RLG00000002183

May be involved in modulation of pathogen defense and leaf cell death

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr1
Physical Location & Seq
Reverse (-)
26866273 .. 26872715
6443 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000002183

Sequence Viewer

Length: 1689 bp
ATGGAGGAGGTGATACAGCAACAAAGGTCATTGGCCGAGACACCAACTTATTCAGTTGCTTCAGTTGTTACGGTTATGGTCTTTGTCTGCCTTCTGGTACAAAGGTCAATCTATAGATTTGGAAAGTGGTTAAAGAAGACTAGGAGGAAAGCGCTGTTTGTTTCGTTGGAGAAGATCAAGGAAGAGCTCATGCTACTTGGCCTTATATCTTTGTTGCTGGCGCAATCCGCAAGGTGGATTTCTGAGATATGTGTAAACTCTTCTCTTTTCACCAGCAAATTTTATATCTGTTCTGAGAGAGATTACAGCAACACCAATGAGAAGGTCAAGCTTGAGAGTTCTTTTTCTTCTCCCAATGTGACTGATATTCCAGCAGGATTAATCAATCTTTCTTCTCATCAATGTGGTGAGGGCCATGAACCATTTGTTTCATATGAGGGACTGGAGCAGCTGCACCGGTTCTTGTTTGTTCTTGGGATCACCCATGTCTTGTATAGTTGTGTGGCGGTTGGTTTGGCTATGAGCAAGATATACAGTTGGAGGAAATGGGAAAATCAAGCTGGCCTACTGGCTGATGCGAATTTGCAAGCAAAGAAAAACAAGGTGATGAGACGACAATCTACCTTTGTTTTCCAGCACACATCTCATCCGTGGAGCAGGCACCGGATTCTCATTTGGATGCTTTGCTTTCTACGACAATTTAAGAGTTCCGTACAGAGATCGGATTACTTGGCTTTGCGTTTGGGCTTCATCACTAAGCACAGACTGCCCCATTCTTATAACTTCCATAAATATATGGTCCGGAGTATGGAAGATGAATTTCAAGGGATTCTTGGTATCAGCTGGCCACTTTGGGGTTATGCCATAGTGTGCATTTTCGTAAATGTTCATGGTCTGAATATTTATTTTTGGCTTTCCTTCATCCCTGCCATTCTTGTCATGCTGGTCGGAACAAAGCTCCAGCATGTTGTCTCTTCCTTAGCACTTGAAATTGTAGAACAAACAGGGCCGACTGTTGGGACAGAAGTAAAGCCACGTGACGATTTGTTTTGGTTTGGGAAACCAGTAATACTTCTGCGGTTGATACAATTCATCATATTTCAGAATGCCTTTGAGATGGCAACATTTCTCTGGTCTTTGTGGGGACTTAAGGAGAGATCATGCTTCATGAAAAACCACGTATTGATAGTTATTAGGTTGGCTTCTGGTGTTCTTGTTCAGTTCTGGTGTAGTCACAGCACAGTGCCTCTAAACGTCATTGTTACACAGATGGGATCCCGGTGTAAGAAAGCTCTGGTTGCTGAGAGTGTCAGAGAATCACTCCATAGTTGGTGCAAGAGAGTAAAGCACAGGTCTAAACACTCGCATGCTACAAGATCAGTTTGTTCACTTGACACAACAATTGATGAGAGGGATGAGATAACAGTCGCATCTGGCACTTTATCTCGGAGCTCTTCCTTGGACTCCCTACATCAAGTAACTGTAGCACCAATGGAACAGCCTGACGCTGTTCTTGACACTACAGACCCGCCTCAACATGAATACTCATTCCGGGTAGCAGAGTATTTAGCTGACTCGGTAAGCATCAGTGCATCACAACGTCCTACCACCAGCGAAGAAGATGATGACGGCATTAATGGAGAAGAAGAAAAAGTGGATACTTTATTAGAGTTGTTTCAGAAAACATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

563

Amino Acids

64.24

Weight (kDa)

8.6

Isoelectric Point (pI)

41.73

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Mlo PF03094 8 - 466 3.4e-172 Mlo family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 780
AccB1I GGYRCC 1 cut(s) 660
AccIII TCCGGA 1 cut(s) 801
AciI CCGC 4 cut(s) 228, 506, 1078, 1529
AclWI GGATC 3 cut(s) 485, 1269, 1282
AcoI YGGCCR 2 cut(s) 33, 845
AcsI RAATTY 3 cut(s) 278, 580, 818
AcuI CTGAAG 1 cut(s) 45
AcvI CACGTG 1 cut(s) 1037
AfaI GTAC 2 cut(s) 99, 714
AfeI AGCGCT 1 cut(s) 153
AfiI CCNNNNNNNGG 4 cut(s) 234, 808, 854, 1016
AflII CTTAAG 1 cut(s) 1148
AgeI ACCGGT 1 cut(s) 456
AgsI TTSAA 2 cut(s) 824, 989
AluBI AGCT 9 cut(s) 187, 331, 451, 560, 843, 958, 1292, 1452, 1571
AluI AGCT 9 cut(s) 187, 331, 451, 560, 843, 958, 1292, 1452, 1571
Alw21I GWGCWC 2 cut(s) 189, 1454
Alw26I GTCTC 3 cut(s) 32, 604, 976
AlwI GGATC 3 cut(s) 485, 1269, 1282
Aor13HI TCCGGA 1 cut(s) 801
Aor51HI AGCGCT 1 cut(s) 153
AoxI GGCC 6 cut(s) 33, 199, 412, 562, 845, 1007
ApeKI GCWGC 2 cut(s) 448, 451
ApoI RAATTY 3 cut(s) 278, 580, 818
AseI ATTAAT 2 cut(s) 380, 1635
AsiGI ACCGGT 1 cut(s) 456
AspLEI GCGC 2 cut(s) 154, 223
AspS9I GGNCC 3 cut(s) 412, 799, 1007
AsuC2I CCSGG 2 cut(s) 1279, 1553
AsuHPI GGTGA 5 cut(s) 22, 262, 419, 472, 616
AvaII GGWCC 1 cut(s) 799
BaeI ACNNNNGTAYC 2 cut(s) 89, 122
BalI TGGCCA 1 cut(s) 847
BamHI GGATCC 1 cut(s) 1274
BanI GGYRCC 1 cut(s) 660
BanII GRGCYC 2 cut(s) 189, 1454
BbrPI CACGTG 1 cut(s) 1037
BbsI GAAGAC 1 cut(s) 143
Bbv12I GWGCWC 2 cut(s) 189, 1454
BbvI GCAGC 2 cut(s) 438, 460
BccI CCATC 2 cut(s) 1111, 1264
BceAI ACGGC 1 cut(s) 1645
BciVI GTATCC 1 cut(s) 1651
BcnI CCSGG 2 cut(s) 1279, 1553
BcoDI GTCTC 3 cut(s) 32, 604, 976
BfaI CTAG 1 cut(s) 141
BfmI CTRYAG 3 cut(s) 112, 1482, 1521
BfoI RGCGCY 1 cut(s) 155
BfrI CTTAAG 1 cut(s) 1148
BfuI GTATCC 1 cut(s) 1651
BisI GCNGC 2 cut(s) 449, 452
BlsI GCNGC 2 cut(s) 450, 453
Bme1390I CCNGG 2 cut(s) 1279, 1553
Bme18I GGWCC 1 cut(s) 799
BmgT120I GGNCC 3 cut(s) 412, 799, 1007
BmiI GGNNCC 2 cut(s) 662, 1276
BmrFI CCNGG 2 cut(s) 1279, 1553
BmsI GCATC 5 cut(s) 565, 669, 1439, 1593, 1601
BpiI GAAGAC 1 cut(s) 143
BplI GAGNNNNNCTC 2 cut(s) 1305, 1337
BpmI CTGGAG 2 cut(s) 464, 944
Bpu10I CCTNAGC 1 cut(s) 979
BpuEI CTTGAG 1 cut(s) 353
BpuMI CCSGG 2 cut(s) 1279, 1553
BsaAI YACGTR 2 cut(s) 1037, 1180
BsaJI CCNNGG 2 cut(s) 650, 1458
BsaWI WCCGGW 3 cut(s) 456, 663, 801
Bsc4I CCNNNNNNNGG 4 cut(s) 234, 808, 854, 1016
Bse118I RCCGGY 1 cut(s) 456
Bse1I ACTGG 3 cut(s) 447, 573, 1064
BseAI TCCGGA 1 cut(s) 801
BseDI CCNNGG 2 cut(s) 650, 1458
BseGI GGATG 4 cut(s) 646, 684, 921, 1420
BseLI CCNNNNNNNGG 4 cut(s) 234, 808, 854, 1016
BseMII CTCAG 3 cut(s) 234, 285, 1293
BseNI ACTGG 3 cut(s) 447, 573, 1064
BseRI GAGGAG 1 cut(s) 20
BseXI GCAGC 2 cut(s) 438, 460
BsgI GTGCAG 1 cut(s) 437
BshFI GGCC 6 cut(s) 35, 201, 414, 564, 847, 1009
BshNI GGYRCC 1 cut(s) 660
BshTI ACCGGT 1 cut(s) 456
BsiHKAI GWGCWC 2 cut(s) 189, 1454
BsiSI CCGG 5 cut(s) 457, 664, 802, 1279, 1552
BslFI GGGAC 3 cut(s) 453, 1033, 1158
BslI CCNNNNNNNGG 4 cut(s) 234, 808, 854, 1016
BsmAI GTCTC 3 cut(s) 32, 604, 976
BsmBI CGTCTC 1 cut(s) 604
BsmFI GGGAC 3 cut(s) 453, 1033, 1158
BsmI GAATGC 1 cut(s) 1111
BsnI GGCC 6 cut(s) 35, 201, 414, 564, 847, 1009
Bsp1286I GDGCHC 2 cut(s) 189, 1454
Bsp13I TCCGGA 1 cut(s) 801
Bsp143I GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
BspACI CCGC 4 cut(s) 228, 506, 1078, 1529
BspANI GGCC 6 cut(s) 35, 201, 414, 564, 847, 1009
BspCNI CTCAG 3 cut(s) 235, 286, 1294
BspEI TCCGGA 1 cut(s) 801
BspHI TCATGA 1 cut(s) 1167
BspLI GGNNCC 2 cut(s) 662, 1276
BspPI GGATC 3 cut(s) 485, 1269, 1282
BspQI GCTCTTC 2 cut(s) 177, 1459
BspT107I GGYRCC 1 cut(s) 660
BspTI CTTAAG 1 cut(s) 1148
BsrFI RCCGGY 1 cut(s) 456
BsrI ACTGG 3 cut(s) 447, 573, 1064
BssAI RCCGGY 1 cut(s) 456
BssECI CCNNGG 2 cut(s) 650, 1458
BssMI GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
BssT1I CCWWGG 1 cut(s) 1458
Bst4CI ACNGT 6 cut(s) 73, 536, 1015, 1243, 1426, 1483
Bst6I CTCTTC 4 cut(s) 177, 265, 979, 1459
BstAFI CTTAAG 1 cut(s) 1148
BstAPI GCANNNNNTGC 1 cut(s) 766
BstBAI YACGTR 2 cut(s) 1037, 1180
BstC8I GCNNGC 6 cut(s) 219, 562, 588, 659, 845, 1368
BstDEI CTNAG 5 cut(s) 243, 294, 756, 979, 1302
BstDSI CCRYGG 1 cut(s) 650
BstF5I GGATG 4 cut(s) 646, 684, 921, 1420
BstH2I RGCGCY 1 cut(s) 155
BstHHI GCGC 2 cut(s) 154, 223
BstKTI GATC 6 cut(s) 177, 480, 722, 1160, 1277, 1379
BstMAI GTCTC 3 cut(s) 32, 604, 976
BstMBI GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
BstMWI GCNNNNNNNGC 3 cut(s) 227, 766, 1298
BstNSI RCATGY 2 cut(s) 968, 1370
BstSCI CCNGG 2 cut(s) 1277, 1551
BstSFI CTRYAG 3 cut(s) 112, 1482, 1521
BstV1I GCAGC 2 cut(s) 438, 460
BstV2I GAAGAC 1 cut(s) 143
BstX2I RGATCY 1 cut(s) 1274
BstYI RGATCY 1 cut(s) 1274
BsuI GTATCC 1 cut(s) 1651
BsuRI GGCC 6 cut(s) 35, 201, 414, 564, 847, 1009
BtgI CCRYGG 1 cut(s) 650
BtsCI GGATG 4 cut(s) 646, 684, 921, 1420
BtsIMutI CAGTG 2 cut(s) 1248, 1594
Cac8I GCNNGC 6 cut(s) 219, 562, 588, 659, 845, 1368
CciI TCATGA 1 cut(s) 1167
CfoI GCGC 2 cut(s) 154, 223
Cfr10I RCCGGY 1 cut(s) 456
Cfr13I GGNCC 3 cut(s) 412, 799, 1007
CseI GACGC 1 cut(s) 1514
Csp6I GTAC 2 cut(s) 98, 713
CspAI ACCGGT 1 cut(s) 456
CviQI GTAC 2 cut(s) 98, 713
DdeI CTNAG 5 cut(s) 243, 294, 756, 979, 1302
DpnI GATC 6 cut(s) 176, 479, 721, 1159, 1276, 1378
DpnII GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
EaeI YGGCCR 2 cut(s) 33, 845
Eam1104I CTCTTC 4 cut(s) 177, 265, 979, 1459
EarI CTCTTC 4 cut(s) 177, 265, 979, 1459
Ecl136II GAGCTC 2 cut(s) 187, 1452
Eco130I CCWWGG 1 cut(s) 1458
Eco24I GRGCYC 2 cut(s) 189, 1454
Eco47I GGWCC 1 cut(s) 799
Eco47III AGCGCT 1 cut(s) 153
Eco53kI GAGCTC 2 cut(s) 187, 1452
Eco57I CTGAAG 1 cut(s) 45
Eco72I CACGTG 1 cut(s) 1037
EcoICRI GAGCTC 2 cut(s) 187, 1452
EcoT14I CCWWGG 1 cut(s) 1458
EcoT38I GRGCYC 2 cut(s) 189, 1454
ErhI CCWWGG 1 cut(s) 1458
Esp3I CGTCTC 1 cut(s) 604
FalI AAGNNNNNCTT 2 cut(s) 816, 848
FaqI GGGAC 3 cut(s) 453, 1033, 1158
FauI CCCGC 1 cut(s) 1536
FauNDI CATATG 1 cut(s) 433
Fnu4HI GCNGC 2 cut(s) 449, 452
FokI GGATG 4 cut(s) 633, 691, 908, 1427
FriOI GRGCYC 2 cut(s) 189, 1454
Fsp4HI GCNGC 2 cut(s) 449, 452
FspBI CTAG 1 cut(s) 141
GlaI GCGC 2 cut(s) 153, 222
GluI GCNGC 2 cut(s) 449, 452
GsuI CTGGAG 2 cut(s) 464, 944
HaeII RGCGCY 1 cut(s) 155
HaeIII GGCC 6 cut(s) 35, 201, 414, 564, 847, 1009
HapII CCGG 5 cut(s) 457, 664, 802, 1279, 1552
HgaI GACGC 1 cut(s) 1514
HhaI GCGC 2 cut(s) 154, 223
Hin6I GCGC 2 cut(s) 152, 221
HinP1I GCGC 2 cut(s) 152, 221
HindIII AAGCTT 1 cut(s) 329
HinfI GANTC 5 cut(s) 667, 829, 1316, 1463, 1574
HpaII CCGG 5 cut(s) 457, 664, 802, 1279, 1552
HphI GGTGA 5 cut(s) 22, 262, 419, 472, 616
Hpy166II GTNNAC 2 cut(s) 256, 1388
Hpy188I TCNGA 9 cut(s) 244, 295, 724, 897, 950, 1104, 1313, 1449, 1680
Hpy188III TCNNGA 3 cut(s) 802, 1168, 1514
Hpy8I GTNNAC 2 cut(s) 256, 1388
HpyAV CCTTC 3 cut(s) 101, 316, 928
HpyCH4III ACNGT 6 cut(s) 73, 536, 1015, 1243, 1426, 1483
HpyCH4IV ACGT 4 cut(s) 1036, 1179, 1254, 1600
HpyCH4V TGCA 5 cut(s) 454, 586, 873, 1335, 1592
HpyF10VI GCNNNNNNNGC 3 cut(s) 227, 766, 1298
HpyF3I CTNAG 5 cut(s) 243, 294, 756, 979, 1302
HpySE526I ACGT 4 cut(s) 1036, 1179, 1254, 1600
HspAI GCGC 2 cut(s) 152, 221
Kpn2I TCCGGA 1 cut(s) 801
Kzo9I GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
LguI GCTCTTC 2 cut(s) 177, 1459
LmnI GCTCC 4 cut(s) 445, 654, 963, 1449
Lsp1109I GCAGC 2 cut(s) 438, 460
LweI GCATC 5 cut(s) 565, 669, 1439, 1593, 1601
MaeI CTAG 1 cut(s) 141
MaeII ACGT 4 cut(s) 1036, 1179, 1254, 1600
MaeIII GTNAC 6 cut(s) 67, 358, 1037, 1232, 1261, 1477
MalI GATC 6 cut(s) 176, 479, 721, 1159, 1276, 1378
MboI GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
MfeI CAATTG 1 cut(s) 1401
MflI RGATCY 1 cut(s) 1274
MhlI GDGCHC 2 cut(s) 189, 1454
MlsI TGGCCA 1 cut(s) 847
MluCI AATT 7 cut(s) 278, 580, 698, 818, 990, 1088, 1401
MluNI TGGCCA 1 cut(s) 847
MlyI GAGTC 2 cut(s) 1457, 1568
MmeI TCCRAC 3 cut(s) 147, 518, 928
MnlI CCTC 7 cut(s) 138, 403, 430, 534, 1257, 1404, 1542
Mox20I TGGCCA 1 cut(s) 847
MroI TCCGGA 1 cut(s) 801
MscI TGGCCA 1 cut(s) 847
MseI TTAA 5 cut(s) 131, 380, 702, 1149, 1635
MslI CAYNNNNRTG 3 cut(s) 402, 677, 1365
Msp20I TGGCCA 1 cut(s) 847
MspA1I CMGCKG 2 cut(s) 451, 843
MspCI CTTAAG 1 cut(s) 1148
MspI CCGG 5 cut(s) 457, 664, 802, 1279, 1552
MspR9I CCNGG 2 cut(s) 1279, 1553
MunI CAATTG 1 cut(s) 1401
Mva1269I GAATGC 1 cut(s) 1111
MwoI GCNNNNNNNGC 3 cut(s) 227, 766, 1298
NciI CCSGG 2 cut(s) 1279, 1553
NdeI CATATG 1 cut(s) 433
NdeII GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
NlaIV GGNNCC 2 cut(s) 662, 1276
NmeAIII GCCGAG 1 cut(s) 61
NmuCI GTSAC 3 cut(s) 358, 1037, 1232
NspI RCATGY 2 cut(s) 968, 1370
PaeI GCATGC 1 cut(s) 1370
PagI TCATGA 1 cut(s) 1167
PciSI GCTCTTC 2 cut(s) 177, 1459
PctI GAATGC 1 cut(s) 1111
PfeI GAWTC 3 cut(s) 667, 829, 1316
PinAI ACCGGT 1 cut(s) 456
PkrI GCNGC 2 cut(s) 450, 453
PleI GAGTC 2 cut(s) 1457, 1568
PmaCI CACGTG 1 cut(s) 1037
PmlI CACGTG 1 cut(s) 1037
PpsI GAGTC 2 cut(s) 1457, 1568
Ppu21I YACGTR 2 cut(s) 1037, 1180
PshBI ATTAAT 2 cut(s) 380, 1635
PsiI TTATAA 1 cut(s) 780
Psp124BI GAGCTC 2 cut(s) 189, 1454
PspCI CACGTG 1 cut(s) 1037
PspN4I GGNNCC 2 cut(s) 662, 1276
PspPI GGNCC 3 cut(s) 412, 799, 1007
PsuI RGATCY 1 cut(s) 1274
PvuII CAGCTG 2 cut(s) 451, 843
RsaI GTAC 2 cut(s) 99, 714
RsaNI GTAC 2 cut(s) 98, 713
RseI CAYNNNNRTG 3 cut(s) 402, 677, 1365
SacI GAGCTC 2 cut(s) 189, 1454
SapI GCTCTTC 2 cut(s) 177, 1459
SaqAI TTAA 5 cut(s) 131, 380, 702, 1149, 1635
SatI GCNGC 2 cut(s) 449, 452
Sau3AI GATC 6 cut(s) 174, 477, 719, 1157, 1274, 1376
Sau96I GGNCC 3 cut(s) 412, 799, 1007
SchI GAGTC 2 cut(s) 1457, 1568
ScrFI CCNGG 2 cut(s) 1279, 1553
SduI GDGCHC 2 cut(s) 189, 1454
SfaNI GCATC 5 cut(s) 565, 669, 1439, 1593, 1601
SfcI CTRYAG 3 cut(s) 112, 1482, 1521
SinI GGWCC 1 cut(s) 799
SmiMI CAYNNNNRTG 3 cut(s) 402, 677, 1365
SmlI CTYRAG 2 cut(s) 332, 1148
SmoI CTYRAG 2 cut(s) 332, 1148
SphI GCATGC 1 cut(s) 1370
Sse9I AATT 7 cut(s) 278, 580, 698, 818, 990, 1088, 1401
SsiI CCGC 4 cut(s) 228, 506, 1078, 1529
SspI AATATT 1 cut(s) 901
SspMI CTAG 1 cut(s) 141
SstI GAGCTC 2 cut(s) 189, 1454
StyD4I CCNGG 2 cut(s) 1277, 1551
StyI CCWWGG 1 cut(s) 1458
TaaI ACNGT 6 cut(s) 73, 536, 1015, 1243, 1426, 1483
TaiI ACGT 4 cut(s) 1039, 1182, 1257, 1603
TasI AATT 7 cut(s) 278, 580, 698, 818, 990, 1088, 1401
TfiI GAWTC 3 cut(s) 667, 829, 1316
Tru1I TTAA 5 cut(s) 131, 380, 702, 1149, 1635
Tru9I TTAA 5 cut(s) 131, 380, 702, 1149, 1635
TscAI CASTG 2 cut(s) 1248, 1594
TseFI GTSAC 3 cut(s) 358, 1037, 1232
TseI GCWGC 2 cut(s) 448, 451
Tsp45I GTSAC 3 cut(s) 358, 1037, 1232
TspGWI ACGGA 2 cut(s) 639, 700
TspRI CASTG 2 cut(s) 1248, 1594
Vha464I CTTAAG 1 cut(s) 1148
VpaK11BI GGWCC 1 cut(s) 799
VspI ATTAAT 2 cut(s) 380, 1635
XapI RAATTY 3 cut(s) 278, 580, 818
XceI RCATGY 2 cut(s) 968, 1370
XspI CTAG 1 cut(s) 141
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.