pycom09g05070

Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0013571
Physical Location & Seq
Reverse (-)
3775441 .. 3778847
3407 bp
Loading structure...
UTR
Exon/CDS
Intron
N/A

Sequence Viewer

Length: 2328 bp
ATGAGATGGACAGTGATCGAGCGGAAGGGAAGAAGAAAATTATGGGGCTTATTGGTTTGCCATCACACAAGCCCTAGATTTGTTCCTTTCCCCTTAAGATATGCCTGTGAGTTCTTGATACAAGTTTTTGGTGTACAGATCAGCAAAGAAGTGGAGCTGGCTGCTCAGTCGAGGGAGAAACATATATTAAAAATACAGACTCTGCTCTGTGACATGCTTATGAGGGATTCCCCTGTAGGGATTGTTACTCAATCGCCTAATGTGATGGACCTTGTTAAGTGTGATGGAGCTGCATTATATTACAGGAAGAAATTATGGTTGCTTGGGGTTACCCCGACAGAGGCACAAATTGAGGATATTGCTGAATGGCTTCTCAAGTACCATAGTGGGAGCACAGGCTTAACTACTGATAGCCTTATGGAGGCTGGTTATCTAGGTGCTTCAGCCCTTGGCGATGAAGTTTGCGGAATGGCTGCTATTAAGATTACCTCAAAGGATTTCCTTTTTTGGTTTCGGTCCCACACCGCAAAGGAAATCAAATGGTGTGGAGCAAAACATGATCCTGATGACAAGGACGATGGAAGAAAAATGCATCCAAGGTCATCATTCAAGGCTTTCCTGGAGGTGGTTAAGCGACGAAGCGTGCCTTGGGAAGATATTGAAATGGATGTCATCCATTCTTTACAGCTAATACTGAGAGGATCATTACCAGACGAGCCTGTGGATGATTCCAAAGTGATTGTGAAGGCTCCATCAGTTGATGATAGGATACAGAGAGTGGATGAACTTCGCATTGTCACAAATGAAATGGTTCGACTTATTGAGACAGCTGTAGTTCCCATTTTTGCTGTTGACGCGTCCGGTACTATAAATGGGTGGAATACAAAAGCATCTGAGCTAACAGGATTAGCTGTTGAGCAAGCTATTGGTATGCCGTTAGTTGATATTGTTGGAGATGATTCAATTGAAGTGGTGAAGGACATGCTCTCATTCGCATTGCAAGGTGTGGAGAAGAAAAATGTTGAAATCAAACTGAAAACATTTGGCCATCAAGAAAGTAACAGTTTTGTAATCTTGGTGGTCAATTCATGTTGTAGCCGAGATATAAAGGAAGATGTAGTTGGGGTTTGCTTTGTAAGCCAAGATCTTACCAAAGAAAAACTGGGTATGGACAAGTATACCCGTTTGCTAGGTGATTATGTTGGGATTGTTCGGAGCCCATCTGCACTGATTCCTCCTATATTTATGACTGATGAGAATTTTCGTTGCTTGGAGTGGAATGACGCTATGCAAAAATTGTCTGGCTTGAGAAGGGAAGAAGCGGTTGATCGGATGCTCATTGGGGAAGTTTTCACTGTGAAAAATTTTGGTTGTCGTGTTAAAGGTCATGACACATTAACCAAGCTTAGCATTCTACTAAATGGGGTAATAACAGGCGAGAATGTTAGTAAATTGCATTTTGGGTTTTACGATCAGCAGGGTAATTATGTTGAAGCATTACTTTCTGCCAACAAACGAATTGATGCATTGGGAAAGATAACTGGGGTTTTGTTCTTTTTACATGTGGCTAGTCCAGAGCTTATGTATGCTATGCAGATGCAGAGAGCATCAGAGCAGGCTGCAGCTGATAGTATTAAGAAACTGGCGTACGTTCGTCAAGAAATCAAAAAGCCTCTAAGTGGGATTATGCTTATGCATAATCTGATGGGGTCTTCTGATTTAAATGAAGAGCAGAAGCAGTTACTTAGGAAGAGAAGATTGTGTCAGGACCAATTGGCCAAGATTGTTGATGACACTGATCTCGAAAGTATCGAGGAATGCTACATGGAATTAAATTCTAGTGAATTTAACCTTGGGGAAACTGTGGAGGTTGTCATATATCAAGCTATGGTTTTGAGTCAGGAGCGGCAAGTGAAGGTCATCCATGACTCACCAGCCGAGGTGTCATCCATGCTCTTGTATGGAGACAATTTGAGGCTACAACAAATTCTGTCTGATTTCTTGACAAACACACTCCTTTTCACCCCTGCATCCGAAGGATCGTCCATTGTGCTCAGAGTAACCCCAAAGAAGGAACGTATAGGCATGAAAATGCACATTGTTCATCTTGAGTTCTGTCTCACTCATCCAGCACCAGGAATTCCAGACGATCTAATTCAAGAGATGTTTCACAACAGCCATCGAGTCTCAAAGGAAGGGTTAGGCCTACAAATGAGCAAGAATCTGGTGAAGATCATGAACGGCACTGTACGTTATCAGAGAGAAGCAGAGAGAGCAGCCTTTATAATACTCATAGAATTTCCGCTGGTTCACCAGATTAGCAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko04712 map04712
Pfam Domains
Protein Families
GAF HATPase_c HisKA PAS PAS_2 PHY

Protein Analysis

776

Amino Acids

87.42

Weight (kDa)

6.11

Isoelectric Point (pI)

46.47

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PHY PF00360 64 - 235 2.2e-54 Phytochrome region
PAS PF00989 269 - 382 6.3e-20 PAS fold
PAS PF00989 400 - 521 6.4e-14 PAS fold
HisKA PF00512 548 - 606 8.1e-09 His Kinase A (phospho-acceptor) domain
HATPase_c PF02518 655 - 769 9.8e-12 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0013571)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G35840
fragaria_vesca FvH4_6g40650 FvH4_6g40650 FvH4_6g40650
malus_domestica MD09G1126400.v1.1
prunus_persica Prupe.3G198200_v2.0.a1 Prupe.3G198200_v2.0.a1
pyrus_communis pycom09g05070 pycom17g10740
rosa_chinensis RchiOBHm_Chr2g0156021
rosa_laevigata RLG00000020882
rosa_multiflora Rmu_sc0011922.1_g000002
rosa_rugosa Rorug02G0451300
rosa_samantha Rh2AG518100 Rh2BG529300 Rh2CG502800 Rh2DG538400
rosa_wichuraiana Rw2G042660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2285
AccBSI CCGCTC 2 cut(s) 22, 1906
AccI GTMKAC 1 cut(s) 1178
AccII CGCG 1 cut(s) 857
AciI CCGC 6 cut(s) 22, 465, 525, 1322, 1906, 2303
AclWI GGATC 3 cut(s) 554, 709, 2047
AcoI YGGCCR 2 cut(s) 1045, 1776
AcsI RAATTY 7 cut(s) 1258, 1363, 1834, 1844, 1986, 2139, 2297
AcuI CTGAAG 1 cut(s) 426
AfaI GTAC 5 cut(s) 135, 380, 865, 1649, 2250
AfiI CCNNNNNNNGG 7 cut(s) 237, 340, 421, 625, 1679, 2071, 2135
AflII CTTAAG 1 cut(s) 94
AflIII ACRYGT 2 cut(s) 855, 1561
AgsI TTSAA 7 cut(s) 610, 662, 963, 968, 1025, 1493, 2159
AjnI CCWGG 2 cut(s) 618, 2134
AjuI GAANNNNNNNTTGG 6 cut(s) 631, 663, 1104, 1136, 1836, 1868
Alw21I GWGCWC 2 cut(s) 395, 2055
Alw26I GTCTC 4 cut(s) 818, 1959, 2123, 2191
AlwI GGATC 3 cut(s) 554, 709, 2047
AlwNI CAGNNNCTG 1 cut(s) 202
AoxI GGCC 3 cut(s) 1045, 1776, 2203
ApeKI GCWGC 6 cut(s) 161, 290, 473, 1619, 1622, 2276
ApoI RAATTY 7 cut(s) 1258, 1363, 1834, 1844, 1986, 2139, 2297
Asp700I GAANNNNTTC 2 cut(s) 369, 810
AspS9I GGNCC 3 cut(s) 268, 516, 1768
AsuHPI GGTGA 6 cut(s) 985, 1205, 1923, 2014, 2239, 2303
AvaII GGWCC 3 cut(s) 268, 516, 1768
BalI TGGCCA 2 cut(s) 1047, 1778
BanII GRGCYC 1 cut(s) 1220
BbsI GAAGAC 1 cut(s) 1704
Bbv12I GWGCWC 2 cut(s) 395, 2055
BbvI GCAGC 6 cut(s) 148, 277, 460, 1606, 1634, 2288
BccI CCATC 9 cut(s) 69, 259, 278, 572, 760, 1056, 1228, 1699, 2187
BceAI ACGGC 2 cut(s) 919, 2257
BciT130I CCWGG 2 cut(s) 620, 2136
BciVI GTATCC 1 cut(s) 762
BcoDI GTCTC 4 cut(s) 818, 1959, 2123, 2191
BfaI CTAG 5 cut(s) 75, 434, 1190, 1569, 1839
BfmI CTRYAG 3 cut(s) 234, 831, 1620
BfrI CTTAAG 1 cut(s) 94
BfuI GTATCC 1 cut(s) 762
BglII AGATCT 1 cut(s) 1144
BisI GCNGC 7 cut(s) 162, 291, 474, 1620, 1623, 1907, 2277
BlpI GCTNAGC 1 cut(s) 1406
BlsI GCNGC 7 cut(s) 163, 292, 475, 1621, 1624, 1908, 2278
Bme1390I CCNGG 2 cut(s) 620, 2136
Bme18I GGWCC 3 cut(s) 268, 516, 1768
BmgT120I GGNCC 3 cut(s) 268, 516, 1768
BmiI GGNNCC 3 cut(s) 518, 750, 1217
BmrFI CCNGG 2 cut(s) 620, 2136
BmrI ACTGGG 2 cut(s) 1172, 1551
BmsI GCATC 7 cut(s) 601, 899, 1323, 1513, 1587, 1616, 2039
BmuI ACTGGG 2 cut(s) 1172, 1551
BpiI GAAGAC 1 cut(s) 1704
BpmI CTGGAG 1 cut(s) 641
Bpu1102I GCTNAGC 1 cut(s) 1406
BpuEI CTTGAG 3 cut(s) 359, 1327, 2129
BsaJI CCNNGG 5 cut(s) 448, 596, 647, 1852, 1938
BsaWI WCCGGW 1 cut(s) 860
Bsc4I CCNNNNNNNGG 7 cut(s) 237, 340, 421, 625, 1679, 2071, 2135
Bse1I ACTGG 3 cut(s) 1167, 1546, 1647
Bse3DI GCAATG 1 cut(s) 995
BseBI CCWGG 2 cut(s) 620, 2136
BseDI CCNNGG 5 cut(s) 448, 596, 647, 1852, 1938
BseLI CCNNNNNNNGG 7 cut(s) 237, 340, 421, 625, 1679, 2071, 2135
BseMI GCAATG 1 cut(s) 995
BseMII CTCAG 4 cut(s) 179, 686, 885, 2068
BseNI ACTGG 3 cut(s) 1167, 1546, 1647
BseXI GCAGC 6 cut(s) 148, 277, 460, 1606, 1634, 2288
BsgI GTGCAG 1 cut(s) 1209
Bsh1236I CGCG 1 cut(s) 857
BshFI GGCC 3 cut(s) 1047, 1778, 2205
BsiHKAI GWGCWC 2 cut(s) 395, 2055
BsiSI CCGG 1 cut(s) 861
BsiWI CGTACG 1 cut(s) 1647
BslFI GGGAC 1 cut(s) 502
BslI CCNNNNNNNGG 7 cut(s) 237, 340, 421, 625, 1679, 2071, 2135
BsmAI GTCTC 4 cut(s) 818, 1959, 2123, 2191
BsmFI GGGAC 1 cut(s) 502
BsmI GAATGC 2 cut(s) 1410, 1823
BsnI GGCC 3 cut(s) 1047, 1778, 2205
Bsp1286I GDGCHC 3 cut(s) 395, 1220, 2055
Bsp1407I TGTACA 1 cut(s) 133
Bsp1720I GCTNAGC 1 cut(s) 1406
BspACI CCGC 6 cut(s) 22, 465, 525, 1322, 1906, 2303
BspANI GGCC 3 cut(s) 1047, 1778, 2205
BspCNI CTCAG 4 cut(s) 178, 687, 886, 2067
BspFNI CGCG 1 cut(s) 857
BspHI TCATGA 2 cut(s) 1387, 2235
BspLI GGNNCC 3 cut(s) 518, 750, 1217
BspMAI CTGCAG 1 cut(s) 1624
BspPI GGATC 3 cut(s) 554, 709, 2047
BspQI GCTCTTC 1 cut(s) 1722
BspTI CTTAAG 1 cut(s) 94
BsrBI CCGCTC 2 cut(s) 22, 1906
BsrDI GCAATG 1 cut(s) 995
BsrGI TGTACA 1 cut(s) 133
BsrI ACTGG 3 cut(s) 1167, 1546, 1647
BssECI CCNNGG 5 cut(s) 448, 596, 647, 1852, 1938
BssNAI GTATAC 1 cut(s) 1179
BssT1I CCWWGG 4 cut(s) 448, 596, 647, 1852
Bst1107I GTATAC 1 cut(s) 1179
Bst2UI CCWGG 2 cut(s) 620, 2136
Bst4CI ACNGT 5 cut(s) 13, 1064, 1357, 1864, 2248
Bst6I CTCTTC 2 cut(s) 1722, 1745
BstAFI CTTAAG 1 cut(s) 94
BstAUI TGTACA 1 cut(s) 133
BstC8I GCNNGC 4 cut(s) 159, 644, 921, 1617
BstDEI CTNAG 7 cut(s) 165, 695, 894, 1406, 1676, 1745, 2054
BstEII GGTNACC 1 cut(s) 328
BstENI CCTNNNNNAGG 1 cut(s) 419
BstFNI CGCG 1 cut(s) 857
BstMAI GTCTC 4 cut(s) 818, 1959, 2123, 2191
BstMWI GCNNNNNNNGC 3 cut(s) 854, 1137, 2273
BstNI CCWGG 2 cut(s) 620, 2136
BstNSI RCATGY 3 cut(s) 217, 985, 1565
BstPI GGTNACC 1 cut(s) 328
BstSCI CCNGG 2 cut(s) 618, 2134
BstSFI CTRYAG 3 cut(s) 234, 831, 1620
BstUI CGCG 1 cut(s) 857
BstV1I GCAGC 6 cut(s) 148, 277, 460, 1606, 1634, 2288
BstV2I GAAGAC 1 cut(s) 1704
BstX2I RGATCY 1 cut(s) 1144
BstYI RGATCY 1 cut(s) 1144
BstZ17I GTATAC 1 cut(s) 1179
BsuI GTATCC 1 cut(s) 762
BsuRI GGCC 3 cut(s) 1047, 1778, 2205
BtgZI GCGATG 1 cut(s) 468
BtsIMutI CAGTG 5 cut(s) 18, 1226, 1353, 1794, 2244
Cac8I GCNNGC 4 cut(s) 159, 644, 921, 1617
CaiI CAGNNNCTG 1 cut(s) 202
CciI TCATGA 2 cut(s) 1387, 2235
Cfr13I GGNCC 3 cut(s) 268, 516, 1768
CseI GACGC 3 cut(s) 846, 863, 1292
Csp6I GTAC 5 cut(s) 134, 379, 864, 1648, 2249
CspCI CAANNNNNGTGG 4 cut(s) 526, 561, 951, 986
CviQI GTAC 5 cut(s) 134, 379, 864, 1648, 2249
DdeI CTNAG 7 cut(s) 165, 695, 894, 1406, 1676, 1745, 2054
DraI TTTAAA 1 cut(s) 1722
EaeI YGGCCR 2 cut(s) 1045, 1776
Eam1104I CTCTTC 2 cut(s) 1722, 1745
EarI CTCTTC 2 cut(s) 1722, 1745
Eco130I CCWWGG 4 cut(s) 448, 596, 647, 1852
Eco147I AGGCCT 1 cut(s) 2205
Eco24I GRGCYC 1 cut(s) 1220
Eco47I GGWCC 3 cut(s) 268, 516, 1768
Eco57I CTGAAG 1 cut(s) 426
Eco91I GGTNACC 1 cut(s) 328
EcoNI CCTNNNNNAGG 1 cut(s) 419
EcoO65I GGTNACC 1 cut(s) 328
EcoRI GAATTC 1 cut(s) 2139
EcoRII CCWGG 2 cut(s) 618, 2134
EcoT14I CCWWGG 4 cut(s) 448, 596, 647, 1852
EcoT22I ATGCAT 3 cut(s) 594, 1528, 1698
EcoT38I GRGCYC 1 cut(s) 1220
ErhI CCWWGG 4 cut(s) 448, 596, 647, 1852
FalI AAGNNNNNCTT 4 cut(s) 631, 663, 1485, 1517
FaqI GGGAC 1 cut(s) 502
FblI GTMKAC 1 cut(s) 1178
Fnu4HI GCNGC 7 cut(s) 162, 291, 474, 1620, 1623, 1907, 2277
FriOI GRGCYC 1 cut(s) 1220
Fsp4HI GCNGC 7 cut(s) 162, 291, 474, 1620, 1623, 1907, 2277
FspBI CTAG 5 cut(s) 75, 434, 1190, 1569, 1839
GluI GCNGC 7 cut(s) 162, 291, 474, 1620, 1623, 1907, 2277
GsuI CTGGAG 1 cut(s) 641
HaeIII GGCC 3 cut(s) 1047, 1778, 2205
HapII CCGG 1 cut(s) 861
HgaI GACGC 3 cut(s) 846, 863, 1292
HincII GTYRAC 1 cut(s) 853
HindII GTYRAC 1 cut(s) 853
HindIII AAGCTT 1 cut(s) 1403
HinfI GANTC 9 cut(s) 199, 227, 728, 959, 1231, 1897, 1928, 2184, 2221
HpaII CCGG 1 cut(s) 861
HphI GGTGA 6 cut(s) 985, 1205, 1923, 2014, 2239, 2303
Hpy166II GTNNAC 4 cut(s) 134, 853, 1179, 2311
Hpy8I GTNNAC 4 cut(s) 134, 853, 1179, 2311
Hpy99I CGWCG 1 cut(s) 639
HpyAV CCTTC 8 cut(s) 19, 739, 970, 1305, 1909, 2030, 2065, 2189
HpyCH4III ACNGT 5 cut(s) 13, 1064, 1357, 1864, 2248
HpyCH4IV ACGT 3 cut(s) 1650, 2077, 2251
HpyF10VI GCNNNNNNNGC 3 cut(s) 854, 1137, 2273
HpyF3I CTNAG 7 cut(s) 165, 695, 894, 1406, 1676, 1745, 2054
HpySE526I ACGT 3 cut(s) 1650, 2077, 2251
LguI GCTCTTC 1 cut(s) 1722
LmnI GCTCC 7 cut(s) 154, 287, 390, 548, 754, 1215, 1903
Lsp1109I GCAGC 6 cut(s) 148, 277, 460, 1606, 1634, 2288
LweI GCATC 7 cut(s) 601, 899, 1323, 1513, 1587, 1616, 2039
MaeI CTAG 5 cut(s) 75, 434, 1190, 1569, 1839
MaeII ACGT 3 cut(s) 1650, 2077, 2251
MaeIII GTNAC 7 cut(s) 209, 244, 328, 796, 1058, 1740, 2059
MbiI CCGCTC 2 cut(s) 22, 1906
MfeI CAATTG 2 cut(s) 963, 1772
MflI RGATCY 1 cut(s) 1144
MhlI GDGCHC 3 cut(s) 395, 1220, 2055
MlsI TGGCCA 2 cut(s) 1047, 1778
MluI ACGCGT 1 cut(s) 855
MluNI TGGCCA 2 cut(s) 1047, 1778
MlyI GAGTC 4 cut(s) 193, 1906, 1922, 2193
MmeI TCCRAC 1 cut(s) 931
Mox20I TGGCCA 2 cut(s) 1047, 1778
Mph1103I ATGCAT 3 cut(s) 594, 1528, 1698
MroXI GAANNNNTTC 2 cut(s) 369, 810
MscI TGGCCA 2 cut(s) 1047, 1778
MslI CAYNNNNRTG 2 cut(s) 218, 2090
Msp20I TGGCCA 2 cut(s) 1047, 1778
MspA1I CMGCKG 3 cut(s) 830, 1625, 2305
MspCI CTTAAG 1 cut(s) 94
MspI CCGG 1 cut(s) 861
MspR9I CCNGG 2 cut(s) 620, 2136
MunI CAATTG 2 cut(s) 963, 1772
Mva1269I GAATGC 2 cut(s) 1410, 1823
MvaI CCWGG 2 cut(s) 620, 2136
MvnI CGCG 1 cut(s) 857
MwoI GCNNNNNNNGC 3 cut(s) 854, 1137, 2273
NlaIV GGNNCC 3 cut(s) 518, 750, 1217
NmeAIII GCCGAG 2 cut(s) 1124, 1963
NmuCI GTSAC 2 cut(s) 209, 796
NsiI ATGCAT 3 cut(s) 594, 1528, 1698
NspI RCATGY 3 cut(s) 217, 985, 1565
PagI TCATGA 2 cut(s) 1387, 2235
PceI AGGCCT 1 cut(s) 2205
PciI ACATGT 1 cut(s) 1561
PciSI GCTCTTC 1 cut(s) 1722
PcsI WCGNNNNNNNCGW 1 cut(s) 1809
PctI GAATGC 2 cut(s) 1410, 1823
PdmI GAANNNNTTC 2 cut(s) 369, 810
PfeI GAWTC 5 cut(s) 227, 728, 959, 1231, 2221
Pfl23II CGTACG 1 cut(s) 1647
PfoI TCCNGGA 1 cut(s) 618
PkrI GCNGC 7 cut(s) 163, 292, 475, 1621, 1624, 1908, 2278
PleI GAGTC 4 cut(s) 193, 1905, 1922, 2192
PpsI GAGTC 4 cut(s) 193, 1905, 1922, 2192
PscI ACATGT 1 cut(s) 1561
PsiI TTATAA 1 cut(s) 2285
Psp6I CCWGG 2 cut(s) 618, 2134
PspEI GGTNACC 1 cut(s) 328
PspGI CCWGG 2 cut(s) 618, 2134
PspLI CGTACG 1 cut(s) 1647
PspN4I GGNNCC 3 cut(s) 518, 750, 1217
PspPI GGNCC 3 cut(s) 268, 516, 1768
PstI CTGCAG 1 cut(s) 1624
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 1 cut(s) 1144
PvuII CAGCTG 2 cut(s) 830, 1625
RsaI GTAC 5 cut(s) 135, 380, 865, 1649, 2250
RsaNI GTAC 5 cut(s) 134, 379, 864, 1648, 2249
RseI CAYNNNNRTG 2 cut(s) 218, 2090
SapI GCTCTTC 1 cut(s) 1722
SatI GCNGC 7 cut(s) 162, 291, 474, 1620, 1623, 1907, 2277
Sau96I GGNCC 3 cut(s) 268, 516, 1768
SchI GAGTC 4 cut(s) 193, 1906, 1922, 2193
ScrFI CCNGG 2 cut(s) 620, 2136
SduI GDGCHC 3 cut(s) 395, 1220, 2055
SfaNI GCATC 7 cut(s) 601, 899, 1323, 1513, 1587, 1616, 2039
SfcI CTRYAG 3 cut(s) 234, 831, 1620
SinI GGWCC 3 cut(s) 268, 516, 1768
SmiI ATTTAAAT 1 cut(s) 1722
SmiMI CAYNNNNRTG 2 cut(s) 218, 2090
SmlI CTYRAG 4 cut(s) 94, 374, 1306, 2108
SmoI CTYRAG 4 cut(s) 94, 374, 1306, 2108
SseBI AGGCCT 1 cut(s) 2205
SsiI CCGC 6 cut(s) 22, 465, 525, 1322, 1906, 2303
SspMI CTAG 5 cut(s) 75, 434, 1190, 1569, 1839
StuI AGGCCT 1 cut(s) 2205
StyD4I CCNGG 2 cut(s) 618, 2134
StyI CCWWGG 4 cut(s) 448, 596, 647, 1852
SwaI ATTTAAAT 1 cut(s) 1722
TaaI ACNGT 5 cut(s) 13, 1064, 1357, 1864, 2248
TaiI ACGT 3 cut(s) 1653, 2080, 2254
TaqI TCGA 6 cut(s) 18, 170, 814, 1803, 1812, 2182
TaqII GACCGA 1 cut(s) 504
TatI WGTACW 1 cut(s) 133
TauI GCSGC 1 cut(s) 1909
TfiI GAWTC 5 cut(s) 227, 728, 959, 1231, 2221
TscAI CASTG 5 cut(s) 18, 1233, 1360, 1801, 2251
TseFI GTSAC 2 cut(s) 209, 796
TseI GCWGC 6 cut(s) 161, 290, 473, 1619, 1622, 2276
Tsp45I GTSAC 2 cut(s) 209, 796
TspDTI ATGAA 8 cut(s) 471, 798, 819, 1077, 1740, 2093, 2102, 2252
TspRI CASTG 5 cut(s) 18, 1233, 1360, 1801, 2251
Vha464I CTTAAG 1 cut(s) 94
VpaK11BI GGWCC 3 cut(s) 268, 516, 1768
XagI CCTNNNNNAGG 1 cut(s) 419
XapI RAATTY 7 cut(s) 1258, 1363, 1834, 1844, 1986, 2139, 2297
XceI RCATGY 3 cut(s) 217, 985, 1565
XcmI CCANNNNNNNNNTGG 1 cut(s) 1159
XmiI GTMKAC 1 cut(s) 1178
XmnI GAANNNNTTC 2 cut(s) 369, 810
XspI CTAG 5 cut(s) 75, 434, 1190, 1569, 1839
Zsp2I ATGCAT 3 cut(s) 594, 1528, 1698
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.