Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0007254

Physical Location & Seq

Genomic Coordinates Reverse (-)

1004460 .. 1007887

Gene Structure 3428 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g01340.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3015 bp

ATGACTACCAAAGAGAGCTTGGTTAAACAGCATGCTAAAGTTGCCGAAGAAGCTGTCTCAGGTTGGGAAAAGGCTGAAGCGGAGGCTCTCGCATTGAAAACTCATTTAGAATCTGTGACTCTTTTGAAGCTCACTGCTGAAGACCGGGCCGCACATTTGGATGGTGCTCTTAAAGAGTGCATGCGGCAGATACGAAATCTTAAGGAAGAACATGAGCAGAAAATACAAGATGTTGTTTTCACCAAAAACACGCAAGTTGACAAAATCAAGCATGAGCTCGAAGCTAAGATAGCTAATTTAGATCAAGAACTCCTAAGGTCTGCTGCTGAAAATGCTGCTATTTCCAGGTCCTTACAAGAGCGTTCGAATATGCTATTCAAGATAAGCGAAGAGAAGTCACAAGCTGAGGCAGAAATTGAGCATTTTAAGAGCAACGTTGAGTCTTGTGAAAGGGAAATACATTCTCTGAAGTATGAACTCCATCTAGCCGCCAAGGAGCTAGAAATTCGGAATGAGGAAAAGAACATGAGTATGAGGTCTGCTGAAGCAGCCAACAAGCAGCATATGGAAGGTGTTAAAAAAATAACTAAGCTTGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAGAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTTGAGGTTGAAAGTTTAGGCCGAGATTATGGAGAAACTCGATTAAGGAAGTCTCCTGTTAAGCCTTCTAGTCCACAAATGTCCCCGCACATGTCCCTAGCGACTGAGTTTTCTCTTGATAATGTACAGAAGTTTCAAAAGGAGAATGAATTTCTCACAGAACGTTTATTAGCAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAGCGTAACAGCGATGTGCTGGATTCAAGGAGTATGTATGCTCAGGCAGCCAGCAAGCTTCAAACATTAGAAGCACAACTTCATATCAACAATCTACAGAAAGGCTCGCCAAAATCTGTTGTTCAGATCACCCCTGGAGGTTCGTCAAGCCAGGATGCAAGCAATCCACCAAGCTCGACCTCCTTGTCTGAAGATGGTAACGATGACGCCAGAAGCTATGCTGAGTCTTGGGCCACAACATTGGAGAAGAACAATGCAAAGTCAAACAAATCTGAAAGTCAAAACGACTTGAATCTTATGGATGACTTTCTGGAGATGGAGAAGTTGGCTTGTTTGCCAAATGACTCGAATGGAGCCATCTCTAGTAAGACATCCGAAAGAGAGAGTCATGATGCTTTGGGAGATGTCACTGCCGCCAAAGATGTCCAATCTGAGCAGCAGCATGATTCAAGTCCCTTGGTAGGTGACCAGGCATCTTCTAATGCGGAATTGTCAGGATCCAGTCCTGAATCTGATGAAAGCCAGCTGCCAAATGCGGAATTGTCAGGATCCAGTCCTGAATCTGATGAAAGCCAGCTGCCACTGGTGAAACTCCGATCGAAAATCTGTATGCTATTGGAATTCTTATCTAAGGAAACGGATTTTGGGAAAGTTATTGAGGATATCAAACTTGTAGTCCAGGAAGCACAAAATACTCTGCACCCGCACACTGTAAAGTGTGTTTCAGAGGAAGTTCACAGCTCTGATGCCCTATGTGACCGGCACGCAAATCCTGATGATTCTGGTTTAACCACAGAAAAGGAAATCACTTTGTCCCAGCCAGCCACAGAGACGATGAAAGTAATAAGCGAAGATCTGGCATCTGCCATTTCTTTGATCCATGACTTTGTGCTGTTCCTGGGCAAAGAAGTGATGGAAGTGCATGACACGCTTCCGGATGGCGATGGATTGACCCTAAAGATTGAAGAATTCTCTGGCACATTCAGTAAAGTTATTCATGGAAACTTAAGTTTGGGTGAATTTGTTCTTGGCCTTTCGCATGTTTTAGCAAACGCCAGTGAACTCAAATTCAACGTTCTAGGCGCCAAGGGTGTTGAATCAGAAACTAACAGTCCTGATTGTATTGACAAGGTAGCATTACCAGAGAATAAGGTAGTTGAGAAGGATTCATCACAAAGATTTCAAAATGTTTGTGTCCACATTCCTAATGATACTAACCCCGAAGTTCCTGACGATGGAAATCTTGTCTCCGGCTATGAACCAAATGCCGCGCCACGCAAAATCTCACTGGAGGAGTTTGAACAACTGAAATCAGAGAAAGATAACCTGGCAACGGATTTGGCAAGATGTTCTGAAACTCTAGAGATTACAAAGTCTCAATTACAGGAAACTGAGCAGCTTCTTGCTGAAGCTAAATTACAATTTGCTTCTGCTAAGAACTCAAATAGCTTAGCCGAGACGCAGCTGAAATGTATGGCAGAATCATACAGGTCACTAGAGTCACGAGCTCAGGAGTTAGAAACTGAACTGAAGCTTCTGCAAGTCAGAAACGAAACTCTGGAAAGCGAGCTACAAGAAGAGAAAAGGAACCATCAAGATGTTTTGGCCAGATGCACGGAACTTCAAGAGCAGTTGAAAAGCAATGAGCGTTTGGAAGCTGAGACTGAATTCAAGACAAAACAGGACAGGGAGTTGGCAGATGCAGCGGAGAAGCTTGCCGAGTGTCAAGAAACCATATTTCTTCTCGGCAAGCAGTTGAAGGCATTGCACCCTCAAACAGAGGTCGTGGGATCTCCATACAATGGGAGGAGTCAAAAGGGTGAAGGGTTCACTGAGGATGAACCCACTACCAGTGCCATGAACTTGCAAGACTCAGAAAAAGGTGAGACGGAAGGTGCTTCTTCTGTCAACGTAAACAGAGTGGGCAGCGAGTCTCCCATCAACCTGCATAACTCTCCATGCCCATCCGACACAGAGGCAAGCACTGTCTTAAAATCACCAGTCAGTTCCAAAAGTCCGAAACACAAGTCTTCCAAGTCAACTCCCTCATCTATGTCTTCTACCCCAACACCAGAGAAACATCAGCGCGGCATCAGCAGATTCTTCTCCTCAAAAGGAAAGAACGGTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000902 GO:0000904 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007017 GO:0008017 GO:0008092 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0015631 GO:0016020 GO:0016043 GO:0022607 GO:0030154 GO:0031109 GO:0032502 GO:0032989 GO:0034622 GO:0043933 GO:0044085 GO:0044464 GO:0046785 GO:0048468 GO:0048856 GO:0048869 GO:0051258 GO:0065003 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0097435

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FPP

Protein Analysis

1005

Amino Acids

110.86

Weight (kDa)

5.06

Isoelectric Point (pI)

54.67

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007254)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19835 AT1G19835 AT1G19835 AT1G19835 AT1G19835 AT1G19835
fragaria_vesca	FvH4_2g38730 FvH4_2g38730 FvH4_2g38730
malus_domestica	MD08G1015000.v1.1
prunus_persica	Prupe.1G368000_v2.0.a1 Prupe.1G368000_v2.0.a1 Prupe.1G368000_v2.0.a1
pyrus_communis	pycom08g01340 pycom15g01230
rosa_chinensis	RchiOBHm_Chr6g0302571
rosa_laevigata	RLG00000011160
rosa_multiflora	Rmu_sc0005455.1_g000013
rosa_roxburghii	Rroxscaffold_7G00165600
rosa_rugosa	Rorug06G0315100
rosa_samantha	Rh6AG428500 Rh6BG474100 Rh6CG440700 Rh6DG427500
rosa_wichuraiana	Rw6G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1066
Acc36I	ACCTGC	1 cut(s)	2835
AccB1I	GGYRCC	1 cut(s)	1964
AccB7I	CCANNNNNTGG	1 cut(s)	2684
AccII	CGCG	2 cut(s)	2153, 2970
AccIII	TCCGGA	1 cut(s)	1816
AclI	AACGTT	3 cut(s)	435, 832, 1956
AclWI	GGATC	6 cut(s)	1374, 1387, 1425, 1438, 1753, 2680
AcoI	YGGCCR	1 cut(s)	2487
AcsI	RAATTY	7 cut(s)	504, 818, 1502, 1850, 1901, 1949, 2549
AcuI	CTGAAG	7 cut(s)	96, 159, 488, 564, 1092, 2310, 2432
AcyI	GRCGYC	2 cut(s)	1089, 1965
AfaI	GTAC	1 cut(s)	795
AfiI	CCNNNNNNNGG	4 cut(s)	1343, 2117, 2215, 2684
AflII	CTTAAG	2 cut(s)	200, 1888
AflIII	ACRYGT	1 cut(s)	759
AjnI	CCWGG	8 cut(s)	344, 640, 1015, 1032, 1350, 1560, 1779, 2208
AjuI	GAANNNNNNNTTGG	6 cut(s)	860, 892, 1509, 1541, 1893, 1925
Alw21I	GWGCWC	3 cut(s)	169, 279, 2392
Alw26I	GTCTC	9 cut(s)	61, 726, 1706, 2134, 2262, 2333, 2537, 2762, 2820
AlwI	GGATC	6 cut(s)	1374, 1387, 1425, 1438, 1753, 2680
Aor13HI	TCCGGA	1 cut(s)	1816
AoxI	GGCC	5 cut(s)	147, 688, 1113, 1912, 2487
ApoI	RAATTY	7 cut(s)	504, 818, 1502, 1850, 1901, 1949, 2549
ArsI	GACNNNNNNTTYG	6 cut(s)	39, 71, 1542, 1574, 2894, 2926
Asp700I	GAANNNNTTC	1 cut(s)	1905
AspLEI	GCGC	3 cut(s)	1967, 2155, 2970
AspS9I	GGNCC	4 cut(s)	147, 348, 644, 1113
AsuC2I	CCSGG	1 cut(s)	146
AsuHPI	GGTGA	8 cut(s)	232, 1003, 1358, 1480, 1910, 2714, 2777, 2871
AsuII	TTCGAA	1 cut(s)	365
AvaII	GGWCC	2 cut(s)	348, 644
AxyI	CCTNAGG	1 cut(s)	314
BalI	TGGCCA	1 cut(s)	2489
BamHI	GGATCC	2 cut(s)	1379, 1430
BanI	GGYRCC	1 cut(s)	1964
BanII	GRGCYC	2 cut(s)	279, 2392
BarI	GAAGNNNNNNTAC	2 cut(s)	2283, 2315
BauI	CACGAG	1 cut(s)	2385
BbsI	GAAGAC	3 cut(s)	147, 2904, 2931
Bbv12I	GWGCWC	3 cut(s)	169, 279, 2392
BbvCI	CCTCAGC	1 cut(s)	405
BciT130I	CCWGG	8 cut(s)	346, 642, 1017, 1034, 1352, 1562, 1781, 2210
BcnI	CCSGG	1 cut(s)	146
BcoDI	GTCTC	9 cut(s)	61, 726, 1706, 2134, 2262, 2333, 2537, 2762, 2820
BfaI	CTAG	8 cut(s)	485, 500, 738, 767, 1245, 1961, 2243, 2378
BfmI	CTRYAG	1 cut(s)	977
BfoI	RGCGCY	1 cut(s)	1968
BfrI	CTTAAG	2 cut(s)	200, 1888
BfuAI	ACCTGC	1 cut(s)	2835
BglII	AGATCT	1 cut(s)	1735
BlpI	GCTNAGC	1 cut(s)	2332
Bme1390I	CCNGG	9 cut(s)	146, 346, 642, 1017, 1034, 1352, 1562, 1781, 2210
Bme18I	GGWCC	2 cut(s)	348, 644
BmgT120I	GGNCC	4 cut(s)	147, 348, 644, 1113
BmiI	GGNNCC	5 cut(s)	1237, 1381, 1432, 1966, 2471
BmrFI	CCNGG	9 cut(s)	146, 346, 642, 1017, 1034, 1352, 1562, 1781, 2210
BmsI	GCATC	9 cut(s)	852, 1027, 1264, 1364, 1618, 1751, 2483, 2572, 2982
BpiI	GAAGAC	3 cut(s)	147, 2904, 2931
BpmI	CTGGAG	3 cut(s)	1038, 1214, 2192
Bpu10I	CCTNAGC	3 cut(s)	405, 924, 2391
Bpu1102I	GCTNAGC	1 cut(s)	2332
Bpu14I	TTCGAA	1 cut(s)	365
BpuEI	CTTGAG	1 cut(s)	692
BpuMI	CCSGG	1 cut(s)	146
BsaAI	YACGTR	1 cut(s)	617
BsaBI	GATNNNNATC	1 cut(s)	2121
BsaHI	GRCGYC	2 cut(s)	1089, 1965
BsaJI	CCNNGG	5 cut(s)	492, 1015, 1338, 1780, 1968
BsaWI	WCCGGW	1 cut(s)	1816
Bsc4I	CCNNNNNNNGG	4 cut(s)	1343, 2117, 2215, 2684
Bse118I	RCCGGY	1 cut(s)	1641
Bse1I	ACTGG	7 cut(s)	1383, 1434, 1470, 1938, 2175, 2733, 2882
Bse21I	CCTNAGG	1 cut(s)	314
Bse3DI	GCAATG	3 cut(s)	849, 2530, 2645
Bse8I	GATNNNNATC	1 cut(s)	2121
BseAI	TCCGGA	1 cut(s)	1816
BseBI	CCWGG	8 cut(s)	346, 642, 1017, 1034, 1352, 1562, 1781, 2210
BseDI	CCNNGG	5 cut(s)	492, 1015, 1338, 1780, 1968
BseGI	GGATG	7 cut(s)	166, 1042, 1189, 1253, 1825, 2725, 2846
BseJI	GATNNNNATC	1 cut(s)	2121
BseLI	CCNNNNNNNGG	4 cut(s)	1343, 2117, 2215, 2684
BseMI	GCAATG	3 cut(s)	849, 2530, 2645
BseNI	ACTGG	7 cut(s)	1383, 1434, 1470, 1938, 2175, 2733, 2882
BseRI	GAGGAG	3 cut(s)	2189, 2704, 2980
BseYI	CCCAGC	1 cut(s)	1698
BsgI	GTGCAG	2 cut(s)	636, 1565
Bsh1236I	CGCG	2 cut(s)	2153, 2970
Bsh1285I	CGRYCG	1 cut(s)	1481
BshFI	GGCC	5 cut(s)	149, 690, 1115, 1914, 2489
BshNI	GGYRCC	1 cut(s)	1964
BsiEI	CGRYCG	1 cut(s)	1481
BsiHKAI	GWGCWC	3 cut(s)	169, 279, 2392
BsiSI	CCGG	4 cut(s)	145, 1642, 1817, 2133
BslFI	GGGAC	4 cut(s)	736, 748, 1320, 1681
BslI	CCNNNNNNNGG	4 cut(s)	1343, 2117, 2215, 2684
BsmAI	GTCTC	9 cut(s)	61, 726, 1706, 2134, 2262, 2333, 2537, 2762, 2820
BsmBI	CGTCTC	3 cut(s)	1706, 2333, 2762
BsmFI	GGGAC	4 cut(s)	736, 748, 1320, 1681
BsnI	GGCC	5 cut(s)	149, 690, 1115, 1914, 2489
Bsp119I	TTCGAA	1 cut(s)	365
Bsp1286I	GDGCHC	3 cut(s)	169, 279, 2392
Bsp13I	TCCGGA	1 cut(s)	1816
Bsp1407I	TGTACA	1 cut(s)	793
Bsp143I	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
Bsp1720I	GCTNAGC	1 cut(s)	2332
BspANI	GGCC	5 cut(s)	149, 690, 1115, 1914, 2489
BspEI	TCCGGA	1 cut(s)	1816
BspFNI	CGCG	2 cut(s)	2153, 2970
BspHI	TCATGA	1 cut(s)	1270
BspLI	GGNNCC	5 cut(s)	1237, 1381, 1432, 1966, 2471
BspMI	ACCTGC	1 cut(s)	2835
BspPI	GGATC	6 cut(s)	1374, 1387, 1425, 1438, 1753, 2680
BspT104I	TTCGAA	1 cut(s)	365
BspT107I	GGYRCC	1 cut(s)	1964
BspTI	CTTAAG	2 cut(s)	200, 1888
BsrDI	GCAATG	3 cut(s)	849, 2530, 2645
BsrFI	RCCGGY	1 cut(s)	1641
BsrGI	TGTACA	1 cut(s)	793
BsrI	ACTGG	7 cut(s)	1383, 1434, 1470, 1938, 2175, 2733, 2882
BssAI	RCCGGY	1 cut(s)	1641
BssECI	CCNNGG	5 cut(s)	492, 1015, 1338, 1780, 1968
BssMI	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
BssNI	GRCGYC	2 cut(s)	1089, 1965
BssSI	CACGAG	1 cut(s)	2385
BssT1I	CCWWGG	3 cut(s)	492, 1338, 1968
Bst2BI	CACGAG	1 cut(s)	2385
Bst2UI	CCWGG	8 cut(s)	346, 642, 1017, 1034, 1352, 1562, 1781, 2210
Bst4CI	ACNGT	4 cut(s)	1594, 1994, 2869, 3008
Bst6I	CTCTTC	2 cut(s)	384, 2454
BstACI	GRCGYC	2 cut(s)	1089, 1965
BstAFI	CTTAAG	2 cut(s)	200, 1888
BstAUI	TGTACA	1 cut(s)	793
BstBAI	YACGTR	1 cut(s)	617
BstBI	TTCGAA	1 cut(s)	365
BstEII	GGTNACC	1 cut(s)	1346
BstF5I	GGATG	7 cut(s)	166, 1042, 1189, 1253, 1825, 2725, 2846
BstFNI	CGCG	2 cut(s)	2153, 2970
BstH2I	RGCGCY	1 cut(s)	1968
BstHHI	GCGC	3 cut(s)	1967, 2155, 2970
BstKTI	GATC	8 cut(s)	304, 1011, 1382, 1433, 1481, 1738, 1761, 2675
BstMAI	GTCTC	9 cut(s)	61, 726, 1706, 2134, 2262, 2333, 2537, 2762, 2820
BstMBI	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
BstMCI	CGRYCG	1 cut(s)	1481
BstNI	CCWGG	8 cut(s)	346, 642, 1017, 1034, 1352, 1562, 1781, 2210
BstNSI	RCATGY	4 cut(s)	35, 184, 763, 1925
BstPI	GGTNACC	1 cut(s)	1346
BstSCI	CCNGG	9 cut(s)	144, 344, 640, 1015, 1032, 1350, 1560, 1779, 2208
BstSFI	CTRYAG	1 cut(s)	977
BstUI	CGCG	2 cut(s)	2153, 2970
BstV2I	GAAGAC	3 cut(s)	147, 2904, 2931
BstX2I	RGATCY	4 cut(s)	1379, 1430, 1735, 2672
BstXI	CCANNNNNNTGG	1 cut(s)	1123
BstYI	RGATCY	4 cut(s)	1379, 1430, 1735, 2672
Bsu36I	CCTNAGG	1 cut(s)	314
BsuRI	GGCC	5 cut(s)	149, 690, 1115, 1914, 2489
BtgZI	GCGATG	2 cut(s)	909, 1839
BtsCI	GGATG	7 cut(s)	166, 1042, 1189, 1253, 1825, 2725, 2846
BtsI	GCAGTG	2 cut(s)	132, 1290
BtsIMutI	CAGTG	9 cut(s)	132, 1290, 1463, 1590, 1945, 2168, 2712, 2740, 2865
BveI	ACCTGC	1 cut(s)	2835
CciI	TCATGA	1 cut(s)	1270
CfoI	GCGC	3 cut(s)	1967, 2155, 2970
Cfr10I	RCCGGY	1 cut(s)	1641
Cfr13I	GGNCC	4 cut(s)	147, 348, 644, 1113
CseI	GACGC	2 cut(s)	1097, 2350
CsiI	ACCWGGT	1 cut(s)	640
Csp6I	GTAC	1 cut(s)	794
CviQI	GTAC	1 cut(s)	794
DinI	GGCGCC	1 cut(s)	1966
DpnI	GATC	8 cut(s)	303, 1010, 1381, 1432, 1480, 1737, 1760, 2674
DpnII	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
DrdI	GACNNNNNNGTC	1 cut(s)	1066
DseDI	GACNNNNNNGTC	1 cut(s)	1066
EaeI	YGGCCR	1 cut(s)	2487
Eam1104I	CTCTTC	2 cut(s)	384, 2454
EarI	CTCTTC	2 cut(s)	384, 2454
Ecl136II	GAGCTC	2 cut(s)	277, 2390
Eco130I	CCWWGG	3 cut(s)	492, 1338, 1968
Eco24I	GRGCYC	2 cut(s)	279, 2392
Eco32I	GATATC	1 cut(s)	1546
Eco47I	GGWCC	2 cut(s)	348, 644
Eco53kI	GAGCTC	2 cut(s)	277, 2390
Eco57I	CTGAAG	7 cut(s)	96, 159, 488, 564, 1092, 2310, 2432
Eco81I	CCTNAGG	1 cut(s)	314
Eco91I	GGTNACC	1 cut(s)	1346
EcoICRI	GAGCTC	2 cut(s)	277, 2390
EcoO109I	RGGNCCY	1 cut(s)	348
EcoO65I	GGTNACC	1 cut(s)	1346
EcoRI	GAATTC	3 cut(s)	1502, 1850, 2549
EcoRII	CCWGG	8 cut(s)	344, 640, 1015, 1032, 1350, 1560, 1779, 2208
EcoRV	GATATC	1 cut(s)	1546
EcoT14I	CCWWGG	3 cut(s)	492, 1338, 1968
EcoT38I	GRGCYC	2 cut(s)	279, 2392
EgeI	GGCGCC	1 cut(s)	1966
EheI	GGCGCC	1 cut(s)	1966
ErhI	CCWWGG	3 cut(s)	492, 1338, 1968
Esp3I	CGTCTC	3 cut(s)	1706, 2333, 2762
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	4 cut(s)	736, 748, 1320, 1681
FauI	CCCGC	2 cut(s)	762, 1593
FauNDI	CATATG	1 cut(s)	564
FokI	GGATG	7 cut(s)	173, 1049, 1196, 1240, 1832, 2732, 2833
FriOI	GRGCYC	2 cut(s)	279, 2392
FspBI	CTAG	8 cut(s)	485, 500, 738, 767, 1245, 1961, 2243, 2378
GlaI	GCGC	3 cut(s)	1966, 2154, 2969
GsaI	CCCAGC	1 cut(s)	1702
GsuI	CTGGAG	3 cut(s)	1038, 1214, 2192
HaeII	RGCGCY	1 cut(s)	1968
HaeIII	GGCC	5 cut(s)	149, 690, 1115, 1914, 2489
HapII	CCGG	4 cut(s)	145, 1642, 1817, 2133
HgaI	GACGC	2 cut(s)	1097, 2350
HhaI	GCGC	3 cut(s)	1967, 2155, 2970
Hin1I	GRCGYC	2 cut(s)	1089, 1965
Hin6I	GCGC	3 cut(s)	1965, 2153, 2968
HinP1I	GCGC	3 cut(s)	1965, 2153, 2968
HincII	GTYRAC	3 cut(s)	259, 2791, 2922
HindII	GTYRAC	3 cut(s)	259, 2791, 2922
HindIII	AAGCTT	6 cut(s)	590, 668, 873, 938, 2414, 2594
HpaII	CCGG	4 cut(s)	145, 1642, 1817, 2133
HphI	GGTGA	8 cut(s)	232, 1003, 1358, 1480, 1910, 2714, 2777, 2871
Hpy166II	GTNNAC	9 cut(s)	259, 743, 1618, 1943, 2080, 2712, 2791, 2797, 2922
Hpy8I	GTNNAC	9 cut(s)	259, 743, 1618, 1943, 2080, 2712, 2791, 2797, 2922
HpyAV	CCTTC	6 cut(s)	563, 744, 2038, 2635, 2699, 2768
HpyCH4III	ACNGT	4 cut(s)	1594, 1994, 2869, 3008
HpyCH4IV	ACGT	5 cut(s)	435, 616, 832, 1956, 2793
HpySE526I	ACGT	5 cut(s)	435, 616, 832, 1956, 2793
Hsp92I	GRCGYC	2 cut(s)	1089, 1965
HspAI	GCGC	3 cut(s)	1965, 2153, 2968
KasI	GGCGCC	1 cut(s)	1964
Kpn2I	TCCGGA	1 cut(s)	1816
Kzo9I	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
LmnI	GCTCC	2 cut(s)	496, 1235
LweI	GCATC	9 cut(s)	852, 1027, 1264, 1364, 1618, 1751, 2483, 2572, 2982
MabI	ACCWGGT	1 cut(s)	640
MaeI	CTAG	8 cut(s)	485, 500, 738, 767, 1245, 1961, 2243, 2378
MaeII	ACGT	5 cut(s)	435, 616, 832, 1956, 2793
MalI	GATC	8 cut(s)	303, 1010, 1381, 1432, 1480, 1737, 1760, 2674
MboI	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
MflI	RGATCY	4 cut(s)	1379, 1430, 1735, 2672
MhlI	GDGCHC	3 cut(s)	169, 279, 2392
MlsI	TGGCCA	1 cut(s)	2489
MluNI	TGGCCA	1 cut(s)	2489
Mly113I	GGCGCC	1 cut(s)	1965
MlyI	GAGTC	9 cut(s)	112, 449, 1115, 1220, 1276, 2390, 2701, 2747, 2822
MmeI	TCCRAC	1 cut(s)	2874
Mox20I	TGGCCA	1 cut(s)	2489
MroI	TCCGGA	1 cut(s)	1816
MroXI	GAANNNNTTC	1 cut(s)	1905
MscI	TGGCCA	1 cut(s)	2489
MslI	CAYNNNNRTG	3 cut(s)	159, 530, 2478
Msp20I	TGGCCA	1 cut(s)	2489
MspA1I	CMGCKG	4 cut(s)	1408, 1459, 2347, 2588
MspCI	CTTAAG	2 cut(s)	200, 1888
MspI	CCGG	4 cut(s)	145, 1642, 1817, 2133
MspR9I	CCNGG	9 cut(s)	146, 346, 642, 1017, 1034, 1352, 1562, 1781, 2210
MvaI	CCWGG	8 cut(s)	346, 642, 1017, 1034, 1352, 1562, 1781, 2210
MvnI	CGCG	2 cut(s)	2153, 2970
NarI	GGCGCC	1 cut(s)	1965
NciI	CCSGG	1 cut(s)	146
NdeI	CATATG	1 cut(s)	564
NdeII	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
NlaIV	GGNNCC	5 cut(s)	1237, 1381, 1432, 1966, 2471
NmeAIII	GCCGAG	4 cut(s)	716, 2362, 2607, 2626
NmuCI	GTSAC	7 cut(s)	115, 396, 1288, 1346, 1637, 2373, 2382
NspI	RCATGY	4 cut(s)	35, 184, 763, 1925
NspV	TTCGAA	1 cut(s)	365
PaeI	GCATGC	2 cut(s)	35, 184
PagI	TCATGA	1 cut(s)	1270
PciI	ACATGT	1 cut(s)	759
PdmI	GAANNNNTTC	1 cut(s)	1905
PflMI	CCANNNNNTGG	1 cut(s)	2684
PfoI	TCCNGGA	1 cut(s)	1560
Ple19I	CGATCG	1 cut(s)	1481
PleI	GAGTC	9 cut(s)	112, 448, 1114, 1220, 1275, 2389, 2700, 2747, 2821
PluTI	GGCGCC	1 cut(s)	1968
PpsI	GAGTC	9 cut(s)	112, 448, 1114, 1220, 1275, 2389, 2700, 2747, 2821
Ppu21I	YACGTR	1 cut(s)	617
PpuMI	RGGWCCY	1 cut(s)	348
PscI	ACATGT	1 cut(s)	759
Psp124BI	GAGCTC	2 cut(s)	279, 2392
Psp1406I	AACGTT	3 cut(s)	435, 832, 1956
Psp5II	RGGWCCY	1 cut(s)	348
Psp6I	CCWGG	8 cut(s)	344, 640, 1015, 1032, 1350, 1560, 1779, 2208
PspEI	GGTNACC	1 cut(s)	1346
PspFI	CCCAGC	1 cut(s)	1698
PspGI	CCWGG	8 cut(s)	344, 640, 1015, 1032, 1350, 1560, 1779, 2208
PspN4I	GGNNCC	5 cut(s)	1237, 1381, 1432, 1966, 2471
PspPI	GGNCC	4 cut(s)	147, 348, 644, 1113
PspPPI	RGGWCCY	1 cut(s)	348
PsuI	RGATCY	4 cut(s)	1379, 1430, 1735, 2672
PvuI	CGATCG	1 cut(s)	1481
PvuII	CAGCTG	3 cut(s)	1408, 1459, 2347
RsaI	GTAC	1 cut(s)	795
RsaNI	GTAC	1 cut(s)	794
RseI	CAYNNNNRTG	3 cut(s)	159, 530, 2478
SacI	GAGCTC	2 cut(s)	279, 2392
Sau3AI	GATC	8 cut(s)	301, 1008, 1379, 1430, 1478, 1735, 1758, 2672
Sau96I	GGNCC	4 cut(s)	147, 348, 644, 1113
SchI	GAGTC	9 cut(s)	112, 449, 1115, 1220, 1276, 2390, 2701, 2747, 2822
ScrFI	CCNGG	9 cut(s)	146, 346, 642, 1017, 1034, 1352, 1562, 1781, 2210
SduI	GDGCHC	3 cut(s)	169, 279, 2392
SexAI	ACCWGGT	1 cut(s)	640
SfaNI	GCATC	9 cut(s)	852, 1027, 1264, 1364, 1618, 1751, 2483, 2572, 2982
SfcI	CTRYAG	1 cut(s)	977
SfoI	GGCGCC	1 cut(s)	1966
SfuI	TTCGAA	1 cut(s)	365
SinI	GGWCC	2 cut(s)	348, 644
SmiMI	CAYNNNNRTG	3 cut(s)	159, 530, 2478
SmlI	CTYRAG	3 cut(s)	200, 671, 1888
SmoI	CTYRAG	3 cut(s)	200, 671, 1888
SphI	GCATGC	2 cut(s)	35, 184
SspDI	GGCGCC	1 cut(s)	1964
SspMI	CTAG	8 cut(s)	485, 500, 738, 767, 1245, 1961, 2243, 2378
SstI	GAGCTC	2 cut(s)	279, 2392
StyD4I	CCNGG	9 cut(s)	144, 344, 640, 1015, 1032, 1350, 1560, 1779, 2208
StyI	CCWWGG	3 cut(s)	492, 1338, 1968
TaaI	ACNGT	4 cut(s)	1594, 1994, 2869, 3008
TaiI	ACGT	5 cut(s)	438, 619, 835, 1959, 2796
TaqI	TCGA	6 cut(s)	279, 365, 709, 1058, 1229, 1481
TatI	WGTACW	1 cut(s)	793
TauI	GCSGC	6 cut(s)	152, 187, 491, 1298, 2153, 2973
TscAI	CASTG	9 cut(s)	139, 1297, 1470, 1597, 1945, 2175, 2719, 2740, 2872
TseFI	GTSAC	7 cut(s)	115, 396, 1288, 1346, 1637, 2373, 2382
Tsp45I	GTSAC	7 cut(s)	115, 396, 1288, 1346, 1637, 2373, 2382
TspGWI	ACGGA	4 cut(s)	1535, 2231, 2513, 2786
TspRI	CASTG	9 cut(s)	139, 1297, 1470, 1597, 1945, 2175, 2719, 2740, 2872
Van91I	CCANNNNNTGG	1 cut(s)	2684
Vha464I	CTTAAG	2 cut(s)	200, 1888
VpaK11BI	GGWCC	2 cut(s)	348, 644
XapI	RAATTY	7 cut(s)	504, 818, 1502, 1850, 1901, 1949, 2549
XbaI	TCTAGA	1 cut(s)	2242
XceI	RCATGY	4 cut(s)	35, 184, 763, 1925
XcmI	CCANNNNNNNNNTGG	2 cut(s)	16, 614
XmnI	GAANNNNTTC	1 cut(s)	1905
XspI	CTAG	8 cut(s)	485, 500, 738, 767, 1245, 1961, 2243, 2378

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.