Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1B

Orthogroup ID

OG0012917

Physical Location & Seq

Genomic Coordinates Forward (+)

52161463 .. 52165732

Gene Structure 4270 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1BG397500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1701 bp

ATGACTCGTCTCCTTCGCTTCAGTTTTCACAGAATGAAAATTCTCAAGCTTTTCCGGCGATGCTCCGTCATTACTAACCGGACGGGCCCAATTGCCTCAGTTAGGGTCGGGTTATTGGGTAATGCGGGGCCCAAAAGAGGGTTTTGCTCGAGCACAGAGGATTCGGAGCTGAAGGACTTGATGGAGTACATGGACTCACTCAAGAACTACGAGAAATCGGGGGTTCCGGTCGGGGCGGGTACGGATTCTGACGACGGGTTCGATCTGGGTCGGATGCGGACGTTGATGGAGCTTCTGGGTCGTCCTCATTTCAAGTTCAAGGCGGTTCACATTGCCGGAACGAAAGGAAAAGGATCAACAGCTGCATTTCTGTGCAACATTTTGAGGGCAGAAGGGTATTCAGTTGGTTGTTATACTAGCCCACATATTCGAACTATCAGGGAGCGAATAACTTTGGGAAGGTCTGGTGAGCCGGTGTCGGCAAAGGCTTTGAATTCTCTGTTTCAGGAGAATAAGGAGACTCTGGATCGTGCAATGAAAGTTGAAAATGGATATATTAGTCACTTTGAGGTTCTTACTGCTCTGGCATTCACACTATTTGCTAAAGAGAAGGTTGATATTGCAGTGATTGAGGCCGGCTTGGGGGGTGCACGGGATGCAACTAATGTCATTCCTAGCTCTGGACTTGCCACATCGGTCATTACTACAATAGGAGAGGAACATTTGGCTGCACTTGGGGGTTCTTTGGAAAGCATTGCAATGGCGAAGTCTGGAATCATGAAACATGGCCGCCCAGTGGTTTTGGGCGGTCCATTTCTTCCACATATTGAGTGCATTCTTCGTGATAAAGCTCTGTTGATGAGTTCTCCTGTAGTATTAGCGTCTGATACTAGAAATAGAAGCAAGATAAATGGTTTTAGCATGCACGATGGTAGACCCTTCCAATCTTGTGATATAGTGCTACAACTTGAGAGTGACTTAAAGCTGTCAATTGAATTATTGGATTTGAAACTATACATGCTTGGAAGTCACCAACTGCAGAATGCTGCAACTGCTACTTGTGCAGCACTATGTCTCCGAAACTTAGGATGGAGAATTTCAGATGCATCCATTAGAACTGGTTTACAGCAGACACATCTTCTTGGAAGAAGTCAATTTCTAACATCGAATGAAGCTCAGGCATTGAGATTGTATGGAGCAACAATATTGCTTGATGGAGCCCACACCAAAGAATCTGCTAAAGCGCTGATGGACACTATAAAGATGACTTTCCCAGAGTTGCGATTGACTCTTGTGGTTGCAATGGCAAACGACAAAGATCATCTAGGTTTCGCAAGAGAGTTTCTTTCAGGTGGGCATCTAGAGGGTGTCCTCTGTACAGAAGCTAACATTGCTGGGGGAAAATCTCGGACAACTGCAGCGTCAGTGCTAAGAAATTGCTGGATCCAAGCTTCCAAAGAATTGGGCCTAGATATTGTTCATGATCAAATGACAGAATGTCAAAACTTTTCAATGGACCAATTAGTTGGCATAAGCACGTCGGAAAAGAGACCATTATTGGCTGCTGTGCCTTCATTTCCGGATTCCATCAAGATTGCAAATCTGATTTCCAGAGGAAGAACTAGGGATCAATCTCATATTACTGTAATCACTGGGTCTCTACATATAGTTTCATTGACATTAGCCACCCTCAATAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006761 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008841 GO:0009058 GO:0009108 GO:0009396 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019438 GO:0019752 GO:0022414 GO:0031974 GO:0032501 GO:0032502 GO:0034641 GO:0042398 GO:0042558 GO:0042559 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046452 GO:0046483 GO:0046900 GO:0046901 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051186 GO:0051188 GO:0061458 GO:0070013 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 map00790 map01100

Pfam Domains

Protein Families

Mur_ligase_M

Protein Analysis

566

Amino Acids

61.43

Weight (kDa)

9.02

Isoelectric Point (pI)

44.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Mur_ligase_M	PF08245	111 - 356	7.4e-08	Mur ligase middle domain
Mur_ligase_C	PF02875	399 - 463	9.7e-06	Mur ligase, glutamate ligase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41480
fragaria_vesca	FvH4_7g31010 FvH4_7g31010
malus_domestica	MD07G1285000.v1.1
prunus_persica	Prupe.2G307100_v2.0.a1
pyrus_communis	pycom07g25870
rosa_chinensis	RchiOBHm_Chr1g0380091
rosa_laevigata	RLG00000026333
rosa_multiflora	Rmu_sc0001232.1_g000007 Rmu_sc0004184.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279720
rosa_rugosa	Rorug01G0417300 Rorug01G0417400
rosa_samantha	Rh1AG442500 Rh1BG397500 Rh1CG410900 Rh1DG428300
rosa_wichuraiana	Rw1G038420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccI	GTMKAC	1 cut(s)	934
AccIII	TCCGGA	1 cut(s)	1579
AciI	CCGC	6 cut(s)	125, 236, 277, 323, 790, 807
AclWI	GGATC	5 cut(s)	361, 534, 1438, 1451, 1635
AcoI	YGGCCR	1 cut(s)	787
AcsI	RAATTY	3 cut(s)	39, 493, 1095
AcuI	CTGAAG	2 cut(s)	4, 191
AfaI	GTAC	3 cut(s)	188, 241, 1378
AfeI	AGCGCT	1 cut(s)	1245
AfiI	CCNNNNNNNGG	6 cut(s)	102, 137, 138, 642, 680, 796
AgsI	TTSAA	7 cut(s)	313, 319, 493, 545, 995, 1009, 1512
AhdI	GACNNNNNGTC	1 cut(s)	1497
AjiI	CACGTC	1 cut(s)	1539
Alw21I	GWGCWC	2 cut(s)	155, 652
Alw26I	GTCTC	5 cut(s)	14, 512, 1079, 1543, 1662
Alw44I	GTGCAC	1 cut(s)	648
AlwI	GGATC	5 cut(s)	361, 534, 1438, 1451, 1635
Ama87I	CYCGRG	1 cut(s)	148
Aor13HI	TCCGGA	1 cut(s)	1579
Aor51HI	AGCGCT	1 cut(s)	1245
AoxI	GGCC	5 cut(s)	85, 128, 633, 787, 1465
ApaI	GGGCCC	2 cut(s)	89, 132
ApaLI	GTGCAC	1 cut(s)	648
ApeKI	GCWGC	6 cut(s)	362, 728, 1046, 1064, 1418, 1562
ApoI	RAATTY	3 cut(s)	39, 493, 1095
ArsI	GACNNNNNNTTYG	2 cut(s)	242, 274
AspLEI	GCGC	1 cut(s)	1246
AspS9I	GGNCC	7 cut(s)	85, 86, 128, 129, 809, 1465, 1516
AsuHPI	GGTGA	2 cut(s)	479, 1022
AsuII	TTCGAA	1 cut(s)	430
AvaI	CYCGRG	1 cut(s)	148
AvaII	GGWCC	2 cut(s)	809, 1516
BaeGI	GKGCMC	3 cut(s)	89, 132, 652
BamHI	GGATCC	1 cut(s)	1443
BanII	GRGCYC	3 cut(s)	89, 132, 1222
Bbv12I	GWGCWC	2 cut(s)	155, 652
BbvI	GCAGC	6 cut(s)	349, 715, 1033, 1076, 1430, 1549
BccI	CCATC	7 cut(s)	175, 280, 923, 1083, 1208, 1243, 1595
BclI	TGATCA	1 cut(s)	1483
BcoDI	GTCTC	5 cut(s)	14, 512, 1079, 1543, 1662
BfaI	CTAG	7 cut(s)	417, 675, 891, 1325, 1361, 1469, 1623
BfmI	CTRYAG	3 cut(s)	870, 1037, 1416
BfoI	RGCGCY	1 cut(s)	1247
BisI	GCNGC	7 cut(s)	363, 729, 790, 1047, 1065, 1419, 1563
BlsI	GCNGC	7 cut(s)	364, 730, 791, 1048, 1066, 1420, 1564
Bme18I	GGWCC	2 cut(s)	809, 1516
BmeRI	GACNNNNNGTC	1 cut(s)	1497
BmeT110I	CYCGRG	1 cut(s)	148
BmgBI	CACGTC	1 cut(s)	1539
BmgT120I	GGNCC	7 cut(s)	85, 86, 128, 129, 809, 1465, 1516
BmiI	GGNNCC	6 cut(s)	87, 129, 130, 225, 1219, 1445
BmrI	ACTGGG	2 cut(s)	788, 1662
BmsI	GCATC	6 cut(s)	50, 264, 646, 1093, 1115, 1366
BmuI	ACTGGG	2 cut(s)	788, 1662
Bpu10I	CCTNAGC	1 cut(s)	1176
Bpu14I	TTCGAA	1 cut(s)	430
BpuEI	CTTGAG	3 cut(s)	29, 185, 989
BsaI	GGTCTC	2 cut(s)	1543, 1662
BsaWI	WCCGGW	3 cut(s)	78, 226, 1579
BsaXI	ACNNNNNCTCC	2 cut(s)	1059, 1089
Bsc4I	CCNNNNNNNGG	6 cut(s)	102, 137, 138, 642, 680, 796
Bse118I	RCCGGY	2 cut(s)	472, 635
Bse1I	ACTGG	3 cut(s)	794, 1123, 1657
Bse3DI	GCAATG	6 cut(s)	330, 540, 753, 765, 1308, 1389
BseAI	TCCGGA	1 cut(s)	1579
BseGI	GGATG	4 cut(s)	279, 661, 1094, 1106
BseLI	CCNNNNNNNGG	6 cut(s)	102, 137, 138, 642, 680, 796
BseMI	GCAATG	6 cut(s)	330, 540, 753, 765, 1308, 1389
BseMII	CTCAG	2 cut(s)	111, 1190
BseNI	ACTGG	3 cut(s)	794, 1123, 1657
BseSI	GKGCMC	3 cut(s)	89, 132, 652
BseXI	GCAGC	6 cut(s)	349, 715, 1033, 1076, 1430, 1549
BseYI	CCCAGC	1 cut(s)	1394
BsgI	GTGCAG	2 cut(s)	714, 1083
Bsh1285I	CGRYCG	1 cut(s)	231
BshFI	GGCC	5 cut(s)	87, 130, 635, 789, 1467
BsiEI	CGRYCG	1 cut(s)	231
BsiHKAI	GWGCWC	2 cut(s)	155, 652
BsiHKCI	CYCGRG	1 cut(s)	148
BsiSI	CCGG	7 cut(s)	55, 79, 227, 336, 473, 636, 1580
BslI	CCNNNNNNNGG	6 cut(s)	102, 137, 138, 642, 680, 796
BsmAI	GTCTC	5 cut(s)	14, 512, 1079, 1543, 1662
BsmBI	CGTCTC	1 cut(s)	14
BsmI	GAATGC	3 cut(s)	587, 834, 1048
BsnI	GGCC	5 cut(s)	87, 130, 635, 789, 1467
Bso31I	GGTCTC	2 cut(s)	1543, 1662
BsoBI	CYCGRG	1 cut(s)	148
Bsp119I	TTCGAA	1 cut(s)	430
Bsp120I	GGGCCC	2 cut(s)	85, 128
Bsp1286I	GDGCHC	5 cut(s)	89, 132, 155, 652, 1222
Bsp13I	TCCGGA	1 cut(s)	1579
Bsp1407I	TGTACA	1 cut(s)	1376
Bsp143I	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
BspACI	CCGC	6 cut(s)	125, 236, 277, 323, 790, 807
BspANI	GGCC	5 cut(s)	87, 130, 635, 789, 1467
BspCNI	CTCAG	2 cut(s)	110, 1189
BspEI	TCCGGA	1 cut(s)	1579
BspHI	TCATGA	2 cut(s)	777, 1480
BspLI	GGNNCC	6 cut(s)	87, 129, 130, 225, 1219, 1445
BspMAI	CTGCAG	2 cut(s)	1041, 1420
BspPI	GGATC	5 cut(s)	361, 534, 1438, 1451, 1635
BspT104I	TTCGAA	1 cut(s)	430
BspTNI	GGTCTC	2 cut(s)	1543, 1662
BsrDI	GCAATG	6 cut(s)	330, 540, 753, 765, 1308, 1389
BsrFI	RCCGGY	2 cut(s)	472, 635
BsrGI	TGTACA	1 cut(s)	1376
BsrI	ACTGG	3 cut(s)	794, 1123, 1657
BssAI	RCCGGY	2 cut(s)	472, 635
BssMI	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
Bst4CI	ACNGT	1 cut(s)	1645
BstAPI	GCANNNNNTGC	1 cut(s)	656
BstAUI	TGTACA	1 cut(s)	1376
BstBI	TTCGAA	1 cut(s)	430
BstC8I	GCNNGC	2 cut(s)	637, 923
BstDEI	CTNAG	4 cut(s)	97, 1084, 1176, 1430
BstENI	CCTNNNNNAGG	1 cut(s)	100
BstF5I	GGATG	4 cut(s)	279, 661, 1094, 1106
BstH2I	RGCGCY	1 cut(s)	1247
BstHHI	GCGC	1 cut(s)	1246
BstKTI	GATC	7 cut(s)	265, 356, 529, 1321, 1446, 1486, 1630
BstMAI	GTCTC	5 cut(s)	14, 512, 1079, 1543, 1662
BstMBI	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
BstMCI	CGRYCG	1 cut(s)	231
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 656, 1052, 1061, 1391
BstNSI	RCATGY	2 cut(s)	925, 1021
BstSFI	CTRYAG	3 cut(s)	870, 1037, 1416
BstSLI	GKGCMC	3 cut(s)	89, 132, 652
BstV1I	GCAGC	6 cut(s)	349, 715, 1033, 1076, 1430, 1549
BstX2I	RGATCY	1 cut(s)	1443
BstXI	CCANNNNNNTGG	2 cut(s)	1462, 1526
BstYI	RGATCY	1 cut(s)	1443
BsuRI	GGCC	5 cut(s)	87, 130, 635, 789, 1467
BtgZI	GCGATG	1 cut(s)	73
BtrI	CACGTC	1 cut(s)	1539
BtsCI	GGATG	4 cut(s)	279, 661, 1094, 1106
BtsI	GCAGTG	1 cut(s)	630
BtsIMutI	CAGTG	4 cut(s)	630, 801, 1431, 1650
Cac8I	GCNNGC	2 cut(s)	637, 923
CciI	TCATGA	2 cut(s)	777, 1480
CfoI	GCGC	1 cut(s)	1246
Cfr10I	RCCGGY	2 cut(s)	472, 635
Cfr13I	GGNCC	7 cut(s)	85, 86, 128, 129, 809, 1465, 1516
CseI	GACGC	2 cut(s)	870, 1410
Csp6I	GTAC	3 cut(s)	187, 240, 1377
CviAII	CATG	6 cut(s)	190, 778, 785, 922, 1018, 1481
CviQI	GTAC	3 cut(s)	187, 240, 1377
DdeI	CTNAG	4 cut(s)	97, 1084, 1176, 1430
DpnI	GATC	7 cut(s)	264, 355, 528, 1320, 1445, 1485, 1629
DpnII	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
DriI	GACNNNNNGTC	1 cut(s)	1497
EaeI	YGGCCR	1 cut(s)	787
Eam1105I	GACNNNNNGTC	1 cut(s)	1497
Eco24I	GRGCYC	3 cut(s)	89, 132, 1222
Eco31I	GGTCTC	2 cut(s)	1543, 1662
Eco47I	GGWCC	2 cut(s)	809, 1516
Eco47III	AGCGCT	1 cut(s)	1245
Eco57I	CTGAAG	2 cut(s)	4, 191
Eco88I	CYCGRG	1 cut(s)	148
EcoNI	CCTNNNNNAGG	1 cut(s)	100
EcoO109I	RGGNCCY	1 cut(s)	128
EcoRI	GAATTC	1 cut(s)	493
EcoT22I	ATGCAT	1 cut(s)	1108
EcoT38I	GRGCYC	3 cut(s)	89, 132, 1222
Esp3I	CGTCTC	1 cut(s)	14
FaeI	CATG	6 cut(s)	193, 781, 788, 925, 1021, 1484
FatI	CATG	6 cut(s)	189, 777, 784, 921, 1017, 1480
FauI	CCCGC	2 cut(s)	118, 229
FbaI	TGATCA	1 cut(s)	1483
FblI	GTMKAC	1 cut(s)	934
Fnu4HI	GCNGC	7 cut(s)	363, 729, 790, 1047, 1065, 1419, 1563
FokI	GGATG	4 cut(s)	286, 668, 1093, 1101
FriOI	GRGCYC	3 cut(s)	89, 132, 1222
Fsp4HI	GCNGC	7 cut(s)	363, 729, 790, 1047, 1065, 1419, 1563
FspBI	CTAG	7 cut(s)	417, 675, 891, 1325, 1361, 1469, 1623
GlaI	GCGC	1 cut(s)	1245
GluI	GCNGC	7 cut(s)	363, 729, 790, 1047, 1065, 1419, 1563
GsaI	CCCAGC	1 cut(s)	1398
HaeII	RGCGCY	1 cut(s)	1247
HaeIII	GGCC	5 cut(s)	87, 130, 635, 789, 1467
HapII	CCGG	7 cut(s)	55, 79, 227, 336, 473, 636, 1580
HgaI	GACGC	2 cut(s)	870, 1410
HhaI	GCGC	1 cut(s)	1246
Hin1II	CATG	6 cut(s)	193, 781, 788, 925, 1021, 1484
Hin6I	GCGC	1 cut(s)	1244
HinP1I	GCGC	1 cut(s)	1244
HindIII	AAGCTT	2 cut(s)	47, 1449
HinfI	GANTC	9 cut(s)	4, 161, 194, 245, 520, 774, 1232, 1288, 1583
HpaII	CCGG	7 cut(s)	55, 79, 227, 336, 473, 636, 1580
HphI	GGTGA	2 cut(s)	479, 1022
Hpy166II	GTNNAC	4 cut(s)	328, 650, 935, 1124
Hpy188I	TCNGA	9 cut(s)	166, 250, 273, 886, 1079, 1102, 1410, 1543, 1605
Hpy8I	GTNNAC	4 cut(s)	328, 650, 935, 1124
Hpy99I	CGWCG	2 cut(s)	257, 1543
HpyAV	CCTTC	7 cut(s)	23, 166, 386, 453, 604, 949, 1581
HpyCH4III	ACNGT	1 cut(s)	1645
HpyCH4IV	ACGT	2 cut(s)	281, 1538
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 656, 1052, 1061, 1391
HpyF3I	CTNAG	4 cut(s)	97, 1084, 1176, 1430
HpySE526I	ACGT	2 cut(s)	281, 1538
Hsp92II	CATG	6 cut(s)	193, 781, 788, 925, 1021, 1484
HspAI	GCGC	1 cut(s)	1244
Kpn2I	TCCGGA	1 cut(s)	1579
KroI	GCCGGC	1 cut(s)	635
KroNI	GCCGGC	1 cut(s)	637
Ksp22I	TGATCA	1 cut(s)	1483
Kzo9I	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
LmnI	GCTCC	6 cut(s)	68, 166, 289, 442, 1196, 1217
Lsp1109I	GCAGC	6 cut(s)	349, 715, 1033, 1076, 1430, 1549
LweI	GCATC	6 cut(s)	50, 264, 646, 1093, 1115, 1366
MaeI	CTAG	7 cut(s)	417, 675, 891, 1325, 1361, 1469, 1623
MaeII	ACGT	2 cut(s)	281, 1538
MaeIII	GTNAC	3 cut(s)	560, 974, 1028
MalI	GATC	7 cut(s)	264, 355, 528, 1320, 1445, 1485, 1629
MboI	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
MboII	GAAGA	5 cut(s)	809, 830, 1130, 1158, 1629
MfeI	CAATTG	2 cut(s)	90, 990
MflI	RGATCY	1 cut(s)	1443
MhlI	GDGCHC	5 cut(s)	89, 132, 155, 652, 1222
MlyI	GAGTC	3 cut(s)	188, 514, 1282
MmeI	TCCRAC	2 cut(s)	251, 1521
Mph1103I	ATGCAT	1 cut(s)	1108
MroI	TCCGGA	1 cut(s)	1579
MroNI	GCCGGC	1 cut(s)	635
MseI	TTAA	2 cut(s)	980, 1699
MslI	CAYNNNNRTG	2 cut(s)	370, 758
MspA1I	CMGCKG	1 cut(s)	362
MspI	CCGG	7 cut(s)	55, 79, 227, 336, 473, 636, 1580
MunI	CAATTG	2 cut(s)	90, 990
Mva1269I	GAATGC	3 cut(s)	587, 834, 1048
MwoI	GCNNNNNNNGC	5 cut(s)	55, 656, 1052, 1061, 1391
NaeI	GCCGGC	1 cut(s)	637
NdeII	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
NgoMIV	GCCGGC	1 cut(s)	635
NlaIII	CATG	6 cut(s)	193, 781, 788, 925, 1021, 1484
NlaIV	GGNNCC	6 cut(s)	87, 129, 130, 225, 1219, 1445
NmuCI	GTSAC	3 cut(s)	560, 974, 1028
NsiI	ATGCAT	1 cut(s)	1108
NspI	RCATGY	2 cut(s)	925, 1021
NspV	TTCGAA	1 cut(s)	430
PaeI	GCATGC	1 cut(s)	925
PaeR7I	CTCGAG	1 cut(s)	148
PagI	TCATGA	2 cut(s)	777, 1480
PcsI	WCGNNNNNNNCGW	1 cut(s)	258
PctI	GAATGC	3 cut(s)	587, 834, 1048
PdiI	GCCGGC	1 cut(s)	637
PfeI	GAWTC	5 cut(s)	161, 245, 774, 1232, 1583
PkrI	GCNGC	7 cut(s)	364, 730, 791, 1048, 1066, 1420, 1564
PleI	GAGTC	3 cut(s)	188, 514, 1282
PpsI	GAGTC	3 cut(s)	188, 514, 1282
PspFI	CCCAGC	1 cut(s)	1394
PspN4I	GGNNCC	6 cut(s)	87, 129, 130, 225, 1219, 1445
PspOMI	GGGCCC	2 cut(s)	85, 128
PspPI	GGNCC	7 cut(s)	85, 86, 128, 129, 809, 1465, 1516
PspXI	VCTCGAGB	1 cut(s)	148
PstI	CTGCAG	2 cut(s)	1041, 1420
PsuI	RGATCY	1 cut(s)	1443
PvuII	CAGCTG	1 cut(s)	362
RsaI	GTAC	3 cut(s)	188, 241, 1378
RsaNI	GTAC	3 cut(s)	187, 240, 1377
RseI	CAYNNNNRTG	2 cut(s)	370, 758
SaqAI	TTAA	2 cut(s)	980, 1699
SatI	GCNGC	7 cut(s)	363, 729, 790, 1047, 1065, 1419, 1563
Sau3AI	GATC	7 cut(s)	262, 353, 526, 1318, 1443, 1483, 1627
Sau96I	GGNCC	7 cut(s)	85, 86, 128, 129, 809, 1465, 1516
SchI	GAGTC	3 cut(s)	188, 514, 1282
SduI	GDGCHC	5 cut(s)	89, 132, 155, 652, 1222
SfaNI	GCATC	6 cut(s)	50, 264, 646, 1093, 1115, 1366
SfcI	CTRYAG	3 cut(s)	870, 1037, 1416
Sfr274I	CTCGAG	1 cut(s)	148
SfuI	TTCGAA	1 cut(s)	430
SinI	GGWCC	2 cut(s)	809, 1516
SlaI	CTCGAG	1 cut(s)	148
SmiMI	CAYNNNNRTG	2 cut(s)	370, 758
SmlI	CTYRAG	4 cut(s)	44, 148, 200, 968
SmoI	CTYRAG	4 cut(s)	44, 148, 200, 968
SphI	GCATGC	1 cut(s)	925
SsiI	CCGC	6 cut(s)	125, 236, 277, 323, 790, 807
SspI	AATATT	1 cut(s)	1206
SspMI	CTAG	7 cut(s)	417, 675, 891, 1325, 1361, 1469, 1623
TaaI	ACNGT	1 cut(s)	1645
TaiI	ACGT	2 cut(s)	284, 1541
TaqI	TCGA	4 cut(s)	149, 261, 430, 1166
TaqII	GACCGA	1 cut(s)	685
TatI	WGTACW	2 cut(s)	186, 1376
TauI	GCSGC	1 cut(s)	792
TfiI	GAWTC	5 cut(s)	161, 245, 774, 1232, 1583
Tru1I	TTAA	2 cut(s)	980, 1699
Tru9I	TTAA	2 cut(s)	980, 1699
TscAI	CASTG	4 cut(s)	630, 801, 1431, 1657
TseFI	GTSAC	3 cut(s)	560, 974, 1028
TseI	GCWGC	6 cut(s)	362, 728, 1046, 1064, 1418, 1562
Tsp45I	GTSAC	3 cut(s)	560, 974, 1028
TspDTI	ATGAA	7 cut(s)	50, 551, 794, 1185, 1469, 1563, 1662
TspGWI	ACGGA	2 cut(s)	55, 257
TspRI	CASTG	4 cut(s)	630, 801, 1431, 1657
VneI	GTGCAC	1 cut(s)	648
VpaK11BI	GGWCC	2 cut(s)	809, 1516
XagI	CCTNNNNNAGG	1 cut(s)	100
XapI	RAATTY	3 cut(s)	39, 493, 1095
XbaI	TCTAGA	1 cut(s)	1360
XceI	RCATGY	2 cut(s)	925, 1021
XhoI	CTCGAG	1 cut(s)	148
XmiI	GTMKAC	1 cut(s)	934
XspI	CTAG	7 cut(s)	417, 675, 891, 1325, 1361, 1469, 1623
Zsp2I	ATGCAT	1 cut(s)	1108

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.