Rh6DG427500

Filament-like plant protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr6D
Physical Location & Seq
Forward (+)
60829183 .. 60834803
5621 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh6DG427500.1

Sequence Viewer

Length: 2943 bp
ATGGACCGACGGAGTTGGCCGTGGAAGAAAAAATCATCATCAGACAAAGCTGCAACCGAGAAGGCCTTAGCGGTAGCAGAGTCTGTGCCGACGCCTCAGGCAGAGAAAGATAACTACAAGAAACCAAATTATGTTCAACTTTCGGTGGAGCAATATTCGCATCTCACTGGTTTGGAGGATCAAGTGAAGAATTATGAGAGTCAAGTGAAGAATTATGAGAATCAAGTGAATGCATATGAGGATCAAGTGAAGACGTACGAGGACCAATTTCAGACATTGGAGGATCAAATTACAGATTTGAATGAACAGCTGTCCACAGCCCACTCAGAGATCAGTACCCAGGAGGGCCTCGTTAAACAGCATGCTAAAGTTGCCGAAGAAGCTGTGTCAGGTTGGGAAAAGGCTGAAGCCGAAGCTCTTGCGTTAAAAACTCATTTAGAATCTGTGACGCTTTTGAAGCTGACTGCTGAAGATCGGGCATCCCATTTAGATGGTGCTCTCAAAGAGTGCATGCGACAGATTAGAAATCTGAAGGAAGATCATGAACAGAAATTGCAAGAAGTTGTTTTCACCAAAACGAAGCAATGTGACAAAATCAAGCATGAGCTCGAAACAAGGATAGATAATTTAGACCAAGAGCTCCTAAGGTCTGCTGCTGAAAATGCTGCTATTTCAAGGTCTTTACAAGAGCGGTCAAACATGCTATACAAGATAAACGAAGAAAAGTCACAAGCTGAGGCAGAAATTGAGCGTTTCAAGAGCAACATTGAATCTTGTGAAAGGGAAATAAACTCTCTGAAATATGAACTTCATATTGCTTCCAAGGAGCTGGAAATTCGTACAGAGGAAAAGAACATGAGTGTGAGGTCTGCAGATGCAGCCAACAAGCAGCATATGGAGGGTGTGAAAAAAATAACTAAGCTAGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAGAAGTTGCCTGGTCCTGCTGCACTTGCCCAAATGAAGCTTGAGGTTGAGAGTTTAGGCCGAGATTATGGAGAAACTCGATTGAAGAGATCTCCTGTTAAGGCTTCTAGTCCACATATGTCCCAGGTGACTGAGTTTTCCCTTGACAATGTACAGAAGTTTCAGAAGGAGAATGAATTTCTGACAGAACGGTTATTAGCAATGGAAGAAGAAACAAAAATGCTTAAAGAAGCTTTGTCAAAACGTAACAGCGAATTGCAGGCTTCTAGGAGTATTTGTGCGAAGACAGTCAGCAAGCTTCAAGCATTAGAAGCACAGCTTCAAATCAGTGGTCAACAGAAAGGTTCCCCAACATCTGTTGTTCACATCACCACTGAAGGTTCCTTGAGTCAGAATGCAAGCAATCCACCAAGTTTCACCTCCATGTCTGAAGATGGAAATGATGATGACAGAAGCTGTGCTGAGTCTTGGGGCACAACATTGAACTCTGATGTCTCACACATCAAGAAGGAGAAGAACAATGAAAAGTCGAGCAAAGCTGAAAATCAAAATCATTTGAATCTTATGGATGACTTTCTGGAGATGGAGAAGTTGGCTTGCTTGCCTAATGACTCAAATGGAGATCTCTCTGTTTCAGATAGTCCAAACAATAAGACATCTGAAATAGAGACCAATGATGCATCAGGAGAAGTCACTGCCGCAAAAGATATACAATCTGAGCAGCAGCATGATTCAAGTCCACTGGCAAAGCATCAAGCATCTTCCAACGGGAACCTGACAGTGCTCAGCCCTGGAGCTAATGAAAACAAGCTGCCTCTGGTGAAGCTCCGATCAAGAATCTCGGTGCTGTTAGAGTTATTATCCAAGGACACTGATTTTGGTAAAGTTATTGAGGATATCAAGCATGTGGTTCAGGAAGCACAAGCTACTCTGCACCCTCACACTGTAAACTGTGTTTCTGAAGAAATTCACAGCTCTGATGCCATATGTGATAGGCAGGCACACCCTGAGGGCTCTGTTCTAACTACAGAAAAGGAAACCATGACTGCAATAACTGAAGAACTAGCATTTGCCATATCCTTGATCCATGACTTTGTGCTGCTCTTAGGAAAAAAAGTGGTGGGAGTGCATGACACATTTCCTGATGGCAATGAATTAAGTCAGAAGATTGAAGAATTTTCTGGCACATATAGTAAAGTTATTCATGGGAACTTGAGTTTGGTTGATTTGGTTCTTGACCTTTCTCATGTGTTAGCAAATGCCAGTGAACTCAAGTTTAATGTTATAGGTTTCCAGGGTGTTGAAGCAGGAAGGAATAGTCCTGATTGTATTGACAAGGTAGCCTTACCAGAGAATAAGGTAGTTGAGAAGGATTCATCAGAAAGATATCAAAATCATTGTGTCGACATTTCTAATCATTCTAACCCTGAAGTTCCTGATGATGGAAATCTAGTCTCCAGCTTTGGGTCAAATGCCACCCCATGCAAAATCTCAGTGGAGGAGTTTGAGCAATTGAAATCAGAGAAAGATAACCTGTCTATAGATTTGGCAAGATGCGCGGAAAATCTGGAGATGACTACGTCCAAGTTACAGGAAACCGAGCAGCTTCTTGCAGAAGCTAAAACACAATTTGCTTCTGCTCAAAATTCAAACAGCTTAAATGAGACGCAGCTGAAATGTATGGCAGAATCATACAGGTCACTGGAATCACGAGCCCATGAGTTAGAAACTGAACTGAAGCTACTACAAGTCAGAACTGAAACTCTGGAAAAGGAGCTGCAAGAAGAAAAGAGGAATCATCAAGATGCTTTGGCTAGATGCACAGAACTTCAAGAAGAGTTGAAAAGGCAGGAGACCTTAGCAGCCGAGACAGCAGCTGAGACGGAATTCAAGACCAAACAGGTTAGGCTACATTCACTTTGTCTAACATCCCATATTTTGAATAGGAAAATAAAAATAATAAGTTTTCCACCAAGGAATTAA

Protein Analysis

980

Amino Acids

109.84

Weight (kDa)

5.23

Isoelectric Point (pI)

49.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC39 PF24161 50 - 203 3.3e-07 Coiled-coil domain-containing protein 39
FPP PF05911 115 - 954 0.0 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 691
AccI GTMKAC 1 cut(s) 2364
AccII CGCG 1 cut(s) 2519
AciI CCGC 5 cut(s) 71, 691, 958, 1659, 2519
AclWI GGATC 4 cut(s) 186, 249, 291, 2038
AcoI YGGCCR 1 cut(s) 17
AcsI RAATTY 6 cut(s) 834, 1136, 1926, 2135, 2605, 2846
AcuI CTGAAG 9 cut(s) 426, 489, 551, 1356, 1410, 1941, 2037, 2409, 2717
AcyI GRCGYC 1 cut(s) 92
AfaI GTAC 4 cut(s) 257, 337, 841, 1113
AfiI CCNNNNNNNGG 2 cut(s) 2402, 2424
AjnI CCWGG 5 cut(s) 339, 970, 1083, 1750, 2253
AjuI GAANNNNNNNTTGG 2 cut(s) 2162, 2194
Alw21I GWGCWC 4 cut(s) 499, 609, 642, 1746
Alw26I GTCTC 7 cut(s) 1459, 1622, 2419, 2618, 2807, 2822, 2834
AlwI GGATC 4 cut(s) 186, 249, 291, 2038
AlwNI CAGNNNCTG 3 cut(s) 83, 1416, 2837
AoxI GGCC 4 cut(s) 17, 63, 346, 1018
ApoI RAATTY 6 cut(s) 834, 1136, 1926, 2135, 2605, 2846
ArsI GACNNNNNNTTYG 4 cut(s) 1276, 1308, 1820, 1852
Asp700I GAANNNNTTC 1 cut(s) 1926
AspLEI GCGC 1 cut(s) 2519
AspS9I GGNCC 4 cut(s) 4, 262, 346, 974
AsuHPI GGTGA 5 cut(s) 562, 1099, 1321, 1369, 1792
AvaII GGWCC 3 cut(s) 4, 262, 974
AxyI CCTNAGG 3 cut(s) 96, 644, 1968
BaeGI GKGCMC 1 cut(s) 1436
BanII GRGCYC 4 cut(s) 609, 642, 1976, 2677
BauI CACGAG 1 cut(s) 2670
BbsI GAAGAC 2 cut(s) 257, 1250
Bbv12I GWGCWC 4 cut(s) 499, 609, 642, 1746
BbvCI CCTCAGC 1 cut(s) 735
BccI CCATC 5 cut(s) 485, 1388, 1537, 2099, 2396
BceAI ACGGC 1 cut(s) 4
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 5 cut(s) 341, 972, 1085, 1752, 2255
BcoDI GTCTC 7 cut(s) 1459, 1622, 2419, 2618, 2807, 2822, 2834
BfaI CTAG 6 cut(s) 923, 1068, 1227, 2024, 2411, 2775
BfmI CTRYAG 3 cut(s) 870, 1986, 2499
BglII AGATCT 2 cut(s) 1049, 1582
BlpI GCTNAGC 1 cut(s) 1745
Bme1390I CCNGG 5 cut(s) 341, 972, 1085, 1752, 2255
Bme18I GGWCC 3 cut(s) 4, 262, 974
BmgT120I GGNCC 4 cut(s) 4, 262, 346, 974
BmiI GGNNCC 3 cut(s) 1306, 1342, 1733
BmrFI CCNGG 5 cut(s) 341, 972, 1085, 1752, 2255
BpiI GAAGAC 2 cut(s) 257, 1250
BpmI CTGGAG 4 cut(s) 1559, 1773, 2401, 2549
Bpu10I CCTNAGC 3 cut(s) 67, 735, 2818
Bpu1102I GCTNAGC 1 cut(s) 1745
BpuEI CTTGAG 4 cut(s) 1022, 1366, 2194, 2216
BsaAI YACGTR 1 cut(s) 947
BsaBI GATNNNNATC 1 cut(s) 2406
BsaHI GRCGYC 1 cut(s) 92
BsaI GGTCTC 2 cut(s) 1622, 2807
BsaJI CCNNGG 8 cut(s) 20, 339, 822, 1083, 1750, 1824, 2254, 2933
BsaXI ACNNNNNCTCC 2 cut(s) 1222, 1252
Bsc4I CCNNNNNNNGG 2 cut(s) 2402, 2424
Bse1I ACTGG 4 cut(s) 172, 1707, 2223, 2667
Bse21I CCTNAGG 3 cut(s) 96, 644, 1968
Bse3DI GCAATG 3 cut(s) 590, 1167, 2116
Bse8I GATNNNNATC 1 cut(s) 2406
BseBI CCWGG 5 cut(s) 341, 972, 1085, 1752, 2255
BseDI CCNNGG 8 cut(s) 20, 339, 822, 1083, 1750, 1824, 2254, 2933
BseGI GGATG 3 cut(s) 479, 1534, 2888
BseJI GATNNNNATC 1 cut(s) 2406
BseLI CCNNNNNNNGG 2 cut(s) 2402, 2424
BseMI GCAATG 3 cut(s) 590, 1167, 2116
BseNI ACTGG 4 cut(s) 172, 1707, 2223, 2667
BseRI GAGGAG 1 cut(s) 2474
BseSI GKGCMC 1 cut(s) 1436
BsgI GTGCAG 2 cut(s) 966, 1877
Bsh1236I CGCG 1 cut(s) 2519
BshFI GGCC 4 cut(s) 19, 65, 348, 1020
BsiHKAI GWGCWC 4 cut(s) 499, 609, 642, 1746
BsiWI CGTACG 1 cut(s) 255
BslFI GGGAC 1 cut(s) 1066
BslI CCNNNNNNNGG 2 cut(s) 2402, 2424
BsmAI GTCTC 7 cut(s) 1459, 1622, 2419, 2618, 2807, 2822, 2834
BsmBI CGTCTC 2 cut(s) 2618, 2834
BsmFI GGGAC 1 cut(s) 1066
BsmI GAATGC 2 cut(s) 235, 1360
BsnI GGCC 4 cut(s) 19, 65, 348, 1020
Bso31I GGTCTC 2 cut(s) 1622, 2807
Bsp1286I GDGCHC 7 cut(s) 499, 609, 642, 1436, 1746, 1976, 2677
Bsp1407I TGTACA 1 cut(s) 1111
Bsp1720I GCTNAGC 1 cut(s) 1745
BspACI CCGC 5 cut(s) 71, 691, 958, 1659, 2519
BspANI GGCC 4 cut(s) 19, 65, 348, 1020
BspFNI CGCG 1 cut(s) 2519
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 3 cut(s) 1306, 1342, 1733
BspMAI CTGCAG 1 cut(s) 874
BspPI GGATC 4 cut(s) 186, 249, 291, 2038
BspTNI GGTCTC 2 cut(s) 1622, 2807
BsrBI CCGCTC 1 cut(s) 691
BsrDI GCAATG 3 cut(s) 590, 1167, 2116
BsrGI TGTACA 1 cut(s) 1111
BsrI ACTGG 4 cut(s) 172, 1707, 2223, 2667
BssECI CCNNGG 8 cut(s) 20, 339, 822, 1083, 1750, 1824, 2254, 2933
BssNI GRCGYC 1 cut(s) 92
BssSI CACGAG 1 cut(s) 2670
BssT1I CCWWGG 3 cut(s) 822, 1824, 2933
Bst2BI CACGAG 1 cut(s) 2670
Bst2UI CCWGG 5 cut(s) 341, 972, 1085, 1752, 2255
Bst4CI ACNGT 5 cut(s) 1152, 1249, 1741, 1906, 1913
Bst6I CTCTTC 2 cut(s) 1040, 2790
BstACI GRCGYC 1 cut(s) 92
BstAUI TGTACA 1 cut(s) 1111
BstBAI YACGTR 1 cut(s) 947
BstC8I GCNNGC 8 cut(s) 363, 512, 1221, 1256, 1360, 1558, 1562, 1959
BstDSI CCRYGG 1 cut(s) 20
BstF5I GGATG 3 cut(s) 479, 1534, 2888
BstFNI CGCG 1 cut(s) 2519
BstHHI GCGC 1 cut(s) 2519
BstMAI GTCTC 7 cut(s) 1459, 1622, 2419, 2618, 2807, 2822, 2834
BstNI CCWGG 5 cut(s) 341, 972, 1085, 1752, 2255
BstNSI RCATGY 4 cut(s) 365, 514, 703, 1868
BstSCI CCNGG 5 cut(s) 339, 970, 1083, 1750, 2253
BstSFI CTRYAG 3 cut(s) 870, 1986, 2499
BstSLI GKGCMC 1 cut(s) 1436
BstUI CGCG 1 cut(s) 2519
BstV2I GAAGAC 2 cut(s) 257, 1250
BstX2I RGATCY 2 cut(s) 1049, 1582
BstXI CCANNNNNNTGG 2 cut(s) 491, 829
BstYI RGATCY 2 cut(s) 1049, 1582
Bsu36I CCTNAGG 3 cut(s) 96, 644, 1968
BsuRI GGCC 4 cut(s) 19, 65, 348, 1020
BtgI CCRYGG 1 cut(s) 20
BtsCI GGATG 3 cut(s) 479, 1534, 2888
BtsI GCAGTG 1 cut(s) 1653
Cac8I GCNNGC 8 cut(s) 363, 512, 1221, 1256, 1360, 1558, 1562, 1959
CaiI CAGNNNCTG 3 cut(s) 83, 1416, 2837
CciI TCATGA 1 cut(s) 541
CfoI GCGC 1 cut(s) 2519
Cfr13I GGNCC 4 cut(s) 4, 262, 346, 974
CseI GACGC 3 cut(s) 100, 457, 2635
Csp6I GTAC 4 cut(s) 256, 336, 840, 1112
CviQI GTAC 4 cut(s) 256, 336, 840, 1112
EaeI YGGCCR 1 cut(s) 17
Eam1104I CTCTTC 2 cut(s) 1040, 2790
EarI CTCTTC 2 cut(s) 1040, 2790
Ecl136II GAGCTC 2 cut(s) 607, 640
Eco130I CCWWGG 3 cut(s) 822, 1824, 2933
Eco147I AGGCCT 1 cut(s) 65
Eco24I GRGCYC 4 cut(s) 609, 642, 1976, 2677
Eco31I GGTCTC 2 cut(s) 1622, 2807
Eco32I GATATC 2 cut(s) 1858, 2348
Eco47I GGWCC 3 cut(s) 4, 262, 974
Eco53kI GAGCTC 2 cut(s) 607, 640
Eco57I CTGAAG 9 cut(s) 426, 489, 551, 1356, 1410, 1941, 2037, 2409, 2717
Eco81I CCTNAGG 3 cut(s) 96, 644, 1968
EcoICRI GAGCTC 2 cut(s) 607, 640
EcoO109I RGGNCCY 1 cut(s) 346
EcoRI GAATTC 1 cut(s) 2846
EcoRII CCWGG 5 cut(s) 339, 970, 1083, 1750, 2253
EcoRV GATATC 2 cut(s) 1858, 2348
EcoT14I CCWWGG 3 cut(s) 822, 1824, 2933
EcoT22I ATGCAT 2 cut(s) 235, 1642
EcoT38I GRGCYC 4 cut(s) 609, 642, 1976, 2677
ErhI CCWWGG 3 cut(s) 822, 1824, 2933
Esp3I CGTCTC 2 cut(s) 2618, 2834
FalI AAGNNNNNCTT 4 cut(s) 1263, 1295, 2288, 2320
FaqI GGGAC 1 cut(s) 1066
FauNDI CATATG 4 cut(s) 235, 894, 1077, 1946
FblI GTMKAC 1 cut(s) 2364
FokI GGATG 3 cut(s) 466, 1541, 2875
FriOI GRGCYC 4 cut(s) 609, 642, 1976, 2677
FspBI CTAG 6 cut(s) 923, 1068, 1227, 2024, 2411, 2775
GlaI GCGC 1 cut(s) 2518
GsuI CTGGAG 4 cut(s) 1559, 1773, 2401, 2549
HaeIII GGCC 4 cut(s) 19, 65, 348, 1020
HgaI GACGC 3 cut(s) 100, 457, 2635
HhaI GCGC 1 cut(s) 2519
Hin1I GRCGYC 1 cut(s) 92
Hin6I GCGC 1 cut(s) 2517
HinP1I GCGC 1 cut(s) 2517
HincII GTYRAC 2 cut(s) 1295, 2365
HindII GTYRAC 2 cut(s) 1295, 2365
HindIII AAGCTT 3 cut(s) 998, 1191, 1256
HphI GGTGA 5 cut(s) 562, 1099, 1321, 1369, 1792
Hpy166II GTNNAC 8 cut(s) 315, 1073, 1295, 1324, 1700, 1909, 2228, 2365
Hpy8I GTNNAC 8 cut(s) 315, 1073, 1295, 1324, 1700, 1909, 2228, 2365
Hpy99I CGWCG 2 cut(s) 12, 94
HpyAV CCTTC 7 cut(s) 55, 526, 1120, 1331, 1462, 2265, 2323
HpyCH4III ACNGT 5 cut(s) 1152, 1249, 1741, 1906, 1913
HpyCH4IV ACGT 4 cut(s) 254, 946, 1204, 2540
HpySE526I ACGT 4 cut(s) 254, 946, 1204, 2540
Hsp92I GRCGYC 1 cut(s) 92
HspAI GCGC 1 cut(s) 2517
LmnI GCTCC 6 cut(s) 148, 645, 826, 1754, 1791, 2734
MaeI CTAG 6 cut(s) 923, 1068, 1227, 2024, 2411, 2775
MaeII ACGT 4 cut(s) 254, 946, 1204, 2540
MaeIII GTNAC 8 cut(s) 445, 587, 726, 1087, 1205, 1651, 2547, 2658
MbiI CCGCTC 1 cut(s) 691
MfeI CAATTG 1 cut(s) 2471
MflI RGATCY 2 cut(s) 1049, 1582
MhlI GDGCHC 7 cut(s) 499, 609, 642, 1436, 1746, 1976, 2677
MlyI GAGTC 5 cut(s) 89, 208, 1357, 1433, 1565
MmeI TCCRAC 1 cut(s) 1749
Mph1103I ATGCAT 2 cut(s) 235, 1642
MroXI GAANNNNTTC 1 cut(s) 1926
MseI TTAA 8 cut(s) 354, 425, 1059, 1185, 2117, 2238, 2618, 2941
MslI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2763
MspA1I CMGCKG 3 cut(s) 310, 2632, 2837
MspR9I CCNGG 5 cut(s) 341, 972, 1085, 1752, 2255
MunI CAATTG 1 cut(s) 2471
Mva1269I GAATGC 2 cut(s) 235, 1360
MvaI CCWGG 5 cut(s) 341, 972, 1085, 1752, 2255
MvnI CGCG 1 cut(s) 2519
NdeI CATATG 4 cut(s) 235, 894, 1077, 1946
NlaIV GGNNCC 3 cut(s) 1306, 1342, 1733
NmeAIII GCCGAG 2 cut(s) 1046, 2851
NmuCI GTSAC 6 cut(s) 445, 587, 726, 1087, 1651, 2658
NsiI ATGCAT 2 cut(s) 235, 1642
NspI RCATGY 4 cut(s) 365, 514, 703, 1868
PaeI GCATGC 2 cut(s) 365, 514
PagI TCATGA 1 cut(s) 541
PceI AGGCCT 1 cut(s) 65
PctI GAATGC 2 cut(s) 235, 1360
PdmI GAANNNNTTC 1 cut(s) 1926
Pfl23II CGTACG 1 cut(s) 255
PflFI GACNNNGTC 1 cut(s) 2539
PleI GAGTC 5 cut(s) 88, 207, 1356, 1432, 1565
PpsI GAGTC 5 cut(s) 88, 207, 1356, 1432, 1565
Ppu21I YACGTR 1 cut(s) 947
Psp124BI GAGCTC 2 cut(s) 609, 642
Psp6I CCWGG 5 cut(s) 339, 970, 1083, 1750, 2253
PspGI CCWGG 5 cut(s) 339, 970, 1083, 1750, 2253
PspLI CGTACG 1 cut(s) 255
PspN4I GGNNCC 3 cut(s) 1306, 1342, 1733
PspPI GGNCC 4 cut(s) 4, 262, 346, 974
PsrI GAACNNNNNNTAC 2 cut(s) 2685, 2717
PstI CTGCAG 1 cut(s) 874
PstNI CAGNNNCTG 3 cut(s) 83, 1416, 2837
PsuI RGATCY 2 cut(s) 1049, 1582
PsyI GACNNNGTC 1 cut(s) 2539
PvuII CAGCTG 3 cut(s) 310, 2632, 2837
RsaI GTAC 4 cut(s) 257, 337, 841, 1113
RsaNI GTAC 4 cut(s) 256, 336, 840, 1112
RseI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2763
SacI GAGCTC 2 cut(s) 609, 642
SalI GTCGAC 1 cut(s) 2363
SaqAI TTAA 8 cut(s) 354, 425, 1059, 1185, 2117, 2238, 2618, 2941
Sau96I GGNCC 4 cut(s) 4, 262, 346, 974
SchI GAGTC 5 cut(s) 89, 208, 1357, 1433, 1565
ScrFI CCNGG 5 cut(s) 341, 972, 1085, 1752, 2255
SduI GDGCHC 7 cut(s) 499, 609, 642, 1436, 1746, 1976, 2677
SfcI CTRYAG 3 cut(s) 870, 1986, 2499
SinI GGWCC 3 cut(s) 4, 262, 974
SmiMI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2763
SmlI CTYRAG 4 cut(s) 1001, 1345, 2173, 2231
SmoI CTYRAG 4 cut(s) 1001, 1345, 2173, 2231
SphI GCATGC 2 cut(s) 365, 514
SseBI AGGCCT 1 cut(s) 65
SsiI CCGC 5 cut(s) 71, 691, 958, 1659, 2519
SspI AATATT 1 cut(s) 155
SspMI CTAG 6 cut(s) 923, 1068, 1227, 2024, 2411, 2775
SstI GAGCTC 2 cut(s) 609, 642
StuI AGGCCT 1 cut(s) 65
StyD4I CCNGG 5 cut(s) 339, 970, 1083, 1750, 2253
StyI CCWWGG 3 cut(s) 822, 1824, 2933
TaaI ACNGT 5 cut(s) 1152, 1249, 1741, 1906, 1913
TaiI ACGT 4 cut(s) 257, 949, 1207, 2543
TaqI TCGA 4 cut(s) 609, 1039, 1490, 2364
TaqII GACCGA 1 cut(s) 21
TatI WGTACW 1 cut(s) 1111
TauI GCSGC 1 cut(s) 1661
Tru1I TTAA 8 cut(s) 354, 425, 1059, 1185, 2117, 2238, 2618, 2941
Tru9I TTAA 8 cut(s) 354, 425, 1059, 1185, 2117, 2238, 2618, 2941
TseFI GTSAC 6 cut(s) 445, 587, 726, 1087, 1651, 2658
Tsp45I GTSAC 6 cut(s) 445, 587, 726, 1087, 1651, 2658
TspGWI ACGGA 2 cut(s) 25, 2858
Tth111I GACNNNGTC 1 cut(s) 2539
VpaK11BI GGWCC 3 cut(s) 4, 262, 974
XapI RAATTY 6 cut(s) 834, 1136, 1926, 2135, 2605, 2846
XceI RCATGY 4 cut(s) 365, 514, 703, 1868
XcmI CCANNNNNNNNNTGG 1 cut(s) 944
XmiI GTMKAC 1 cut(s) 2364
XmnI GAANNNNTTC 1 cut(s) 1926
XspI CTAG 6 cut(s) 923, 1068, 1227, 2024, 2411, 2775
Zsp2I ATGCAT 2 cut(s) 235, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.