pycom08g18880

Dienelactone hydrolase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr8
OG0011294
Physical Location & Seq
Forward (+)
18938352 .. 18940655
2304 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 1041 bp
ATGAAAGATATGAATTGGCTGTTGTACTCAACTGGAAGTGGAAGCGGGAAGCTACCAACGCCACAGCCGTCGTCGGCGGCTTCCATGTTTCTCAGAAGCAAAACAAAAACAAGAAGAAGCAGCCTAAATCATCGATTCGATTTCATTTCAACATTTTCTGCTTCTCCTCTGCGGGCCGCCGCCGCCGCCTCCTCCTCAACGCAACGCAACGCAAGTCGTCGGAGGTCAGCTGCAGCGAGTACAGGCACAAGAGTTGCTTGTAGCCTACTAAAAGCGGAAGACAACGTAAATGACGACGAAACATGTGAGCTAGTCAGTGGATTTGAAGTTTCAGTTGACGGCGAGGGTGTTGCCGGTACCATCAACGCTTATCTCTTCAAGGCAGTCAAAAACAATAACGGAATTGGGATACTTCTCTTGTCTGACATCTTTGGCTTCGAAGATTCATCCACCAGAGAGTTTGCATATCGCATTGCCTGCAACGGTTACAACGTTTTACTTCCGGACCTATTCCGCGGAGATCCATGGACAAAGGACCGCCCGAAGGTTGATTTTGAGAAGTGGATTGCTGAACAAGAAGCTCAAGGGGTTGCAAAAGACATTGCCGCGTGTGCAAAATGGATGGTTGATGAGTTTGCAGCTGCAGGGATCTCAAACAAGCTTGGCTTGATAGGTTTTTGCTACGGAGGTGGCAAAGTGATCGAGGTGTTGGCGCAGGACCAGGGCGCTTATTTCGGGATTGGGGTCTCATTCTACGGAACAAGGATGGACGACACATCTGTAGCTTCTAATGTGAAGGTTCCTGTATTGTTTATTACAGGGGACAACGACCCGCTGTGTCGTGTGAGCGTGGTAGAAAGTATTGAGAAGATCATCGGCAGGGGATCGAGGGTGGTGAGTTTCAAGGGGAGAGGCCATGGCTTTGCGCACCGACCTCAGTCGTTTGAAGAAGATGAAGATGCAGAGAAAGCTTTCACTTTGATGAGAAATTGGCTTGATGGCTTGCTTGCAATTGCAAATGCAAATGCAAATGCAGGTTAA

Protein Analysis

347

Amino Acids

37.34

Weight (kDa)

6.36

Isoelectric Point (pI)

35.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DLH PF01738 121 - 333 1.4e-27 Dienelactone hydrolase family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0011294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G35420 AT1G35420 AT1G35420
fragaria_vesca FvH4_5g31620 FvH4_5g31620
malus_domestica MD08G1217800.v1.1
prunus_persica Prupe.1G555600_v2.0.a1
pyrus_communis pycom08g18880
rosa_chinensis RchiOBHm_Chr7g0227151
rosa_laevigata RLG00000001664
rosa_multiflora Rmu_co8431879.1_g000001 Rmu_sc0003153.1_g000019
rosa_roxburghii Rroxscaffold_3G00232270
rosa_rugosa Rorug07G0241000 Rorug07G0241000
rosa_samantha Rh7AG390900 Rh7BG375900 Rh7CG409900 Rh7DG388200
rosa_wichuraiana Rw7G032700

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 927
Acc36I ACCTGC 1 cut(s) 1025
Acc65I GGTACC 1 cut(s) 356
AccB1I GGYRCC 1 cut(s) 356
AccII CGCG 2 cut(s) 516, 608
AccIII TCCGGA 1 cut(s) 502
AclI AACGTT 1 cut(s) 492
AclWI GGATC 3 cut(s) 515, 656, 892
AfaI GTAC 3 cut(s) 26, 241, 358
AfiI CCNNNNNNNGG 1 cut(s) 544
AflIII ACRYGT 1 cut(s) 302
AgsI TTSAA 5 cut(s) 150, 326, 379, 904, 947
AjnI CCWGG 1 cut(s) 720
AluBI AGCT 8 cut(s) 52, 230, 310, 581, 641, 661, 785, 971
AluI AGCT 8 cut(s) 52, 230, 310, 581, 641, 661, 785, 971
Alw26I GTCTC 1 cut(s) 751
AlwI GGATC 3 cut(s) 515, 656, 892
Aor13HI TCCGGA 1 cut(s) 502
AoxI GGCC 2 cut(s) 174, 913
ApeKI GCWGC 5 cut(s) 120, 230, 233, 638, 641
Asp700I GAANNNNTTC 1 cut(s) 971
Asp718I GGTACC 1 cut(s) 356
AspLEI GCGC 3 cut(s) 715, 728, 928
AspS9I GGNCC 4 cut(s) 174, 505, 535, 718
AsuHPI GGTGA 1 cut(s) 907
AsuII TTCGAA 1 cut(s) 438
AvaII GGWCC 3 cut(s) 505, 535, 718
BanI GGYRCC 1 cut(s) 356
BbsI GAAGAC 1 cut(s) 285
BbvI GCAGC 5 cut(s) 132, 217, 245, 628, 650
BccI CCATC 4 cut(s) 368, 616, 760, 992
BceAI ACGGC 2 cut(s) 52, 355
BcgI CGANNNNNNTGC 4 cut(s) 332, 366, 682, 716
BciT130I CCWGG 1 cut(s) 722
BciVI GTATCC 1 cut(s) 402
BcoDI GTCTC 1 cut(s) 751
BfaI CTAG 1 cut(s) 311
BfmI CTRYAG 3 cut(s) 231, 642, 780
BfoI RGCGCY 1 cut(s) 729
BfuAI ACCTGC 1 cut(s) 1025
BfuI GTATCC 1 cut(s) 402
Bme1390I CCNGG 1 cut(s) 722
Bme18I GGWCC 3 cut(s) 505, 535, 718
BmgT120I GGNCC 4 cut(s) 174, 505, 535, 718
BmiI GGNNCC 2 cut(s) 358, 801
BmrFI CCNGG 1 cut(s) 722
BmsI GCATC 1 cut(s) 949
BoxI GACNNNNGTC 1 cut(s) 937
BpiI GAAGAC 1 cut(s) 285
Bpu14I TTCGAA 1 cut(s) 438
BpuEI CTTGAG 1 cut(s) 567
Bsa29I ATCGAT 1 cut(s) 133
BsaI GGTCTC 1 cut(s) 751
BsaJI CCNNGG 4 cut(s) 514, 524, 721, 916
BsaWI WCCGGW 1 cut(s) 502
Bsc4I CCNNNNNNNGG 1 cut(s) 544
Bse118I RCCGGY 1 cut(s) 353
Bse1I ACTGG 1 cut(s) 37
Bse3DI GCAATG 2 cut(s) 471, 600
BseAI TCCGGA 1 cut(s) 502
BseBI CCWGG 1 cut(s) 722
BseCI ATCGAT 1 cut(s) 133
BseDI CCNNGG 4 cut(s) 514, 524, 721, 916
BseGI GGATG 3 cut(s) 446, 627, 771
BseLI CCNNNNNNNGG 1 cut(s) 544
BseMI GCAATG 2 cut(s) 471, 600
BseMII CTCAG 2 cut(s) 106, 950
BseNI ACTGG 1 cut(s) 37
BseRI GAGGAG 3 cut(s) 156, 181, 184
BseXI GCAGC 5 cut(s) 132, 217, 245, 628, 650
Bsh1236I CGCG 2 cut(s) 516, 608
BshFI GGCC 2 cut(s) 176, 915
BshNI GGYRCC 1 cut(s) 356
BshVI ATCGAT 1 cut(s) 133
BsiSI CCGG 2 cut(s) 354, 503
BslFI GGGAC 1 cut(s) 836
BslI CCNNNNNNNGG 1 cut(s) 544
BsmAI GTCTC 1 cut(s) 751
BsmFI GGGAC 1 cut(s) 836
BsnI GGCC 2 cut(s) 176, 915
Bso31I GGTCTC 1 cut(s) 751
Bsp119I TTCGAA 1 cut(s) 438
Bsp13I TCCGGA 1 cut(s) 502
Bsp143I GATC 5 cut(s) 520, 648, 699, 870, 884
Bsp19I CCATGG 2 cut(s) 524, 916
BspANI GGCC 2 cut(s) 176, 915
BspCNI CTCAG 2 cut(s) 105, 949
BspDI ATCGAT 1 cut(s) 133
BspEI TCCGGA 1 cut(s) 502
BspFNI CGCG 2 cut(s) 516, 608
BspLI GGNNCC 2 cut(s) 358, 801
BspMAI CTGCAG 2 cut(s) 235, 646
BspMI ACCTGC 1 cut(s) 1025
BspPI GGATC 3 cut(s) 515, 656, 892
BspT104I TTCGAA 1 cut(s) 438
BspT107I GGYRCC 1 cut(s) 356
BspTNI GGTCTC 1 cut(s) 751
BsrDI GCAATG 2 cut(s) 471, 600
BsrFI RCCGGY 1 cut(s) 353
BsrI ACTGG 1 cut(s) 37
BssAI RCCGGY 1 cut(s) 353
BssECI CCNNGG 4 cut(s) 514, 524, 721, 916
BssMI GATC 5 cut(s) 520, 648, 699, 870, 884
BssT1I CCWWGG 2 cut(s) 524, 916
Bst2UI CCWGG 1 cut(s) 722
Bst4CI ACNGT 1 cut(s) 485
Bst6I CTCTTC 1 cut(s) 380
BstAPI GCANNNNNTGC 1 cut(s) 477
BstBI TTCGAA 1 cut(s) 438
BstC8I GCNNGC 4 cut(s) 174, 478, 1004, 1008
BstDEI CTNAG 2 cut(s) 92, 936
BstDSI CCRYGG 3 cut(s) 514, 524, 916
BstF5I GGATG 3 cut(s) 446, 627, 771
BstFNI CGCG 2 cut(s) 516, 608
BstH2I RGCGCY 1 cut(s) 729
BstHHI GCGC 3 cut(s) 715, 728, 928
BstKTI GATC 5 cut(s) 523, 651, 702, 873, 887
BstMAI GTCTC 1 cut(s) 751
BstMBI GATC 5 cut(s) 520, 648, 699, 870, 884
BstMWI GCNNNNNNNGC 6 cut(s) 58, 182, 185, 477, 611, 968
BstNI CCWGG 1 cut(s) 722
BstNSI RCATGY 1 cut(s) 306
BstPAI GACNNNNGTC 1 cut(s) 937
BstSCI CCNGG 1 cut(s) 720
BstSFI CTRYAG 3 cut(s) 231, 642, 780
BstUI CGCG 2 cut(s) 516, 608
BstV1I GCAGC 5 cut(s) 132, 217, 245, 628, 650
BstV2I GAAGAC 1 cut(s) 285
BstX2I RGATCY 2 cut(s) 520, 648
BstYI RGATCY 2 cut(s) 520, 648
Bsu15I ATCGAT 1 cut(s) 133
BsuI GTATCC 1 cut(s) 402
BsuRI GGCC 2 cut(s) 176, 915
BsuTUI ATCGAT 1 cut(s) 133
BtgI CCRYGG 3 cut(s) 514, 524, 916
BtsCI GGATG 3 cut(s) 446, 627, 771
BtsIMutI CAGTG 1 cut(s) 322
BveI ACCTGC 1 cut(s) 1025
Cac8I GCNNGC 4 cut(s) 174, 478, 1004, 1008
CfoI GCGC 3 cut(s) 715, 728, 928
Cfr10I RCCGGY 1 cut(s) 353
Cfr13I GGNCC 4 cut(s) 174, 505, 535, 718
Cfr42I CCGCGG 1 cut(s) 517
ClaI ATCGAT 1 cut(s) 133
Csp6I GTAC 3 cut(s) 25, 240, 357
CviAII CATG 4 cut(s) 85, 303, 525, 917
CviQI GTAC 3 cut(s) 25, 240, 357
DdeI CTNAG 2 cut(s) 92, 936
DpnI GATC 5 cut(s) 522, 650, 701, 872, 886
DpnII GATC 5 cut(s) 520, 648, 699, 870, 884
Eam1104I CTCTTC 1 cut(s) 380
EarI CTCTTC 1 cut(s) 380
Eco130I CCWWGG 2 cut(s) 524, 916
Eco31I GGTCTC 1 cut(s) 751
Eco47I GGWCC 3 cut(s) 505, 535, 718
EcoRII CCWGG 1 cut(s) 720
EcoT14I CCWWGG 2 cut(s) 524, 916
ErhI CCWWGG 2 cut(s) 524, 916
FaeI CATG 4 cut(s) 88, 306, 528, 920
FaiI YATR 6 cut(s) 11, 86, 304, 466, 526, 918
FalI AAGNNNNNCTT 4 cut(s) 241, 273, 650, 682
FaqI GGGAC 1 cut(s) 836
FatI CATG 4 cut(s) 84, 302, 524, 916
FauI CCCGC 3 cut(s) 38, 165, 840
FokI GGATG 3 cut(s) 433, 634, 778
FspBI CTAG 1 cut(s) 311
FspI TGCGCA 1 cut(s) 927
GlaI GCGC 3 cut(s) 714, 727, 927
HaeII RGCGCY 1 cut(s) 729
HaeIII GGCC 2 cut(s) 176, 915
HapII CCGG 2 cut(s) 354, 503
HhaI GCGC 3 cut(s) 715, 728, 928
Hin1II CATG 4 cut(s) 88, 306, 528, 920
Hin6I GCGC 3 cut(s) 713, 726, 926
HinP1I GCGC 3 cut(s) 713, 726, 926
HincII GTYRAC 1 cut(s) 337
HindII GTYRAC 1 cut(s) 337
HindIII AAGCTT 2 cut(s) 659, 969
HinfI GANTC 2 cut(s) 135, 443
HpaII CCGG 2 cut(s) 354, 503
HphI GGTGA 1 cut(s) 907
Hpy166II GTNNAC 1 cut(s) 337
Hpy188I TCNGA 3 cut(s) 95, 222, 424
Hpy188III TCNNGA 2 cut(s) 503, 736
Hpy8I GTNNAC 1 cut(s) 337
Hpy99I CGWCG 4 cut(s) 73, 76, 222, 299
HpyAV CCTTC 2 cut(s) 538, 790
HpyCH4III ACNGT 1 cut(s) 485
HpyCH4IV ACGT 2 cut(s) 285, 492
HpyF10VI GCNNNNNNNGC 6 cut(s) 58, 182, 185, 477, 611, 968
HpyF3I CTNAG 2 cut(s) 92, 936
HpySE526I ACGT 2 cut(s) 285, 492
Hsp92II CATG 4 cut(s) 88, 306, 528, 920
HspAI GCGC 3 cut(s) 713, 726, 926
Kpn2I TCCGGA 1 cut(s) 502
KpnI GGTACC 1 cut(s) 360
KspI CCGCGG 1 cut(s) 517
Kzo9I GATC 5 cut(s) 520, 648, 699, 870, 884
Lsp1109I GCAGC 5 cut(s) 132, 217, 245, 628, 650
LweI GCATC 1 cut(s) 949
MaeI CTAG 1 cut(s) 311
MaeII ACGT 2 cut(s) 285, 492
MaeIII GTNAC 1 cut(s) 485
MalI GATC 5 cut(s) 522, 650, 701, 872, 886
MboI GATC 5 cut(s) 520, 648, 699, 870, 884
MboII GAAGA 8 cut(s) 126, 290, 367, 452, 880, 959, 962, 968
MfeI CAATTG 1 cut(s) 1011
MflI RGATCY 2 cut(s) 520, 648
MluCI AATT 4 cut(s) 13, 402, 988, 1011
MmeI TCCRAC 1 cut(s) 200
MroI TCCGGA 1 cut(s) 502
MroXI GAANNNNTTC 1 cut(s) 971
MseI TTAA 1 cut(s) 1039
MslI CAYNNNNRTG 1 cut(s) 980
MspA1I CMGCKG 4 cut(s) 230, 516, 641, 835
MspI CCGG 2 cut(s) 354, 503
MspR9I CCNGG 1 cut(s) 722
MunI CAATTG 1 cut(s) 1011
MvaI CCWGG 1 cut(s) 722
MvnI CGCG 2 cut(s) 516, 608
MwoI GCNNNNNNNGC 6 cut(s) 58, 182, 185, 477, 611, 968
NcoI CCATGG 2 cut(s) 524, 916
NdeII GATC 5 cut(s) 520, 648, 699, 870, 884
NlaIII CATG 4 cut(s) 88, 306, 528, 920
NlaIV GGNNCC 2 cut(s) 358, 801
NsbI TGCGCA 1 cut(s) 927
NspI RCATGY 1 cut(s) 306
NspV TTCGAA 1 cut(s) 438
PciI ACATGT 1 cut(s) 302
PcsI WCGNNNNNNNCGW 3 cut(s) 65, 291, 489
PdmI GAANNNNTTC 1 cut(s) 971
PfeI GAWTC 2 cut(s) 135, 443
PscI ACATGT 1 cut(s) 302
PshAI GACNNNNGTC 1 cut(s) 937
Psp1406I AACGTT 1 cut(s) 492
Psp6I CCWGG 1 cut(s) 720
PspGI CCWGG 1 cut(s) 720
PspN4I GGNNCC 2 cut(s) 358, 801
PspPI GGNCC 4 cut(s) 174, 505, 535, 718
PstI CTGCAG 2 cut(s) 235, 646
PsuI RGATCY 2 cut(s) 520, 648
PvuII CAGCTG 2 cut(s) 230, 641
RsaI GTAC 3 cut(s) 26, 241, 358
RsaNI GTAC 3 cut(s) 25, 240, 357
RseI CAYNNNNRTG 1 cut(s) 980
SacII CCGCGG 1 cut(s) 517
SaqAI TTAA 1 cut(s) 1039
Sau3AI GATC 5 cut(s) 520, 648, 699, 870, 884
Sau96I GGNCC 4 cut(s) 174, 505, 535, 718
ScrFI CCNGG 1 cut(s) 722
SfaNI GCATC 1 cut(s) 949
SfcI CTRYAG 3 cut(s) 231, 642, 780
Sfr303I CCGCGG 1 cut(s) 517
SfuI TTCGAA 1 cut(s) 438
SgrBI CCGCGG 1 cut(s) 517
SinI GGWCC 3 cut(s) 505, 535, 718
SmiMI CAYNNNNRTG 1 cut(s) 980
SmlI CTYRAG 1 cut(s) 582
SmoI CTYRAG 1 cut(s) 582
Sse9I AATT 4 cut(s) 13, 402, 988, 1011
SspMI CTAG 1 cut(s) 311
StyD4I CCNGG 1 cut(s) 720
StyI CCWWGG 2 cut(s) 524, 916
TaaI ACNGT 1 cut(s) 485
TaiI ACGT 2 cut(s) 288, 495
TaqI TCGA 5 cut(s) 133, 138, 438, 702, 887
TasI AATT 4 cut(s) 13, 402, 988, 1011
TatI WGTACW 2 cut(s) 24, 239
TauI GCSGC 6 cut(s) 80, 179, 182, 185, 188, 608
TfiI GAWTC 2 cut(s) 135, 443
Tru1I TTAA 1 cut(s) 1039
Tru9I TTAA 1 cut(s) 1039
TscAI CASTG 1 cut(s) 322
TseI GCWGC 5 cut(s) 120, 230, 233, 638, 641
TspDTI ATGAA 5 cut(s) 17, 26, 133, 435, 969
TspGWI ACGGA 3 cut(s) 414, 699, 771
TspRI CASTG 1 cut(s) 322
VpaK11BI GGWCC 3 cut(s) 505, 535, 718
XceI RCATGY 1 cut(s) 306
XmnI GAANNNNTTC 1 cut(s) 971
XspI CTAG 1 cut(s) 311
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.