAGCAAAGGAGGGTTGTTGCGCTGCTGAGTCAAAAGAGCATTCTACTCTTCGTGCCGAATCAAGAGACCATCTGACTCTCCAGTCCACCCTTTGTCGTCCAGTGGCTCGTGTTAGTGCTTTTAGTGTTTATAACCGTCCAAGTGATCCAGCAAATGCTTCAGCTTTTTCAAGGACAGTCCCAAGTCATGGCCCTTTGGTCCCAACAACTAAACTAGATTTTGGGTTCGACAACTTCCTTGAAGGTGCATGTAATGAGCCTATGGTTCCTGAGCTCTGTAGCCATGGTTGCTGTGATCGAGTTGAGGGGCATTCTCAAGGCTCGTTGTTGGGGCCAGAGTTTGTTGAGTATGACGAGCCTCCGCCTTTCTCCAGCCACGAATTAATCTCCATTGCTACGGATTTGAACAAGATTGCATGGATTAAGAGTAGCCTTGAGAGTAGCACGATGAGTATGCCAGAGAACGTAGCAAGCCAAAGAGTCGTTCAAGCGGCTGCCACTACCTTGCAAATGGGAGTGCCAGCAAACAATCCGATGAATGAACATATGCGCTTTGAGGAAGGAAGAAACAAGTTGATGGGAATGATGACCGAAGTGCAATCAACCCAGGTGCCTAGACAAACTTTTGCAATGCCAACTGAAGTTGAGGGATTGAGCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000981 GO:0000988 GO:0000989 GO:0001067 GO:0001076 GO:0001101 GO:0001134 GO:0001135 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0006357 GO:0006950 GO:0006952 GO:0006970 GO:0007275 GO:0008150 GO:0009414 GO:0009415 GO:0009555 GO:0009605 GO:0009607 GO:0009617 GO:0009620 GO:0009628 GO:0009651 GO:0009719 GO:0009723 GO:0009725 GO:0009733 GO:0009737 GO:0009739 GO:0009751 GO:0009753 GO:0009889 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010038 GO:0010200 GO:0010243 GO:0010468 GO:0010556 GO:0010646 GO:0010647 GO:0010928 GO:0010929 GO:0014070 GO:0019219 GO:0019222 GO:0023051 GO:0023056 GO:0030154 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0033993 GO:0042221 GO:0042493 GO:0042742 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043565 GO:0044212 GO:0044424 GO:0044464 GO:0046677 GO:0046686 GO:0048229 GO:0048518 GO:0048522 GO:0048583 GO:0048584 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050832 GO:0050896 GO:0051171 GO:0051252 GO:0051704 GO:0051707 GO:0060255 GO:0065007 GO:0080090 GO:0097159 GO:0097305 GO:0098542 GO:0140110 GO:1901363 GO:1901698 GO:1901700 GO:1903506 GO:2000022 GO:2000031 GO:2000112 GO:2001023 GO:2001038 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Myb_DNA-binding

Protein Analysis

500

Amino Acids

54.99

Weight (kDa)

8.76

Isoelectric Point (pI)

46.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Myb_DNA-binding	PF00249	136 - 182	1.2e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	139 - 197	7.1e-15	Myb-like DNA-binding domain
Myb_DNA-binding	PF00249	188 - 232	2.9e-16	Myb-like DNA-binding domain
Myb_DNA-bind_6	PF13921	191 - 236	1.7e-06	Myb-like DNA-binding domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0011821)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G39880 AT3G55730
fragaria_vesca	FvH4_7g23750
malus_domestica	MD01G1144700.v1.1 MD07G1211300.v1.1
prunus_persica	Prupe.2G244100_v2.0.a1
pyrus_communis	pycom01g16430 pycom07g19480
rosa_chinensis	RchiOBHm_Chr1g0369061
rosa_laevigata	RLG00000027160
rosa_multiflora	Rmu_sc0004250.1_g000025 Rmu_sc0008155.1_g000001
rosa_roxburghii	Rroxscaffold_4G00288040
rosa_rugosa	Rorug01G0347700
rosa_samantha	Rh1AG354500 Rh1BG317800 Rh1CG332300 Rh1DG348700
rosa_wichuraiana	Rw1G031300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	201, 972
AarI	CACCTGC	1 cut(s)	696
AasI	GACNNNNNNGTC	3 cut(s)	107, 554, 922
AatII	GACGTC	1 cut(s)	327
Acc16I	TGCGCA	1 cut(s)	392
Acc36I	ACCTGC	1 cut(s)	696
AccB1I	GGYRCC	1 cut(s)	1450
AccB7I	CCANNNNNTGG	1 cut(s)	1028
AccII	CGCG	3 cut(s)	386, 434, 492
AclWI	GGATC	1 cut(s)	980
AcsI	RAATTY	2 cut(s)	495, 688
AcuI	CTGAAG	2 cut(s)	984, 1500
AcyI	GRCGYC	2 cut(s)	303, 324
AfaI	GTAC	1 cut(s)	232
AfiI	CCNNNNNNNGG	6 cut(s)	299, 334, 575, 576, 740, 1028
AflIII	ACRYGT	1 cut(s)	102
AjnI	CCWGG	5 cut(s)	163, 328, 652, 739, 1446
AjuI	GAANNNNNNNTTGG	2 cut(s)	1308, 1340
AloI	GAACNNNNNNTCC	2 cut(s)	802, 834
AluBI	AGCT	5 cut(s)	544, 646, 1004, 1114, 1497
AluI	AGCT	5 cut(s)	544, 646, 1004, 1114, 1497
Alw21I	GWGCWC	1 cut(s)	1116
Alw26I	GTCTC	3 cut(s)	3, 310, 900
AlwI	GGATC	1 cut(s)	980
Ama87I	CYCGRG	3 cut(s)	6, 94, 500
AoxI	GGCC	4 cut(s)	167, 339, 1030, 1172
ApaI	GGGCCC	1 cut(s)	171
ApeKI	GCWGC	3 cut(s)	393, 863, 1334
ApoI	RAATTY	2 cut(s)	495, 688
AseI	ATTAAT	2 cut(s)	177, 1223
AspLEI	GCGC	5 cut(s)	386, 393, 705, 863, 1392
AspS9I	GGNCC	7 cut(s)	167, 168, 410, 737, 1031, 1039, 1172
AsuC2I	CCSGG	6 cut(s)	95, 96, 445, 501, 502, 735
AsuHPI	GGTGA	2 cut(s)	415, 770
AvaI	CYCGRG	3 cut(s)	6, 94, 500
AvaII	GGWCC	3 cut(s)	410, 737, 1039
BaeGI	GKGCMC	1 cut(s)	171
BanI	GGYRCC	1 cut(s)	1450
BanII	GRGCYC	2 cut(s)	171, 1116
BauI	CACGAG	2 cut(s)	449, 948
BbsI	GAAGAC	1 cut(s)	60
Bbv12I	GWGCWC	1 cut(s)	1116
BbvI	GCAGC	3 cut(s)	405, 850, 1321
BccI	CCATC	3 cut(s)	745, 918, 1411
BceAI	ACGGC	2 cut(s)	112, 316
BcgI	CGANNNNNNTGC	2 cut(s)	1276, 1310
BciT130I	CCWGG	5 cut(s)	165, 330, 654, 741, 1448
BcnI	CCSGG	6 cut(s)	95, 96, 445, 501, 502, 735
BcoDI	GTCTC	3 cut(s)	3, 310, 900
BfaI	CTAG	3 cut(s)	1055, 1455, 1498
BfmI	CTRYAG	1 cut(s)	1117
BfuAI	ACCTGC	1 cut(s)	696
BisI	GCNGC	5 cut(s)	366, 394, 864, 1332, 1335
BlsI	GCNGC	5 cut(s)	367, 395, 865, 1333, 1336
Bme18I	GGWCC	3 cut(s)	410, 737, 1039
BmeT110I	CYCGRG	3 cut(s)	6, 94, 500
BmgT120I	GGNCC	7 cut(s)	167, 168, 410, 737, 1031, 1039, 1172
BmiI	GGNNCC	9 cut(s)	169, 170, 411, 479, 738, 1041, 1107, 1173, 1452
BmsI	GCATC	1 cut(s)	791
BoxI	GACNNNNGTC	1 cut(s)	415
BpiI	GAAGAC	1 cut(s)	60
BplI	GAGNNNNNCTC	2 cut(s)	201, 233
BpmI	CTGGAG	2 cut(s)	905, 1195
Bpu10I	CCTNAGC	2 cut(s)	527, 1110
BpuEI	CTTGAG	2 cut(s)	1140, 1295
BpuMI	CCSGG	6 cut(s)	95, 96, 445, 501, 502, 735
BsaHI	GRCGYC	2 cut(s)	303, 324
BsaI	GGTCTC	1 cut(s)	900
BsaWI	WCCGGW	1 cut(s)	137
BsaXI	ACNNNNNCTCC	6 cut(s)	41, 71, 290, 320, 329, 359
Bsc4I	CCNNNNNNNGG	6 cut(s)	299, 334, 575, 576, 740, 1028
Bse118I	RCCGGY	1 cut(s)	522
Bse1I	ACTGG	2 cut(s)	922, 941
Bse3DI	GCAATG	2 cut(s)	1230, 1476
BseBI	CCWGG	5 cut(s)	165, 330, 654, 741, 1448
BseGI	GGATG	1 cut(s)	782
BseLI	CCNNNNNNNGG	6 cut(s)	299, 334, 575, 576, 740, 1028
BseMI	GCAATG	2 cut(s)	1230, 1476
BseMII	CTCAG	3 cut(s)	801, 858, 1101
BseNI	ACTGG	2 cut(s)	922, 941
BseRI	GAGGAG	1 cut(s)	440
BseSI	GKGCMC	1 cut(s)	171
BseXI	GCAGC	3 cut(s)	405, 850, 1321
BseYI	CCCAGC	1 cut(s)	222
Bsh1236I	CGCG	3 cut(s)	386, 434, 492
Bsh1285I	CGRYCG	1 cut(s)	154
BshFI	GGCC	4 cut(s)	169, 341, 1032, 1174
BshNI	GGYRCC	1 cut(s)	1450
BsiEI	CGRYCG	1 cut(s)	154
BsiHKAI	GWGCWC	1 cut(s)	1116
BsiHKCI	CYCGRG	3 cut(s)	6, 94, 500
BsiSI	CCGG	7 cut(s)	95, 138, 422, 445, 501, 523, 734
BslFI	GGGAC	7 cut(s)	113, 275, 311, 423, 750, 1004, 1025
BslI	CCNNNNNNNGG	6 cut(s)	299, 334, 575, 576, 740, 1028
BsmAI	GTCTC	3 cut(s)	3, 310, 900
BsmBI	CGTCTC	1 cut(s)	310
BsmFI	GGGAC	7 cut(s)	113, 275, 311, 423, 750, 1004, 1025
BsmI	GAATGC	2 cut(s)	880, 1150
BsnI	GGCC	4 cut(s)	169, 341, 1032, 1174
Bso31I	GGTCTC	1 cut(s)	900
BsoBI	CYCGRG	3 cut(s)	6, 94, 500
Bsp120I	GGGCCC	1 cut(s)	167
Bsp1286I	GDGCHC	2 cut(s)	171, 1116
Bsp143I	GATC	4 cut(s)	483, 586, 985, 1135
Bsp19I	CCATGG	2 cut(s)	616, 1123
BspANI	GGCC	4 cut(s)	169, 341, 1032, 1174
BspCNI	CTCAG	3 cut(s)	800, 859, 1102
BspFNI	CGCG	3 cut(s)	386, 434, 492
BspLI	GGNNCC	9 cut(s)	169, 170, 411, 479, 738, 1041, 1107, 1173, 1452
BspMI	ACCTGC	1 cut(s)	696
BspPI	GGATC	1 cut(s)	980
BspT107I	GGYRCC	1 cut(s)	1450
BspTNI	GGTCTC	1 cut(s)	900
BsrDI	GCAATG	2 cut(s)	1230, 1476
BsrFI	RCCGGY	1 cut(s)	522
BsrI	ACTGG	2 cut(s)	922, 941
BssAI	RCCGGY	1 cut(s)	522
BssMI	GATC	4 cut(s)	483, 586, 985, 1135
BssNI	GRCGYC	2 cut(s)	303, 324
BssSI	CACGAG	2 cut(s)	449, 948
BssT1I	CCWWGG	2 cut(s)	616, 1123
Bst2BI	CACGAG	2 cut(s)	449, 948
Bst2UI	CCWGG	5 cut(s)	165, 330, 654, 741, 1448
Bst4CI	ACNGT	5 cut(s)	152, 289, 414, 977, 1018
Bst6I	CTCTTC	1 cut(s)	894
BstACI	GRCGYC	2 cut(s)	303, 324
BstAPI	GCANNNNNTGC	1 cut(s)	638
BstC8I	GCNNGC	4 cut(s)	490, 524, 1312, 1362
BstDEI	CTNAG	4 cut(s)	527, 787, 867, 1110
BstDSI	CCRYGG	4 cut(s)	413, 490, 616, 1123
BstF5I	GGATG	1 cut(s)	782
BstFNI	CGCG	3 cut(s)	386, 434, 492
BstHHI	GCGC	5 cut(s)	386, 393, 705, 863, 1392
BstKTI	GATC	4 cut(s)	486, 589, 988, 1138
BstMAI	GTCTC	3 cut(s)	3, 310, 900
BstMBI	GATC	4 cut(s)	483, 586, 985, 1135
BstMCI	CGRYCG	1 cut(s)	154
BstMWI	GCNNNNNNNGC	4 cut(s)	390, 445, 638, 1128
BstNI	CCWGG	5 cut(s)	165, 330, 654, 741, 1448
BstNSI	RCATGY	1 cut(s)	1092
BstPAI	GACNNNNGTC	1 cut(s)	415
BstSFI	CTRYAG	1 cut(s)	1117
BstSLI	GKGCMC	1 cut(s)	171
BstUI	CGCG	3 cut(s)	386, 434, 492
BstV1I	GCAGC	3 cut(s)	405, 850, 1321
BstV2I	GAAGAC	1 cut(s)	60
BsuRI	GGCC	4 cut(s)	169, 341, 1032, 1174
BtgI	CCRYGG	4 cut(s)	413, 490, 616, 1123
BtsCI	GGATG	1 cut(s)	782
BtsIMutI	CAGTG	1 cut(s)	948
BveI	ACCTGC	1 cut(s)	696
Cac8I	GCNNGC	4 cut(s)	490, 524, 1312, 1362
CfoI	GCGC	5 cut(s)	386, 393, 705, 863, 1392
Cfr10I	RCCGGY	1 cut(s)	522
Cfr13I	GGNCC	7 cut(s)	167, 168, 410, 737, 1031, 1039, 1172
Cfr42I	CCGCGG	1 cut(s)	493
Cfr9I	CCCGGG	2 cut(s)	94, 500
CseI	GACGC	3 cut(s)	292, 440, 544
Csp6I	GTAC	1 cut(s)	231
CviAII	CATG	6 cut(s)	608, 617, 1028, 1089, 1124, 1257
CviQI	GTAC	1 cut(s)	231
DdeI	CTNAG	4 cut(s)	527, 787, 867, 1110
DpnI	GATC	4 cut(s)	485, 588, 987, 1137
DpnII	GATC	4 cut(s)	483, 586, 985, 1135
DrdI	GACNNNNNNGTC	3 cut(s)	107, 554, 922
DseDI	GACNNNNNNGTC	3 cut(s)	107, 554, 922
Eam1104I	CTCTTC	1 cut(s)	894
EarI	CTCTTC	1 cut(s)	894
EciI	GGCGGA	1 cut(s)	1191
Ecl136II	GAGCTC	1 cut(s)	1114
Eco130I	CCWWGG	2 cut(s)	616, 1123
Eco24I	GRGCYC	2 cut(s)	171, 1116
Eco31I	GGTCTC	1 cut(s)	900
Eco47I	GGWCC	3 cut(s)	410, 737, 1039
Eco53kI	GAGCTC	1 cut(s)	1114
Eco57I	CTGAAG	2 cut(s)	984, 1500
Eco88I	CYCGRG	3 cut(s)	6, 94, 500
EcoICRI	GAGCTC	1 cut(s)	1114
EcoO109I	RGGNCCY	3 cut(s)	167, 168, 737
EcoRI	GAATTC	2 cut(s)	495, 688
EcoRII	CCWGG	5 cut(s)	163, 328, 652, 739, 1446
EcoT14I	CCWWGG	2 cut(s)	616, 1123
EcoT38I	GRGCYC	2 cut(s)	171, 1116
ErhI	CCWWGG	2 cut(s)	616, 1123
Esp3I	CGTCTC	1 cut(s)	310
FaeI	CATG	6 cut(s)	611, 620, 1031, 1092, 1127, 1260
FaqI	GGGAC	7 cut(s)	113, 275, 311, 423, 750, 1004, 1025
FatI	CATG	6 cut(s)	607, 616, 1027, 1088, 1123, 1256
FauI	CCCGC	2 cut(s)	389, 497
FauNDI	CATATG	1 cut(s)	1386
Fnu4HI	GCNGC	5 cut(s)	366, 394, 864, 1332, 1335
FokI	GGATG	1 cut(s)	769
FriOI	GRGCYC	2 cut(s)	171, 1116
Fsp4HI	GCNGC	5 cut(s)	366, 394, 864, 1332, 1335
FspBI	CTAG	3 cut(s)	1055, 1455, 1498
FspI	TGCGCA	1 cut(s)	392
GlaI	GCGC	5 cut(s)	385, 392, 704, 862, 1391
GluI	GCNGC	5 cut(s)	366, 394, 864, 1332, 1335
GsaI	CCCAGC	1 cut(s)	226
GsuI	CTGGAG	2 cut(s)	905, 1195
HaeIII	GGCC	4 cut(s)	169, 341, 1032, 1174
HapII	CCGG	7 cut(s)	95, 138, 422, 445, 501, 523, 734
HgaI	GACGC	3 cut(s)	292, 440, 544
HhaI	GCGC	5 cut(s)	386, 393, 705, 863, 1392
Hin1I	GRCGYC	2 cut(s)	303, 324
Hin1II	CATG	6 cut(s)	611, 620, 1031, 1092, 1127, 1260
Hin6I	GCGC	5 cut(s)	384, 391, 703, 861, 1390
HinP1I	GCGC	5 cut(s)	384, 391, 703, 861, 1390
HincII	GTYRAC	1 cut(s)	47
HindII	GTYRAC	1 cut(s)	47
HindIII	AAGCTT	1 cut(s)	644
HinfI	GANTC	9 cut(s)	4, 11, 56, 141, 679, 869, 899, 916, 1320
HpaII	CCGG	7 cut(s)	95, 138, 422, 445, 501, 523, 734
HphI	GGTGA	2 cut(s)	415, 770
Hpy166II	GTNNAC	3 cut(s)	47, 566, 927
Hpy188I	TCNGA	4 cut(s)	146, 790, 915, 1374
Hpy188III	TCNNGA	7 cut(s)	8, 451, 510, 676, 826, 903, 1109
Hpy8I	GTNNAC	3 cut(s)	47, 566, 927
Hpy99I	CGWCG	5 cut(s)	82, 85, 302, 323, 326
HpyAV	CCTTC	5 cut(s)	394, 749, 830, 1076, 1394
HpyCH4III	ACNGT	5 cut(s)	152, 289, 414, 977, 1018
HpyCH4IV	ACGT	4 cut(s)	83, 104, 324, 1305
HpyCH4V	TGCA	8 cut(s)	132, 195, 641, 1088, 1256, 1348, 1438, 1469
HpyF10VI	GCNNNNNNNGC	4 cut(s)	390, 445, 638, 1128
HpyF3I	CTNAG	4 cut(s)	527, 787, 867, 1110
HpySE526I	ACGT	4 cut(s)	83, 104, 324, 1305
Hsp92I	GRCGYC	2 cut(s)	303, 324
Hsp92II	CATG	6 cut(s)	611, 620, 1031, 1092, 1127, 1260
HspAI	GCGC	5 cut(s)	384, 391, 703, 861, 1390
KroI	GCCGGC	1 cut(s)	522
KroNI	GCCGGC	1 cut(s)	524
KspI	CCGCGG	1 cut(s)	493
Kzo9I	GATC	4 cut(s)	483, 586, 985, 1135
LmnI	GCTCC	2 cut(s)	222, 477
Lsp1109I	GCAGC	3 cut(s)	405, 850, 1321
LweI	GCATC	1 cut(s)	791
MaeI	CTAG	3 cut(s)	1055, 1455, 1498
MaeII	ACGT	4 cut(s)	83, 104, 324, 1305
MaeIII	GTNAC	2 cut(s)	536, 758
MalI	GATC	4 cut(s)	485, 588, 987, 1137
MboI	GATC	4 cut(s)	483, 586, 985, 1135
MboII	GAAGA	7 cut(s)	65, 593, 596, 641, 803, 881, 1416
MhlI	GDGCHC	2 cut(s)	171, 1116
MluCI	AATT	5 cut(s)	472, 495, 636, 688, 1220
MlyI	GAGTC	5 cut(s)	5, 50, 878, 910, 1329
MroNI	GCCGGC	1 cut(s)	522
MseI	TTAA	4 cut(s)	177, 729, 1223, 1263
MspA1I	CMGCKG	3 cut(s)	222, 396, 492
MspI	CCGG	7 cut(s)	95, 138, 422, 445, 501, 523, 734
Mva1269I	GAATGC	2 cut(s)	880, 1150
MvaI	CCWGG	5 cut(s)	165, 330, 654, 741, 1448
MvnI	CGCG	3 cut(s)	386, 434, 492
MwoI	GCNNNNNNNGC	4 cut(s)	390, 445, 638, 1128
NaeI	GCCGGC	1 cut(s)	524
NciI	CCSGG	6 cut(s)	95, 96, 445, 501, 502, 735
NcoI	CCATGG	2 cut(s)	616, 1123
NdeI	CATATG	1 cut(s)	1386
NdeII	GATC	4 cut(s)	483, 586, 985, 1135
NgoMIV	GCCGGC	1 cut(s)	522
NlaIII	CATG	6 cut(s)	611, 620, 1031, 1092, 1127, 1260
NlaIV	GGNNCC	9 cut(s)	169, 170, 411, 479, 738, 1041, 1107, 1173, 1452
NmeAIII	GCCGAG	3 cut(s)	336, 367, 394
NmuCI	GTSAC	1 cut(s)	758
NsbI	TGCGCA	1 cut(s)	392
NspI	RCATGY	1 cut(s)	1092
PaeR7I	CTCGAG	1 cut(s)	6
PaqCI	CACCTGC	1 cut(s)	696
PcsI	WCGNNNNNNNCGW	1 cut(s)	552
PctI	GAATGC	2 cut(s)	880, 1150
PdiI	GCCGGC	1 cut(s)	524
PfeI	GAWTC	3 cut(s)	141, 679, 899
PflFI	GACNNNGTC	2 cut(s)	302, 323
PflMI	CCANNNNNTGG	1 cut(s)	1028
PfoI	TCCNGGA	1 cut(s)	733
PkrI	GCNGC	5 cut(s)	367, 395, 865, 1333, 1336
PleI	GAGTC	5 cut(s)	5, 50, 877, 910, 1328
PpsI	GAGTC	5 cut(s)	5, 50, 877, 910, 1328
PpuMI	RGGWCCY	1 cut(s)	737
PshAI	GACNNNNGTC	1 cut(s)	415
PshBI	ATTAAT	2 cut(s)	177, 1223
PsiI	TTATAA	2 cut(s)	201, 972
Psp124BI	GAGCTC	1 cut(s)	1116
Psp5II	RGGWCCY	1 cut(s)	737
Psp6I	CCWGG	5 cut(s)	163, 328, 652, 739, 1446
PspFI	CCCAGC	1 cut(s)	222
PspGI	CCWGG	5 cut(s)	163, 328, 652, 739, 1446
PspN4I	GGNNCC	9 cut(s)	169, 170, 411, 479, 738, 1041, 1107, 1173, 1452
PspOMI	GGGCCC	1 cut(s)	167
PspPI	GGNCC	7 cut(s)	167, 168, 410, 737, 1031, 1039, 1172
PspPPI	RGGWCCY	1 cut(s)	737
PsyI	GACNNNGTC	2 cut(s)	302, 323
RsaI	GTAC	1 cut(s)	232
RsaNI	GTAC	1 cut(s)	231
SacI	GAGCTC	1 cut(s)	1116
SacII	CCGCGG	1 cut(s)	493
SaqAI	TTAA	4 cut(s)	177, 729, 1223, 1263
SatI	GCNGC	5 cut(s)	366, 394, 864, 1332, 1335
Sau3AI	GATC	4 cut(s)	483, 586, 985, 1135
Sau96I	GGNCC	7 cut(s)	167, 168, 410, 737, 1031, 1039, 1172
SchI	GAGTC	5 cut(s)	5, 50, 878, 910, 1329
SduI	GDGCHC	2 cut(s)	171, 1116
SfaNI	GCATC	1 cut(s)	791
SfcI	CTRYAG	1 cut(s)	1117
Sfr274I	CTCGAG	1 cut(s)	6
Sfr303I	CCGCGG	1 cut(s)	493
SgrBI	CCGCGG	1 cut(s)	493
SinI	GGWCC	3 cut(s)	410, 737, 1039
SlaI	CTCGAG	1 cut(s)	6
SmaI	CCCGGG	2 cut(s)	96, 502
SmlI	CTYRAG	3 cut(s)	6, 1155, 1274
SmoI	CTYRAG	3 cut(s)	6, 1155, 1274
Sse9I	AATT	5 cut(s)	472, 495, 636, 688, 1220
SspMI	CTAG	3 cut(s)	1055, 1455, 1498
SstI	GAGCTC	1 cut(s)	1116
StyI	CCWWGG	2 cut(s)	616, 1123
TaaI	ACNGT	5 cut(s)	152, 289, 414, 977, 1018
TaiI	ACGT	4 cut(s)	86, 107, 327, 1308
TaqI	TCGA	4 cut(s)	7, 546, 1068, 1138
TaqII	GACCGA	1 cut(s)	1445
TasI	AATT	5 cut(s)	472, 495, 636, 688, 1220
TauI	GCSGC	2 cut(s)	368, 1334
TfiI	GAWTC	3 cut(s)	141, 679, 899
Tru1I	TTAA	4 cut(s)	177, 729, 1223, 1263
Tru9I	TTAA	4 cut(s)	177, 729, 1223, 1263
TscAI	CASTG	1 cut(s)	948
TseFI	GTSAC	1 cut(s)	758
TseI	GCWGC	3 cut(s)	393, 863, 1334
Tsp45I	GTSAC	1 cut(s)	758
TspDTI	ATGAA	3 cut(s)	810, 1391, 1395
TspGWI	ACGGA	2 cut(s)	350, 1253
TspMI	CCCGGG	2 cut(s)	94, 500
TspRI	CASTG	1 cut(s)	948
Tth111I	GACNNNGTC	2 cut(s)	302, 323
Van91I	CCANNNNNTGG	1 cut(s)	1028
VpaK11BI	GGWCC	3 cut(s)	410, 737, 1039
VspI	ATTAAT	2 cut(s)	177, 1223
XapI	RAATTY	2 cut(s)	495, 688
XceI	RCATGY	1 cut(s)	1092
XcmI	CCANNNNNNNNNTGG	1 cut(s)	614
XhoI	CTCGAG	1 cut(s)	6
XmaI	CCCGGG	2 cut(s)	94, 500
XspI	CTAG	3 cut(s)	1055, 1455, 1498
ZraI	GACGTC	1 cut(s)	325

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.