Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0010157

Physical Location & Seq

Genomic Coordinates Reverse (-)

12869974 .. 12875748

Gene Structure 5775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g13900.5

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1494 bp

ATGAATTTTGATCAAATAAAAATAAAATTATTTTCCATAAATTCAGTGTTCATAATCTCCGTCTTCCTCTTCGGTTCGTTAATTTCACCCGCGGAACCGACGTCGTCCGGCGATCACAGCCACCCGTTCGTCGAGCTCGATAACTGTTGCCCCAGATGCAAGCCAAGCCCCGAAGCTCGAAAGAATCTGAGCCTCCACGGGCTAACATCTCCGCCGTCACCCTCGACGTCGTCTCCGTCTCCTCGGCCGAGCTGCGAGGTTTGGACGGAGGCGTGCTCGGAAGCTGTTTTGAGCTTCGCGAAGCGGCCGGAGAATATGGAGTGGCTGAAGACGGTGAGGCGGAGGATCCACGAGCATCCGGAGCTCGCTTTCGAGGAGTTCGAGACGAGCCGGTTGGTTCGGGATGAGTTGGACCGGTTGGACATCGGTTACCGGTTTCCTTTGGCGAAGACCGGAATCCGAGCTTGGATCGGAACCGGCGGTCCTCCGTTTGTCGCCGTCAGAGCTGACATGGACGCTCTTCCAATTCAGGAGGCTGTGGAATGGGAGCACAAGAGCAAAGTAGCCGGCAAAATGCATGCTTGTGGGCACGATGCGCATGTGACTATGCTAATTGGCGCTGCCAAGCTCTTGAAGAGCCGTGAGCACCTTCTCAAGGGAACTGTAATATTGCTATTTCAGCCGGCGGAGGAAGCGGGTAATGGTGCAAAGAGAATGATCCGAGATGGCGCTTTGGAGGATGTGGAGGCCATATTTGCAGCTCATGTATCCCATGAGCACCCAACTGGCGTCATCGGATCAAGGGTTGGACCTCTCCTAGCTGGCTGTGGCTTCTTCCGAGCTGTTATCAGTGGAACCACAGGCCAAGCTGAAAGCCCCCACATCTCTACTGACCCTGTTTTGGCTGCTGCCGCAGCTGTCATCAGCTTGCAGGGCATCGTGTCTCGAGAATCAAACCCCTTGGACTCTCAGGTTGTTTCTGTGACTGCATTCAATGGAGGCGATGATCTTGGGATGATACCAAACACTGTGGTACTTGGCGGTACTTTCAGGGCTTTCTCCAACACAAGTTTGTACAGAATTCTTCAAAGAATTGAAGAGGTAATTGTGGAGCAAGCAAGCGTTTACAGATGCTCAGCAACGGTAGACTTCTTCAAAAACCAGAACACCATATACCCACCAACAGTGAACGATGAGAAAATGCATGAGCATGTGACCAAAGTGGCCGTCGATTTGCTGGGCCCCACTAACTTCAGGGTGGTGCCACCCATGATGGGGGCGGAGGACTTCTCATTCTACTCGGAGGTCATCCCTGCTGGCTTCTTCTACATCGGGATCAGAAACGAGACCTTGGGTTCCACACACACAGGTCACTCTCCTTATTTTTTCATTGACGAAGATGTTTTGCCCATTGGGGCTGCAACTCATGCCACAATTGCAGAAAGGTACCTCAACGAGCGGTCGAGGGTGATCACAGACGGGTGGTTTAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0002682 GO:0002831 GO:0003674 GO:0003824 GO:0006082 GO:0008150 GO:0008152 GO:0009694 GO:0009719 GO:0009725 GO:0009753 GO:0009987 GO:0010033 GO:0010112 GO:0010817 GO:0016787 GO:0016810 GO:0019752 GO:0031347 GO:0032101 GO:0032787 GO:0042221 GO:0042445 GO:0043436 GO:0043900 GO:0044237 GO:0044281 GO:0045088 GO:0048583 GO:0050776 GO:0050789 GO:0050896 GO:0065007 GO:0065008 GO:0071704 GO:0080134 GO:1901700 GO:1990206

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

M20_dimer Peptidase_M20

Protein Analysis

498

Amino Acids

54.45

Weight (kDa)

5.89

Isoelectric Point (pI)

40.16

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010157)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G44350
fragaria_vesca	FvH4_2g27160 FvH4_2g27160
malus_domestica	MD08G1161700.v1.1 MD15G1346800.v1.1
prunus_persica	Prupe.1G494400_v2.0.a1 Prupe.1G494400_v2.0.a1
pyrus_communis	pycom08g13900 pycom15g31060
rosa_chinensis	RchiOBHm_Chr6g0296071
rosa_laevigata	RLG00000011736
rosa_multiflora	Rmu_sc0003139.1_g000031 Rmu_sc0004275.1_g000018
rosa_roxburghii	Rroxscaffold_7G00171850
rosa_rugosa	Rorug06G0256900 Rorug06G0257000
rosa_samantha	Rh6AG370300 Rh6BG377400 Rh6CG383300 Rh6DG370100
rosa_wichuraiana	Rw6G032270

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	104, 230
Acc16I	TGCGCA	1 cut(s)	597
Acc65I	GGTACC	1 cut(s)	1446
AccB1I	GGYRCC	2 cut(s)	1261, 1446
AccBSI	CCGCTC	1 cut(s)	1459
AccI	GTMKAC	1 cut(s)	1146
AccII	CGCG	2 cut(s)	92, 299
AccIII	TCCGGA	1 cut(s)	358
AclWI	GGATC	6 cut(s)	340, 353, 476, 712, 805, 1343
AcoI	YGGCCR	3 cut(s)	245, 305, 1224
AcsI	RAATTY	3 cut(s)	4, 40, 1080
AcuI	CTGAAG	2 cut(s)	347, 1237
AcyI	GRCGYC	3 cut(s)	101, 227, 789
AfaI	GTAC	4 cut(s)	1035, 1045, 1076, 1448
AfiI	CCNNNNNNNGG	4 cut(s)	655, 901, 1274, 1275
AgeI	ACCGGT	2 cut(s)	414, 432
AgsI	TTSAA	5 cut(s)	634, 994, 1088, 1097, 1156
AjuI	GAANNNNNNNTTGG	2 cut(s)	448, 480
AloI	GAACNNNNNNTCC	2 cut(s)	466, 498
Alw21I	GWGCWC	6 cut(s)	138, 278, 366, 552, 648, 780
Alw26I	GTCTC	5 cut(s)	237, 243, 377, 948, 1340
AlwI	GGATC	6 cut(s)	340, 353, 476, 712, 805, 1343
Ama87I	CYCGRG	1 cut(s)	945
Aor13HI	TCCGGA	1 cut(s)	358
AoxI	GGCC	6 cut(s)	245, 305, 747, 862, 1224, 1240
ApaI	GGGCCC	1 cut(s)	1244
ApeKI	GCWGC	7 cut(s)	252, 620, 758, 905, 908, 914, 1418
ApoI	RAATTY	3 cut(s)	4, 40, 1080
ArsI	GACNNNNNNTTYG	2 cut(s)	1212, 1244
AsiGI	ACCGGT	2 cut(s)	414, 432
Asp718I	GGTACC	1 cut(s)	1446
AspLEI	GCGC	3 cut(s)	598, 620, 731
AspS9I	GGNCC	5 cut(s)	412, 482, 809, 1240, 1241
AsuHPI	GGTGA	4 cut(s)	78, 210, 346, 1480
AvaI	CYCGRG	1 cut(s)	945
AvaII	GGWCC	3 cut(s)	412, 482, 809
BaeGI	GKGCMC	2 cut(s)	591, 1244
BamHI	GGATCC	1 cut(s)	345
BanI	GGYRCC	2 cut(s)	1261, 1446
BanII	GRGCYC	3 cut(s)	138, 366, 1244
BauI	CACGAG	1 cut(s)	350
BbsI	GAAGAC	3 cut(s)	55, 335, 455
Bbv12I	GWGCWC	6 cut(s)	138, 278, 366, 552, 648, 780
BbvI	GCAGC	7 cut(s)	239, 607, 770, 892, 895, 926, 1405
BccI	CCATC	2 cut(s)	719, 1267
BceAI	ACGGC	4 cut(s)	199, 482, 624, 1211
BciVI	GTATCC	1 cut(s)	778
BclI	TGATCA	2 cut(s)	10, 1470
BcoDI	GTCTC	5 cut(s)	237, 243, 377, 948, 1340
BfaI	CTAG	1 cut(s)	818
BfoI	RGCGCY	2 cut(s)	621, 732
BfuI	GTATCC	1 cut(s)	778
BisI	GCNGC	9 cut(s)	253, 305, 621, 759, 906, 909, 912, 915, 1419
BlpI	GCTNAGC	1 cut(s)	1135
BlsI	GCNGC	9 cut(s)	254, 306, 622, 760, 907, 910, 913, 916, 1420
Bme18I	GGWCC	3 cut(s)	412, 482, 809
BmeT110I	CYCGRG	1 cut(s)	945
BmgT120I	GGNCC	5 cut(s)	412, 482, 809, 1240, 1241
BmiI	GGNNCC	9 cut(s)	96, 347, 475, 856, 1242, 1243, 1263, 1357, 1448
BmsI	GCATC	5 cut(s)	146, 364, 583, 945, 1121
BpiI	GAAGAC	3 cut(s)	55, 335, 455
BplI	GAGNNNNNCTC	4 cut(s)	260, 292, 1274, 1306
Bpu1102I	GCTNAGC	1 cut(s)	1135
BpuEI	CTTGAG	1 cut(s)	638
BsaHI	GRCGYC	3 cut(s)	101, 227, 789
BsaI	GGTCTC	1 cut(s)	1340
BsaJI	CCNNGG	5 cut(s)	90, 196, 242, 960, 1350
BsaWI	WCCGGW	4 cut(s)	358, 414, 432, 452
BsaXI	ACNNNNNCTCC	2 cut(s)	217, 247
Bsc4I	CCNNNNNNNGG	4 cut(s)	655, 901, 1274, 1275
Bse118I	RCCGGY	6 cut(s)	390, 414, 432, 476, 566, 682
Bse1I	ACTGG	1 cut(s)	790
BseAI	TCCGGA	1 cut(s)	358
BseDI	CCNNGG	5 cut(s)	90, 196, 242, 960, 1350
BseGI	GGATG	5 cut(s)	355, 409, 745, 1020, 1308
BseLI	CCNNNNNNNGG	4 cut(s)	655, 901, 1274, 1275
BseMII	CTCAG	3 cut(s)	179, 983, 1149
BseNI	ACTGG	1 cut(s)	790
BseRI	GAGGAG	2 cut(s)	231, 389
BseSI	GKGCMC	2 cut(s)	591, 1244
BseX3I	CGGCCG	2 cut(s)	245, 305
BseXI	GCAGC	7 cut(s)	239, 607, 770, 892, 895, 926, 1405
BseYI	CCCAGC	1 cut(s)	1237
Bsh1236I	CGCG	2 cut(s)	92, 299
Bsh1285I	CGRYCG	3 cut(s)	248, 308, 1463
BshFI	GGCC	6 cut(s)	247, 307, 749, 864, 1226, 1242
BshNI	GGYRCC	2 cut(s)	1261, 1446
BshTI	ACCGGT	2 cut(s)	414, 432
BsiEI	CGRYCG	3 cut(s)	248, 308, 1463
BsiHKAI	GWGCWC	6 cut(s)	138, 278, 366, 552, 648, 780
BsiHKCI	CYCGRG	1 cut(s)	945
BslI	CCNNNNNNNGG	4 cut(s)	655, 901, 1274, 1275
BsmAI	GTCTC	5 cut(s)	237, 243, 377, 948, 1340
BsmBI	CGTCTC	3 cut(s)	237, 243, 377
BsmI	GAATGC	1 cut(s)	989
BsnI	GGCC	6 cut(s)	247, 307, 749, 864, 1226, 1242
Bso31I	GGTCTC	1 cut(s)	1340
BsoBI	CYCGRG	1 cut(s)	945
Bsp120I	GGGCCC	1 cut(s)	1240
Bsp1286I	GDGCHC	8 cut(s)	138, 278, 366, 552, 591, 648, 780, 1244
Bsp13I	TCCGGA	1 cut(s)	358
Bsp1407I	TGTACA	1 cut(s)	1074
Bsp143I	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
Bsp1720I	GCTNAGC	1 cut(s)	1135
Bsp68I	TCGCGA	1 cut(s)	299
BspANI	GGCC	6 cut(s)	247, 307, 749, 864, 1226, 1242
BspCNI	CTCAG	3 cut(s)	180, 982, 1148
BspEI	TCCGGA	1 cut(s)	358
BspFNI	CGCG	2 cut(s)	92, 299
BspLI	GGNNCC	9 cut(s)	96, 347, 475, 856, 1242, 1243, 1263, 1357, 1448
BspPI	GGATC	6 cut(s)	340, 353, 476, 712, 805, 1343
BspQI	GCTCTTC	2 cut(s)	525, 629
BspT107I	GGYRCC	2 cut(s)	1261, 1446
BspTNI	GGTCTC	1 cut(s)	1340
BsrBI	CCGCTC	1 cut(s)	1459
BsrFI	RCCGGY	6 cut(s)	390, 414, 432, 476, 566, 682
BsrGI	TGTACA	1 cut(s)	1074
BsrI	ACTGG	1 cut(s)	790
BssAI	RCCGGY	6 cut(s)	390, 414, 432, 476, 566, 682
BssECI	CCNNGG	5 cut(s)	90, 196, 242, 960, 1350
BssMI	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
BssNI	GRCGYC	3 cut(s)	101, 227, 789
BssSI	CACGAG	1 cut(s)	350
BssT1I	CCWWGG	2 cut(s)	960, 1350
Bst2BI	CACGAG	1 cut(s)	350
Bst4CI	ACNGT	6 cut(s)	146, 334, 664, 1030, 1144, 1186
Bst6I	CTCTTC	4 cut(s)	74, 525, 629, 1092
BstACI	GRCGYC	3 cut(s)	101, 227, 789
BstAPI	GCANNNNNTGC	1 cut(s)	1427
BstAUI	TGTACA	1 cut(s)	1074
BstDEI	CTNAG	3 cut(s)	188, 969, 1135
BstDSI	CCRYGG	2 cut(s)	90, 196
BstEII	GGTNACC	1 cut(s)	428
BstENI	CCTNNNNNAGG	1 cut(s)	653
BstF5I	GGATG	5 cut(s)	355, 409, 745, 1020, 1308
BstFNI	CGCG	2 cut(s)	92, 299
BstH2I	RGCGCY	2 cut(s)	621, 732
BstHHI	GCGC	3 cut(s)	598, 620, 731
BstKTI	GATC	9 cut(s)	13, 115, 348, 471, 720, 800, 1009, 1338, 1473
BstMAI	GTCTC	5 cut(s)	237, 243, 377, 948, 1340
BstMBI	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
BstMCI	CGRYCG	3 cut(s)	248, 308, 1463
BstNSI	RCATGY	3 cut(s)	581, 602, 1214
BstPI	GGTNACC	1 cut(s)	428
BstSLI	GKGCMC	2 cut(s)	591, 1244
BstUI	CGCG	2 cut(s)	92, 299
BstV1I	GCAGC	7 cut(s)	239, 607, 770, 892, 895, 926, 1405
BstV2I	GAAGAC	3 cut(s)	55, 335, 455
BstX2I	RGATCY	1 cut(s)	345
BstYI	RGATCY	1 cut(s)	345
BstZI	CGGCCG	2 cut(s)	245, 305
BsuI	GTATCC	1 cut(s)	778
BsuRI	GGCC	6 cut(s)	247, 307, 749, 864, 1226, 1242
BtgI	CCRYGG	2 cut(s)	90, 196
BtgZI	GCGATG	1 cut(s)	1017
BtsCI	GGATG	5 cut(s)	355, 409, 745, 1020, 1308
BtsIMutI	CAGTG	4 cut(s)	51, 856, 1026, 1191
BtuMI	TCGCGA	1 cut(s)	299
CfoI	GCGC	3 cut(s)	598, 620, 731
Cfr10I	RCCGGY	6 cut(s)	390, 414, 432, 476, 566, 682
Cfr13I	GGNCC	5 cut(s)	412, 482, 809, 1240, 1241
Cfr42I	CCGCGG	1 cut(s)	93
CseI	GACGC	2 cut(s)	524, 778
Csp6I	GTAC	4 cut(s)	1034, 1044, 1075, 1447
CspAI	ACCGGT	2 cut(s)	414, 432
CspCI	CAANNNNNGTGG	2 cut(s)	1011, 1046
CviAII	CATG	9 cut(s)	511, 578, 599, 764, 773, 1205, 1211, 1270, 1427
CviQI	GTAC	4 cut(s)	1034, 1044, 1075, 1447
DdeI	CTNAG	3 cut(s)	188, 969, 1135
DpnI	GATC	9 cut(s)	12, 114, 347, 470, 719, 799, 1008, 1337, 1472
DpnII	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
EaeI	YGGCCR	3 cut(s)	245, 305, 1224
EagI	CGGCCG	2 cut(s)	245, 305
Eam1104I	CTCTTC	4 cut(s)	74, 525, 629, 1092
EarI	CTCTTC	4 cut(s)	74, 525, 629, 1092
EciI	GGCGGA	4 cut(s)	201, 355, 701, 1295
Ecl136II	GAGCTC	2 cut(s)	136, 364
EclXI	CGGCCG	2 cut(s)	245, 305
Eco130I	CCWWGG	2 cut(s)	960, 1350
Eco24I	GRGCYC	3 cut(s)	138, 366, 1244
Eco31I	GGTCTC	1 cut(s)	1340
Eco47I	GGWCC	3 cut(s)	412, 482, 809
Eco52I	CGGCCG	2 cut(s)	245, 305
Eco53kI	GAGCTC	2 cut(s)	136, 364
Eco57I	CTGAAG	2 cut(s)	347, 1237
Eco88I	CYCGRG	1 cut(s)	945
Eco91I	GGTNACC	1 cut(s)	428
EcoICRI	GAGCTC	2 cut(s)	136, 364
EcoNI	CCTNNNNNAGG	1 cut(s)	653
EcoO109I	RGGNCCY	1 cut(s)	1241
EcoO65I	GGTNACC	1 cut(s)	428
EcoRI	GAATTC	1 cut(s)	1080
EcoT14I	CCWWGG	2 cut(s)	960, 1350
EcoT22I	ATGCAT	2 cut(s)	579, 1206
EcoT38I	GRGCYC	3 cut(s)	138, 366, 1244
ErhI	CCWWGG	2 cut(s)	960, 1350
Esp3I	CGTCTC	3 cut(s)	237, 243, 377
FaeI	CATG	9 cut(s)	514, 581, 602, 767, 776, 1208, 1214, 1273, 1430
FatI	CATG	9 cut(s)	510, 577, 598, 763, 772, 1204, 1210, 1269, 1426
FauI	CCCGC	2 cut(s)	97, 688
FbaI	TGATCA	2 cut(s)	10, 1470
FblI	GTMKAC	1 cut(s)	1146
Fnu4HI	GCNGC	9 cut(s)	253, 305, 621, 759, 906, 909, 912, 915, 1419
FokI	GGATG	5 cut(s)	342, 416, 752, 1027, 1295
FriOI	GRGCYC	3 cut(s)	138, 366, 1244
Fsp4HI	GCNGC	9 cut(s)	253, 305, 621, 759, 906, 909, 912, 915, 1419
FspAI	RTGCGCAY	1 cut(s)	597
FspBI	CTAG	1 cut(s)	818
FspI	TGCGCA	1 cut(s)	597
GlaI	GCGC	3 cut(s)	597, 619, 730
GluI	GCNGC	9 cut(s)	253, 305, 621, 759, 906, 909, 912, 915, 1419
GsaI	CCCAGC	1 cut(s)	1241
HaeII	RGCGCY	2 cut(s)	621, 732
HaeIII	GGCC	6 cut(s)	247, 307, 749, 864, 1226, 1242
HgaI	GACGC	2 cut(s)	524, 778
HhaI	GCGC	3 cut(s)	598, 620, 731
Hin1I	GRCGYC	3 cut(s)	101, 227, 789
Hin1II	CATG	9 cut(s)	514, 581, 602, 767, 776, 1208, 1214, 1273, 1430
Hin6I	GCGC	3 cut(s)	596, 618, 729
HinP1I	GCGC	3 cut(s)	596, 618, 729
HinfI	GANTC	4 cut(s)	184, 456, 950, 965
HphI	GGTGA	4 cut(s)	78, 210, 346, 1480
Hpy166II	GTNNAC	3 cut(s)	1126, 1147, 1189
Hpy188III	TCNNGA	9 cut(s)	298, 359, 382, 401, 530, 631, 945, 947, 1333
Hpy8I	GTNNAC	3 cut(s)	1126, 1147, 1189
Hpy99I	CGWCG	6 cut(s)	103, 106, 134, 229, 232, 1232
HpyAV	CCTTC	1 cut(s)	659
HpyCH4III	ACNGT	6 cut(s)	146, 334, 664, 1030, 1144, 1186
HpyCH4IV	ACGT	2 cut(s)	101, 227
HpyCH4V	TGCA	9 cut(s)	159, 577, 707, 758, 931, 989, 1204, 1421, 1439
HpyF3I	CTNAG	3 cut(s)	188, 969, 1135
HpySE526I	ACGT	2 cut(s)	101, 227
Hsp92I	GRCGYC	3 cut(s)	101, 227, 789
Hsp92II	CATG	9 cut(s)	514, 581, 602, 767, 776, 1208, 1214, 1273, 1430
HspAI	GCGC	3 cut(s)	596, 618, 729
Kpn2I	TCCGGA	1 cut(s)	358
KpnI	GGTACC	1 cut(s)	1450
KroI	GCCGGC	2 cut(s)	566, 682
KroNI	GCCGGC	2 cut(s)	568, 684
Ksp22I	TGATCA	2 cut(s)	10, 1470
KspI	CCGCGG	1 cut(s)	93
Kzo9I	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
LguI	GCTCTTC	2 cut(s)	525, 629
LmnI	GCTCC	3 cut(s)	361, 547, 1111
Lsp1109I	GCAGC	7 cut(s)	239, 607, 770, 892, 895, 926, 1405
LweI	GCATC	5 cut(s)	146, 364, 583, 945, 1121
MaeI	CTAG	1 cut(s)	818
MaeII	ACGT	2 cut(s)	101, 227
MaeIII	GTNAC	6 cut(s)	216, 428, 601, 982, 1213, 1370
MalI	GATC	9 cut(s)	12, 114, 347, 470, 719, 799, 1008, 1337, 1472
MbiI	CCGCTC	1 cut(s)	1459
MboI	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
MfeI	CAATTG	1 cut(s)	1434
MflI	RGATCY	1 cut(s)	345
MhlI	GDGCHC	8 cut(s)	138, 278, 366, 552, 591, 648, 780, 1244
MlyI	GAGTC	1 cut(s)	959
MmeI	TCCRAC	4 cut(s)	390, 399, 787, 1086
Mph1103I	ATGCAT	2 cut(s)	579, 1206
MroI	TCCGGA	1 cut(s)	358
MroNI	GCCGGC	2 cut(s)	566, 682
MseI	TTAA	2 cut(s)	80, 1488
MslI	CAYNNNNRTG	2 cut(s)	582, 1209
MspA1I	CMGCKG	2 cut(s)	92, 917
MunI	CAATTG	1 cut(s)	1434
Mva1269I	GAATGC	1 cut(s)	989
MvnI	CGCG	2 cut(s)	92, 299
NaeI	GCCGGC	2 cut(s)	568, 684
NdeII	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
NgoMIV	GCCGGC	2 cut(s)	566, 682
NlaIII	CATG	9 cut(s)	514, 581, 602, 767, 776, 1208, 1214, 1273, 1430
NlaIV	GGNNCC	9 cut(s)	96, 347, 475, 856, 1242, 1243, 1263, 1357, 1448
NmeAIII	GCCGAG	2 cut(s)	223, 273
NmuCI	GTSAC	5 cut(s)	216, 601, 982, 1213, 1370
NruI	TCGCGA	1 cut(s)	299
NsbI	TGCGCA	1 cut(s)	597
NsiI	ATGCAT	2 cut(s)	579, 1206
NspI	RCATGY	3 cut(s)	581, 602, 1214
PaeI	GCATGC	1 cut(s)	581
PaeR7I	CTCGAG	1 cut(s)	945
PciSI	GCTCTTC	2 cut(s)	525, 629
PcsI	WCGNNNNNNNCGW	3 cut(s)	135, 233, 378
PctI	GAATGC	1 cut(s)	989
PdiI	GCCGGC	2 cut(s)	568, 684
PfeI	GAWTC	3 cut(s)	184, 456, 950
PflFI	GACNNNGTC	2 cut(s)	103, 229
PinAI	ACCGGT	2 cut(s)	414, 432
PkrI	GCNGC	9 cut(s)	254, 306, 622, 760, 907, 910, 913, 916, 1420
PleI	GAGTC	1 cut(s)	959
PpsI	GAGTC	1 cut(s)	959
Psp124BI	GAGCTC	2 cut(s)	138, 366
PspEI	GGTNACC	1 cut(s)	428
PspFI	CCCAGC	1 cut(s)	1237
PspN4I	GGNNCC	9 cut(s)	96, 347, 475, 856, 1242, 1243, 1263, 1357, 1448
PspOMI	GGGCCC	1 cut(s)	1240
PspPI	GGNCC	5 cut(s)	412, 482, 809, 1240, 1241
PsrI	GAACNNNNNNTAC	2 cut(s)	1157, 1189
PsuI	RGATCY	1 cut(s)	345
PsyI	GACNNNGTC	2 cut(s)	103, 229
PvuII	CAGCTG	1 cut(s)	917
RruI	TCGCGA	1 cut(s)	299
RsaI	GTAC	4 cut(s)	1035, 1045, 1076, 1448
RsaNI	GTAC	4 cut(s)	1034, 1044, 1075, 1447
RseI	CAYNNNNRTG	2 cut(s)	582, 1209
SacI	GAGCTC	2 cut(s)	138, 366
SacII	CCGCGG	1 cut(s)	93
SapI	GCTCTTC	2 cut(s)	525, 629
SaqAI	TTAA	2 cut(s)	80, 1488
SatI	GCNGC	9 cut(s)	253, 305, 621, 759, 906, 909, 912, 915, 1419
Sau3AI	GATC	9 cut(s)	10, 112, 345, 468, 717, 797, 1006, 1335, 1470
Sau96I	GGNCC	5 cut(s)	412, 482, 809, 1240, 1241
SchI	GAGTC	1 cut(s)	959
SduI	GDGCHC	8 cut(s)	138, 278, 366, 552, 591, 648, 780, 1244
SfaNI	GCATC	5 cut(s)	146, 364, 583, 945, 1121
Sfr274I	CTCGAG	1 cut(s)	945
Sfr303I	CCGCGG	1 cut(s)	93
SgrBI	CCGCGG	1 cut(s)	93
SinI	GGWCC	3 cut(s)	412, 482, 809
SlaI	CTCGAG	1 cut(s)	945
SmiMI	CAYNNNNRTG	2 cut(s)	582, 1209
SmlI	CTYRAG	2 cut(s)	653, 945
SmoI	CTYRAG	2 cut(s)	653, 945
SphI	GCATGC	1 cut(s)	581
SspI	AATATT	1 cut(s)	669
SspMI	CTAG	1 cut(s)	818
SstI	GAGCTC	2 cut(s)	138, 366
StyI	CCWWGG	2 cut(s)	960, 1350
TaaI	ACNGT	6 cut(s)	146, 334, 664, 1030, 1144, 1186
TaiI	ACGT	2 cut(s)	104, 230
TaqI	TCGA	9 cut(s)	132, 138, 178, 224, 372, 381, 946, 1230, 1463
TatI	WGTACW	1 cut(s)	1074
TauI	GCSGC	2 cut(s)	307, 914
TfiI	GAWTC	3 cut(s)	184, 456, 950
Tru1I	TTAA	2 cut(s)	80, 1488
Tru9I	TTAA	2 cut(s)	80, 1488
TscAI	CASTG	4 cut(s)	51, 856, 1033, 1191
TseFI	GTSAC	5 cut(s)	216, 601, 982, 1213, 1370
TseI	GCWGC	7 cut(s)	252, 620, 758, 905, 908, 914, 1418
Tsp45I	GTSAC	5 cut(s)	216, 601, 982, 1213, 1370
TspDTI	ATGAA	3 cut(s)	17, 40, 1378
TspGWI	ACGGA	4 cut(s)	49, 225, 281, 477
TspRI	CASTG	4 cut(s)	51, 856, 1033, 1191
Tth111I	GACNNNGTC	2 cut(s)	103, 229
VpaK11BI	GGWCC	3 cut(s)	412, 482, 809
XagI	CCTNNNNNAGG	1 cut(s)	653
XapI	RAATTY	3 cut(s)	4, 40, 1080
XceI	RCATGY	3 cut(s)	581, 602, 1214
XhoI	CTCGAG	1 cut(s)	945
XmiI	GTMKAC	1 cut(s)	1146
XspI	CTAG	1 cut(s)	818
ZraI	GACGTC	2 cut(s)	102, 228
Zsp2I	ATGCAT	2 cut(s)	579, 1206

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.