Regulatory photoreceptor which exists in two forms that are reversibly interconvertible by light the Pr form that absorbs maximally in the red region of the spectrum and the Pfr form that absorbs maximally in the far-red region
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G35840 |
| fragaria_vesca | FvH4_6g40650 FvH4_6g40650 FvH4_6g40650 |
| malus_domestica | MD09G1126400.v1.1 |
| prunus_persica | Prupe.3G198200_v2.0.a1 Prupe.3G198200_v2.0.a1 |
| pyrus_communis | pycom09g05070 pycom17g10740 |
| rosa_chinensis | RchiOBHm_Chr2g0156021 |
| rosa_laevigata | RLG00000020882 |
| rosa_multiflora | Rmu_sc0011922.1_g000002 |
| rosa_rugosa | Rorug02G0451300 |
| rosa_samantha | Rh2AG518100 Rh2BG529300 Rh2CG502800 Rh2DG538400 |
| rosa_wichuraiana | Rw2G042660 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 606 |
| AarI | CACCTGC | 2 cut(s) | 1957, 2272 |
| Acc36I | ACCTGC | 3 cut(s) | 1957, 2272, 2278 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 353, 2596 |
| AccBSI | CCGCTC | 1 cut(s) | 2278 |
| AccI | GTMKAC | 1 cut(s) | 111 |
| AccII | CGCG | 1 cut(s) | 2556 |
| AccIII | TCCGGA | 1 cut(s) | 216 |
| AciI | CCGC | 6 cut(s) | 147, 195, 391, 587, 1566, 2278 |
| AclWI | GGATC | 5 cut(s) | 952, 1174, 1317, 1595, 2419 |
| AcsI | RAATTY | 3 cut(s) | 731, 2206, 2216 |
| AcuI | CTGAAG | 4 cut(s) | 100, 876, 1467, 1937 |
| AdeI | CACNNNGTG | 1 cut(s) | 2133 |
| AfaI | GTAC | 4 cut(s) | 1142, 1176, 1447, 2622 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 353, 797, 1381, 2051, 2507, 2596 |
| AflIII | ACRYGT | 1 cut(s) | 2449 |
| AjnI | CCWGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| AleI | CACNNNNGTG | 1 cut(s) | 722 |
| Alw21I | GWGCWC | 2 cut(s) | 1436, 2129 |
| Alw26I | GTCTC | 4 cut(s) | 963, 2331, 2563, 2636 |
| AlwI | GGATC | 5 cut(s) | 952, 1174, 1317, 1595, 2419 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 416, 818 |
| Ama87I | CYCGRG | 1 cut(s) | 490 |
| Aor13HI | TCCGGA | 1 cut(s) | 216 |
| AoxI | GGCC | 4 cut(s) | 232, 330, 1438, 2016 |
| ApoI | RAATTY | 3 cut(s) | 731, 2206, 2216 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1528 |
| AspS9I | GGNCC | 3 cut(s) | 331, 1557, 1790 |
| AsuHPI | GGTGA | 7 cut(s) | 1058, 1287, 1363, 2295, 2386, 2611, 2675 |
| AsuII | TTCGAA | 1 cut(s) | 2488 |
| AvaI | CYCGRG | 1 cut(s) | 490 |
| AvaII | GGWCC | 2 cut(s) | 1557, 1790 |
| AxyI | CCTNAGG | 1 cut(s) | 1262 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1132, 1165 |
| BanII | GRGCYC | 2 cut(s) | 70, 2574 |
| BbsI | GAAGAC | 1 cut(s) | 2076 |
| Bbv12I | GWGCWC | 2 cut(s) | 1436, 2129 |
| BbvCI | CCTCAGC | 2 cut(s) | 2310, 2585 |
| BciT130I | CCWGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| BclI | TGATCA | 1 cut(s) | 1060 |
| BcoDI | GTCTC | 4 cut(s) | 963, 2331, 2563, 2636 |
| BfaI | CTAG | 6 cut(s) | 51, 104, 180, 1116, 1277, 1941 |
| BfmI | CTRYAG | 2 cut(s) | 298, 1992 |
| BfuAI | ACCTGC | 3 cut(s) | 1957, 2272, 2278 |
| BglII | AGATCT | 1 cut(s) | 1486 |
| BlpI | GCTNAGC | 1 cut(s) | 924 |
| BmcAI | AGTACT | 1 cut(s) | 1447 |
| Bme1390I | CCNGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| Bme18I | GGWCC | 2 cut(s) | 1557, 1790 |
| BmeT110I | CYCGRG | 1 cut(s) | 490 |
| BmgT120I | GGNCC | 3 cut(s) | 331, 1557, 1790 |
| BmiI | GGNNCC | 3 cut(s) | 333, 789, 1559 |
| BmrFI | CCNGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| BmrI | ACTGGG | 1 cut(s) | 1923 |
| BmsI | GCATC | 7 cut(s) | 85, 526, 1016, 1149, 1258, 1620, 1800 |
| BmuI | ACTGGG | 1 cut(s) | 1923 |
| BpiI | GAAGAC | 1 cut(s) | 2076 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 222, 254, 946, 978 |
| Bpu10I | CCTNAGC | 2 cut(s) | 2310, 2585 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 924 |
| Bpu14I | TTCGAA | 1 cut(s) | 2488 |
| BpuEI | CTTGAG | 4 cut(s) | 154, 613, 2287, 2545 |
| BsaI | GGTCTC | 1 cut(s) | 963 |
| BsaJI | CCNNGG | 7 cut(s) | 409, 489, 1380, 1637, 1688, 2322, 2442 |
| BsaWI | WCCGGW | 2 cut(s) | 216, 574 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 353, 797, 1381, 2051, 2507, 2596 |
| Bse118I | RCCGGY | 1 cut(s) | 234 |
| Bse1I | ACTGG | 5 cut(s) | 554, 1792, 1918, 2389, 2682 |
| Bse21I | CCTNAGG | 1 cut(s) | 1262 |
| Bse3DI | GCAATG | 3 cut(s) | 190, 422, 1745 |
| BseAI | TCCGGA | 1 cut(s) | 216 |
| BseBI | CCWGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| BseDI | CCNNGG | 7 cut(s) | 409, 489, 1380, 1637, 1688, 2322, 2442 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 353, 797, 1381, 2051, 2507, 2596 |
| BseMI | GCAATG | 3 cut(s) | 190, 422, 1745 |
| BseMII | CTCAG | 8 cut(s) | 165, 756, 938, 1220, 2239, 2301, 2379, 2599 |
| BseNI | ACTGG | 5 cut(s) | 554, 1792, 1918, 2389, 2682 |
| BseRI | GAGGAG | 3 cut(s) | 951, 2201, 2649 |
| BseYI | CCCAGC | 1 cut(s) | 811 |
| BsgI | GTGCAG | 2 cut(s) | 1317, 2306 |
| Bsh1236I | CGCG | 1 cut(s) | 2556 |
| BshFI | GGCC | 4 cut(s) | 234, 332, 1440, 2018 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1436, 2129 |
| BsiHKCI | CYCGRG | 1 cut(s) | 490 |
| BsiSI | CCGG | 3 cut(s) | 217, 235, 575 |
| BslFI | GGGAC | 3 cut(s) | 391, 1543, 2470 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 353, 797, 1381, 2051, 2507, 2596 |
| BsmAI | GTCTC | 4 cut(s) | 963, 2331, 2563, 2636 |
| BsmBI | CGTCTC | 1 cut(s) | 2563 |
| BsmFI | GGGAC | 3 cut(s) | 391, 1543, 2470 |
| BsmI | GAATGC | 1 cut(s) | 2517 |
| BsnI | GGCC | 4 cut(s) | 234, 332, 1440, 2018 |
| Bso31I | GGTCTC | 1 cut(s) | 963 |
| BsoBI | CYCGRG | 1 cut(s) | 490 |
| Bsp119I | TTCGAA | 1 cut(s) | 2488 |
| Bsp1286I | GDGCHC | 4 cut(s) | 70, 1436, 2129, 2574 |
| Bsp13I | TCCGGA | 1 cut(s) | 216 |
| Bsp1407I | TGTACA | 2 cut(s) | 1174, 2620 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 924 |
| Bsp19I | CCATGG | 2 cut(s) | 1688, 2322 |
| BspACI | CCGC | 6 cut(s) | 147, 195, 391, 587, 1566, 2278 |
| BspANI | GGCC | 4 cut(s) | 234, 332, 1440, 2018 |
| BspCNI | CTCAG | 8 cut(s) | 164, 757, 937, 1219, 2238, 2302, 2378, 2598 |
| BspEI | TCCGGA | 1 cut(s) | 216 |
| BspFNI | CGCG | 1 cut(s) | 2556 |
| BspHI | TCATGA | 4 cut(s) | 736, 964, 2542, 2607 |
| BspLI | GGNNCC | 3 cut(s) | 333, 789, 1559 |
| BspMAI | CTGCAG | 1 cut(s) | 1996 |
| BspMI | ACCTGC | 3 cut(s) | 1957, 2272, 2278 |
| BspPI | GGATC | 5 cut(s) | 952, 1174, 1317, 1595, 2419 |
| BspQI | GCTCTTC | 2 cut(s) | 52, 2117 |
| BspT104I | TTCGAA | 1 cut(s) | 2488 |
| BspTNI | GGTCTC | 1 cut(s) | 963 |
| BsrBI | CCGCTC | 1 cut(s) | 2278 |
| BsrDI | GCAATG | 3 cut(s) | 190, 422, 1745 |
| BsrFI | RCCGGY | 1 cut(s) | 234 |
| BsrGI | TGTACA | 2 cut(s) | 1174, 2620 |
| BsrI | ACTGG | 5 cut(s) | 554, 1792, 1918, 2389, 2682 |
| BssAI | RCCGGY | 1 cut(s) | 234 |
| BssECI | CCNNGG | 7 cut(s) | 409, 489, 1380, 1637, 1688, 2322, 2442 |
| BssT1I | CCWWGG | 3 cut(s) | 1688, 2322, 2442 |
| Bst2UI | CCWGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| Bst4CI | ACNGT | 8 cut(s) | 132, 161, 202, 302, 343, 981, 1338, 2419 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 2117 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 643 |
| BstAUI | TGTACA | 2 cut(s) | 1174, 2620 |
| BstBI | TTCGAA | 1 cut(s) | 2488 |
| BstC8I | GCNNGC | 5 cut(s) | 236, 395, 612, 1468, 1989 |
| BstDSI | CCRYGG | 2 cut(s) | 1688, 2322 |
| BstEII | GGTNACC | 1 cut(s) | 1369 |
| BstFNI | CGCG | 1 cut(s) | 2556 |
| BstMAI | GTCTC | 4 cut(s) | 963, 2331, 2563, 2636 |
| BstMWI | GCNNNNNNNGC | 7 cut(s) | 590, 620, 643, 1063, 1988, 2110, 2284 |
| BstNI | CCWGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| BstNSI | RCATGY | 2 cut(s) | 1149, 1258 |
| BstPI | GGTNACC | 1 cut(s) | 1369 |
| BstSCI | CCNGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| BstSFI | CTRYAG | 2 cut(s) | 298, 1992 |
| BstUI | CGCG | 1 cut(s) | 2556 |
| BstV2I | GAAGAC | 1 cut(s) | 2076 |
| BstX2I | RGATCY | 3 cut(s) | 1179, 1309, 1486 |
| BstYI | RGATCY | 3 cut(s) | 1179, 1309, 1486 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1262 |
| BsuRI | GGCC | 4 cut(s) | 234, 332, 1440, 2018 |
| BtgI | CCRYGG | 2 cut(s) | 1688, 2322 |
| BtgZI | GCGATG | 1 cut(s) | 1509 |
| BtsI | GCAGTG | 2 cut(s) | 579, 2623 |
| BveI | ACCTGC | 3 cut(s) | 1957, 2272, 2278 |
| Cac8I | GCNNGC | 5 cut(s) | 236, 395, 612, 1468, 1989 |
| CaiI | CAGNNNCTG | 2 cut(s) | 416, 818 |
| CciI | TCATGA | 4 cut(s) | 736, 964, 2542, 2607 |
| Cfr10I | RCCGGY | 1 cut(s) | 234 |
| Cfr13I | GGNCC | 3 cut(s) | 331, 1557, 1790 |
| CseI | GACGC | 1 cut(s) | 2545 |
| Csp6I | GTAC | 4 cut(s) | 1141, 1175, 1446, 2621 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1567, 1602 |
| CviQI | GTAC | 4 cut(s) | 1141, 1175, 1446, 2621 |
| DraIII | CACNNNGTG | 1 cut(s) | 2133 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 2117 |
| EarI | CTCTTC | 2 cut(s) | 52, 2117 |
| EciI | GGCGGA | 2 cut(s) | 136, 184 |
| Eco130I | CCWWGG | 3 cut(s) | 1688, 2322, 2442 |
| Eco147I | AGGCCT | 1 cut(s) | 1440 |
| Eco24I | GRGCYC | 2 cut(s) | 70, 2574 |
| Eco31I | GGTCTC | 1 cut(s) | 963 |
| Eco47I | GGWCC | 2 cut(s) | 1557, 1790 |
| Eco57I | CTGAAG | 4 cut(s) | 100, 876, 1467, 1937 |
| Eco81I | CCTNAGG | 1 cut(s) | 1262 |
| Eco88I | CYCGRG | 1 cut(s) | 490 |
| Eco91I | GGTNACC | 1 cut(s) | 1369 |
| EcoO65I | GGTNACC | 1 cut(s) | 1369 |
| EcoRI | GAATTC | 2 cut(s) | 2206, 2216 |
| EcoRII | CCWGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| EcoT14I | CCWWGG | 3 cut(s) | 1688, 2322, 2442 |
| EcoT38I | GRGCYC | 2 cut(s) | 70, 2574 |
| ErhI | CCWWGG | 3 cut(s) | 1688, 2322, 2442 |
| Esp3I | CGTCTC | 1 cut(s) | 2563 |
| FalI | AAGNNNNNCTT | 6 cut(s) | 31, 63, 441, 473, 1857, 1889 |
| FaqI | GGGAC | 3 cut(s) | 391, 1543, 2470 |
| FauI | CCCGC | 1 cut(s) | 580 |
| FbaI | TGATCA | 1 cut(s) | 1060 |
| FblI | GTMKAC | 1 cut(s) | 111 |
| FriOI | GRGCYC | 2 cut(s) | 70, 2574 |
| FspBI | CTAG | 6 cut(s) | 51, 104, 180, 1116, 1277, 1941 |
| GsaI | CCCAGC | 1 cut(s) | 815 |
| HaeIII | GGCC | 4 cut(s) | 234, 332, 1440, 2018 |
| HapII | CCGG | 3 cut(s) | 217, 235, 575 |
| HgaI | GACGC | 1 cut(s) | 2545 |
| HincII | GTYRAC | 2 cut(s) | 157, 2319 |
| HindII | GTYRAC | 2 cut(s) | 157, 2319 |
| HindIII | AAGCTT | 2 cut(s) | 366, 608 |
| HpaII | CCGG | 3 cut(s) | 217, 235, 575 |
| HphI | GGTGA | 7 cut(s) | 1058, 1287, 1363, 2295, 2386, 2611, 2675 |
| Hpy166II | GTNNAC | 6 cut(s) | 112, 157, 2319, 2394, 2621, 2683 |
| Hpy188I | TCNGA | 5 cut(s) | 119, 127, 1381, 1486, 2368 |
| Hpy8I | GTNNAC | 6 cut(s) | 112, 157, 2319, 2394, 2621, 2683 |
| Hpy99I | CGWCG | 2 cut(s) | 1043, 1680 |
| HpyAV | CCTTC | 8 cut(s) | 42, 679, 900, 1063, 1606, 1895, 1899, 2561 |
| HpyCH4III | ACNGT | 8 cut(s) | 132, 161, 202, 302, 343, 981, 1338, 2419 |
| HpyCH4IV | ACGT | 3 cut(s) | 1860, 2449, 2469 |
| HpyF10VI | GCNNNNNNNGC | 7 cut(s) | 590, 620, 643, 1063, 1988, 2110, 2284 |
| HpySE526I | ACGT | 3 cut(s) | 1860, 2449, 2469 |
| Kpn2I | TCCGGA | 1 cut(s) | 216 |
| KroI | GCCGGC | 1 cut(s) | 234 |
| KroNI | GCCGGC | 1 cut(s) | 236 |
| Ksp22I | TGATCA | 1 cut(s) | 1060 |
| LguI | GCTCTTC | 2 cut(s) | 52, 2117 |
| LmnI | GCTCC | 5 cut(s) | 1054, 1263, 1328, 2275, 2636 |
| LweI | GCATC | 7 cut(s) | 85, 526, 1016, 1149, 1258, 1620, 1800 |
| MaeI | CTAG | 6 cut(s) | 51, 104, 180, 1116, 1277, 1941 |
| MaeII | ACGT | 3 cut(s) | 1860, 2449, 2469 |
| MaeIII | GTNAC | 7 cut(s) | 577, 1024, 1250, 1285, 1359, 1369, 1783 |
| MbiI | CCGCTC | 1 cut(s) | 2278 |
| MfeI | CAATTG | 1 cut(s) | 2144 |
| MflI | RGATCY | 3 cut(s) | 1179, 1309, 1486 |
| MhlI | GDGCHC | 4 cut(s) | 70, 1436, 2129, 2574 |
| MlyI | GAGTC | 2 cut(s) | 943, 2278 |
| MmeI | TCCRAC | 3 cut(s) | 303, 1372, 2462 |
| MroI | TCCGGA | 1 cut(s) | 216 |
| MroNI | GCCGGC | 1 cut(s) | 234 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1528 |
| MseI | TTAA | 6 cut(s) | 453, 897, 1317, 1671, 2093, 2691 |
| MslI | CAYNNNNRTG | 5 cut(s) | 473, 667, 722, 741, 2201 |
| MspA1I | CMGCKG | 4 cut(s) | 1729, 1997, 2309, 2697 |
| MspI | CCGG | 3 cut(s) | 217, 235, 575 |
| MspR9I | CCNGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| MunI | CAATTG | 1 cut(s) | 2144 |
| Mva1269I | GAATGC | 1 cut(s) | 2517 |
| MvaI | CCWGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| MvnI | CGCG | 1 cut(s) | 2556 |
| MwoI | GCNNNNNNNGC | 7 cut(s) | 590, 620, 643, 1063, 1988, 2110, 2284 |
| NaeI | GCCGGC | 1 cut(s) | 236 |
| NcoI | CCATGG | 2 cut(s) | 1688, 2322 |
| NgoMIV | GCCGGC | 1 cut(s) | 234 |
| NlaIV | GGNNCC | 3 cut(s) | 333, 789, 1559 |
| NmeAIII | GCCGAG | 1 cut(s) | 2553 |
| NmuCI | GTSAC | 5 cut(s) | 577, 1024, 1250, 1369, 1783 |
| NspI | RCATGY | 2 cut(s) | 1149, 1258 |
| NspV | TTCGAA | 1 cut(s) | 2488 |
| OliI | CACNNNNGTG | 1 cut(s) | 722 |
| PagI | TCATGA | 4 cut(s) | 736, 964, 2542, 2607 |
| PaqCI | CACCTGC | 2 cut(s) | 1957, 2272 |
| PceI | AGGCCT | 1 cut(s) | 1440 |
| PciSI | GCTCTTC | 2 cut(s) | 52, 2117 |
| PctI | GAATGC | 1 cut(s) | 2517 |
| PdiI | GCCGGC | 1 cut(s) | 236 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1528 |
| PfeI | GAWTC | 9 cut(s) | 122, 840, 1742, 1769, 2300, 2434, 2490, 2527, 2658 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 353, 2596 |
| PleI | GAGTC | 2 cut(s) | 942, 2277 |
| PpsI | GAGTC | 2 cut(s) | 942, 2277 |
| PsiI | TTATAA | 1 cut(s) | 606 |
| Psp6I | CCWGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| PspEI | GGTNACC | 1 cut(s) | 1369 |
| PspFI | CCCAGC | 1 cut(s) | 811 |
| PspGI | CCWGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| PspN4I | GGNNCC | 3 cut(s) | 333, 789, 1559 |
| PspPI | GGNCC | 3 cut(s) | 331, 1557, 1790 |
| PstI | CTGCAG | 1 cut(s) | 1996 |
| PstNI | CAGNNNCTG | 2 cut(s) | 416, 818 |
| PsuI | RGATCY | 3 cut(s) | 1179, 1309, 1486 |
| PvuII | CAGCTG | 4 cut(s) | 1729, 1997, 2309, 2697 |
| RsaI | GTAC | 4 cut(s) | 1142, 1176, 1447, 2622 |
| RsaNI | GTAC | 4 cut(s) | 1141, 1175, 1446, 2621 |
| RseI | CAYNNNNRTG | 5 cut(s) | 473, 667, 722, 741, 2201 |
| SapI | GCTCTTC | 2 cut(s) | 52, 2117 |
| SaqAI | TTAA | 6 cut(s) | 453, 897, 1317, 1671, 2093, 2691 |
| Sau96I | GGNCC | 3 cut(s) | 331, 1557, 1790 |
| ScaI | AGTACT | 1 cut(s) | 1447 |
| SchI | GAGTC | 2 cut(s) | 943, 2278 |
| ScrFI | CCNGG | 5 cut(s) | 411, 785, 1476, 1639, 2508 |
| SduI | GDGCHC | 4 cut(s) | 70, 1436, 2129, 2574 |
| SfaNI | GCATC | 7 cut(s) | 85, 526, 1016, 1149, 1258, 1620, 1800 |
| SfcI | CTRYAG | 2 cut(s) | 298, 1992 |
| SfuI | TTCGAA | 1 cut(s) | 2488 |
| SinI | GGWCC | 2 cut(s) | 1557, 1790 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 473, 667, 722, 741, 2201 |
| SmlI | CTYRAG | 4 cut(s) | 169, 628, 2266, 2560 |
| SmoI | CTYRAG | 4 cut(s) | 169, 628, 2266, 2560 |
| SseBI | AGGCCT | 1 cut(s) | 1440 |
| SsiI | CCGC | 6 cut(s) | 147, 195, 391, 587, 1566, 2278 |
| SspI | AATATT | 2 cut(s) | 352, 1759 |
| SspMI | CTAG | 6 cut(s) | 51, 104, 180, 1116, 1277, 1941 |
| StuI | AGGCCT | 1 cut(s) | 1440 |
| StyD4I | CCNGG | 5 cut(s) | 409, 783, 1474, 1637, 2506 |
| StyI | CCWWGG | 3 cut(s) | 1688, 2322, 2442 |
| TaaI | ACNGT | 8 cut(s) | 132, 161, 202, 302, 343, 981, 1338, 2419 |
| TaiI | ACGT | 3 cut(s) | 1863, 2452, 2472 |
| TaqI | TCGA | 3 cut(s) | 520, 2481, 2488 |
| TaqII | GACCGA | 1 cut(s) | 1545 |
| TatI | WGTACW | 3 cut(s) | 1174, 1445, 2620 |
| TauI | GCSGC | 1 cut(s) | 2281 |
| TfiI | GAWTC | 9 cut(s) | 122, 840, 1742, 1769, 2300, 2434, 2490, 2527, 2658 |
| Tru1I | TTAA | 6 cut(s) | 453, 897, 1317, 1671, 2093, 2691 |
| Tru9I | TTAA | 6 cut(s) | 453, 897, 1317, 1671, 2093, 2691 |
| TseFI | GTSAC | 5 cut(s) | 577, 1024, 1250, 1369, 1783 |
| Tsp45I | GTSAC | 5 cut(s) | 577, 1024, 1250, 1369, 1783 |
| TspGWI | ACGGA | 1 cut(s) | 1116 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 353, 2596 |
| VpaK11BI | GGWCC | 2 cut(s) | 1557, 1790 |
| XapI | RAATTY | 3 cut(s) | 731, 2206, 2216 |
| XbaI | TCTAGA | 1 cut(s) | 50 |
| XceI | RCATGY | 2 cut(s) | 1149, 1258 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1846 |
| XmiI | GTMKAC | 1 cut(s) | 111 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1528 |
| XspI | CTAG | 6 cut(s) | 51, 104, 180, 1116, 1277, 1941 |
| ZrmI | AGTACT | 1 cut(s) | 1447 |