Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr15

Orthogroup ID

OG0007254

Physical Location & Seq

Genomic Coordinates Reverse (-)

683102 .. 686805

Gene Structure 3704 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom15g01230.4

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2931 bp

ATGACTACTAAAGAGAGCTTGGTTAAACAGCATGCTAAAGTTGCCGAAGAAGCTGTCTCAGGATGGGAAAAGGCTGAAGCAGAGGCTCTGGCATTAAAAAATCATCTAGAATCTGTGACTCTTTTGAAGCTCACAGCTGAAGATCGGGCCTCACATTTGGATGGTGCTCTTAAAGAGTGCATGCGGCAGATACGAAATATGAAGGAAGAACATGAGCAGAAGATACAAGACGTTGTTTTCACCAAAAACAAGCAATGTGACAAAATTAAGCATGAGCTTGAAGCAAAGATAGCTAATTTGGATCAAGAACTCCTAAGGTCTGCTGCTGAAAATGCTGCTATTTCCAGGTCTTTACAAGAGCGTTCAAATATGCTATTCAAGATAAGCGAAGAGAAGTCACAAGCTGAGGCGGAAATTGAGCATTTTAAGGGCAACATTGAGTCTTGTGAAAGGGAAATAAATTCTCTGAAGTATGAACTGCATATAGCCGCCAAGGAGCTAGAAATTCGGAATGAAGAAAAGAACATGAGTATGAGGTCTGCTGAAGCAGCCAACAAGCAGCACGTGGAAGGCGTTAAAAAAGTCGCTAAGCTTGAAGCAGAGTGTCAAAGATTACGCGGTCTTGTGCGGAAAAAGTTACCTGGTCCTGCTGCACTTGCACAAATGAAGCTAGAGGTTGAGAGTTTAGGCCGAGATTATGGAGAAACTCGACTAAAGAAGTCTCCTGTTAAGCCTTCCAGTCCACACATGTCCCCACACATGTCCCCAGTGACTGAGTTTTCTCTTGATAATGTACAGAAGTTTCAAAAGGAGAATGAATTTCTGACAGAACGTTTATTAGCTATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAGCGTAACAGTGAATTGCTGGATTCAAGGAGTATGTGTGCTCAGACAGCCAGCAAACTTCAAACATTAGAAGCACAACTTCAAATCCACAATTTACAGAAAAGCTCACCAAAATCTGTTGTCCAGATCACCTCTGGAGTTTCATCAAGCCAGAATGCAAGCAATCCACCAAGCTTGACCTCCCTGTCCGAAGATGGTAATGATGATACCAGAAGCTGTGCTGAGTCTTCGGGCACAACATTGGAAAAGAACAATGCAAAGTCAAACAAATCTGAAAGTCAAAAGGATTTGAATCTTATGGATGACTTTCTGGAGATGGAGAAGTTGGCTTGTTTGCCAAATGACTCAAATGGAGCCGTCTCTGTTGCAGATGGTCCAAATAGGAAGACATCCGAAAGAGAGAGTGATGGTGCTTTAGGAGATGTCACTGCTGACAAAGATATCCCGTCTGAACAGCAGCATGAATTGCCAGGATCCCATCCCGAATCTGATGAAAGCCAGCTGCCACTGGTGAAGCTCCGATCAAGAATCTCAATGCTCTTGGAGTTCTCATCTAAGGACACTGATTTTGGGAAAGTTATTGAGGATATCAAACACGTAGTCCAGGAAGCACAGGAGAATCTATACCCGCACACTGTAAACTGTGTTTCCGAGGAAGTTGACAGCTCTGATGCCCTATGTGACCGGCAGGCAAATCCTGATGATTCTGGTTTAACCACAGAAAAGGAAATCACTTTGTCCCAGCCAGCCACAGAGACCATGAAAATAATAAGCGAAGATCTGGCATCTGCCATTTCATTGATCCATGACTTTGTGCTGTTATTGGGCAAAGAAGTGATGGAAGTGCATGACACAGTTCCAGATGGCAATGGATTCAACCAAAAGATTGAAGGATTCTCTGGCACATTTAGTAAAGTTATTCACGGAAACTTAAGTTTGGGTGAATTTGTTCTTGGCCTTTCACATGTTTTAGCAAACGCCACTGAACTCAAATTCAACGTTCTAGGCTTCAAGGGTGTTGAATCAGAAACTAACAGTCCTGATTGTATTGACAAGGTAGCATTACCAGAGAATAAGGTAGTTGAGAAGGATTCATCGCAAAGATTTCAAAATGATTGTGTCCACATTTCTAATCATTCTAACCCTGAAGTTCCTGATGATGGAAATCTTGTCTCCGGCTATGAACCAAATGCGGTGCCATGCAAAATCTCACTGGAGGAGTTTGAACAAATGAAATCAGAGAAAGATAACCTGGCAACGGATTTGGCAAGATGTTCTGAAACTCTAGAGATGACAAAGTCTCAATTACAGGAAACTGAGCAGCTTCTTGCTGAAGCTAAATCACAATTTGCTTCTGCTAAAAATTCAAATAGCTTAGCCGAAACGCAGCTGAAATGTATGGCAGAATCATACAGGTCACTAGAGTCACGAGCTCAGGAGTTAGAAACTGAATTGAATCTTCTGCGTGTCAGAACCGATACTCTGGAAAGTGAGCTACAAGAAGAGAAAGGGAACCATCAAGATGCTTTGGCCAGATGCATGGAACTTCAAGATCAGTTGAAAAGCATTGAGCGTTTGGAAGCTGAGACTGAATTCAAGACAAAGCAGGACAGGGAGTTGGCAGATGCAGCGGAGAAGCTTGTCGAGTGTCAAGAAACCATATATCTTCTTGGCAAACAATTGAAAGCATTGCACCCTCAAACAGAGGTCATGGGCTCTCCGTACAGTGAGAGGAGTCAACGGTTCACTGAGGATGAACCCACTTCCAGTTCCAAGAACTTGCAAGACTCGGAAAAAGGTGAGACGGAAGGCACTTCTTCTGCCAATGTAAACAGGGCGGGCAGCGAGTCTCCCATCAACCTGTATAACTCTGCATGCCCATCGGACGCAGAGGCAGGCATACACTTAAAATCACCAGTCAGTTCCAAAAGTCCGAAACACAGGTCTTCCAAGTCAACTTCCTCATCTACGTCTTCTACCCCAACACCAGAGAAACATCAGCGTGGCTTCAGCAGATTCTTCTCCTCGAAAGGAAAGAACGGTTATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000226 GO:0000902 GO:0000904 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005623 GO:0005886 GO:0006996 GO:0007010 GO:0007017 GO:0008017 GO:0008092 GO:0008150 GO:0009653 GO:0009888 GO:0009987 GO:0010026 GO:0010090 GO:0015631 GO:0016020 GO:0016043 GO:0022607 GO:0030154 GO:0031109 GO:0032502 GO:0032989 GO:0034622 GO:0043933 GO:0044085 GO:0044464 GO:0046785 GO:0048468 GO:0048856 GO:0048869 GO:0051258 GO:0065003 GO:0071840 GO:0071944 GO:0090558 GO:0090626 GO:0097435

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

FPP

Protein Analysis

977

Amino Acids

108.16

Weight (kDa)

5.13

Isoelectric Point (pI)

54.4

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007254)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G19835 AT1G19835 AT1G19835 AT1G19835 AT1G19835 AT1G19835
fragaria_vesca	FvH4_2g38730 FvH4_2g38730 FvH4_2g38730
malus_domestica	MD08G1015000.v1.1
prunus_persica	Prupe.1G368000_v2.0.a1 Prupe.1G368000_v2.0.a1 Prupe.1G368000_v2.0.a1
pyrus_communis	pycom08g01340 pycom15g01230
rosa_chinensis	RchiOBHm_Chr6g0302571
rosa_laevigata	RLG00000011160
rosa_multiflora	Rmu_sc0005455.1_g000013
rosa_roxburghii	Rroxscaffold_7G00165600
rosa_rugosa	Rorug06G0315100
rosa_samantha	Rh6AG428500 Rh6BG474100 Rh6CG440700 Rh6DG427500
rosa_wichuraiana	Rw6G037070

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1066
AccB1I	GGYRCC	1 cut(s)	2077
AccII	CGCG	1 cut(s)	618
AciI	CCGC	9 cut(s)	184, 410, 489, 618, 628, 1511, 2075, 2513, 2720
AclI	AACGTT	2 cut(s)	832, 1881
AclWI	GGATC	4 cut(s)	309, 1350, 1363, 1678
AcoI	YGGCCR	1 cut(s)	2412
AcsI	RAATTY	7 cut(s)	460, 504, 818, 1826, 1874, 2245, 2474
AcuI	CTGAAG	7 cut(s)	96, 159, 488, 564, 2049, 2235, 2875
AcvI	CACGTG	1 cut(s)	565
AfaI	GTAC	2 cut(s)	795, 2606
AfiI	CCNNNNNNNGG	2 cut(s)	2042, 2140
AflII	CTTAAG	1 cut(s)	1813
AflIII	ACRYGT	4 cut(s)	747, 759, 1477, 1846
AjnI	CCWGG	5 cut(s)	344, 640, 1351, 1485, 2133
AjuI	GAANNNNNNNTTGG	4 cut(s)	860, 892, 1818, 1850
Alw21I	GWGCWC	3 cut(s)	169, 925, 2317
Alw26I	GTCTC	9 cut(s)	61, 726, 1246, 1631, 2059, 2187, 2462, 2678, 2736
AlwI	GGATC	4 cut(s)	309, 1350, 1363, 1678
AlwNI	CAGNNNCTG	2 cut(s)	773, 1098
AoxI	GGCC	4 cut(s)	147, 688, 1837, 2412
ApoI	RAATTY	7 cut(s)	460, 504, 818, 1826, 1874, 2245, 2474
ArsI	GACNNNNNNTTYG	8 cut(s)	39, 71, 1433, 1465, 1467, 1499, 2810, 2842
Asp700I	GAANNNNTTC	1 cut(s)	1830
AspS9I	GGNCC	3 cut(s)	147, 644, 1256
AsuHPI	GGTGA	7 cut(s)	232, 981, 1003, 1405, 1835, 2693, 2787
AvaII	GGWCC	2 cut(s)	644, 1256
AxyI	CCTNAGG	1 cut(s)	314
BaeGI	GKGCMC	1 cut(s)	1118
BalI	TGGCCA	1 cut(s)	2414
BamHI	GGATCC	1 cut(s)	1355
BanI	GGYRCC	1 cut(s)	2077
BanII	GRGCYC	2 cut(s)	2317, 2600
BauI	CACGAG	1 cut(s)	2310
BbrPI	CACGTG	1 cut(s)	565
BbsI	GAAGAC	4 cut(s)	1101, 1274, 2820, 2847
Bbv12I	GWGCWC	3 cut(s)	169, 925, 2317
BbvCI	CCTCAGC	1 cut(s)	405
BceAI	ACGGC	1 cut(s)	1223
BcgI	CGANNNNNNTGC	2 cut(s)	2745, 2779
BciT130I	CCWGG	5 cut(s)	346, 642, 1353, 1487, 2135
BcoDI	GTCTC	9 cut(s)	61, 726, 1246, 1631, 2059, 2187, 2462, 2678, 2736
BfaI	CTAG	6 cut(s)	107, 500, 671, 1886, 2168, 2303
BfrI	CTTAAG	1 cut(s)	1813
BglII	AGATCT	1 cut(s)	1660
BlpI	GCTNAGC	2 cut(s)	588, 2257
Bme1390I	CCNGG	5 cut(s)	346, 642, 1353, 1487, 2135
Bme18I	GGWCC	2 cut(s)	644, 1256
BmgT120I	GGNCC	3 cut(s)	147, 644, 1256
BmiI	GGNNCC	4 cut(s)	1237, 1357, 2079, 2396
BmrFI	CCNGG	5 cut(s)	346, 642, 1353, 1487, 2135
BmrI	ACTGGG	1 cut(s)	761
BmsI	GCATC	6 cut(s)	852, 1543, 1676, 2395, 2408, 2497
BmuI	ACTGGG	1 cut(s)	761
BpiI	GAAGAC	4 cut(s)	1101, 1274, 2820, 2847
BpmI	CTGGAG	3 cut(s)	1038, 1214, 2117
Bpu10I	CCTNAGC	2 cut(s)	405, 2316
Bpu1102I	GCTNAGC	2 cut(s)	588, 2257
BsaAI	YACGTR	2 cut(s)	565, 1480
BsaBI	GATNNNNATC	2 cut(s)	1173, 2046
BsaI	GGTCTC	1 cut(s)	1631
BsaJI	CCNNGG	2 cut(s)	492, 1533
BsaXI	ACNNNNNCTCC	2 cut(s)	904, 934
Bsc4I	CCNNNNNNNGG	2 cut(s)	2042, 2140
Bse118I	RCCGGY	1 cut(s)	1566
Bse1I	ACTGG	6 cut(s)	738, 767, 1395, 2100, 2649, 2798
Bse21I	CCTNAGG	1 cut(s)	314
Bse3DI	GCAATG	3 cut(s)	260, 1756, 2570
Bse8I	GATNNNNATC	2 cut(s)	1173, 2046
BseBI	CCWGG	5 cut(s)	346, 642, 1353, 1487, 2135
BseDI	CCNNGG	2 cut(s)	492, 1533
BseGI	GGATG	6 cut(s)	68, 166, 1189, 1271, 1360, 2641
BseJI	GATNNNNATC	2 cut(s)	1173, 2046
BseLI	CCNNNNNNNGG	2 cut(s)	2042, 2140
BseMI	GCAATG	3 cut(s)	260, 1756, 2570
BseMII	CTCAG	9 cut(s)	72, 396, 765, 938, 1095, 2190, 2330, 2457, 2622
BseNI	ACTGG	6 cut(s)	738, 767, 1395, 2100, 2649, 2798
BseRI	GAGGAG	3 cut(s)	2114, 2629, 2896
BseSI	GKGCMC	1 cut(s)	1118
BseYI	CCCAGC	1 cut(s)	1623
BsgI	GTGCAG	1 cut(s)	636
Bsh1236I	CGCG	1 cut(s)	618
BshFI	GGCC	4 cut(s)	149, 690, 1839, 2414
BshNI	GGYRCC	1 cut(s)	2077
BsiHKAI	GWGCWC	3 cut(s)	169, 925, 2317
BsiSI	CCGG	2 cut(s)	1567, 2058
BslFI	GGGAC	3 cut(s)	736, 748, 1606
BslI	CCNNNNNNNGG	2 cut(s)	2042, 2140
BsmAI	GTCTC	9 cut(s)	61, 726, 1246, 1631, 2059, 2187, 2462, 2678, 2736
BsmBI	CGTCTC	2 cut(s)	1246, 2678
BsmFI	GGGAC	3 cut(s)	736, 748, 1606
BsmI	GAATGC	1 cut(s)	1042
BsnI	GGCC	4 cut(s)	149, 690, 1839, 2414
Bso31I	GGTCTC	1 cut(s)	1631
Bsp1286I	GDGCHC	5 cut(s)	169, 925, 1118, 2317, 2600
Bsp1407I	TGTACA	1 cut(s)	793
Bsp143I	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
Bsp1720I	GCTNAGC	2 cut(s)	588, 2257
BspACI	CCGC	9 cut(s)	184, 410, 489, 618, 628, 1511, 2075, 2513, 2720
BspANI	GGCC	4 cut(s)	149, 690, 1839, 2414
BspCNI	CTCAG	9 cut(s)	71, 397, 766, 937, 1096, 2191, 2329, 2458, 2623
BspFNI	CGCG	1 cut(s)	618
BspLI	GGNNCC	4 cut(s)	1237, 1357, 2079, 2396
BspPI	GGATC	4 cut(s)	309, 1350, 1363, 1678
BspT107I	GGYRCC	1 cut(s)	2077
BspTI	CTTAAG	1 cut(s)	1813
BspTNI	GGTCTC	1 cut(s)	1631
BsrDI	GCAATG	3 cut(s)	260, 1756, 2570
BsrFI	RCCGGY	1 cut(s)	1566
BsrGI	TGTACA	1 cut(s)	793
BsrI	ACTGG	6 cut(s)	738, 767, 1395, 2100, 2649, 2798
BssAI	RCCGGY	1 cut(s)	1566
BssECI	CCNNGG	2 cut(s)	492, 1533
BssMI	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
BssSI	CACGAG	1 cut(s)	2310
BssT1I	CCWWGG	1 cut(s)	492
Bst2BI	CACGAG	1 cut(s)	2310
Bst2UI	CCWGG	5 cut(s)	346, 642, 1353, 1487, 2135
Bst4CI	ACNGT	8 cut(s)	893, 1519, 1526, 1738, 1919, 2609, 2625, 2924
Bst6I	CTCTTC	2 cut(s)	384, 2379
BstAFI	CTTAAG	1 cut(s)	1813
BstAPI	GCANNNNNTGC	1 cut(s)	1348
BstAUI	TGTACA	1 cut(s)	793
BstBAI	YACGTR	2 cut(s)	565, 1480
BstF5I	GGATG	6 cut(s)	68, 166, 1189, 1271, 1360, 2641
BstFNI	CGCG	1 cut(s)	618
BstKTI	GATC	8 cut(s)	145, 304, 1011, 1358, 1406, 1663, 1686, 2437
BstMAI	GTCTC	9 cut(s)	61, 726, 1246, 1631, 2059, 2187, 2462, 2678, 2736
BstMBI	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
BstMWI	GCNNNNNNNGC	9 cut(s)	41, 50, 290, 332, 548, 656, 929, 1348, 2510
BstNI	CCWGG	5 cut(s)	346, 642, 1353, 1487, 2135
BstNSI	RCATGY	6 cut(s)	35, 184, 751, 763, 1850, 2760
BstSCI	CCNGG	5 cut(s)	344, 640, 1351, 1485, 2133
BstSLI	GKGCMC	1 cut(s)	1118
BstUI	CGCG	1 cut(s)	618
BstV2I	GAAGAC	4 cut(s)	1101, 1274, 2820, 2847
BstX2I	RGATCY	2 cut(s)	1355, 1660
BstXI	CCANNNNNNTGG	1 cut(s)	2422
BstYI	RGATCY	2 cut(s)	1355, 1660
Bsu36I	CCTNAGG	1 cut(s)	314
BsuRI	GGCC	4 cut(s)	149, 690, 1839, 2414
BtgZI	GCGATG	1 cut(s)	1962
BtsCI	GGATG	6 cut(s)	68, 166, 1189, 1271, 1360, 2641
BtsI	GCAGTG	1 cut(s)	1308
CaiI	CAGNNNCTG	2 cut(s)	773, 1098
Cfr10I	RCCGGY	1 cut(s)	1566
Cfr13I	GGNCC	3 cut(s)	147, 644, 1256
CseI	GACGC	1 cut(s)	2777
CsiI	ACCWGGT	1 cut(s)	640
Csp6I	GTAC	2 cut(s)	794, 2605
CspCI	CAANNNNNGTGG	2 cut(s)	1038, 1073
CviQI	GTAC	2 cut(s)	794, 2605
DpnI	GATC	8 cut(s)	144, 303, 1010, 1357, 1405, 1662, 1685, 2436
DpnII	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
DrdI	GACNNNNNNGTC	1 cut(s)	1066
DseDI	GACNNNNNNGTC	1 cut(s)	1066
EaeI	YGGCCR	1 cut(s)	2412
Eam1104I	CTCTTC	2 cut(s)	384, 2379
EarI	CTCTTC	2 cut(s)	384, 2379
EciI	GGCGGA	1 cut(s)	425
Ecl136II	GAGCTC	1 cut(s)	2315
Eco130I	CCWWGG	1 cut(s)	492
Eco24I	GRGCYC	2 cut(s)	2317, 2600
Eco31I	GGTCTC	1 cut(s)	1631
Eco32I	GATATC	2 cut(s)	1324, 1471
Eco47I	GGWCC	2 cut(s)	644, 1256
Eco53kI	GAGCTC	1 cut(s)	2315
Eco57I	CTGAAG	7 cut(s)	96, 159, 488, 564, 2049, 2235, 2875
Eco72I	CACGTG	1 cut(s)	565
Eco81I	CCTNAGG	1 cut(s)	314
EcoICRI	GAGCTC	1 cut(s)	2315
EcoRI	GAATTC	1 cut(s)	2474
EcoRII	CCWGG	5 cut(s)	344, 640, 1351, 1485, 2133
EcoRV	GATATC	2 cut(s)	1324, 1471
EcoT14I	CCWWGG	1 cut(s)	492
EcoT22I	ATGCAT	1 cut(s)	2423
EcoT38I	GRGCYC	2 cut(s)	2317, 2600
ErhI	CCWWGG	1 cut(s)	492
Esp3I	CGTCTC	2 cut(s)	1246, 2678
FalI	AAGNNNNNCTT	2 cut(s)	945, 977
FaqI	GGGAC	3 cut(s)	736, 748, 1606
FauI	CCCGC	2 cut(s)	1518, 2713
FokI	GGATG	6 cut(s)	75, 173, 1196, 1258, 1347, 2648
FriOI	GRGCYC	2 cut(s)	2317, 2600
FspBI	CTAG	6 cut(s)	107, 500, 671, 1886, 2168, 2303
GsaI	CCCAGC	1 cut(s)	1627
GsuI	CTGGAG	3 cut(s)	1038, 1214, 2117
HaeIII	GGCC	4 cut(s)	149, 690, 1839, 2414
HapII	CCGG	2 cut(s)	1567, 2058
HgaI	GACGC	1 cut(s)	2777
HincII	GTYRAC	3 cut(s)	1543, 2621, 2838
HindII	GTYRAC	3 cut(s)	1543, 2621, 2838
HindIII	AAGCTT	4 cut(s)	590, 873, 1054, 2519
HpaII	CCGG	2 cut(s)	1567, 2058
HphI	GGTGA	7 cut(s)	232, 981, 1003, 1405, 1835, 2693, 2787
Hpy166II	GTNNAC	8 cut(s)	743, 1522, 1543, 2005, 2621, 2628, 2713, 2838
Hpy8I	GTNNAC	8 cut(s)	743, 1522, 1543, 2005, 2621, 2628, 2713, 2838
HpyAV	CCTTC	6 cut(s)	196, 563, 744, 1766, 1963, 2684
HpyCH4III	ACNGT	8 cut(s)	893, 1519, 1526, 1738, 1919, 2609, 2625, 2924
HpyCH4IV	ACGT	6 cut(s)	231, 564, 832, 1479, 1881, 2852
HpyF10VI	GCNNNNNNNGC	9 cut(s)	41, 50, 290, 332, 548, 656, 929, 1348, 2510
HpySE526I	ACGT	6 cut(s)	231, 564, 832, 1479, 1881, 2852
Kzo9I	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
LmnI	GCTCC	3 cut(s)	496, 1235, 1404
LweI	GCATC	6 cut(s)	852, 1543, 1676, 2395, 2408, 2497
MabI	ACCWGGT	1 cut(s)	640
MaeI	CTAG	6 cut(s)	107, 500, 671, 1886, 2168, 2303
MaeII	ACGT	6 cut(s)	231, 564, 832, 1479, 1881, 2852
MalI	GATC	8 cut(s)	144, 303, 1010, 1357, 1405, 1662, 1685, 2436
MboI	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
MfeI	CAATTG	1 cut(s)	2561
MflI	RGATCY	2 cut(s)	1355, 1660
MhlI	GDGCHC	5 cut(s)	169, 925, 1118, 2317, 2600
MlsI	TGGCCA	1 cut(s)	2414
MluNI	TGGCCA	1 cut(s)	2414
MlyI	GAGTC	8 cut(s)	112, 449, 1115, 1220, 2315, 2626, 2663, 2738
Mox20I	TGGCCA	1 cut(s)	2414
Mph1103I	ATGCAT	1 cut(s)	2423
MroXI	GAANNNNTTC	1 cut(s)	1830
MscI	TGGCCA	1 cut(s)	2414
MslI	CAYNNNNRTG	4 cut(s)	159, 530, 2403, 2883
Msp20I	TGGCCA	1 cut(s)	2414
MspA1I	CMGCKG	4 cut(s)	137, 1384, 2272, 2513
MspCI	CTTAAG	1 cut(s)	1813
MspI	CCGG	2 cut(s)	1567, 2058
MspR9I	CCNGG	5 cut(s)	346, 642, 1353, 1487, 2135
MunI	CAATTG	1 cut(s)	2561
Mva1269I	GAATGC	1 cut(s)	1042
MvaI	CCWGG	5 cut(s)	346, 642, 1353, 1487, 2135
MvnI	CGCG	1 cut(s)	618
MwoI	GCNNNNNNNGC	9 cut(s)	41, 50, 290, 332, 548, 656, 929, 1348, 2510
NdeII	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
NlaIV	GGNNCC	4 cut(s)	1237, 1357, 2079, 2396
NmeAIII	GCCGAG	1 cut(s)	716
NmuCI	GTSAC	8 cut(s)	115, 257, 396, 769, 1306, 1562, 2298, 2307
NsiI	ATGCAT	1 cut(s)	2423
NspI	RCATGY	6 cut(s)	35, 184, 751, 763, 1850, 2760
PaeI	GCATGC	3 cut(s)	35, 184, 2760
PciI	ACATGT	3 cut(s)	747, 759, 1846
PcsI	WCGNNNNNNNCGW	1 cut(s)	570
PctI	GAATGC	1 cut(s)	1042
PdmI	GAANNNNTTC	1 cut(s)	1830
PflFI	GACNNNGTC	1 cut(s)	2179
PfoI	TCCNGGA	1 cut(s)	1485
PleI	GAGTC	8 cut(s)	112, 448, 1114, 1220, 2314, 2625, 2663, 2737
PmaCI	CACGTG	1 cut(s)	565
PmlI	CACGTG	1 cut(s)	565
PpsI	GAGTC	8 cut(s)	112, 448, 1114, 1220, 2314, 2625, 2663, 2737
Ppu21I	YACGTR	2 cut(s)	565, 1480
PscI	ACATGT	3 cut(s)	747, 759, 1846
Psp124BI	GAGCTC	1 cut(s)	2317
Psp1406I	AACGTT	2 cut(s)	832, 1881
Psp6I	CCWGG	5 cut(s)	344, 640, 1351, 1485, 2133
PspCI	CACGTG	1 cut(s)	565
PspFI	CCCAGC	1 cut(s)	1623
PspGI	CCWGG	5 cut(s)	344, 640, 1351, 1485, 2133
PspN4I	GGNNCC	4 cut(s)	1237, 1357, 2079, 2396
PspPI	GGNCC	3 cut(s)	147, 644, 1256
PstNI	CAGNNNCTG	2 cut(s)	773, 1098
PsuI	RGATCY	2 cut(s)	1355, 1660
PsyI	GACNNNGTC	1 cut(s)	2179
PvuII	CAGCTG	3 cut(s)	137, 1384, 2272
RsaI	GTAC	2 cut(s)	795, 2606
RsaNI	GTAC	2 cut(s)	794, 2605
RseI	CAYNNNNRTG	4 cut(s)	159, 530, 2403, 2883
SacI	GAGCTC	1 cut(s)	2317
Sau3AI	GATC	8 cut(s)	142, 301, 1008, 1355, 1403, 1660, 1683, 2434
Sau96I	GGNCC	3 cut(s)	147, 644, 1256
SchI	GAGTC	8 cut(s)	112, 449, 1115, 1220, 2315, 2626, 2663, 2738
ScrFI	CCNGG	5 cut(s)	346, 642, 1353, 1487, 2135
SduI	GDGCHC	5 cut(s)	169, 925, 1118, 2317, 2600
SexAI	ACCWGGT	1 cut(s)	640
SfaNI	GCATC	6 cut(s)	852, 1543, 1676, 2395, 2408, 2497
SinI	GGWCC	2 cut(s)	644, 1256
SmiMI	CAYNNNNRTG	4 cut(s)	159, 530, 2403, 2883
SmlI	CTYRAG	1 cut(s)	1813
SmoI	CTYRAG	1 cut(s)	1813
SphI	GCATGC	3 cut(s)	35, 184, 2760
SsiI	CCGC	9 cut(s)	184, 410, 489, 618, 628, 1511, 2075, 2513, 2720
SspMI	CTAG	6 cut(s)	107, 500, 671, 1886, 2168, 2303
SstI	GAGCTC	1 cut(s)	2317
StyD4I	CCNGG	5 cut(s)	344, 640, 1351, 1485, 2133
StyI	CCWWGG	1 cut(s)	492
TaaI	ACNGT	8 cut(s)	893, 1519, 1526, 1738, 1919, 2609, 2625, 2924
TaiI	ACGT	6 cut(s)	234, 567, 835, 1482, 1884, 2855
TaqI	TCGA	3 cut(s)	709, 2526, 2909
TatI	WGTACW	1 cut(s)	793
TauI	GCSGC	2 cut(s)	187, 491
TseFI	GTSAC	8 cut(s)	115, 257, 396, 769, 1306, 1562, 2298, 2307
Tsp45I	GTSAC	8 cut(s)	115, 257, 396, 769, 1306, 1562, 2298, 2307
TspGWI	ACGGA	4 cut(s)	1821, 2156, 2592, 2702
Tth111I	GACNNNGTC	1 cut(s)	2179
Vha464I	CTTAAG	1 cut(s)	1813
VpaK11BI	GGWCC	2 cut(s)	644, 1256
XapI	RAATTY	7 cut(s)	460, 504, 818, 1826, 1874, 2245, 2474
XbaI	TCTAGA	2 cut(s)	106, 2167
XceI	RCATGY	6 cut(s)	35, 184, 751, 763, 1850, 2760
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1013
XmnI	GAANNNNTTC	1 cut(s)	1830
XspI	CTAG	6 cut(s)	107, 500, 671, 1886, 2168, 2303
Zsp2I	ATGCAT	1 cut(s)	2423

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.