pycom07g25870

Dihydrofolate synthetase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr7
Physical Location & Seq
Forward (+)
26046099 .. 26049600
3502 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom07g25870.3

Sequence Viewer

Length: 1443 bp
ATGCGACTGTGCGAGGCGATGAATTTCCCTCAACTGAGCGGGTTTTCCATCACTTTTTCCCGAGAAACAAACGGAAAACTAGAAAGAATGAAACTTTTCCAACATCTCAGACAATACTCCATCTCTACTCGCAGGAAAACCCTAATTTCTTCAATTGGAGTTGGGCTTCTGCGGAATGTGGGGCCCGAACGATGCTTTTGCACGCGCTCAGAGGACTCGGAGCTGAAGGGATTGCTGGAATACATGGATTCTCTGAAGAACTACGAGAAATTGGGCGTACCCAAAGACGCGGGTACGGATTCGGAAGACGGGTTCGATCTGGGTCGGATGCGACGGTTGCTGGAGCTACTGGGTAATCCTCACTCCAAGTTCAAGGCGGTTCACATTGCCGGGACGAAGGGGAAAGGATCAACGGCTGCATTTCTCTCCAACATGTTGAGGGCAGAAGGTTATTCTGTTGGTTGTTATACTAGCCCCCACATTCAGACTATAAGGGAACGTATATCAGTGGGAAGGTTTGCTGAACCAGTGTCAGCGAAGGCGTTGAGTTCTCTTTTTGATAGGGTTAAGAAGATTCTGGACCGTGCAATAGAAGTTGAAAATGGGCGTACAAGTCATTTTGAGGTTCTCACTGCTTTGGCATTCACATTGTTTGCTCAGGAGAATGTTGACATTGCGGTTATTGAGGCTGGGTTGGGGGGGGCACGTGATGCAACTAATGTCATTTGTAGCTCCAAACTTGCCACATCGATCATTACTACAATAGGTGAGGAACATTTGGCTGCACTTGGGGGTTCTTTGGAAAGCATTGCAATGGCGAAGTCTGGAATCATTAAACATGGCCGCCCAGTGGTTCTGGGTGGTCCATTCCTTCCACATATTGACCAAATTCTTCGTGATAAAGCATTGTTGATGAGTTCCCCTATGGTATTAGCATATGATACTGGAAATAAAAGTAAGATAAATGGTGTTAGCATGCTCAATGGCAGACCATTCCAATCTTGTGATATAGTCATACGAGTTGAAAGGGACTTGCAGCTGTTCATTGAGTTATTGGATGTGAAACTATACATGCTTGGAACTCACCAACTTCAGAATGCAGCAACTGCTACTTGTGCAGCACTATGTCTCCGCAACTTAGGATGGAGAATTTCAGACGGATCCATTAGAACTGGTTTAGAGCAAACAAGCTTGCTTGGAAGAAGTCAGTTTCTAACATCAAAAGAAGCCCAGGCATTAGGATTATCTGGAGCAACAATATTGCTTGACGGAGCCCACACCAAAGATTCTGCAAGAGCGTTGATGGACACTATAAAGATGACATTTCCAGAGGCAGGACTGACTCTTGTGGTTGCAATGGCTAGTGACAAAGATCGATCTAGGTTTTGCAAAAGAGTGCCTTTCAGGTGGGCATGTAGAGGGTGTCATTTTGACCGAAGCTAA

Protein Analysis

481

Amino Acids

52.6

Weight (kDa)

9.25

Isoelectric Point (pI)

43.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012917)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 39
AccII CGCG 2 cut(s) 205, 290
AciI CCGC 7 cut(s) 39, 172, 290, 377, 677, 844, 1132
AclWI GGATC 3 cut(s) 415, 1155, 1168
AcoI YGGCCR 1 cut(s) 841
AcsI RAATTY 3 cut(s) 22, 888, 1149
AcuI CTGAAG 3 cut(s) 245, 275, 1076
AcvI CACGTG 1 cut(s) 707
AfaI GTAC 3 cut(s) 279, 295, 610
AfiI CCNNNNNNNGG 2 cut(s) 850, 1334
AflIII ACRYGT 1 cut(s) 432
AgsI TTSAA 4 cut(s) 153, 373, 599, 1025
AjnI CCWGG 1 cut(s) 1230
AloI GAACNNNNNNTCC 2 cut(s) 296, 328
AluBI AGCT 6 cut(s) 223, 346, 732, 1039, 1191, 1440
AluI AGCT 6 cut(s) 223, 346, 732, 1039, 1191, 1440
Alw26I GTCTC 1 cut(s) 1133
AlwI GGATC 3 cut(s) 415, 1155, 1168
AlwNI CAGNNNCTG 1 cut(s) 1106
Ama87I CYCGRG 1 cut(s) 60
AoxI GGCC 2 cut(s) 182, 841
ApaI GGGCCC 1 cut(s) 186
ApeKI GCWGC 5 cut(s) 416, 782, 1036, 1100, 1118
ApoI RAATTY 3 cut(s) 22, 888, 1149
Asp700I GAANNNNTTC 1 cut(s) 95
AspLEI GCGC 1 cut(s) 207
AspS9I GGNCC 4 cut(s) 182, 183, 580, 863
AsuC2I CCSGG 1 cut(s) 391
AsuHPI GGTGA 2 cut(s) 779, 1076
AvaI CYCGRG 1 cut(s) 60
AvaII GGWCC 2 cut(s) 580, 863
BaeGI GKGCMC 2 cut(s) 186, 706
BamHI GGATCC 1 cut(s) 1160
BanII GRGCYC 2 cut(s) 186, 1276
BbrPI CACGTG 1 cut(s) 707
BbsI GAAGAC 1 cut(s) 312
BbvI GCAGC 5 cut(s) 403, 769, 1048, 1112, 1130
BccI CCATC 4 cut(s) 56, 128, 1137, 1297
BceAI ACGGC 1 cut(s) 429
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BciT130I CCWGG 1 cut(s) 1232
BcnI CCSGG 1 cut(s) 391
BcoDI GTCTC 1 cut(s) 1133
BfaI CTAG 4 cut(s) 80, 471, 1362, 1380
BisI GCNGC 6 cut(s) 417, 783, 844, 1037, 1101, 1119
BlsI GCNGC 6 cut(s) 418, 784, 845, 1038, 1102, 1120
Bme1390I CCNGG 2 cut(s) 391, 1232
Bme18I GGWCC 2 cut(s) 580, 863
BmeT110I CYCGRG 1 cut(s) 60
BmgT120I GGNCC 4 cut(s) 182, 183, 580, 863
BmiI GGNNCC 4 cut(s) 183, 184, 1162, 1273
BmrFI CCNGG 2 cut(s) 391, 1232
BmrI ACTGGG 2 cut(s) 359, 842
BmsI GCATC 3 cut(s) 182, 318, 700
BmuI ACTGGG 2 cut(s) 359, 842
BpiI GAAGAC 1 cut(s) 312
BpmI CTGGAG 2 cut(s) 362, 1269
Bpu10I CCTNAGC 1 cut(s) 657
BpuMI CCSGG 1 cut(s) 391
Bsa29I ATCGAT 2 cut(s) 749, 1375
BsaAI YACGTR 1 cut(s) 707
BsaJI CCNNGG 1 cut(s) 1230
BsaXI ACNNNNNCTCC 2 cut(s) 1113, 1143
Bsc4I CCNNNNNNNGG 2 cut(s) 850, 1334
Bse1I ACTGG 5 cut(s) 354, 527, 848, 949, 1177
Bse3DI GCAATG 5 cut(s) 384, 672, 807, 819, 1362
BseBI CCWGG 1 cut(s) 1232
BseCI ATCGAT 2 cut(s) 749, 1375
BseDI CCNNGG 1 cut(s) 1230
BseGI GGATG 3 cut(s) 333, 1063, 1148
BseLI CCNNNNNNNGG 2 cut(s) 850, 1334
BseMI GCAATG 5 cut(s) 384, 672, 807, 819, 1362
BseMII CTCAG 4 cut(s) 26, 121, 222, 671
BseNI ACTGG 5 cut(s) 354, 527, 848, 949, 1177
BseSI GKGCMC 2 cut(s) 186, 706
BseXI GCAGC 5 cut(s) 403, 769, 1048, 1112, 1130
BseYI CCCAGC 1 cut(s) 689
BsgI GTGCAG 2 cut(s) 768, 1137
Bsh1236I CGCG 2 cut(s) 205, 290
BshFI GGCC 2 cut(s) 184, 843
BshVI ATCGAT 2 cut(s) 749, 1375
BsiHKCI CYCGRG 1 cut(s) 60
BsiSI CCGG 1 cut(s) 390
BslFI GGGAC 2 cut(s) 406, 1043
BslI CCNNNNNNNGG 2 cut(s) 850, 1334
BsmAI GTCTC 1 cut(s) 1133
BsmFI GGGAC 2 cut(s) 406, 1043
BsmI GAATGC 2 cut(s) 641, 1102
BsnI GGCC 2 cut(s) 184, 843
BsoBI CYCGRG 1 cut(s) 60
Bsp120I GGGCCC 1 cut(s) 182
Bsp1286I GDGCHC 3 cut(s) 186, 706, 1276
Bsp143I GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
BspACI CCGC 7 cut(s) 39, 172, 290, 377, 677, 844, 1132
BspANI GGCC 2 cut(s) 184, 843
BspCNI CTCAG 4 cut(s) 27, 120, 221, 670
BspDI ATCGAT 2 cut(s) 749, 1375
BspFNI CGCG 2 cut(s) 205, 290
BspLI GGNNCC 4 cut(s) 183, 184, 1162, 1273
BspPI GGATC 3 cut(s) 415, 1155, 1168
BsrBI CCGCTC 1 cut(s) 39
BsrDI GCAATG 5 cut(s) 384, 672, 807, 819, 1362
BsrI ACTGG 5 cut(s) 354, 527, 848, 949, 1177
BssECI CCNNGG 1 cut(s) 1230
BssMI GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
Bst2UI CCWGG 1 cut(s) 1232
Bst4CI ACNGT 3 cut(s) 9, 336, 584
BstAPI GCANNNNNTGC 2 cut(s) 710, 1106
BstBAI YACGTR 1 cut(s) 707
BstC8I GCNNGC 3 cut(s) 203, 977, 1193
BstDEI CTNAG 5 cut(s) 35, 107, 208, 657, 1138
BstF5I GGATG 3 cut(s) 333, 1063, 1148
BstFNI CGCG 2 cut(s) 205, 290
BstHHI GCGC 1 cut(s) 207
BstKTI GATC 6 cut(s) 319, 410, 753, 1163, 1375, 1379
BstMAI GTCTC 1 cut(s) 1133
BstMBI GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
BstMWI GCNNNNNNNGC 4 cut(s) 337, 710, 1106, 1115
BstNI CCWGG 1 cut(s) 1232
BstNSI RCATGY 4 cut(s) 436, 979, 1075, 1416
BstSCI CCNGG 2 cut(s) 389, 1230
BstSLI GKGCMC 2 cut(s) 186, 706
BstUI CGCG 2 cut(s) 205, 290
BstV1I GCAGC 5 cut(s) 403, 769, 1048, 1112, 1130
BstV2I GAAGAC 1 cut(s) 312
BstX2I RGATCY 1 cut(s) 1160
BstYI RGATCY 1 cut(s) 1160
Bsu15I ATCGAT 2 cut(s) 749, 1375
BsuRI GGCC 2 cut(s) 184, 843
BsuTUI ATCGAT 2 cut(s) 749, 1375
BtgZI GCGATG 1 cut(s) 32
BtsCI GGATG 3 cut(s) 333, 1063, 1148
BtsI GCAGTG 1 cut(s) 630
BtsIMutI CAGTG 4 cut(s) 513, 534, 630, 855
Cac8I GCNNGC 3 cut(s) 203, 977, 1193
CaiI CAGNNNCTG 1 cut(s) 1106
CfoI GCGC 1 cut(s) 207
Cfr13I GGNCC 4 cut(s) 182, 183, 580, 863
ClaI ATCGAT 2 cut(s) 749, 1375
CseI GACGC 1 cut(s) 296
Csp6I GTAC 3 cut(s) 278, 294, 609
CviAII CATG 6 cut(s) 244, 433, 839, 976, 1072, 1413
CviQI GTAC 3 cut(s) 278, 294, 609
DdeI CTNAG 5 cut(s) 35, 107, 208, 657, 1138
DpnI GATC 6 cut(s) 318, 409, 752, 1162, 1374, 1378
DpnII GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
EaeI YGGCCR 1 cut(s) 841
Eco24I GRGCYC 2 cut(s) 186, 1276
Eco47I GGWCC 2 cut(s) 580, 863
Eco57I CTGAAG 3 cut(s) 245, 275, 1076
Eco72I CACGTG 1 cut(s) 707
Eco88I CYCGRG 1 cut(s) 60
EcoO109I RGGNCCY 1 cut(s) 182
EcoRII CCWGG 1 cut(s) 1230
EcoT38I GRGCYC 2 cut(s) 186, 1276
FaeI CATG 6 cut(s) 247, 436, 842, 979, 1075, 1416
FalI AAGNNNNNCTT 2 cut(s) 1384, 1416
FaqI GGGAC 2 cut(s) 406, 1043
FatI CATG 6 cut(s) 243, 432, 838, 975, 1071, 1412
FauI CCCGC 2 cut(s) 32, 283
FauNDI CATATG 1 cut(s) 937
Fnu4HI GCNGC 6 cut(s) 417, 783, 844, 1037, 1101, 1119
FokI GGATG 3 cut(s) 340, 1070, 1155
FriOI GRGCYC 2 cut(s) 186, 1276
Fsp4HI GCNGC 6 cut(s) 417, 783, 844, 1037, 1101, 1119
FspBI CTAG 4 cut(s) 80, 471, 1362, 1380
GlaI GCGC 1 cut(s) 206
GluI GCNGC 6 cut(s) 417, 783, 844, 1037, 1101, 1119
GsaI CCCAGC 1 cut(s) 693
GsuI CTGGAG 2 cut(s) 362, 1269
HaeIII GGCC 2 cut(s) 184, 843
HapII CCGG 1 cut(s) 390
HgaI GACGC 1 cut(s) 296
HhaI GCGC 1 cut(s) 207
Hin1II CATG 6 cut(s) 247, 436, 842, 979, 1075, 1416
Hin6I GCGC 1 cut(s) 205
HinP1I GCGC 1 cut(s) 205
HincII GTYRAC 1 cut(s) 670
HindII GTYRAC 1 cut(s) 670
HindIII AAGCTT 1 cut(s) 1189
HinfI GANTC 7 cut(s) 215, 248, 299, 574, 828, 1286, 1342
HpaII CCGG 1 cut(s) 390
HphI GGTGA 2 cut(s) 779, 1076
Hpy166II GTNNAC 2 cut(s) 382, 670
Hpy188I TCNGA 9 cut(s) 110, 211, 220, 255, 304, 327, 486, 1095, 1156
Hpy188III TCNNGA 7 cut(s) 60, 578, 659, 825, 896, 1248, 1328
Hpy8I GTNNAC 2 cut(s) 382, 670
Hpy99I CGWCG 1 cut(s) 336
HpyAV CCTTC 6 cut(s) 220, 391, 440, 507, 532, 881
HpyCH4III ACNGT 3 cut(s) 9, 336, 584
HpyCH4IV ACGT 2 cut(s) 499, 706
HpyF10VI GCNNNNNNNGC 4 cut(s) 337, 710, 1106, 1115
HpyF3I CTNAG 5 cut(s) 35, 107, 208, 657, 1138
HpySE526I ACGT 2 cut(s) 499, 706
Hsp92II CATG 6 cut(s) 247, 436, 842, 979, 1075, 1416
HspAI GCGC 1 cut(s) 205
Kzo9I GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
LmnI GCTCC 5 cut(s) 220, 343, 737, 1250, 1271
Lsp1109I GCAGC 5 cut(s) 403, 769, 1048, 1112, 1130
LweI GCATC 3 cut(s) 182, 318, 700
MaeI CTAG 4 cut(s) 80, 471, 1362, 1380
MaeII ACGT 2 cut(s) 499, 706
MaeIII GTNAC 1 cut(s) 1364
MalI GATC 6 cut(s) 318, 409, 752, 1162, 1374, 1378
MbiI CCGCTC 1 cut(s) 39
MboI GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
MboII GAAGA 6 cut(s) 141, 268, 317, 583, 884, 1212
MfeI CAATTG 1 cut(s) 153
MflI RGATCY 1 cut(s) 1160
MhlI GDGCHC 3 cut(s) 186, 706, 1276
MluCI AATT 6 cut(s) 22, 144, 153, 269, 888, 1149
MlyI GAGTC 2 cut(s) 209, 1336
MmeI TCCRAC 3 cut(s) 124, 305, 453
MroXI GAANNNNTTC 1 cut(s) 95
MseI TTAA 2 cut(s) 567, 834
MslI CAYNNNNRTG 1 cut(s) 812
MspA1I CMGCKG 1 cut(s) 1039
MspI CCGG 1 cut(s) 390
MspR9I CCNGG 2 cut(s) 391, 1232
MunI CAATTG 1 cut(s) 153
Mva1269I GAATGC 2 cut(s) 641, 1102
MvaI CCWGG 1 cut(s) 1232
MvnI CGCG 2 cut(s) 205, 290
MwoI GCNNNNNNNGC 4 cut(s) 337, 710, 1106, 1115
NciI CCSGG 1 cut(s) 391
NdeI CATATG 1 cut(s) 937
NdeII GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
NlaIII CATG 6 cut(s) 247, 436, 842, 979, 1075, 1416
NlaIV GGNNCC 4 cut(s) 183, 184, 1162, 1273
NmuCI GTSAC 1 cut(s) 1364
NspI RCATGY 4 cut(s) 436, 979, 1075, 1416
PaeI GCATGC 1 cut(s) 979
PciI ACATGT 1 cut(s) 432
PctI GAATGC 2 cut(s) 641, 1102
PdmI GAANNNNTTC 1 cut(s) 95
PfeI GAWTC 5 cut(s) 248, 299, 574, 828, 1286
PkrI GCNGC 6 cut(s) 418, 784, 845, 1038, 1102, 1120
PleI GAGTC 2 cut(s) 209, 1336
PmaCI CACGTG 1 cut(s) 707
PmlI CACGTG 1 cut(s) 707
PpsI GAGTC 2 cut(s) 209, 1336
Ppu21I YACGTR 1 cut(s) 707
PscI ACATGT 1 cut(s) 432
Psp6I CCWGG 1 cut(s) 1230
PspCI CACGTG 1 cut(s) 707
PspFI CCCAGC 1 cut(s) 689
PspGI CCWGG 1 cut(s) 1230
PspN4I GGNNCC 4 cut(s) 183, 184, 1162, 1273
PspOMI GGGCCC 1 cut(s) 182
PspPI GGNCC 4 cut(s) 182, 183, 580, 863
PstNI CAGNNNCTG 1 cut(s) 1106
PsuI RGATCY 1 cut(s) 1160
PvuII CAGCTG 1 cut(s) 1039
RsaI GTAC 3 cut(s) 279, 295, 610
RsaNI GTAC 3 cut(s) 278, 294, 609
RseI CAYNNNNRTG 1 cut(s) 812
SaqAI TTAA 2 cut(s) 567, 834
SatI GCNGC 6 cut(s) 417, 783, 844, 1037, 1101, 1119
Sau3AI GATC 6 cut(s) 316, 407, 750, 1160, 1372, 1376
Sau96I GGNCC 4 cut(s) 182, 183, 580, 863
SchI GAGTC 2 cut(s) 209, 1336
ScrFI CCNGG 2 cut(s) 391, 1232
SduI GDGCHC 3 cut(s) 186, 706, 1276
SfaNI GCATC 3 cut(s) 182, 318, 700
SinI GGWCC 2 cut(s) 580, 863
SmiMI CAYNNNNRTG 1 cut(s) 812
SphI GCATGC 1 cut(s) 979
Sse9I AATT 6 cut(s) 22, 144, 153, 269, 888, 1149
SsiI CCGC 7 cut(s) 39, 172, 290, 377, 677, 844, 1132
SspI AATATT 1 cut(s) 1260
SspMI CTAG 4 cut(s) 80, 471, 1362, 1380
StyD4I CCNGG 2 cut(s) 389, 1230
TaaI ACNGT 3 cut(s) 9, 336, 584
TaiI ACGT 2 cut(s) 502, 709
TaqI TCGA 3 cut(s) 315, 749, 1375
TasI AATT 6 cut(s) 22, 144, 153, 269, 888, 1149
TauI GCSGC 1 cut(s) 846
TfiI GAWTC 5 cut(s) 248, 299, 574, 828, 1286
Tru1I TTAA 2 cut(s) 567, 834
Tru9I TTAA 2 cut(s) 567, 834
TscAI CASTG 4 cut(s) 513, 534, 637, 855
TseFI GTSAC 1 cut(s) 1364
TseI GCWGC 5 cut(s) 416, 782, 1036, 1100, 1118
Tsp45I GTSAC 1 cut(s) 1364
TspDTI ATGAA 3 cut(s) 35, 104, 1033
TspGWI ACGGA 4 cut(s) 87, 311, 1173, 1284
TspRI CASTG 4 cut(s) 513, 534, 637, 855
VpaK11BI GGWCC 2 cut(s) 580, 863
XapI RAATTY 3 cut(s) 22, 888, 1149
XceI RCATGY 4 cut(s) 436, 979, 1075, 1416
XmnI GAANNNNTTC 1 cut(s) 95
XspI CTAG 4 cut(s) 80, 471, 1362, 1380
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.