Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0001232.1

Orthogroup ID

OG0012917

Physical Location & Seq

Genomic Coordinates Forward (+)

22949 .. 28594

Gene Structure 5646 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0001232.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

atgactcgtctccttcacttcagttttcacagaatgaaaattctcaagcttttccggcgatgctccgtcattactaaccggacgagcccaattgcctcagttctggtcgggttattgggtaatgctgggcccaaaagatggttttgctcgagcacagaggattcggagctgaaggacttgatggagtacatggactcactcaagaactacgagaaatcgggggtgccggtcggggcgggtacggattctgacgacgggttcgatctgggtcggatgcggacgttgatggagcttctgggtcgtcctcatttcaagttcaaggcggttcacattgccggaacgaaaggaaaaggatcaacagctgcatttctgtgcaacattttgagggcagaaggcccacatattcgaactatcagggagcgaataactttgggaaggtctggtgagccggtgtcggcaaaggctttgaattctctgtttcaggagaataaggagactctggatcgtgcaatgaaagttgaaaatggatatattagtcactttgaggttcttactgctctggcattcacactatttgctaaagagaaggttgatattgcagtgattgaggccggcttggggggtgcacgggatgcaactaatgtcattcctagctctggacttgccacatcggtcattactacaataggagaggaacatttggctgcacttggaggttctttggaaagcattgcaatggcgaagtctggaatcatgaaacatggccgcccagtggttttgggcggtccatttcttccacatattgagtgcattcttcgtgataaagctctgttgatgagttctcctgttgtattagcgtctgatactagaaatagaagcaagataaatggttttagcatgcatgatggtagacccttccaatcttgtgatatagtgctacaacttgagagtgacttaaagctgtcaattgaattattggatttgaaactatacatgcttggaagtcaccaactgcagaatgctgcaactgctacttgtgcagcactatgtctccgaaacttaggatggagaatttcagatgcatccattagaactggtttacagcagacacatcttcttggaagaagtcaatttctaacatcgaaggaagctcaggcattgagattgtatggagcaacaatattgcttgatggagcccacaccaaagaatctgctaaagcgctgatggacactataaagatgactttcccagagtcgcgattgactcttgtggttgcaatggcaaatgacaaagatcatctaggtttcgcaagagagtttctttcaggtgggcatctagagggtgtcctctgtacagaagctaacattgctgggggaaaatctcggacaactgcagcgtcagtgctaagaaattgctggatccaagcttccaaagaattgggcctagatattgttcatgatcaaatgacagaatgtcaaaacttttcaatggaccaattagttggcttaagcacgttggaaaagagaccattattggctgctgtgccttcatttccggattccatcaagattgcaaatctgatttccagaggaagaactagggatcaatcttatattactgatcacacagaaaacgaaagaaaggaaaagaaagttgatcaggttcatgatgacgacgacgacgacgacgagttcatggatcaacaggatcacacagaaaaagaaagaaaggaaaagaaaattaataaggttggagctgtaataaagtctgtctcagacatttcgtgggtggtattgaatgaggttttcagatttggaagtgaatcaagtttgagaagaagagctaggtcccatggtatttactcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0003006 GO:0003674 GO:0003824 GO:0004326 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005759 GO:0006082 GO:0006575 GO:0006725 GO:0006732 GO:0006760 GO:0006761 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008841 GO:0009058 GO:0009108 GO:0009396 GO:0009790 GO:0009791 GO:0009793 GO:0009987 GO:0010154 GO:0016053 GO:0016874 GO:0016879 GO:0016881 GO:0018130 GO:0019438 GO:0019752 GO:0022414 GO:0031974 GO:0032501 GO:0032502 GO:0034641 GO:0042398 GO:0042558 GO:0042559 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043436 GO:0043603 GO:0043604 GO:0043648 GO:0043650 GO:0044237 GO:0044249 GO:0044271 GO:0044281 GO:0044283 GO:0044422 GO:0044424 GO:0044429 GO:0044444 GO:0044446 GO:0044464 GO:0046394 GO:0046452 GO:0046483 GO:0046900 GO:0046901 GO:0048316 GO:0048608 GO:0048731 GO:0048856 GO:0051186 GO:0051188 GO:0061458 GO:0070013 GO:0071704 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00790 ko01100 map00790 map01100

Pfam Domains

Protein Families

Mur_ligase_M

Protein Analysis

622

Amino Acids

68.55

Weight (kDa)

8.4

Isoelectric Point (pI)

44.7

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012917)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G41480
fragaria_vesca	FvH4_7g31010 FvH4_7g31010
malus_domestica	MD07G1285000.v1.1
prunus_persica	Prupe.2G307100_v2.0.a1
pyrus_communis	pycom07g25870
rosa_chinensis	RchiOBHm_Chr1g0380091
rosa_laevigata	RLG00000026333
rosa_multiflora	Rmu_sc0001232.1_g000007 Rmu_sc0004184.1_g000001
rosa_roxburghii	Rroxscaffold_4G00279720
rosa_rugosa	Rorug01G0417300 Rorug01G0417400
rosa_samantha	Rh1AG442500 Rh1BG397500 Rh1CG410900 Rh1DG428300
rosa_wichuraiana	Rw1G038420

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	223
AccB7I	CCANNNNNTGG	1 cut(s)	138
AccI	GTMKAC	1 cut(s)	910
AccII	CGCG	1 cut(s)	1258
AccIII	TCCGGA	1 cut(s)	1555
AciI	CCGC	5 cut(s)	236, 277, 323, 766, 783
AclWI	GGATC	7 cut(s)	361, 510, 1414, 1427, 1611, 1707, 1716
AcoI	YGGCCR	1 cut(s)	763
AcsI	RAATTY	3 cut(s)	39, 469, 1071
AcuI	CTGAAG	2 cut(s)	4, 191
AfaI	GTAC	3 cut(s)	188, 241, 1354
AfeI	AGCGCT	1 cut(s)	1221
AfiI	CCNNNNNNNGG	4 cut(s)	138, 618, 656, 772
AflII	CTTAAG	1 cut(s)	1507
AgsI	TTSAA	8 cut(s)	313, 319, 469, 521, 971, 985, 1488, 1798
AhdI	GACNNNNNGTC	1 cut(s)	1473
Alw21I	GWGCWC	2 cut(s)	155, 628
Alw26I	GTCTC	5 cut(s)	14, 488, 1055, 1519, 1777
Alw44I	GTGCAC	1 cut(s)	624
AlwI	GGATC	7 cut(s)	361, 510, 1414, 1427, 1611, 1707, 1716
Ama87I	CYCGRG	1 cut(s)	148
Aor13HI	TCCGGA	1 cut(s)	1555
Aor51HI	AGCGCT	1 cut(s)	1221
AoxI	GGCC	5 cut(s)	128, 394, 609, 763, 1441
ApaI	GGGCCC	1 cut(s)	132
ApaLI	GTGCAC	1 cut(s)	624
ApeKI	GCWGC	6 cut(s)	362, 704, 1022, 1040, 1394, 1538
ApoI	RAATTY	3 cut(s)	39, 469, 1071
ArsI	GACNNNNNNTTYG	2 cut(s)	242, 274
AseI	ATTAAT	1 cut(s)	1743
AspLEI	GCGC	1 cut(s)	1222
AspS9I	GGNCC	7 cut(s)	128, 129, 395, 785, 1441, 1492, 1848
AsuHPI	GGTGA	2 cut(s)	455, 998
AsuII	TTCGAA	1 cut(s)	406
AvaI	CYCGRG	1 cut(s)	148
AvaII	GGWCC	3 cut(s)	785, 1492, 1848
BaeGI	GKGCMC	2 cut(s)	132, 628
BamHI	GGATCC	1 cut(s)	1419
BanI	GGYRCC	1 cut(s)	223
BanII	GRGCYC	3 cut(s)	89, 132, 1198
Bbv12I	GWGCWC	2 cut(s)	155, 628
BbvI	GCAGC	6 cut(s)	349, 691, 1009, 1052, 1406, 1525
BccI	CCATC	8 cut(s)	132, 175, 280, 899, 1059, 1184, 1219, 1571
BclI	TGATCA	3 cut(s)	1459, 1621, 1657
BcoDI	GTCTC	5 cut(s)	14, 488, 1055, 1519, 1777
BfaI	CTAG	7 cut(s)	651, 867, 1301, 1337, 1445, 1599, 1845
BfmI	CTRYAG	2 cut(s)	1013, 1392
BfoI	RGCGCY	1 cut(s)	1223
BfrI	CTTAAG	1 cut(s)	1507
BisI	GCNGC	7 cut(s)	363, 705, 766, 1023, 1041, 1395, 1539
BlsI	GCNGC	7 cut(s)	364, 706, 767, 1024, 1042, 1396, 1540
Bme18I	GGWCC	3 cut(s)	785, 1492, 1848
BmeRI	GACNNNNNGTC	1 cut(s)	1473
BmeT110I	CYCGRG	1 cut(s)	148
BmgT120I	GGNCC	7 cut(s)	128, 129, 395, 785, 1441, 1492, 1848
BmiI	GGNNCC	5 cut(s)	130, 225, 1195, 1421, 1850
BmrI	ACTGGG	1 cut(s)	764
BmsI	GCATC	6 cut(s)	50, 264, 622, 1069, 1091, 1342
BmuI	ACTGGG	1 cut(s)	764
Bpu10I	CCTNAGC	1 cut(s)	1152
Bpu14I	TTCGAA	1 cut(s)	406
BpuEI	CTTGAG	3 cut(s)	29, 185, 965
BsaI	GGTCTC	1 cut(s)	1519
BsaJI	CCNNGG	1 cut(s)	1852
BsaWI	WCCGGW	2 cut(s)	78, 1555
BsaXI	ACNNNNNCTCC	2 cut(s)	1035, 1065
Bsc4I	CCNNNNNNNGG	4 cut(s)	138, 618, 656, 772
Bse118I	RCCGGY	3 cut(s)	226, 448, 611
Bse1I	ACTGG	2 cut(s)	770, 1099
Bse3DI	GCAATG	6 cut(s)	330, 516, 729, 741, 1284, 1365
BseAI	TCCGGA	1 cut(s)	1555
BseDI	CCNNGG	1 cut(s)	1852
BseGI	GGATG	4 cut(s)	279, 637, 1070, 1082
BseLI	CCNNNNNNNGG	4 cut(s)	138, 618, 656, 772
BseMI	GCAATG	6 cut(s)	330, 516, 729, 741, 1284, 1365
BseMII	CTCAG	3 cut(s)	111, 1166, 1788
BseNI	ACTGG	2 cut(s)	770, 1099
BseSI	GKGCMC	2 cut(s)	132, 628
BseXI	GCAGC	6 cut(s)	349, 691, 1009, 1052, 1406, 1525
BseYI	CCCAGC	2 cut(s)	125, 1370
BsgI	GTGCAG	2 cut(s)	690, 1059
Bsh1236I	CGCG	1 cut(s)	1258
Bsh1285I	CGRYCG	1 cut(s)	231
BshFI	GGCC	5 cut(s)	130, 396, 611, 765, 1443
BshNI	GGYRCC	1 cut(s)	223
BsiEI	CGRYCG	1 cut(s)	231
BsiHKAI	GWGCWC	2 cut(s)	155, 628
BsiHKCI	CYCGRG	1 cut(s)	148
BsiSI	CCGG	7 cut(s)	55, 79, 227, 336, 449, 612, 1556
BslFI	GGGAC	1 cut(s)	1834
BslI	CCNNNNNNNGG	4 cut(s)	138, 618, 656, 772
BsmAI	GTCTC	5 cut(s)	14, 488, 1055, 1519, 1777
BsmBI	CGTCTC	1 cut(s)	14
BsmFI	GGGAC	1 cut(s)	1834
BsmI	GAATGC	3 cut(s)	563, 810, 1024
BsnI	GGCC	5 cut(s)	130, 396, 611, 765, 1443
Bso31I	GGTCTC	1 cut(s)	1519
BsoBI	CYCGRG	1 cut(s)	148
Bsp119I	TTCGAA	1 cut(s)	406
Bsp120I	GGGCCC	1 cut(s)	128
Bsp1286I	GDGCHC	5 cut(s)	89, 132, 155, 628, 1198
Bsp13I	TCCGGA	1 cut(s)	1555
Bsp1407I	TGTACA	1 cut(s)	1352
Bsp19I	CCATGG	1 cut(s)	1852
Bsp68I	TCGCGA	1 cut(s)	1258
BspACI	CCGC	5 cut(s)	236, 277, 323, 766, 783
BspANI	GGCC	5 cut(s)	130, 396, 611, 765, 1443
BspCNI	CTCAG	3 cut(s)	110, 1165, 1787
BspEI	TCCGGA	1 cut(s)	1555
BspFNI	CGCG	1 cut(s)	1258
BspHI	TCATGA	3 cut(s)	753, 1456, 1666
BspLI	GGNNCC	5 cut(s)	130, 225, 1195, 1421, 1850
BspMAI	CTGCAG	2 cut(s)	1017, 1396
BspPI	GGATC	7 cut(s)	361, 510, 1414, 1427, 1611, 1707, 1716
BspQI	GCTCTTC	1 cut(s)	1834
BspT104I	TTCGAA	1 cut(s)	406
BspT107I	GGYRCC	1 cut(s)	223
BspTI	CTTAAG	1 cut(s)	1507
BspTNI	GGTCTC	1 cut(s)	1519
BsrDI	GCAATG	6 cut(s)	330, 516, 729, 741, 1284, 1365
BsrFI	RCCGGY	3 cut(s)	226, 448, 611
BsrGI	TGTACA	1 cut(s)	1352
BsrI	ACTGG	2 cut(s)	770, 1099
BssAI	RCCGGY	3 cut(s)	226, 448, 611
BssECI	CCNNGG	1 cut(s)	1852
BssT1I	CCWWGG	1 cut(s)	1852
Bst6I	CTCTTC	1 cut(s)	1834
BstAFI	CTTAAG	1 cut(s)	1507
BstAPI	GCANNNNNTGC	1 cut(s)	632
BstAUI	TGTACA	1 cut(s)	1352
BstBI	TTCGAA	1 cut(s)	406
BstC8I	GCNNGC	2 cut(s)	613, 899
BstDEI	CTNAG	6 cut(s)	97, 1060, 1152, 1406, 1774, 1866
BstDSI	CCRYGG	1 cut(s)	1852
BstF5I	GGATG	4 cut(s)	279, 637, 1070, 1082
BstFNI	CGCG	1 cut(s)	1258
BstH2I	RGCGCY	1 cut(s)	1223
BstHHI	GCGC	1 cut(s)	1222
BstMAI	GTCTC	5 cut(s)	14, 488, 1055, 1519, 1777
BstMCI	CGRYCG	1 cut(s)	231
BstMWI	GCNNNNNNNGC	5 cut(s)	55, 632, 1028, 1037, 1367
BstNSI	RCATGY	2 cut(s)	901, 997
BstSFI	CTRYAG	2 cut(s)	1013, 1392
BstSLI	GKGCMC	2 cut(s)	132, 628
BstUI	CGCG	1 cut(s)	1258
BstV1I	GCAGC	6 cut(s)	349, 691, 1009, 1052, 1406, 1525
BstX2I	RGATCY	1 cut(s)	1419
BstXI	CCANNNNNNTGG	2 cut(s)	1438, 1502
BstYI	RGATCY	1 cut(s)	1419
BsuRI	GGCC	5 cut(s)	130, 396, 611, 765, 1443
BtgI	CCRYGG	1 cut(s)	1852
BtgZI	GCGATG	1 cut(s)	73
BtsCI	GGATG	4 cut(s)	279, 637, 1070, 1082
BtsI	GCAGTG	1 cut(s)	606
BtsIMutI	CAGTG	3 cut(s)	606, 777, 1407
BtuMI	TCGCGA	1 cut(s)	1258
Cac8I	GCNNGC	2 cut(s)	613, 899
CciI	TCATGA	3 cut(s)	753, 1456, 1666
CfoI	GCGC	1 cut(s)	1222
Cfr10I	RCCGGY	3 cut(s)	226, 448, 611
Cfr13I	GGNCC	7 cut(s)	128, 129, 395, 785, 1441, 1492, 1848
CseI	GACGC	2 cut(s)	846, 1386
Csp6I	GTAC	3 cut(s)	187, 240, 1353
CviQI	GTAC	3 cut(s)	187, 240, 1353
DdeI	CTNAG	6 cut(s)	97, 1060, 1152, 1406, 1774, 1866
DriI	GACNNNNNGTC	1 cut(s)	1473
EaeI	YGGCCR	1 cut(s)	763
Eam1104I	CTCTTC	1 cut(s)	1834
Eam1105I	GACNNNNNGTC	1 cut(s)	1473
EarI	CTCTTC	1 cut(s)	1834
Eco130I	CCWWGG	1 cut(s)	1852
Eco24I	GRGCYC	3 cut(s)	89, 132, 1198
Eco31I	GGTCTC	1 cut(s)	1519
Eco47I	GGWCC	3 cut(s)	785, 1492, 1848
Eco47III	AGCGCT	1 cut(s)	1221
Eco57I	CTGAAG	2 cut(s)	4, 191
Eco88I	CYCGRG	1 cut(s)	148
EcoO109I	RGGNCCY	1 cut(s)	1848
EcoRI	GAATTC	1 cut(s)	469
EcoT14I	CCWWGG	1 cut(s)	1852
EcoT22I	ATGCAT	2 cut(s)	903, 1084
EcoT38I	GRGCYC	3 cut(s)	89, 132, 1198
ErhI	CCWWGG	1 cut(s)	1852
Esp3I	CGTCTC	1 cut(s)	14
FaqI	GGGAC	1 cut(s)	1834
FauI	CCCGC	1 cut(s)	229
FbaI	TGATCA	3 cut(s)	1459, 1621, 1657
FblI	GTMKAC	1 cut(s)	910
Fnu4HI	GCNGC	7 cut(s)	363, 705, 766, 1023, 1041, 1395, 1539
FokI	GGATG	4 cut(s)	286, 644, 1069, 1077
FriOI	GRGCYC	3 cut(s)	89, 132, 1198
Fsp4HI	GCNGC	7 cut(s)	363, 705, 766, 1023, 1041, 1395, 1539
FspBI	CTAG	7 cut(s)	651, 867, 1301, 1337, 1445, 1599, 1845
GlaI	GCGC	1 cut(s)	1221
GluI	GCNGC	7 cut(s)	363, 705, 766, 1023, 1041, 1395, 1539
GsaI	CCCAGC	2 cut(s)	129, 1374
HaeII	RGCGCY	1 cut(s)	1223
HaeIII	GGCC	5 cut(s)	130, 396, 611, 765, 1443
HapII	CCGG	7 cut(s)	55, 79, 227, 336, 449, 612, 1556
HgaI	GACGC	2 cut(s)	846, 1386
HhaI	GCGC	1 cut(s)	1222
Hin6I	GCGC	1 cut(s)	1220
HinP1I	GCGC	1 cut(s)	1220
HindIII	AAGCTT	2 cut(s)	47, 1425
HpaII	CCGG	7 cut(s)	55, 79, 227, 336, 449, 612, 1556
HphI	GGTGA	2 cut(s)	455, 998
Hpy166II	GTNNAC	4 cut(s)	328, 626, 911, 1100
Hpy8I	GTNNAC	4 cut(s)	328, 626, 911, 1100
Hpy99I	CGWCG	6 cut(s)	257, 1679, 1682, 1685, 1688, 1691
HpyAV	CCTTC	8 cut(s)	23, 166, 386, 429, 580, 925, 1138, 1557
HpyCH4IV	ACGT	2 cut(s)	281, 1514
HpyF10VI	GCNNNNNNNGC	5 cut(s)	55, 632, 1028, 1037, 1367
HpyF3I	CTNAG	6 cut(s)	97, 1060, 1152, 1406, 1774, 1866
HpySE526I	ACGT	2 cut(s)	281, 1514
HspAI	GCGC	1 cut(s)	1220
Kpn2I	TCCGGA	1 cut(s)	1555
KroI	GCCGGC	1 cut(s)	611
KroNI	GCCGGC	1 cut(s)	613
Ksp22I	TGATCA	3 cut(s)	1459, 1621, 1657
LguI	GCTCTTC	1 cut(s)	1834
LmnI	GCTCC	7 cut(s)	68, 166, 289, 418, 1172, 1193, 1754
Lsp1109I	GCAGC	6 cut(s)	349, 691, 1009, 1052, 1406, 1525
LweI	GCATC	6 cut(s)	50, 264, 622, 1069, 1091, 1342
MaeI	CTAG	7 cut(s)	651, 867, 1301, 1337, 1445, 1599, 1845
MaeII	ACGT	2 cut(s)	281, 1514
MaeIII	GTNAC	3 cut(s)	536, 950, 1004
MboII	GAAGA	7 cut(s)	785, 806, 1106, 1134, 1605, 1848, 1851
MfeI	CAATTG	2 cut(s)	90, 966
MflI	RGATCY	1 cut(s)	1419
MhlI	GDGCHC	5 cut(s)	89, 132, 155, 628, 1198
MlyI	GAGTC	4 cut(s)	188, 490, 1258, 1262
MmeI	TCCRAC	3 cut(s)	251, 1497, 1732
Mph1103I	ATGCAT	2 cut(s)	903, 1084
MroI	TCCGGA	1 cut(s)	1555
MroNI	GCCGGC	1 cut(s)	611
MseI	TTAA	3 cut(s)	956, 1508, 1743
MslI	CAYNNNNRTG	2 cut(s)	370, 734
MspA1I	CMGCKG	1 cut(s)	362
MspCI	CTTAAG	1 cut(s)	1507
MspI	CCGG	7 cut(s)	55, 79, 227, 336, 449, 612, 1556
MunI	CAATTG	2 cut(s)	90, 966
Mva1269I	GAATGC	3 cut(s)	563, 810, 1024
MvnI	CGCG	1 cut(s)	1258
MwoI	GCNNNNNNNGC	5 cut(s)	55, 632, 1028, 1037, 1367
NaeI	GCCGGC	1 cut(s)	613
NcoI	CCATGG	1 cut(s)	1852
NgoMIV	GCCGGC	1 cut(s)	611
NlaIV	GGNNCC	5 cut(s)	130, 225, 1195, 1421, 1850
NmuCI	GTSAC	3 cut(s)	536, 950, 1004
NruI	TCGCGA	1 cut(s)	1258
NsiI	ATGCAT	2 cut(s)	903, 1084
NspI	RCATGY	2 cut(s)	901, 997
NspV	TTCGAA	1 cut(s)	406
PaeI	GCATGC	1 cut(s)	901
PaeR7I	CTCGAG	1 cut(s)	148
PagI	TCATGA	3 cut(s)	753, 1456, 1666
PciSI	GCTCTTC	1 cut(s)	1834
PcsI	WCGNNNNNNNCGW	4 cut(s)	258, 1680, 1683, 1686
PctI	GAATGC	3 cut(s)	563, 810, 1024
PdiI	GCCGGC	1 cut(s)	613
PfeI	GAWTC	6 cut(s)	161, 245, 750, 1208, 1559, 1823
PflMI	CCANNNNNTGG	1 cut(s)	138
PkrI	GCNGC	7 cut(s)	364, 706, 767, 1024, 1042, 1396, 1540
PleI	GAGTC	4 cut(s)	188, 490, 1258, 1261
PpsI	GAGTC	4 cut(s)	188, 490, 1258, 1261
PpuMI	RGGWCCY	1 cut(s)	1848
PshBI	ATTAAT	1 cut(s)	1743
Psp5II	RGGWCCY	1 cut(s)	1848
PspFI	CCCAGC	2 cut(s)	125, 1370
PspN4I	GGNNCC	5 cut(s)	130, 225, 1195, 1421, 1850
PspOMI	GGGCCC	1 cut(s)	128
PspPI	GGNCC	7 cut(s)	128, 129, 395, 785, 1441, 1492, 1848
PspPPI	RGGWCCY	1 cut(s)	1848
PspXI	VCTCGAGB	1 cut(s)	148
PstI	CTGCAG	2 cut(s)	1017, 1396
PsuI	RGATCY	1 cut(s)	1419
PvuII	CAGCTG	1 cut(s)	362
RruI	TCGCGA	1 cut(s)	1258
RsaI	GTAC	3 cut(s)	188, 241, 1354
RsaNI	GTAC	3 cut(s)	187, 240, 1353
RseI	CAYNNNNRTG	2 cut(s)	370, 734
SapI	GCTCTTC	1 cut(s)	1834
SaqAI	TTAA	3 cut(s)	956, 1508, 1743
SatI	GCNGC	7 cut(s)	363, 705, 766, 1023, 1041, 1395, 1539
Sau96I	GGNCC	7 cut(s)	128, 129, 395, 785, 1441, 1492, 1848
SchI	GAGTC	4 cut(s)	188, 490, 1258, 1262
SduI	GDGCHC	5 cut(s)	89, 132, 155, 628, 1198
SfaNI	GCATC	6 cut(s)	50, 264, 622, 1069, 1091, 1342
SfcI	CTRYAG	2 cut(s)	1013, 1392
Sfr274I	CTCGAG	1 cut(s)	148
SfuI	TTCGAA	1 cut(s)	406
SinI	GGWCC	3 cut(s)	785, 1492, 1848
SlaI	CTCGAG	1 cut(s)	148
SmiMI	CAYNNNNRTG	2 cut(s)	370, 734
SmlI	CTYRAG	5 cut(s)	44, 148, 200, 944, 1507
SmoI	CTYRAG	5 cut(s)	44, 148, 200, 944, 1507
SphI	GCATGC	1 cut(s)	901
SsiI	CCGC	5 cut(s)	236, 277, 323, 766, 783
SspI	AATATT	1 cut(s)	1182
SspMI	CTAG	7 cut(s)	651, 867, 1301, 1337, 1445, 1599, 1845
StyI	CCWWGG	1 cut(s)	1852
TaiI	ACGT	2 cut(s)	284, 1517
TaqI	TCGA	4 cut(s)	149, 261, 406, 1142
TaqII	GACCGA	1 cut(s)	661
TatI	WGTACW	2 cut(s)	186, 1352
TauI	GCSGC	1 cut(s)	768
TfiI	GAWTC	6 cut(s)	161, 245, 750, 1208, 1559, 1823
Tru1I	TTAA	3 cut(s)	956, 1508, 1743
Tru9I	TTAA	3 cut(s)	956, 1508, 1743
TscAI	CASTG	3 cut(s)	606, 777, 1407
TseFI	GTSAC	3 cut(s)	536, 950, 1004
TseI	GCWGC	6 cut(s)	362, 704, 1022, 1040, 1394, 1538
Tsp45I	GTSAC	3 cut(s)	536, 950, 1004
TspDTI	ATGAA	7 cut(s)	50, 527, 770, 1445, 1539, 1655, 1684
TspGWI	ACGGA	2 cut(s)	55, 257
TspRI	CASTG	3 cut(s)	606, 777, 1407
Van91I	CCANNNNNTGG	1 cut(s)	138
Vha464I	CTTAAG	1 cut(s)	1507
VneI	GTGCAC	1 cut(s)	624
VpaK11BI	GGWCC	3 cut(s)	785, 1492, 1848
VspI	ATTAAT	1 cut(s)	1743
XapI	RAATTY	3 cut(s)	39, 469, 1071
XbaI	TCTAGA	1 cut(s)	1336
XceI	RCATGY	2 cut(s)	901, 997
XhoI	CTCGAG	1 cut(s)	148
XmiI	GTMKAC	1 cut(s)	910
XspI	CTAG	7 cut(s)	651, 867, 1301, 1337, 1445, 1599, 1845
Zsp2I	ATGCAT	2 cut(s)	903, 1084

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.