pycom09g01480
ERF Family

Belongs to the class I-like SAM-binding methyltransferase superfamily. Cation-independent O- methyltransferase family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Forward (+)
1184221 .. 1184966
746 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g01480.2

Sequence Viewer

Length: 564 bp
ATGGCCTGTACTTCTAGGGTTGTGACAAAGGCAATACTCACAGGTTATGAACATGGGTTTGATGGTGTGGGATCGATAGTGGATGTAGGTGGTGGGACTGGAAGTGCGGTGGCTGAGATTGTCAAGGCCTATCCCAACATCAAGGGTTTCAATTTTGATCTGCCCCATGTCGTAGCCACAGCACCAGTGTACCATGGCGTGTCACATGTAGCTGGTGATATGTTTGAGGGCAATATTCCAAATGCGGATGTAGTTTTCATGAAGCATATTATGCACGATTGGAGTGACAGTGATTGCATCAAGATTTTGAAGAACTGCCGAAAAGCAATACCAGAGAAAAGTGGGAAGATCATTATTGTTGATGTAGTTCTAGAGCCAAATGGTGAAGGGACTCTGAATGACACACGATTGATCATTGATTTAGTGATGATTGCACACGTGTCAGGTGGAAGGGAGAGAACTGAGAATGAATGGAAGAAGTTATTGGAAGAAGGAGGCTTCCCTCGCCACAAAGTCATCAAAATTCCAGCTTTAGCATCCATTGTTGAGGCCTACCCTATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

188

Amino Acids

20.25

Weight (kDa)

6.05

Isoelectric Point (pI)

27.15

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018905)

Species Orthologous Gene IDs
malus_domestica MD17G1079300.v1.1 MD17G1079400.v1.1
pyrus_communis pycom09g01480
rosa_chinensis RchiOBHm_Chr2g0162441
rosa_multiflora Rmu_co8443219.1_g000001
rosa_roxburghii Rroxscaffold_2G00087920
rosa_samantha Rh2AG405000 Rh2AG563600 Rh2BG576400

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 2 cut(s) 107, 245
AclWI GGATC 1 cut(s) 79
AcsI RAATTY 1 cut(s) 522
AcvI CACGTG 1 cut(s) 439
AfaI GTAC 2 cut(s) 10, 191
AflIII ACRYGT 3 cut(s) 205, 436, 438
AgsI TTSAA 2 cut(s) 151, 310
AjuI GAANNNNNNNTTGG 2 cut(s) 467, 499
AluBI AGCT 2 cut(s) 212, 530
AluI AGCT 2 cut(s) 212, 530
AlwI GGATC 1 cut(s) 79
AoxI GGCC 3 cut(s) 3, 126, 549
ApoI RAATTY 1 cut(s) 522
AsuHPI GGTGA 2 cut(s) 227, 395
BaeI ACNNNNGTAYC 2 cut(s) 173, 206
BbrPI CACGTG 1 cut(s) 439
BccI CCATC 1 cut(s) 56
BclI TGATCA 1 cut(s) 411
BfaI CTAG 2 cut(s) 15, 371
BmsI GCATC 2 cut(s) 306, 545
Bsa29I ATCGAT 1 cut(s) 74
BsaAI YACGTR 1 cut(s) 439
BsaJI CCNNGG 1 cut(s) 193
BsaXI ACNNNNNCTCC 2 cut(s) 274, 304
Bse1I ACTGG 2 cut(s) 103, 185
BseCI ATCGAT 1 cut(s) 74
BseDI CCNNGG 1 cut(s) 193
BseGI GGATG 3 cut(s) 88, 253, 536
BseMII CTCAG 2 cut(s) 105, 453
BseNI ACTGG 2 cut(s) 103, 185
BshFI GGCC 3 cut(s) 5, 128, 551
BshVI ATCGAT 1 cut(s) 74
BslFI GGGAC 2 cut(s) 109, 403
BsmFI GGGAC 2 cut(s) 109, 403
BsnI GGCC 3 cut(s) 5, 128, 551
Bsp143I GATC 4 cut(s) 71, 157, 348, 411
Bsp19I CCATGG 1 cut(s) 193
BspACI CCGC 2 cut(s) 107, 245
BspANI GGCC 3 cut(s) 5, 128, 551
BspCNI CTCAG 2 cut(s) 106, 454
BspDI ATCGAT 1 cut(s) 74
BspHI TCATGA 1 cut(s) 258
BspPI GGATC 1 cut(s) 79
BsrI ACTGG 2 cut(s) 103, 185
BssECI CCNNGG 1 cut(s) 193
BssMI GATC 4 cut(s) 71, 157, 348, 411
BssT1I CCWWGG 1 cut(s) 193
Bst4CI ACNGT 1 cut(s) 290
BstAPI GCANNNNNTGC 1 cut(s) 271
BstBAI YACGTR 1 cut(s) 439
BstDEI CTNAG 2 cut(s) 114, 462
BstDSI CCRYGG 1 cut(s) 193
BstF5I GGATG 3 cut(s) 88, 253, 536
BstKTI GATC 4 cut(s) 74, 160, 351, 414
BstMBI GATC 4 cut(s) 71, 157, 348, 411
BstMWI GCNNNNNNNGC 2 cut(s) 271, 504
BstNSI RCATGY 1 cut(s) 209
Bsu15I ATCGAT 1 cut(s) 74
BsuRI GGCC 3 cut(s) 5, 128, 551
BsuTUI ATCGAT 1 cut(s) 74
BtgI CCRYGG 1 cut(s) 193
BtsCI GGATG 3 cut(s) 88, 253, 536
BtsIMutI CAGTG 2 cut(s) 192, 295
CciI TCATGA 1 cut(s) 258
ClaI ATCGAT 1 cut(s) 74
Csp6I GTAC 2 cut(s) 9, 190
CviAII CATG 5 cut(s) 53, 167, 194, 206, 259
CviJI RGCY 9 cut(s) 5, 113, 128, 176, 212, 376, 498, 530, 551
CviKI_1 RGCY 9 cut(s) 5, 113, 128, 176, 212, 376, 498, 530, 551
CviQI GTAC 2 cut(s) 9, 190
DdeI CTNAG 2 cut(s) 114, 462
DpnI GATC 4 cut(s) 73, 159, 350, 413
DpnII GATC 4 cut(s) 71, 157, 348, 411
Eco130I CCWWGG 1 cut(s) 193
Eco147I AGGCCT 2 cut(s) 128, 551
Eco72I CACGTG 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 193
ErhI CCWWGG 1 cut(s) 193
FaeI CATG 5 cut(s) 56, 170, 197, 209, 262
FaqI GGGAC 2 cut(s) 109, 403
FatI CATG 5 cut(s) 52, 166, 193, 205, 258
FbaI TGATCA 1 cut(s) 411
FokI GGATG 3 cut(s) 95, 260, 523
FspBI CTAG 2 cut(s) 15, 371
HaeIII GGCC 3 cut(s) 5, 128, 551
Hin1II CATG 5 cut(s) 56, 170, 197, 209, 262
HinfI GANTC 1 cut(s) 391
HphI GGTGA 2 cut(s) 227, 395
Hpy166II GTNNAC 1 cut(s) 190
Hpy188I TCNGA 1 cut(s) 396
Hpy188III TCNNGA 3 cut(s) 259, 301, 371
Hpy8I GTNNAC 1 cut(s) 190
HpyAV CCTTC 3 cut(s) 380, 444, 485
HpyCH4III ACNGT 1 cut(s) 290
HpyCH4IV ACGT 1 cut(s) 438
HpyCH4V TGCA 3 cut(s) 274, 297, 434
HpyF10VI GCNNNNNNNGC 2 cut(s) 271, 504
HpyF3I CTNAG 2 cut(s) 114, 462
HpySE526I ACGT 1 cut(s) 438
Hsp92II CATG 5 cut(s) 56, 170, 197, 209, 262
Ksp22I TGATCA 1 cut(s) 411
Kzo9I GATC 4 cut(s) 71, 157, 348, 411
LpnPI CCDG 8 cut(s) 19, 27, 84, 198, 198, 345, 429, 540
LweI GCATC 2 cut(s) 306, 545
MaeI CTAG 2 cut(s) 15, 371
MaeII ACGT 1 cut(s) 438
MaeIII GTNAC 3 cut(s) 22, 201, 284
MalI GATC 4 cut(s) 73, 159, 350, 413
MboI GATC 4 cut(s) 71, 157, 348, 411
MboII GAAGA 4 cut(s) 322, 358, 487, 500
MluCI AATT 2 cut(s) 151, 522
MlyI GAGTC 1 cut(s) 385
MnlI CCTC 4 cut(s) 220, 488, 513, 541
MwoI GCNNNNNNNGC 2 cut(s) 271, 504
NcoI CCATGG 1 cut(s) 193
NdeII GATC 4 cut(s) 71, 157, 348, 411
NlaIII CATG 5 cut(s) 56, 170, 197, 209, 262
NmuCI GTSAC 3 cut(s) 22, 201, 284
NspI RCATGY 1 cut(s) 209
PagI TCATGA 1 cut(s) 258
PceI AGGCCT 2 cut(s) 128, 551
PciI ACATGT 1 cut(s) 205
PleI GAGTC 1 cut(s) 385
PmaCI CACGTG 1 cut(s) 439
PmlI CACGTG 1 cut(s) 439
PpsI GAGTC 1 cut(s) 385
Ppu21I YACGTR 1 cut(s) 439
PscI ACATGT 1 cut(s) 205
PspCI CACGTG 1 cut(s) 439
RsaI GTAC 2 cut(s) 10, 191
RsaNI GTAC 2 cut(s) 9, 190
Sau3AI GATC 4 cut(s) 71, 157, 348, 411
SchI GAGTC 1 cut(s) 385
SetI ASST 6 cut(s) 46, 91, 214, 441, 448, 532
SfaNI GCATC 2 cut(s) 306, 545
Sse9I AATT 2 cut(s) 151, 522
SseBI AGGCCT 2 cut(s) 128, 551
SsiI CCGC 2 cut(s) 107, 245
SspI AATATT 1 cut(s) 235
SspMI CTAG 2 cut(s) 15, 371
StuI AGGCCT 2 cut(s) 128, 551
StyI CCWWGG 1 cut(s) 193
TaaI ACNGT 1 cut(s) 290
TaiI ACGT 1 cut(s) 441
TaqI TCGA 1 cut(s) 74
TasI AATT 2 cut(s) 151, 522
TatI WGTACW 1 cut(s) 8
TscAI CASTG 2 cut(s) 192, 295
TseFI GTSAC 3 cut(s) 22, 201, 284
Tsp45I GTSAC 3 cut(s) 22, 201, 284
TspDTI ATGAA 4 cut(s) 63, 247, 275, 483
TspRI CASTG 2 cut(s) 192, 295
XapI RAATTY 1 cut(s) 522
XbaI TCTAGA 1 cut(s) 370
XceI RCATGY 1 cut(s) 209
XspI CTAG 2 cut(s) 15, 371
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.