Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr8

Orthogroup ID

OG0006641

Physical Location & Seq

Genomic Coordinates Reverse (-)

20288415 .. 20292930

Gene Structure 4516 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom08g20510.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1482 bp

ATGGCAGAACTGATGCTGCTTGGCCTAATATCGTTGTTGTTGTCACAATCGGCAAGGTGGATCTCTGGGATTTGTGTAAACTCTTCCCTTTTCACCAGTAAATTTTACATATGTTCCGAGGAAGATGACAGCACCAAGAAGCATGTCATGCTTGAAAGTTCTCCTAACAAGACTGAGATTCCAAGAGGATTAACTGATTTTTCTCATCAATGTGGTGAGGGCCGGGAACCGTTTGTTTCTTATGAGGGACTGGAGCAGCTGCACCGGTTCCTGTTCGTTCTTGGGATCATCCATGTGTTGTACAGTTGTTTGGCTGTGGCTTTGGCTATGAGCAAGATTTACAGTTGGAGGAAATGGGAAAATCAAGCAATCTCATTGGCTGATGCGAATTTTCAAGCAAAGAAAAACAAGGTCATGAGGCGGCAGTCTACCTTTATTTTCCATCACACATCTCATCCATGGAGCAGGAATCGGCTTCTAATTTGGATGCTCTGCTTTCTACGACAATTTAAGAGTTCTATGGAGAGATCAGATTACTTGGCTCTGCGTTCGGGCTTCATCAGTAAGCACAAACTTCCACTTTCTTATAATTTTCATAAATACATGGTCCGGAGTATGGAAGATGAATTTCAGGGCATTCTGGGTATTAGCTGCCCACTTTGGGGATATTCCATAGTCTGCATTTTCGTAAATGTTCATGGTTTGAATATTTACTTTTGGCTTTCTTTCATCCCTGCCATTCTTGTCATGCTGGTTGGAACGAAACTACAGCATGTCGTCTCTTCCTTGGCACTTGAAGTGGAACAAACAGGGCCAGCTAATGGGACTCAAGTAAAGCCACGTGATGATTTGTTTTGGTTTGGAAAACCTGTGATACTATTGCGGTTGATACAGTTCATCATATTTCAGAATGCCTTTGAGATGGCAACATTTCTCTGGTCCTTGTGGGGGCTTAAGGAGAGATCATGCTTCATGAAAAACCACTTAATGATTGCTATTCGGTTGACCTGCGGTGTTCTTGTTCAGTTCTGGTGTAGTTACGGCACAGTGCCTCTGAACGTAATTGTTACACAGATGGGATCCCAGTGTAAGAAAGCTCTTGTTGCTGAGAGTGTTAGAGATTCGCTCCATAGTTGGTGCAAGCGAGTAAAGGAGAGGTCTAAACACTCACACGCAACAAGGTCAGTTTGTTCACTTGATACAACAGACGAGAGGGATGAGATAACCGTTGCATCTGGTACCTTGTCTCGGAACTCATCCTTGGACTCCCTACATCAAGTAACGGTAGCACCAATGGAACAGCAACCCGAGACTGATCAACAGACTTCCGGACCATCTCAGCATGACTACTCATTTCGAGTGGAAGAGTATTTATCTGACGCGGTGAGAATCAGTGCATCACAGCCTCCGATAAACAGTGATGATGATGATGGAGTGGAAGAACAAATGGATACTCTATTGGAGTTGTTTCAGAAAACATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005623 GO:0005886 GO:0006950 GO:0006952 GO:0008150 GO:0016020 GO:0044464 GO:0050896 GO:0071944

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Mlo

Protein Analysis

494

Amino Acids

56.39

Weight (kDa)

7.25

Isoelectric Point (pI)

44.53

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006641)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11000 AT1G11000 AT1G11000
fragaria_vesca	FvH4_5g28810 FvH4_5g28810 FvH4_5g28810
malus_domestica	MD08G1236900.v1.1
prunus_persica	Prupe.1G574000_v2.0.a1 Prupe.1G574000_v2.0.a1 Prupe.1G574000_v2.0.a1 Prupe.1G574000_v2.0.a1 Prupe.1G574000_v2.0.a1
pyrus_communis	pycom08g20510
rosa_chinensis	RchiOBHm_Chr7g0221021
rosa_laevigata	RLG00000002183
rosa_multiflora	Rmu_co8452501.1_g000001 Rmu_sc0002105.1_g000005 Rmu_sc0012763.1_g000010
rosa_roxburghii	Rroxscaffold_3G00238800
rosa_rugosa	Rorug07G0199900 Rorug07G0200000
rosa_samantha	Rh7AG339300 Rh7BG330300 Rh7CG357300 Rh7DG338000
rosa_wichuraiana	Rw7G028860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	588
Acc36I	ACCTGC	1 cut(s)	1016
Acc65I	GGTACC	1 cut(s)	1238
AccB1I	GGYRCC	1 cut(s)	1238
AccB7I	CCANNNNNTGG	1 cut(s)	821
AccI	GTMKAC	1 cut(s)	428
AccII	CGCG	1 cut(s)	1382
AccIII	TCCGGA	2 cut(s)	609, 1328
AciI	CCGC	4 cut(s)	421, 883, 1011, 1382
AclWI	GGATC	4 cut(s)	68, 293, 1074, 1087
AcsI	RAATTY	3 cut(s)	101, 388, 626
AcvI	CACGTG	1 cut(s)	842
AfaI	GTAC	2 cut(s)	302, 1240
AfiI	CCNNNNNNNGG	6 cut(s)	616, 661, 662, 821, 948, 1248
AflII	CTTAAG	1 cut(s)	953
AgeI	ACCGGT	1 cut(s)	264
AgsI	TTSAA	4 cut(s)	155, 395, 706, 797
AjuI	GAANNNNNNNTTGG	2 cut(s)	1244, 1276
AluBI	AGCT	4 cut(s)	259, 651, 818, 1097
AluI	AGCT	4 cut(s)	259, 651, 818, 1097
Alw26I	GTCTC	3 cut(s)	784, 1251, 1304
AlwI	GGATC	4 cut(s)	68, 293, 1074, 1087
Ama87I	CYCGRG	1 cut(s)	1307
Aor13HI	TCCGGA	2 cut(s)	609, 1328
AoxI	GGCC	3 cut(s)	22, 220, 812
ApeKI	GCWGC	4 cut(s)	16, 256, 259, 651
ApoI	RAATTY	3 cut(s)	101, 388, 626
AsiGI	ACCGGT	1 cut(s)	264
Asp718I	GGTACC	1 cut(s)	1238
AspS9I	GGNCC	5 cut(s)	220, 607, 812, 939, 1331
AsuC2I	CCSGG	1 cut(s)	224
AsuHPI	GGTGA	3 cut(s)	85, 227, 1396
AvaI	CYCGRG	1 cut(s)	1307
AvaII	GGWCC	3 cut(s)	607, 939, 1331
BamHI	GGATCC	1 cut(s)	1079
BanI	GGYRCC	1 cut(s)	1238
BbrPI	CACGTG	1 cut(s)	842
BbvI	GCAGC	4 cut(s)	3, 246, 268, 638
BccI	CCATC	5 cut(s)	450, 916, 1069, 1342, 1424
BceAI	ACGGC	1 cut(s)	1057
BciVI	GTATCC	1 cut(s)	1444
BclI	TGATCA	1 cut(s)	1315
BcnI	CCSGG	1 cut(s)	224
BcoDI	GTCTC	3 cut(s)	784, 1251, 1304
BfmI	CTRYAG	1 cut(s)	767
BfrI	CTTAAG	1 cut(s)	953
BfuAI	ACCTGC	1 cut(s)	1016
BfuI	GTATCC	1 cut(s)	1444
BisI	GCNGC	5 cut(s)	17, 257, 260, 422, 652
BlsI	GCNGC	5 cut(s)	18, 258, 261, 423, 653
Bme1390I	CCNGG	1 cut(s)	224
Bme18I	GGWCC	3 cut(s)	607, 939, 1331
BmeT110I	CYCGRG	1 cut(s)	1307
BmgT120I	GGNCC	5 cut(s)	220, 607, 812, 939, 1331
BmiI	GGNNCC	4 cut(s)	228, 269, 1081, 1240
BmrFI	CCNGG	1 cut(s)	224
BmrI	ACTGGG	1 cut(s)	1078
BmsI	GCATC	5 cut(s)	3, 373, 477, 1241, 1406
BmuI	ACTGGG	1 cut(s)	1078
BplI	GAGNNNNNCTC	2 cut(s)	1110, 1142
BpmI	CTGGAG	1 cut(s)	272
BpuEI	CTTGAG	1 cut(s)	813
BpuMI	CCSGG	1 cut(s)	224
BsaAI	YACGTR	1 cut(s)	842
BsaJI	CCNNGG	4 cut(s)	117, 458, 786, 1260
BsaWI	WCCGGW	3 cut(s)	264, 609, 1328
Bsc4I	CCNNNNNNNGG	6 cut(s)	616, 661, 662, 821, 948, 1248
Bse118I	RCCGGY	1 cut(s)	264
Bse1I	ACTGG	3 cut(s)	96, 255, 1084
BseAI	TCCGGA	2 cut(s)	609, 1328
BseDI	CCNNGG	4 cut(s)	117, 458, 786, 1260
BseGI	GGATG	6 cut(s)	288, 454, 492, 729, 1222, 1256
BseLI	CCNNNNNNNGG	6 cut(s)	616, 661, 662, 821, 948, 1248
BseMII	CTCAG	3 cut(s)	165, 1098, 1352
BseNI	ACTGG	3 cut(s)	96, 255, 1084
BseXI	GCAGC	4 cut(s)	3, 246, 268, 638
BsgI	GTGCAG	1 cut(s)	245
Bsh1236I	CGCG	1 cut(s)	1382
BshFI	GGCC	3 cut(s)	24, 222, 814
BshNI	GGYRCC	1 cut(s)	1238
BshTI	ACCGGT	1 cut(s)	264
BsiHKCI	CYCGRG	1 cut(s)	1307
BsiSI	CCGG	4 cut(s)	223, 265, 610, 1329
BslFI	GGGAC	2 cut(s)	261, 838
BslI	CCNNNNNNNGG	6 cut(s)	616, 661, 662, 821, 948, 1248
BsmAI	GTCTC	3 cut(s)	784, 1251, 1304
BsmBI	CGTCTC	1 cut(s)	784
BsmFI	GGGAC	2 cut(s)	261, 838
BsmI	GAATGC	2 cut(s)	636, 916
BsnI	GGCC	3 cut(s)	24, 222, 814
BsoBI	CYCGRG	1 cut(s)	1307
Bsp13I	TCCGGA	2 cut(s)	609, 1328
Bsp1407I	TGTACA	1 cut(s)	300
Bsp143I	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
Bsp19I	CCATGG	1 cut(s)	458
BspACI	CCGC	4 cut(s)	421, 883, 1011, 1382
BspANI	GGCC	3 cut(s)	24, 222, 814
BspCNI	CTCAG	3 cut(s)	166, 1099, 1351
BspEI	TCCGGA	2 cut(s)	609, 1328
BspFNI	CGCG	1 cut(s)	1382
BspHI	TCATGA	2 cut(s)	414, 972
BspLI	GGNNCC	4 cut(s)	228, 269, 1081, 1240
BspMI	ACCTGC	1 cut(s)	1016
BspPI	GGATC	4 cut(s)	68, 293, 1074, 1087
BspT107I	GGYRCC	1 cut(s)	1238
BspTI	CTTAAG	1 cut(s)	953
BsrFI	RCCGGY	1 cut(s)	264
BsrGI	TGTACA	1 cut(s)	300
BsrI	ACTGG	3 cut(s)	96, 255, 1084
BssAI	RCCGGY	1 cut(s)	264
BssECI	CCNNGG	4 cut(s)	117, 458, 786, 1260
BssMI	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
BssT1I	CCWWGG	3 cut(s)	458, 786, 1260
Bst4CI	ACNGT	8 cut(s)	231, 305, 344, 894, 1048, 1228, 1285, 1418
Bst6I	CTCTTC	3 cut(s)	88, 787, 1359
BstAFI	CTTAAG	1 cut(s)	953
BstAPI	GCANNNNNTGC	1 cut(s)	148
BstAUI	TGTACA	1 cut(s)	300
BstBAI	YACGTR	1 cut(s)	842
BstC8I	GCNNGC	2 cut(s)	816, 1142
BstDEI	CTNAG	3 cut(s)	174, 1107, 1338
BstDSI	CCRYGG	1 cut(s)	458
BstF5I	GGATG	6 cut(s)	288, 454, 492, 729, 1222, 1256
BstFNI	CGCG	1 cut(s)	1382
BstKTI	GATC	6 cut(s)	63, 288, 530, 965, 1082, 1318
BstMAI	GTCTC	3 cut(s)	784, 1251, 1304
BstMBI	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
BstMWI	GCNNNNNNNGC	2 cut(s)	148, 1103
BstNSI	RCATGY	2 cut(s)	146, 776
BstSCI	CCNGG	1 cut(s)	222
BstSFI	CTRYAG	1 cut(s)	767
BstUI	CGCG	1 cut(s)	1382
BstV1I	GCAGC	4 cut(s)	3, 246, 268, 638
BstX2I	RGATCY	2 cut(s)	60, 1079
BstYI	RGATCY	2 cut(s)	60, 1079
BsuI	GTATCC	1 cut(s)	1444
BsuRI	GGCC	3 cut(s)	24, 222, 814
BtgI	CCRYGG	1 cut(s)	458
BtsCI	GGATG	6 cut(s)	288, 454, 492, 729, 1222, 1256
BtsIMutI	CAGTG	4 cut(s)	1053, 1091, 1399, 1423
BveI	ACCTGC	1 cut(s)	1016
Cac8I	GCNNGC	2 cut(s)	816, 1142
CciI	TCATGA	2 cut(s)	414, 972
Cfr10I	RCCGGY	1 cut(s)	264
Cfr13I	GGNCC	5 cut(s)	220, 607, 812, 939, 1331
CseI	GACGC	1 cut(s)	1388
Csp6I	GTAC	2 cut(s)	301, 1239
CspAI	ACCGGT	1 cut(s)	264
CviQI	GTAC	2 cut(s)	301, 1239
DdeI	CTNAG	3 cut(s)	174, 1107, 1338
DpnI	GATC	6 cut(s)	62, 287, 529, 964, 1081, 1317
DpnII	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
Eam1104I	CTCTTC	3 cut(s)	88, 787, 1359
EarI	CTCTTC	3 cut(s)	88, 787, 1359
Eco130I	CCWWGG	3 cut(s)	458, 786, 1260
Eco47I	GGWCC	3 cut(s)	607, 939, 1331
Eco72I	CACGTG	1 cut(s)	842
Eco88I	CYCGRG	1 cut(s)	1307
EcoT14I	CCWWGG	3 cut(s)	458, 786, 1260
ErhI	CCWWGG	3 cut(s)	458, 786, 1260
Esp3I	CGTCTC	1 cut(s)	784
FaqI	GGGAC	2 cut(s)	261, 838
FauNDI	CATATG	1 cut(s)	110
FbaI	TGATCA	1 cut(s)	1315
FblI	GTMKAC	1 cut(s)	428
Fnu4HI	GCNGC	5 cut(s)	17, 257, 260, 422, 652
FokI	GGATG	6 cut(s)	275, 441, 499, 716, 1229, 1243
Fsp4HI	GCNGC	5 cut(s)	17, 257, 260, 422, 652
GluI	GCNGC	5 cut(s)	17, 257, 260, 422, 652
GsuI	CTGGAG	1 cut(s)	272
HaeIII	GGCC	3 cut(s)	24, 222, 814
HapII	CCGG	4 cut(s)	223, 265, 610, 1329
HgaI	GACGC	1 cut(s)	1388
HincII	GTYRAC	1 cut(s)	1005
HindII	GTYRAC	1 cut(s)	1005
HinfI	GANTC	6 cut(s)	178, 469, 826, 1121, 1265, 1389
HpaII	CCGG	4 cut(s)	223, 265, 610, 1329
HphI	GGTGA	3 cut(s)	85, 227, 1396
Hpy166II	GTNNAC	4 cut(s)	79, 429, 1005, 1193
Hpy188I	TCNGA	8 cut(s)	118, 532, 909, 1056, 1251, 1378, 1410, 1473
Hpy188III	TCNNGA	4 cut(s)	415, 610, 973, 1329
Hpy8I	GTNNAC	4 cut(s)	79, 429, 1005, 1193
HpyCH4III	ACNGT	8 cut(s)	231, 305, 344, 894, 1048, 1228, 1285, 1418
HpyCH4IV	ACGT	2 cut(s)	841, 1059
HpyCH4V	TGCA	5 cut(s)	262, 681, 1140, 1232, 1397
HpyF10VI	GCNNNNNNNGC	2 cut(s)	148, 1103
HpyF3I	CTNAG	3 cut(s)	174, 1107, 1338
HpySE526I	ACGT	2 cut(s)	841, 1059
Kpn2I	TCCGGA	2 cut(s)	609, 1328
KpnI	GGTACC	1 cut(s)	1242
Ksp22I	TGATCA	1 cut(s)	1315
Kzo9I	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
LmnI	GCTCC	3 cut(s)	253, 462, 1131
Lsp1109I	GCAGC	4 cut(s)	3, 246, 268, 638
LweI	GCATC	5 cut(s)	3, 373, 477, 1241, 1406
MaeII	ACGT	2 cut(s)	841, 1059
MaeIII	GTNAC	4 cut(s)	42, 1037, 1066, 1279
MalI	GATC	6 cut(s)	62, 287, 529, 964, 1081, 1317
MboI	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
MboII	GAAGA	6 cut(s)	75, 134, 632, 774, 1376, 1451
MflI	RGATCY	2 cut(s)	60, 1079
MluCI	AATT	7 cut(s)	101, 388, 480, 506, 589, 626, 1062
MlyI	GAGTC	2 cut(s)	820, 1259
MmeI	TCCRAC	2 cut(s)	326, 736
MroI	TCCGGA	2 cut(s)	609, 1328
MseI	TTAA	4 cut(s)	191, 510, 954, 986
MslI	CAYNNNNRTG	2 cut(s)	210, 293
MspA1I	CMGCKG	1 cut(s)	259
MspCI	CTTAAG	1 cut(s)	953
MspI	CCGG	4 cut(s)	223, 265, 610, 1329
MspR9I	CCNGG	1 cut(s)	224
Mva1269I	GAATGC	2 cut(s)	636, 916
MvnI	CGCG	1 cut(s)	1382
MwoI	GCNNNNNNNGC	2 cut(s)	148, 1103
NciI	CCSGG	1 cut(s)	224
NcoI	CCATGG	1 cut(s)	458
NdeI	CATATG	1 cut(s)	110
NdeII	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
NlaIV	GGNNCC	4 cut(s)	228, 269, 1081, 1240
NmuCI	GTSAC	1 cut(s)	42
NspI	RCATGY	2 cut(s)	146, 776
PagI	TCATGA	2 cut(s)	414, 972
PctI	GAATGC	2 cut(s)	636, 916
PfeI	GAWTC	4 cut(s)	178, 469, 1121, 1389
PflMI	CCANNNNNTGG	1 cut(s)	821
PinAI	ACCGGT	1 cut(s)	264
PkrI	GCNGC	5 cut(s)	18, 258, 261, 423, 653
PleI	GAGTC	2 cut(s)	820, 1259
PmaCI	CACGTG	1 cut(s)	842
PmlI	CACGTG	1 cut(s)	842
PpsI	GAGTC	2 cut(s)	820, 1259
Ppu21I	YACGTR	1 cut(s)	842
PsiI	TTATAA	1 cut(s)	588
PspCI	CACGTG	1 cut(s)	842
PspN4I	GGNNCC	4 cut(s)	228, 269, 1081, 1240
PspPI	GGNCC	5 cut(s)	220, 607, 812, 939, 1331
PsuI	RGATCY	2 cut(s)	60, 1079
PvuII	CAGCTG	1 cut(s)	259
RsaI	GTAC	2 cut(s)	302, 1240
RsaNI	GTAC	2 cut(s)	301, 1239
RseI	CAYNNNNRTG	2 cut(s)	210, 293
SaqAI	TTAA	4 cut(s)	191, 510, 954, 986
SatI	GCNGC	5 cut(s)	17, 257, 260, 422, 652
Sau3AI	GATC	6 cut(s)	60, 285, 527, 962, 1079, 1315
Sau96I	GGNCC	5 cut(s)	220, 607, 812, 939, 1331
SchI	GAGTC	2 cut(s)	820, 1259
ScrFI	CCNGG	1 cut(s)	224
SfaNI	GCATC	5 cut(s)	3, 373, 477, 1241, 1406
SfcI	CTRYAG	1 cut(s)	767
SinI	GGWCC	3 cut(s)	607, 939, 1331
SmiMI	CAYNNNNRTG	2 cut(s)	210, 293
SmlI	CTYRAG	2 cut(s)	828, 953
SmoI	CTYRAG	2 cut(s)	828, 953
Sse9I	AATT	7 cut(s)	101, 388, 480, 506, 589, 626, 1062
SsiI	CCGC	4 cut(s)	421, 883, 1011, 1382
SspI	AATATT	1 cut(s)	709
StyD4I	CCNGG	1 cut(s)	222
StyI	CCWWGG	3 cut(s)	458, 786, 1260
TaaI	ACNGT	8 cut(s)	231, 305, 344, 894, 1048, 1228, 1285, 1418
TaiI	ACGT	2 cut(s)	844, 1062
TaqI	TCGA	1 cut(s)	1357
TasI	AATT	7 cut(s)	101, 388, 480, 506, 589, 626, 1062
TatI	WGTACW	1 cut(s)	300
TauI	GCSGC	1 cut(s)	424
TfiI	GAWTC	4 cut(s)	178, 469, 1121, 1389
Tru1I	TTAA	4 cut(s)	191, 510, 954, 986
Tru9I	TTAA	4 cut(s)	191, 510, 954, 986
TscAI	CASTG	4 cut(s)	1053, 1091, 1399, 1423
TseFI	GTSAC	1 cut(s)	42
TseI	GCWGC	4 cut(s)	16, 256, 259, 651
Tsp45I	GTSAC	1 cut(s)	42
TspDTI	ATGAA	8 cut(s)	547, 584, 639, 686, 718, 886, 961, 989
TspRI	CASTG	4 cut(s)	1053, 1091, 1399, 1423
Van91I	CCANNNNNTGG	1 cut(s)	821
Vha464I	CTTAAG	1 cut(s)	953
VpaK11BI	GGWCC	3 cut(s)	607, 939, 1331
XapI	RAATTY	3 cut(s)	101, 388, 626
XceI	RCATGY	2 cut(s)	146, 776
XmiI	GTMKAC	1 cut(s)	428

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.