pycom08g12790

PhoX homologous domain, present in p47phox and p40phox.

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
Physical Location & Seq
Reverse (-)
11354324 .. 11359718
5395 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom08g12790.2

Sequence Viewer

Length: 2004 bp
ATGCAGAGACGGAGTCCGCCGAAGCACAGGCACGATGGGACTTCGCCGCTGCCGCTTGGGATGGATTGGAGTCCTCCTCCTCGAAAATGGAATGGACAGGACACAGTCTGGCCACATGATCCTCGCACAGGATGGAGTTATTGTGTCGCTATACCTTCGTGGGTTGCACTTCCAAAATCAAGAAATTCCGATCCCGTAGTGTTCTACAGGGTTCAGGTTGGTGTACAATCACCGGAAGGTATTACAACTACAAGTGGGGTGTTAAGAAGATTTAATGATTTTCTGAAGTTATTTAGTGATCTTAAAAGGGCATTTCCCAAGAAAAATCTCCCACCAACTCCATCCAAGGGACTTCTGCGAATGAAGAGCCGGGAACTGTTGGAAGAGAGAAGGTGTTCGTTGGAGGCTTGGGTGACAAAGCTGCTATCGGATATTGATATATCAAGAAGCATTGCAGTGGCATCCTTTCTTGAACTAGAGTCTGCAGCTAGATCTTGGAGTTCATCAATCACATCAGATTATGGAAGTGATACTGCTTATGAGACTTCTGAGCTAGGAACCCCAAGGCTAGGAAGGGATGACGGTTCTGAAATTGGTATCGAAGATCTGGTATTGGATGAAGATTTAACAAGCCCAATAGAAAAGCTTGTGAAGTATGGCATGACCAATATTGATGAGGGACTTTTTATGGGACAAACTATACTAGAGCAGTTGGAAGGCCTTCCTAAGCATAAAGTAAATGCGGGACATGTCAATAATGTTGTAGGGAAAAATACATATAACGGAAATGCTTCTAAATCTTCAATTCTAGCTTGTAATGGAATGGAACTTTTCTCCGAGCCAGAGCGTAGTAAAGTATTCAACCATGCTCGCAAGCTCTCAAATGAAAGTGTGGGAAGTGATGCCAGTTCTCTAAGAGGTAGTGAAATGTCCAACTCTGGTGTTCCTAACTCATCTGGTGATGGTTCTCTTGACCTTCTCGGAGGTATTGAGGTTTCAAGTATTATGGAAATGCTTGGCAACACAGAGTTACAACCTTCAGGTGGCACTCAACTAGTTCTCCCATTAGATCAGCGAAACAAATTAAACAGGGTTCTCTTGACTATGCAGCGAAGACTAGTCACAGCAAAAACAGATATGGAAGATCTTATATCTAGACTAAATCAAGAAATAGCAGTGAAAGATTACCTTGCAACAAAGGTCAAGGATTTGGAAGTTGAACTTGAAACTACGAGACAAAAAAGTAAAGAGAACCTGCAGCAAGCTATTTTAATTGAGAGGGAAAGGTTTACTAAAATGCAGTGGGATATGGAGGAACTGCGGCGGAAGTCATTGGAAATGGAGTTGAAGTTGAAGTCGGAACAGGATAAGAAGTCGTGTGCAGAGTCAACAAAAGATTCATCTGATCAAGAGAAAGAGATATTGCCGCAGGAGTTGGATCCGTACAAGGAGCAGCTTGAGAATTTGTCAAAGCGATATGAAGAGCTAGAAGCAAAATCTAAAGCAGATATAAAAGTTCTTGTTAAAGAAGTTAAATCCTTGCGCAGTTCTCAAGCAGGACTGAAACATGAACTTAATAAATCGCTGACGGAGAAATCTGAAGCTGAGAAGCTCCACCAACAGGAAAAACAAATGAGTAAGCTTGCAGAAAGTGCTAGAAAAAAATGGTTGCAAGAATGCAAAGTTCTTCATAAGCAGCTTCAAGAATGCAATTTCAATTTTCCTGTTGATGATTCTTCAATTCTACCAGAGTCTTCAGATTTGTTGGCTACTTCAGACAACCGTATTAGCCTCTTACTTTCAGAGTCACAACTCTTAGCTGAAGACAATGGAGCTACTGGTGAAGTTGACAACCTCGATGATGATACGAGGACAATAGACATTGAGTTGAGGAAGTTTCTGGCAGAATTTTTTTCTGAAAATGCTAGATTACGGAAGCAGGTGAACTCTCATATGTCGTGCTCGCAAAATGGATATCCAATCTACGAAAGACGAGGTCCCTGA

Protein Analysis

668

Amino Acids

75.19

Weight (kDa)

5.68

Isoelectric Point (pI)

56.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1930
Acc16I TGCGCA 1 cut(s) 1544
Acc36I ACCTGC 2 cut(s) 1263, 1930
AciI CCGC 7 cut(s) 17, 47, 53, 743, 1321, 1324, 1427
AclWI GGATC 4 cut(s) 113, 185, 1433, 1446
AcoI YGGCCR 1 cut(s) 110
AcsI RAATTY 3 cut(s) 184, 1462, 1907
AcuI CTGAAG 6 cut(s) 305, 1023, 1620, 1740, 1758, 1842
AfaI GTAC 2 cut(s) 225, 1445
AfiI CCNNNNNNNGG 5 cut(s) 128, 347, 569, 1043, 1621
AflIII ACRYGT 1 cut(s) 748
AhlI ACTAGT 2 cut(s) 1054, 1117
Alw21I GWGCWC 1 cut(s) 1964
Alw26I GTCTC 2 cut(s) 536, 1228
AlwI GGATC 4 cut(s) 113, 185, 1433, 1446
AoxI GGCC 2 cut(s) 110, 718
ApeKI GCWGC 7 cut(s) 49, 421, 485, 1108, 1258, 1453, 1696
ApoI RAATTY 3 cut(s) 184, 1462, 1907
Asp700I GAANNNNTTC 3 cut(s) 394, 720, 790
AspLEI GCGC 1 cut(s) 1545
AspS9I GGNCC 1 cut(s) 1997
AsuC2I CCSGG 1 cut(s) 371
AsuHPI GGTGA 5 cut(s) 222, 424, 971, 1853, 1954
AvaII GGWCC 1 cut(s) 1997
BalI TGGCCA 1 cut(s) 112
BamHI GGATCC 1 cut(s) 1438
BbsI GAAGAC 3 cut(s) 1120, 1746, 1830
Bbv12I GWGCWC 1 cut(s) 1964
BbvI GCAGC 7 cut(s) 36, 408, 497, 1120, 1270, 1465, 1708
BccI CCATC 5 cut(s) 29, 55, 126, 349, 956
BclI TGATCA 1 cut(s) 1405
BcnI CCSGG 1 cut(s) 371
BcoDI GTCTC 2 cut(s) 536, 1228
BcuI ACTAGT 2 cut(s) 1054, 1117
BfmI CTRYAG 3 cut(s) 205, 483, 1256
BfuAI ACCTGC 2 cut(s) 1263, 1930
BglII AGATCT 3 cut(s) 491, 604, 1144
Bme1390I CCNGG 1 cut(s) 371
Bme18I GGWCC 1 cut(s) 1997
BmgT120I GGNCC 1 cut(s) 1997
BmiI GGNNCC 3 cut(s) 559, 1440, 1999
BmrFI CCNGG 1 cut(s) 371
BmsI GCATC 2 cut(s) 470, 892
BpiI GAAGAC 3 cut(s) 1120, 1746, 1830
BplI GAGNNNNNCTC 2 cut(s) 61, 93
Bpu10I CCTNAGC 1 cut(s) 726
BpuEI CTTGAG 2 cut(s) 1478, 1536
BpuMI CCSGG 1 cut(s) 371
BsaJI CCNNGG 2 cut(s) 345, 563
BsaWI WCCGGW 1 cut(s) 232
BsaXI ACNNNNNCTCC 6 cut(s) 127, 157, 1044, 1074, 1334, 1364
Bsc4I CCNNNNNNNGG 5 cut(s) 128, 347, 569, 1043, 1621
Bse1I ACTGG 2 cut(s) 906, 1843
Bse3DI GCAATG 1 cut(s) 450
BseDI CCNNGG 2 cut(s) 345, 563
BseGI GGATG 6 cut(s) 66, 137, 341, 461, 583, 622
BseLI CCNNNNNNNGG 5 cut(s) 128, 347, 569, 1043, 1621
BseMI GCAATG 1 cut(s) 450
BseMII CTCAG 2 cut(s) 540, 1596
BseNI ACTGG 2 cut(s) 906, 1843
BseRI GAGGAG 2 cut(s) 66, 69
BseXI GCAGC 7 cut(s) 36, 408, 497, 1120, 1270, 1465, 1708
BsgI GTGCAG 1 cut(s) 1401
BshFI GGCC 2 cut(s) 112, 720
BsiHKAI GWGCWC 1 cut(s) 1964
BsiSI CCGG 2 cut(s) 233, 370
BslFI GGGAC 6 cut(s) 52, 363, 693, 705, 759, 1983
BslI CCNNNNNNNGG 5 cut(s) 128, 347, 569, 1043, 1621
BsmAI GTCTC 2 cut(s) 536, 1228
BsmFI GGGAC 6 cut(s) 52, 363, 693, 705, 759, 1983
BsmI GAATGC 2 cut(s) 1682, 1712
BsnI GGCC 2 cut(s) 112, 720
Bsp1286I GDGCHC 1 cut(s) 1964
Bsp1407I TGTACA 1 cut(s) 223
Bsp143I GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
BspACI CCGC 7 cut(s) 17, 47, 53, 743, 1321, 1324, 1427
BspANI GGCC 2 cut(s) 112, 720
BspCNI CTCAG 2 cut(s) 541, 1597
BspLI GGNNCC 3 cut(s) 559, 1440, 1999
BspMAI CTGCAG 2 cut(s) 487, 1260
BspMI ACCTGC 2 cut(s) 1263, 1930
BspPI GGATC 4 cut(s) 113, 185, 1433, 1446
BspQI GCTCTTC 2 cut(s) 359, 1476
BsrDI GCAATG 1 cut(s) 450
BsrGI TGTACA 1 cut(s) 223
BsrI ACTGG 2 cut(s) 906, 1843
BssECI CCNNGG 2 cut(s) 345, 563
BssMI GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
BssT1I CCWWGG 2 cut(s) 345, 563
Bst4CI ACNGT 4 cut(s) 106, 378, 584, 1784
Bst6I CTCTTC 3 cut(s) 359, 378, 1476
BstAPI GCANNNNNTGC 1 cut(s) 1652
BstAUI TGTACA 1 cut(s) 223
BstC8I GCNNGC 5 cut(s) 871, 875, 1263, 1644, 1964
BstDEI CTNAG 5 cut(s) 549, 726, 914, 1605, 1816
BstENI CCTNNNNNAGG 1 cut(s) 126
BstF5I GGATG 6 cut(s) 66, 137, 341, 461, 583, 622
BstHHI GCGC 1 cut(s) 1545
BstKTI GATC 9 cut(s) 121, 193, 301, 494, 607, 1072, 1147, 1408, 1441
BstMAI GTCTC 2 cut(s) 536, 1228
BstMBI GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
BstMWI GCNNNNNNNGC 2 cut(s) 52, 1652
BstNSI RCATGY 1 cut(s) 752
BstSCI CCNGG 1 cut(s) 369
BstSFI CTRYAG 3 cut(s) 205, 483, 1256
BstV1I GCAGC 7 cut(s) 36, 408, 497, 1120, 1270, 1465, 1708
BstV2I GAAGAC 3 cut(s) 1120, 1746, 1830
BstX2I RGATCY 4 cut(s) 491, 604, 1144, 1438
BstYI RGATCY 4 cut(s) 491, 604, 1144, 1438
BsuRI GGCC 2 cut(s) 112, 720
BtsCI GGATG 6 cut(s) 66, 137, 341, 461, 583, 622
BtsI GCAGTG 3 cut(s) 462, 1182, 1307
BtsIMutI CAGTG 3 cut(s) 462, 1182, 1307
BveI ACCTGC 2 cut(s) 1263, 1930
Cac8I GCNNGC 5 cut(s) 871, 875, 1263, 1644, 1964
CfoI GCGC 1 cut(s) 1545
Cfr13I GGNCC 1 cut(s) 1997
Csp6I GTAC 2 cut(s) 224, 1444
CviAII CATG 5 cut(s) 116, 661, 749, 866, 1568
CviQI GTAC 2 cut(s) 224, 1444
DdeI CTNAG 5 cut(s) 549, 726, 914, 1605, 1816
DpnI GATC 9 cut(s) 120, 192, 300, 493, 606, 1071, 1146, 1407, 1440
DpnII GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
EaeI YGGCCR 1 cut(s) 110
Eam1104I CTCTTC 3 cut(s) 359, 378, 1476
EarI CTCTTC 3 cut(s) 359, 378, 1476
EciI GGCGGA 2 cut(s) 6, 1339
Eco130I CCWWGG 2 cut(s) 345, 563
Eco147I AGGCCT 1 cut(s) 720
Eco32I GATATC 1 cut(s) 1976
Eco47I GGWCC 1 cut(s) 1997
Eco57I CTGAAG 6 cut(s) 305, 1023, 1620, 1740, 1758, 1842
EcoNI CCTNNNNNAGG 1 cut(s) 126
EcoO109I RGGNCCY 1 cut(s) 1997
EcoRV GATATC 1 cut(s) 1976
EcoT14I CCWWGG 2 cut(s) 345, 563
ErhI CCWWGG 2 cut(s) 345, 563
FaeI CATG 5 cut(s) 119, 664, 752, 869, 1571
FalI AAGNNNNNCTT 4 cut(s) 1173, 1205, 1206, 1238
FaqI GGGAC 6 cut(s) 52, 363, 693, 705, 759, 1983
FatI CATG 5 cut(s) 115, 660, 748, 865, 1567
FauI CCCGC 1 cut(s) 736
FauNDI CATATG 1 cut(s) 1953
FbaI TGATCA 1 cut(s) 1405
FokI GGATG 6 cut(s) 73, 144, 328, 448, 590, 629
FspI TGCGCA 1 cut(s) 1544
GlaI GCGC 1 cut(s) 1544
HaeIII GGCC 2 cut(s) 112, 720
HapII CCGG 2 cut(s) 233, 370
HhaI GCGC 1 cut(s) 1545
Hin1II CATG 5 cut(s) 119, 664, 752, 869, 1571
Hin6I GCGC 1 cut(s) 1543
HinP1I GCGC 1 cut(s) 1543
HincII GTYRAC 2 cut(s) 1389, 1849
HindII GTYRAC 2 cut(s) 1389, 1849
HindIII AAGCTT 2 cut(s) 644, 1640
HinfI GANTC 8 cut(s) 13, 70, 479, 1385, 1397, 1733, 1751, 1805
HpaII CCGG 2 cut(s) 233, 370
HphI GGTGA 5 cut(s) 222, 424, 971, 1853, 1954
Hpy166II GTNNAC 5 cut(s) 224, 1290, 1389, 1849, 1945
Hpy188III TCNNGA 9 cut(s) 180, 444, 470, 971, 1099, 1155, 1166, 1409, 1703
Hpy8I GTNNAC 5 cut(s) 224, 1290, 1389, 1849, 1945
HpyAV CCTTC 8 cut(s) 165, 230, 384, 567, 710, 731, 986, 1047
HpyCH4III ACNGT 4 cut(s) 106, 378, 584, 1784
HpyF10VI GCNNNNNNNGC 2 cut(s) 52, 1652
HpyF3I CTNAG 5 cut(s) 549, 726, 914, 1605, 1816
Hsp92II CATG 5 cut(s) 119, 664, 752, 869, 1571
HspAI GCGC 1 cut(s) 1543
Ksp22I TGATCA 1 cut(s) 1405
Kzo9I GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
LguI GCTCTTC 2 cut(s) 359, 1476
LmnI GCTCC 3 cut(s) 1450, 1617, 1832
Lsp1109I GCAGC 7 cut(s) 36, 408, 497, 1120, 1270, 1465, 1708
LweI GCATC 2 cut(s) 470, 892
MaeIII GTNAC 4 cut(s) 412, 1029, 1120, 1806
MalI GATC 9 cut(s) 120, 192, 300, 493, 606, 1071, 1146, 1407, 1440
MboI GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
MflI RGATCY 4 cut(s) 491, 604, 1144, 1438
MhlI GDGCHC 1 cut(s) 1964
MlsI TGGCCA 1 cut(s) 112
MluNI TGGCCA 1 cut(s) 112
MlyI GAGTC 6 cut(s) 22, 79, 488, 1394, 1760, 1814
MmeI TCCRAC 6 cut(s) 360, 381, 693, 957, 1338, 1416
Mox20I TGGCCA 1 cut(s) 112
MroXI GAANNNNTTC 3 cut(s) 394, 720, 790
MscI TGGCCA 1 cut(s) 112
MseI TTAA 9 cut(s) 263, 273, 303, 626, 1085, 1271, 1524, 1533, 1575
MslI CAYNNNNRTG 1 cut(s) 455
Msp20I TGGCCA 1 cut(s) 112
MspA1I CMGCKG 1 cut(s) 49
MspI CCGG 2 cut(s) 233, 370
MspR9I CCNGG 1 cut(s) 371
Mva1269I GAATGC 2 cut(s) 1682, 1712
MwoI GCNNNNNNNGC 2 cut(s) 52, 1652
NciI CCSGG 1 cut(s) 371
NdeI CATATG 1 cut(s) 1953
NdeII GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
NlaIII CATG 5 cut(s) 119, 664, 752, 869, 1571
NlaIV GGNNCC 3 cut(s) 559, 1440, 1999
NmuCI GTSAC 3 cut(s) 412, 1120, 1806
NsbI TGCGCA 1 cut(s) 1544
NspI RCATGY 1 cut(s) 752
PaqCI CACCTGC 1 cut(s) 1930
PceI AGGCCT 1 cut(s) 720
PciI ACATGT 1 cut(s) 748
PciSI GCTCTTC 2 cut(s) 359, 1476
PctI GAATGC 2 cut(s) 1682, 1712
PdmI GAANNNNTTC 3 cut(s) 394, 720, 790
PfeI GAWTC 2 cut(s) 1397, 1733
PflFI GACNNNGTC 3 cut(s) 12, 104, 1995
PleI GAGTC 6 cut(s) 21, 78, 487, 1393, 1759, 1813
PpsI GAGTC 6 cut(s) 21, 78, 487, 1393, 1759, 1813
PpuMI RGGWCCY 1 cut(s) 1997
PscI ACATGT 1 cut(s) 748
Psp5II RGGWCCY 1 cut(s) 1997
PspN4I GGNNCC 3 cut(s) 559, 1440, 1999
PspPI GGNCC 1 cut(s) 1997
PspPPI RGGWCCY 1 cut(s) 1997
PstI CTGCAG 2 cut(s) 487, 1260
PsuI RGATCY 4 cut(s) 491, 604, 1144, 1438
PsyI GACNNNGTC 3 cut(s) 12, 104, 1995
RsaI GTAC 2 cut(s) 225, 1445
RsaNI GTAC 2 cut(s) 224, 1444
RseI CAYNNNNRTG 1 cut(s) 455
SapI GCTCTTC 2 cut(s) 359, 1476
SaqAI TTAA 9 cut(s) 263, 273, 303, 626, 1085, 1271, 1524, 1533, 1575
Sau3AI GATC 9 cut(s) 118, 190, 298, 491, 604, 1069, 1144, 1405, 1438
Sau96I GGNCC 1 cut(s) 1997
SchI GAGTC 6 cut(s) 22, 79, 488, 1394, 1760, 1814
ScrFI CCNGG 1 cut(s) 371
SduI GDGCHC 1 cut(s) 1964
SfaNI GCATC 2 cut(s) 470, 892
SfcI CTRYAG 3 cut(s) 205, 483, 1256
SinI GGWCC 1 cut(s) 1997
SmiMI CAYNNNNRTG 1 cut(s) 455
SmlI CTYRAG 2 cut(s) 1457, 1551
SmoI CTYRAG 2 cut(s) 1457, 1551
SpeI ACTAGT 2 cut(s) 1054, 1117
SseBI AGGCCT 1 cut(s) 720
SsiI CCGC 7 cut(s) 17, 47, 53, 743, 1321, 1324, 1427
SspI AATATT 1 cut(s) 670
StuI AGGCCT 1 cut(s) 720
StyD4I CCNGG 1 cut(s) 369
StyI CCWWGG 2 cut(s) 345, 563
TaaI ACNGT 4 cut(s) 106, 378, 584, 1784
TaqI TCGA 3 cut(s) 82, 600, 1857
TatI WGTACW 1 cut(s) 223
TauI GCSGC 4 cut(s) 49, 55, 1324, 1429
TfiI GAWTC 2 cut(s) 1397, 1733
Tru1I TTAA 9 cut(s) 263, 273, 303, 626, 1085, 1271, 1524, 1533, 1575
Tru9I TTAA 9 cut(s) 263, 273, 303, 626, 1085, 1271, 1524, 1533, 1575
TscAI CASTG 3 cut(s) 462, 1182, 1307
TseFI GTSAC 3 cut(s) 412, 1120, 1806
TseI GCWGC 7 cut(s) 49, 421, 485, 1108, 1258, 1453, 1696
Tsp45I GTSAC 3 cut(s) 412, 1120, 1806
TspDTI ATGAA 8 cut(s) 377, 492, 633, 900, 1389, 1494, 1584, 1679
TspGWI ACGGA 5 cut(s) 25, 798, 1431, 1604, 1948
TspRI CASTG 3 cut(s) 462, 1182, 1307
Tth111I GACNNNGTC 3 cut(s) 12, 104, 1995
VpaK11BI GGWCC 1 cut(s) 1997
XagI CCTNNNNNAGG 1 cut(s) 126
XapI RAATTY 3 cut(s) 184, 1462, 1907
XbaI TCTAGA 1 cut(s) 1154
XceI RCATGY 1 cut(s) 752
XmnI GAANNNNTTC 3 cut(s) 394, 720, 790
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.