Rroxscaffold_7G00165600

Filament-like plant protein

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000007
Physical Location & Seq
Reverse (-)
7274053 .. 7279604
5552 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_7G00165600.1

Sequence Viewer

Length: 3336 bp
ATGGACCGACGGAGTTGGCCGTGGAAGAAAAAATCATCATCAGACAAAGCTGCAACCGAGAAGGCCTTAGCGGTAGCAGAGTCTGTGCCGACGCCTCAGGCAGAGAAAGATAACTACAAGAAACCAAATTATGTTCAACTTTCGGTGGAGCAATATTCGCATCTCACTGGTTTGGAGGATCAAGTGAAGAATTATGAGAGTCAAGTGAAGAATTATGAGAATCAAGTGAATGCATATGAGGATCAAGTGAAGACGTACGAGGACCAATTTCAGACATTGGAGGATCAAATTACAGATTTGAATGAACAGCTCTCCACAGCCCACTCGGAGATCAGTACCCAGGAGGGCCTTGTTAAACAGCATGCTAAAGTTGCCGAAGAAGCTGTGTCAGGTTGGGAAAAGGCTGAAGCCGAAGCTCTTGCATTAAAAACTCATTTAGAATCTGTGACGCTTTTGAAGCTGACTGCTGAAGATCGGGCATCCCATTTAGATGGTGCTCTCAAAGAGTGCATGCGACAGATTAGAAATCTGAAGGAAGATCATGAACAGAAATTGCAAGAAGTTGTTTTCACCAAAACGAAGCAATGTGACAAAATCAAGCATGAGCTTGAAACAAGGATAGGTAATTTAGACCAAGAGCTCCTAAGGTCTGCTGCTGAAAATTCTGCTATTTCAAGGTCTTTACAAGAGCGGTCAAACATGCTATACAAGATAAACGAAGAAAAGTCACAAGCTGAGGCAGAAATTGAGCGTTTCAAGAGCAACATTGAATCTTGTGAAAGGGAAATAAACTCTCTGAAATATGAACTTCATATTGCTTCCAAGGAGCTGGAAATTCGTACAGAGGAAAAGAACATGAGTGTGAGGTCTGCAGATGCAGCCAACAAGCAGCATATGGAGGGTGTGAAAAAAATAACTAAGCTAGAAGCAGAGTGCCAAAGATTACGTGGTCTTGTGCGGAAGAAGTTGCCTGGTCCGGCTGCACTTGCCCAAATGAAGCTTGAGGTTGAGAGTTTAGGCCGAGATTATGGAGAAACTCGATTGAAGAGATCTCCTGTTAAGGCTTCTAGTCCACATATGTCCCAGGTGACTGAGTTTTCCCTCGACAATGTACAGAAGTTTCAGAAGGAGAATGAATTTCTGACAGAACGGTTATTAGCAATGGAAGAAGAAACAAAAATGCTTAAAGAAGCTTTGTCAAAACGTAACAGCGAATTGCAGGCTTCTAGGAGTATTTGTGCGAAGACAGTCAGCAAGCTTCAAGCATTAGAAGCACAGCTTCAAATCAGTGGTCAACAGAAAGGTTCCCCAACATCTGTTGTTCACGTCACCACTGAAGGTTCCTTGAGTCAGAATGCAAGCAATCCTCCAAGTTTCACCTCCATGTCTGAAGATGGAAATGATGATGACAGAAGCTGTGCTGAGTCTTGGGGCACGACATTGAACTCTGATGTCTCACACATCAAGAAGGAGAAGAACAATGAAAAGTCGAGCAAAGCTGAAAATCAAAATCATTTGAATCTTATGGATGACTTTCTGGAGATGGAGAAGTTGGCTTGCTTGCCTAATGACTCAAATGGAGATATCTCTGTTTCAGAAAGTCCAAACAATAAGACATCTGAAATAGAGACCCATGATGCATCAGGAGAAGTCACTGCCGCAAAAGATATACAATCTGAGCAGCAGCATGATTCAAGTCCACTGGCAAAGCATCAAGCATCTTCCAACGGGGACCTGACAGTGCTCAGTCCTGGAGCTAATGAAAACAAGCTGCCTCTGGTGAAGCTCCAATCAAGAATCTCGGTGCTGTTAGAGTTATTATCCAAGGACACTGATTTTGGTAAAGTTATTGAGGATATCAAGCATGTGGTTCAGGAAGCACAAGATACTCTGCACCCTCACACTGTAAACTGTGTTTCTGAAGAAATTCACAGCTCTGATGCCATATGTGATAGGCAGGCACACCCTGAGGGCTCTGTTCTAACTACGGAAAAGGAAATCACAGCCAAAGAGACCATGACTGCAATAACTGAAGAACTGGCATCTGCCATATCCTTGATCCATGACTTTGTGCTGCTCTTAGGAAAAAAAGTGGTGGGAGTGCATGACACATTTCCTGATGGCAATGAATTAAGTCAGAAGATTGAAGAATTTTCTGGCACATATAGTAAAGTTATTCATGGGAACTTGAGTTTGGTTGATTTGGTTCTTGACCTTTCTCATGTGTTGGCAAATGCCAGTGAGCTCAAGTTTAATGTTATAGGTTTCCAGGGTGTTGAAGCAGGAAGGAATAGTCCTGATTGTATTGACAAGGTAGCCTTACCAGAGAATAAAGTAGTTGAGAAGGATTCATCAGAAAGATATCAAAATCATTGTGTCGACATTTCTAATCATTCTAACCCTGAAGTTCCTGATGATGGAAATCTAGTCTCCAGCTTTGGGTCAAATGCCACCCCATGCAAAATCTCAGTGGAGGAGTTTGAGCAATTGAAATCAGAGAAAGATATCCTGTCTATAGATTTGGCAAGATGCGCGGAAAATCTGGAGATGACTACGTCCAAGTTACAGGAAACTGAGCAGCTTCTTGCAGAAGCTAAAACACAATTTGCTTCTGCTCAAAATTCAAACAGCTTAAATGAGACGCAGCTGAAATGTATGGCAGAATCATACAGGTCACTGGAATCACGAGCCCATGAGTTAGAAACTGAACTGAAGCTACTACAAGTCAGAACTGAAACTCTGGAAAAGGAGCTGCAAGAAGAAAAGAGGAATCATCAAGATGCTTTGGCTAGATGCACAGAACTTCAAGAAGAGTTGAAAAGGCAGGAGACCTTAGCAGCCGAGACAGCAGCTGAGACGGAATTCAAGACCAAACAGGACATGGAATTGGCGGATGCAGCAGAGAAGCTTGCCGAGTGTCAAGAAACCATATTTCTTCTCGGCAAGCAGTTGAAATCTTTGCATCCTCAACCAGAGACCATGGGATCTCCATACAGTGAGAGGAGTCAAAAAGTTGAAGGGTTCACTGAGGATGAACCCACCACTACCAAAGCCATGAATTTGCAAGACTTGGATCAAGCTGAGATTGAAGGTGCTGCTTCTTCCAATGTTCTTAGAGCGGGTGGCGAGTCACCCATCTATCTGTACAATGCCCCATGCAGCCCATCTGATACAGATGGGAACAATCTCTTGAAATCTCCTGGCAATGCCAAAACCTCAAAACACAGGCCCACAAAGTCCAGTTCCTCATCTGGCAGCTCTTCTAACCCAACACCGGAGAAACATCCACGCGGATTCAGCAGGTTTTTCTCCTCCAAAGGAAAGAATGGTTACTAG

Protein Analysis

1111

Amino Acids

123.62

Weight (kDa)

5.13

Isoelectric Point (pI)

50.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
CCDC39 PF24161 50 - 205 1.9e-07 Coiled-coil domain-containing protein 39
FPP PF05911 115 - 993 0.0 Filament-like plant protein, long coiled-coil
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 3291
AccBSI CCGCTC 2 cut(s) 691, 3119
AccI GTMKAC 1 cut(s) 2379
AccII CGCG 2 cut(s) 2534, 3291
AciI CCGC 8 cut(s) 71, 691, 958, 1659, 2534, 2891, 3119, 3291
AclWI GGATC 6 cut(s) 186, 249, 291, 2053, 2992, 3081
AcoI YGGCCR 1 cut(s) 17
AcsI RAATTY 8 cut(s) 661, 834, 1136, 1926, 2150, 2620, 2861, 3058
AcuI CTGAAG 9 cut(s) 426, 489, 551, 1356, 1410, 1941, 2052, 2424, 2732
AcyI GRCGYC 1 cut(s) 92
AfaI GTAC 5 cut(s) 257, 337, 841, 1113, 3146
AfiI CCNNNNNNNGG 3 cut(s) 2417, 2439, 3274
AjiI CACGTC 1 cut(s) 1327
AjnI CCWGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
AjuI GAANNNNNNNTTGG 2 cut(s) 2177, 2209
Alw21I GWGCWC 4 cut(s) 499, 642, 1746, 2247
Alw26I GTCTC 9 cut(s) 1459, 1622, 2006, 2434, 2633, 2822, 2837, 2849, 2969
AlwI GGATC 6 cut(s) 186, 249, 291, 2053, 2992, 3081
AlwNI CAGNNNCTG 3 cut(s) 83, 1416, 2852
AoxI GGCC 5 cut(s) 17, 63, 346, 1018, 3227
ApoI RAATTY 8 cut(s) 661, 834, 1136, 1926, 2150, 2620, 2861, 3058
ArsI GACNNNNNNTTYG 4 cut(s) 1276, 1308, 1820, 1852
Asp700I GAANNNNTTC 1 cut(s) 1926
AspLEI GCGC 1 cut(s) 2534
AspS9I GGNCC 6 cut(s) 4, 262, 346, 974, 1732, 3228
AsuHPI GGTGA 6 cut(s) 562, 1099, 1321, 1369, 1792, 3123
AvaII GGWCC 4 cut(s) 4, 262, 974, 1732
AxyI CCTNAGG 3 cut(s) 96, 644, 1968
BaeGI GKGCMC 1 cut(s) 1436
BanII GRGCYC 4 cut(s) 642, 1976, 2247, 2692
BauI CACGAG 1 cut(s) 2685
BbsI GAAGAC 2 cut(s) 257, 1250
Bbv12I GWGCWC 4 cut(s) 499, 642, 1746, 2247
BbvCI CCTCAGC 1 cut(s) 735
BccI CCATC 8 cut(s) 485, 1388, 1537, 2114, 2411, 3143, 3170, 3172
BceAI ACGGC 1 cut(s) 4
BcgI CGANNNNNNTGC 2 cut(s) 401, 435
BciT130I CCWGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
BcoDI GTCTC 9 cut(s) 1459, 1622, 2006, 2434, 2633, 2822, 2837, 2849, 2969
BfaI CTAG 6 cut(s) 923, 1068, 1227, 2426, 2790, 3334
BfmI CTRYAG 2 cut(s) 870, 2514
BfuAI ACCTGC 1 cut(s) 3291
BglII AGATCT 1 cut(s) 1049
Bme1390I CCNGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
Bme18I GGWCC 4 cut(s) 4, 262, 974, 1732
BmgBI CACGTC 1 cut(s) 1327
BmgT120I GGNCC 6 cut(s) 4, 262, 346, 974, 1732, 3228
BmiI GGNNCC 3 cut(s) 1306, 1342, 1733
BmrFI CCNGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
BpiI GAAGAC 2 cut(s) 257, 1250
BpmI CTGGAG 4 cut(s) 1559, 1773, 2416, 2564
Bpu10I CCTNAGC 3 cut(s) 67, 735, 2833
BpuEI CTTGAG 4 cut(s) 1022, 1366, 2209, 2231
BsaAI YACGTR 1 cut(s) 947
BsaBI GATNNNNATC 1 cut(s) 2421
BsaHI GRCGYC 1 cut(s) 92
BsaI GGTCTC 4 cut(s) 1622, 2006, 2822, 2969
BsaJI CCNNGG 7 cut(s) 20, 339, 822, 1083, 1824, 2269, 2979
BsaWI WCCGGW 1 cut(s) 3274
BsaXI ACNNNNNCTCC 2 cut(s) 1222, 1252
Bsc4I CCNNNNNNNGG 3 cut(s) 2417, 2439, 3274
Bse1I ACTGG 6 cut(s) 172, 1707, 2043, 2238, 2682, 3240
Bse21I CCTNAGG 3 cut(s) 96, 644, 1968
Bse3DI GCAATG 4 cut(s) 590, 1167, 2131, 3211
Bse8I GATNNNNATC 1 cut(s) 2421
BseBI CCWGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
BseDI CCNNGG 7 cut(s) 20, 339, 822, 1083, 1824, 2269, 2979
BseGI GGATG 6 cut(s) 479, 1534, 2899, 2962, 3037, 3283
BseJI GATNNNNATC 1 cut(s) 2421
BseLI CCNNNNNNNGG 3 cut(s) 2417, 2439, 3274
BseMI GCAATG 4 cut(s) 590, 1167, 2131, 3211
BseNI ACTGG 6 cut(s) 172, 1707, 2043, 2238, 2682, 3240
BseRI GAGGAG 3 cut(s) 2489, 3016, 3301
BseSI GKGCMC 1 cut(s) 1436
BsgI GTGCAG 2 cut(s) 966, 1877
Bsh1236I CGCG 2 cut(s) 2534, 3291
BshFI GGCC 5 cut(s) 19, 65, 348, 1020, 3229
BsiHKAI GWGCWC 4 cut(s) 499, 642, 1746, 2247
BsiSI CCGG 2 cut(s) 977, 3275
BsiWI CGTACG 1 cut(s) 255
BslFI GGGAC 2 cut(s) 1066, 1745
BslI CCNNNNNNNGG 3 cut(s) 2417, 2439, 3274
BsmAI GTCTC 9 cut(s) 1459, 1622, 2006, 2434, 2633, 2822, 2837, 2849, 2969
BsmBI CGTCTC 2 cut(s) 2633, 2849
BsmFI GGGAC 2 cut(s) 1066, 1745
BsmI GAATGC 2 cut(s) 235, 1360
BsnI GGCC 5 cut(s) 19, 65, 348, 1020, 3229
Bso31I GGTCTC 4 cut(s) 1622, 2006, 2822, 2969
Bsp1286I GDGCHC 7 cut(s) 499, 642, 1436, 1746, 1976, 2247, 2692
Bsp1407I TGTACA 2 cut(s) 1111, 3144
Bsp19I CCATGG 1 cut(s) 2979
BspACI CCGC 8 cut(s) 71, 691, 958, 1659, 2534, 2891, 3119, 3291
BspANI GGCC 5 cut(s) 19, 65, 348, 1020, 3229
BspFNI CGCG 2 cut(s) 2534, 3291
BspHI TCATGA 1 cut(s) 541
BspLI GGNNCC 3 cut(s) 1306, 1342, 1733
BspMAI CTGCAG 1 cut(s) 874
BspMI ACCTGC 1 cut(s) 3291
BspPI GGATC 6 cut(s) 186, 249, 291, 2053, 2992, 3081
BspQI GCTCTTC 1 cut(s) 3265
BspTNI GGTCTC 4 cut(s) 1622, 2006, 2822, 2969
BsrBI CCGCTC 2 cut(s) 691, 3119
BsrDI GCAATG 4 cut(s) 590, 1167, 2131, 3211
BsrGI TGTACA 2 cut(s) 1111, 3144
BsrI ACTGG 6 cut(s) 172, 1707, 2043, 2238, 2682, 3240
BssECI CCNNGG 7 cut(s) 20, 339, 822, 1083, 1824, 2269, 2979
BssNI GRCGYC 1 cut(s) 92
BssSI CACGAG 1 cut(s) 2685
BssT1I CCWWGG 3 cut(s) 822, 1824, 2979
Bst2BI CACGAG 1 cut(s) 2685
Bst2UI CCWGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
Bst4CI ACNGT 6 cut(s) 1152, 1249, 1741, 1906, 1913, 2996
Bst6I CTCTTC 3 cut(s) 1040, 2805, 3265
BstACI GRCGYC 1 cut(s) 92
BstAUI TGTACA 2 cut(s) 1111, 3144
BstBAI YACGTR 1 cut(s) 947
BstDSI CCRYGG 2 cut(s) 20, 2979
BstF5I GGATG 6 cut(s) 479, 1534, 2899, 2962, 3037, 3283
BstFNI CGCG 2 cut(s) 2534, 3291
BstHHI GCGC 1 cut(s) 2534
BstMAI GTCTC 9 cut(s) 1459, 1622, 2006, 2434, 2633, 2822, 2837, 2849, 2969
BstNI CCWGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
BstNSI RCATGY 4 cut(s) 365, 514, 703, 1868
BstSCI CCNGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
BstSFI CTRYAG 2 cut(s) 870, 2514
BstSLI GKGCMC 1 cut(s) 1436
BstUI CGCG 2 cut(s) 2534, 3291
BstV2I GAAGAC 2 cut(s) 257, 1250
BstX2I RGATCY 2 cut(s) 1049, 2984
BstXI CCANNNNNNTGG 2 cut(s) 491, 829
BstYI RGATCY 2 cut(s) 1049, 2984
Bsu36I CCTNAGG 3 cut(s) 96, 644, 1968
BsuRI GGCC 5 cut(s) 19, 65, 348, 1020, 3229
BtgI CCRYGG 2 cut(s) 20, 2979
BtrI CACGTC 1 cut(s) 1327
BtsCI GGATG 6 cut(s) 479, 1534, 2899, 2962, 3037, 3283
BtsI GCAGTG 1 cut(s) 1653
BveI ACCTGC 1 cut(s) 3291
CaiI CAGNNNCTG 3 cut(s) 83, 1416, 2852
CciI TCATGA 1 cut(s) 541
CfoI GCGC 1 cut(s) 2534
Cfr13I GGNCC 6 cut(s) 4, 262, 346, 974, 1732, 3228
CseI GACGC 3 cut(s) 100, 457, 2650
Csp6I GTAC 5 cut(s) 256, 336, 840, 1112, 3145
CviQI GTAC 5 cut(s) 256, 336, 840, 1112, 3145
EaeI YGGCCR 1 cut(s) 17
Eam1104I CTCTTC 3 cut(s) 1040, 2805, 3265
EarI CTCTTC 3 cut(s) 1040, 2805, 3265
EciI GGCGGA 1 cut(s) 2906
Ecl136II GAGCTC 2 cut(s) 640, 2245
Eco130I CCWWGG 3 cut(s) 822, 1824, 2979
Eco147I AGGCCT 1 cut(s) 65
Eco24I GRGCYC 4 cut(s) 642, 1976, 2247, 2692
Eco31I GGTCTC 4 cut(s) 1622, 2006, 2822, 2969
Eco32I GATATC 4 cut(s) 1585, 1858, 2363, 2506
Eco47I GGWCC 4 cut(s) 4, 262, 974, 1732
Eco53kI GAGCTC 2 cut(s) 640, 2245
Eco57I CTGAAG 9 cut(s) 426, 489, 551, 1356, 1410, 1941, 2052, 2424, 2732
Eco81I CCTNAGG 3 cut(s) 96, 644, 1968
EcoICRI GAGCTC 2 cut(s) 640, 2245
EcoO109I RGGNCCY 2 cut(s) 346, 1732
EcoRI GAATTC 1 cut(s) 2861
EcoRII CCWGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
EcoRV GATATC 4 cut(s) 1585, 1858, 2363, 2506
EcoT14I CCWWGG 3 cut(s) 822, 1824, 2979
EcoT22I ATGCAT 2 cut(s) 235, 1642
EcoT38I GRGCYC 4 cut(s) 642, 1976, 2247, 2692
ErhI CCWWGG 3 cut(s) 822, 1824, 2979
Esp3I CGTCTC 2 cut(s) 2633, 2849
FalI AAGNNNNNCTT 4 cut(s) 1263, 1295, 2303, 2335
FaqI GGGAC 2 cut(s) 1066, 1745
FauI CCCGC 1 cut(s) 3112
FauNDI CATATG 4 cut(s) 235, 894, 1077, 1946
FblI GTMKAC 1 cut(s) 2379
FokI GGATG 6 cut(s) 466, 1541, 2906, 2949, 3044, 3270
FriOI GRGCYC 4 cut(s) 642, 1976, 2247, 2692
FspBI CTAG 6 cut(s) 923, 1068, 1227, 2426, 2790, 3334
GlaI GCGC 1 cut(s) 2533
GsuI CTGGAG 4 cut(s) 1559, 1773, 2416, 2564
HaeIII GGCC 5 cut(s) 19, 65, 348, 1020, 3229
HapII CCGG 2 cut(s) 977, 3275
HgaI GACGC 3 cut(s) 100, 457, 2650
HhaI GCGC 1 cut(s) 2534
Hin1I GRCGYC 1 cut(s) 92
Hin6I GCGC 1 cut(s) 2532
HinP1I GCGC 1 cut(s) 2532
HincII GTYRAC 2 cut(s) 1295, 2380
HindII GTYRAC 2 cut(s) 1295, 2380
HindIII AAGCTT 4 cut(s) 998, 1191, 1256, 2906
HpaII CCGG 2 cut(s) 977, 3275
HphI GGTGA 6 cut(s) 562, 1099, 1321, 1369, 1792, 3123
Hpy166II GTNNAC 7 cut(s) 1073, 1295, 1324, 1700, 1909, 2380, 3024
Hpy8I GTNNAC 7 cut(s) 1073, 1295, 1324, 1700, 1909, 2380, 3024
Hpy99I CGWCG 2 cut(s) 12, 94
HpyAV CCTTC 9 cut(s) 55, 526, 1120, 1331, 1462, 2280, 2338, 3011, 3083
HpyCH4III ACNGT 6 cut(s) 1152, 1249, 1741, 1906, 1913, 2996
HpyCH4IV ACGT 5 cut(s) 254, 946, 1204, 1326, 2555
HpySE526I ACGT 5 cut(s) 254, 946, 1204, 1326, 2555
Hsp92I GRCGYC 1 cut(s) 92
HspAI GCGC 1 cut(s) 2532
LguI GCTCTTC 1 cut(s) 3265
LmnI GCTCC 6 cut(s) 148, 645, 826, 1754, 1791, 2749
MaeI CTAG 6 cut(s) 923, 1068, 1227, 2426, 2790, 3334
MaeII ACGT 5 cut(s) 254, 946, 1204, 1326, 2555
MbiI CCGCTC 2 cut(s) 691, 3119
MfeI CAATTG 1 cut(s) 2486
MflI RGATCY 2 cut(s) 1049, 2984
MhlI GDGCHC 7 cut(s) 499, 642, 1436, 1746, 1976, 2247, 2692
MlyI GAGTC 7 cut(s) 89, 208, 1357, 1433, 1565, 3013, 3137
MmeI TCCRAC 1 cut(s) 1749
Mph1103I ATGCAT 2 cut(s) 235, 1642
MroXI GAANNNNTTC 1 cut(s) 1926
MseI TTAA 7 cut(s) 354, 425, 1059, 1185, 2132, 2253, 2633
MslI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2778
MspA1I CMGCKG 2 cut(s) 2647, 2852
MspI CCGG 2 cut(s) 977, 3275
MspR9I CCNGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
MunI CAATTG 1 cut(s) 2486
Mva1269I GAATGC 2 cut(s) 235, 1360
MvaI CCWGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
MvnI CGCG 2 cut(s) 2534, 3291
NcoI CCATGG 1 cut(s) 2979
NdeI CATATG 4 cut(s) 235, 894, 1077, 1946
NlaIV GGNNCC 3 cut(s) 1306, 1342, 1733
NmeAIII GCCGAG 4 cut(s) 1046, 2866, 2919, 2938
NmuCI GTSAC 8 cut(s) 445, 587, 726, 1087, 1327, 1651, 2673, 3129
NsiI ATGCAT 2 cut(s) 235, 1642
NspI RCATGY 4 cut(s) 365, 514, 703, 1868
PaeI GCATGC 2 cut(s) 365, 514
PagI TCATGA 1 cut(s) 541
PceI AGGCCT 1 cut(s) 65
PciSI GCTCTTC 1 cut(s) 3265
PctI GAATGC 2 cut(s) 235, 1360
PdmI GAANNNNTTC 1 cut(s) 1926
Pfl23II CGTACG 1 cut(s) 255
PflFI GACNNNGTC 1 cut(s) 2554
PfoI TCCNGGA 1 cut(s) 1750
PleI GAGTC 7 cut(s) 88, 207, 1356, 1432, 1565, 3012, 3136
PpsI GAGTC 7 cut(s) 88, 207, 1356, 1432, 1565, 3012, 3136
Ppu21I YACGTR 1 cut(s) 947
PpuMI RGGWCCY 1 cut(s) 1732
Psp124BI GAGCTC 2 cut(s) 642, 2247
Psp5II RGGWCCY 1 cut(s) 1732
Psp6I CCWGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
PspGI CCWGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
PspLI CGTACG 1 cut(s) 255
PspN4I GGNNCC 3 cut(s) 1306, 1342, 1733
PspPI GGNCC 6 cut(s) 4, 262, 346, 974, 1732, 3228
PspPPI RGGWCCY 1 cut(s) 1732
PsrI GAACNNNNNNTAC 2 cut(s) 2700, 2732
PstI CTGCAG 1 cut(s) 874
PstNI CAGNNNCTG 3 cut(s) 83, 1416, 2852
PsuI RGATCY 2 cut(s) 1049, 2984
PsyI GACNNNGTC 1 cut(s) 2554
PvuII CAGCTG 2 cut(s) 2647, 2852
RsaI GTAC 5 cut(s) 257, 337, 841, 1113, 3146
RsaNI GTAC 5 cut(s) 256, 336, 840, 1112, 3145
RseI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2778
SacI GAGCTC 2 cut(s) 642, 2247
SalI GTCGAC 1 cut(s) 2378
SapI GCTCTTC 1 cut(s) 3265
SaqAI TTAA 7 cut(s) 354, 425, 1059, 1185, 2132, 2253, 2633
Sau96I GGNCC 6 cut(s) 4, 262, 346, 974, 1732, 3228
SchI GAGTC 7 cut(s) 89, 208, 1357, 1433, 1565, 3013, 3137
ScrFI CCNGG 6 cut(s) 341, 972, 1085, 1752, 2270, 3201
SduI GDGCHC 7 cut(s) 499, 642, 1436, 1746, 1976, 2247, 2692
SfcI CTRYAG 2 cut(s) 870, 2514
SinI GGWCC 4 cut(s) 4, 262, 974, 1732
SmiMI CAYNNNNRTG 4 cut(s) 489, 860, 1382, 2778
SmlI CTYRAG 4 cut(s) 1001, 1345, 2188, 2246
SmoI CTYRAG 4 cut(s) 1001, 1345, 2188, 2246
SphI GCATGC 2 cut(s) 365, 514
SseBI AGGCCT 1 cut(s) 65
SsiI CCGC 8 cut(s) 71, 691, 958, 1659, 2534, 2891, 3119, 3291
SspI AATATT 1 cut(s) 155
SspMI CTAG 6 cut(s) 923, 1068, 1227, 2426, 2790, 3334
SstI GAGCTC 2 cut(s) 642, 2247
StuI AGGCCT 1 cut(s) 65
StyD4I CCNGG 6 cut(s) 339, 970, 1083, 1750, 2268, 3199
StyI CCWWGG 3 cut(s) 822, 1824, 2979
TaaI ACNGT 6 cut(s) 1152, 1249, 1741, 1906, 1913, 2996
TaiI ACGT 5 cut(s) 257, 949, 1207, 1329, 2558
TaqI TCGA 4 cut(s) 1039, 1104, 1490, 2379
TaqII GACCGA 1 cut(s) 21
TatI WGTACW 2 cut(s) 1111, 3144
TauI GCSGC 1 cut(s) 1661
Tru1I TTAA 7 cut(s) 354, 425, 1059, 1185, 2132, 2253, 2633
Tru9I TTAA 7 cut(s) 354, 425, 1059, 1185, 2132, 2253, 2633
TseFI GTSAC 8 cut(s) 445, 587, 726, 1087, 1327, 1651, 2673, 3129
Tsp45I GTSAC 8 cut(s) 445, 587, 726, 1087, 1327, 1651, 2673, 3129
TspGWI ACGGA 3 cut(s) 25, 2003, 2873
Tth111I GACNNNGTC 1 cut(s) 2554
VpaK11BI GGWCC 4 cut(s) 4, 262, 974, 1732
XapI RAATTY 8 cut(s) 661, 834, 1136, 1926, 2150, 2620, 2861, 3058
XceI RCATGY 4 cut(s) 365, 514, 703, 1868
XcmI CCANNNNNNNNNTGG 2 cut(s) 944, 2878
XmiI GTMKAC 1 cut(s) 2379
XmnI GAANNNNTTC 1 cut(s) 1926
XspI CTAG 6 cut(s) 923, 1068, 1227, 2426, 2790, 3334
Zsp2I ATGCAT 2 cut(s) 235, 1642
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.