pycom09g12140

non-haem dioxygenase in morphine synthesis N-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
OG0014284
Physical Location & Seq
Forward (+)
10581966 .. 10584222
2257 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g12140.3

Sequence Viewer

Length: 1203 bp
ATGATATGTCATTGTGCACAAGAACTAGAACAAGTGAGTTTATTCCATCACTCATCTCTCTACTTTCCAATCCCAATGGCAACCTCCCCGGAACCAATCTCCGAAAACCCTGTTGATTTTCGTGCCCCGCCGCCTTCTCCCGTTGCCTCTGGTCGCCTATCATCAGTCGCAAACGATGAAGTCCTCACCGAATTCCTCGAGCACTCCCTCCAAGTCCCTGACCTCATCTTGCCAGACAAGTTTTTCCCCAAGCAAATATCTATTGAAAACAATCCTCCCACAATTGATTTTGGAGCCCTGAATTCGGATGGATGTGACCCTAGTCTTTGCAAGGTGGTGGAGTCCATAGCAAGAAATGGATGCTTTCAGCTGGTGAACCATGGAATTTCAAGTGAGCTTGTGAGGCCAGTGCAGGCTGCCGCCGCGGGAATTTTTAGCGTGTCACCGGAGACGAGGGCTGAGGTTACTAGGTCACCGGAGAAGCCATACGGGTTCGAGGAAGTTCATGCTGAGGAGGCTGACCATGTATTGAGTGAAGAGTTTGTTTGGTGTAGAGACCAAGGCTTGAAGTTGGCAATGGATGGAATTGCCCCAATTGGATATTCAAATTTCAGTGAAAAACTAGAGACCCTTATGACAAATATTGAGAAAGTCTGTGAGAAAATTCTACTAAGCTTGTTGATTAATTCTCAAGAAAAAATCATTCATGGAGAAAGCAAAAATGATGAAACGGTGCAAAGGAAAGAAGTTGGGACAGTTTGTTGCTTGTACAAGCATAGCCAGAATGTGTTACAAGATGAATGGGATAAGTCTCTGAGATATGATGTGATTAAGATGCTGATTAGAGGGACTGATTACTCTCATGCCTTGTGTTTACATATCTGTGATGGTTCTTCAGAGTTCCATGTTTACTCCAAGAAAGGTTGGGTTTCTTTTATCCCAGTTAAAAATGCCCTAATAGTCACCACTGGGGACCAAATACAGGCATGGAGTGGCAGCCAGTATAAGCATGTGATTGGAAGGCCAATCTTTAAAGGTGAGGAGGAATTTATTTCAGTGGCTTTCCTCTATTCTCCTCCAAGCTTCATTACAAACTCCCAAAGCAGCAAGGAAAATACTATTTCACTTGGTCAACAAGTTATAGTGGCTATACTTCTTACTCTTGTCTATCAATTTTCAGTATACTTGTCAAGCCATTTCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

401

Amino Acids

44.57

Weight (kDa)

5.15

Isoelectric Point (pI)

44.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79760 AT1G79760
fragaria_vesca FvH4_6g32300 FvH4_6g32300
malus_domestica MD09G1204500.v1.1
prunus_persica Prupe.3G060100_v2.0.a1
pyrus_communis pycom09g12140
rosa_chinensis RchiOBHm_Chr2g0140341
rosa_laevigata RLG00000019860
rosa_multiflora Rmu_sc0005446.1_g000032
rosa_roxburghii Rroxscaffold_2G00104920
rosa_rugosa Rorug02G0361700
rosa_samantha Rh2AG413000 Rh2BG423400 Rh2CG399000 Rh2DG432300
rosa_wichuraiana Rw2G033850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 1182
AccII CGCG 1 cut(s) 425
AciI CCGC 5 cut(s) 128, 131, 420, 423, 425
AcsI RAATTY 7 cut(s) 191, 301, 384, 429, 607, 663, 1046
AcuI CTGAAG 1 cut(s) 879
AfaI GTAC 1 cut(s) 770
AfiI CCNNNNNNNGG 2 cut(s) 304, 982
AgsI TTSAA 4 cut(s) 266, 390, 568, 606
AjuI GAANNNNNNNTTGG 2 cut(s) 586, 618
AluBI AGCT 4 cut(s) 370, 397, 675, 1083
AluI AGCT 4 cut(s) 370, 397, 675, 1083
Alw21I GWGCWC 2 cut(s) 19, 204
Alw26I GTCTC 4 cut(s) 443, 549, 620, 816
Alw44I GTGCAC 1 cut(s) 15
Ama87I CYCGRG 1 cut(s) 197
AoxI GGCC 2 cut(s) 404, 1022
ApaLI GTGCAC 1 cut(s) 15
ApeKI GCWGC 3 cut(s) 416, 996, 1104
ApoI RAATTY 7 cut(s) 191, 301, 384, 429, 607, 663, 1046
AseI ATTAAT 1 cut(s) 684
AspS9I GGNCC 1 cut(s) 973
AsuC2I CCSGG 1 cut(s) 89
AsuHPI GGTGA 6 cut(s) 178, 385, 435, 465, 955, 1049
AvaI CYCGRG 1 cut(s) 197
AvaII GGWCC 1 cut(s) 973
BaeGI GKGCMC 2 cut(s) 19, 127
BanII GRGCYC 1 cut(s) 298
Bbv12I GWGCWC 2 cut(s) 19, 204
BbvCI CCTCAGC 2 cut(s) 459, 510
BbvI GCAGC 3 cut(s) 403, 1008, 1116
BccI CCATC 4 cut(s) 54, 302, 575, 881
BcnI CCSGG 1 cut(s) 89
BcoDI GTCTC 4 cut(s) 443, 549, 620, 816
BfaI CTAG 4 cut(s) 26, 321, 468, 623
BisI GCNGC 6 cut(s) 131, 417, 420, 423, 997, 1105
BlsI GCNGC 6 cut(s) 132, 418, 421, 424, 998, 1106
Bme1390I CCNGG 1 cut(s) 89
Bme18I GGWCC 1 cut(s) 973
BmeT110I CYCGRG 1 cut(s) 197
BmgT120I GGNCC 1 cut(s) 973
BmiI GGNNCC 3 cut(s) 93, 295, 974
BmrFI CCNGG 1 cut(s) 89
BmrI ACTGGG 2 cut(s) 935, 978
BmsI GCATC 2 cut(s) 350, 825
BmuI ACTGGG 2 cut(s) 935, 978
BoxI GACNNNNGTC 1 cut(s) 321
Bpu10I CCTNAGC 2 cut(s) 459, 510
BpuEI CTTGAG 1 cut(s) 675
BpuMI CCSGG 1 cut(s) 89
BsaI GGTCTC 2 cut(s) 549, 620
BsaJI CCNNGG 4 cut(s) 87, 379, 423, 559
BsaWI WCCGGW 2 cut(s) 445, 475
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 982
Bse1I ACTGG 4 cut(s) 407, 941, 973, 1000
Bse3DI GCAATG 1 cut(s) 582
BseDI CCNNGG 4 cut(s) 87, 379, 423, 559
BseGI GGATG 4 cut(s) 313, 317, 365, 586
BseLI CCNNNNNNNGG 2 cut(s) 304, 982
BseMI GCAATG 1 cut(s) 582
BseMII CTCAG 3 cut(s) 450, 501, 806
BseNI ACTGG 4 cut(s) 407, 941, 973, 1000
BseRI GAGGAG 3 cut(s) 527, 1055, 1065
BseSI GKGCMC 2 cut(s) 19, 127
BseXI GCAGC 3 cut(s) 403, 1008, 1116
BsgI GTGCAG 1 cut(s) 431
Bsh1236I CGCG 1 cut(s) 425
BshFI GGCC 2 cut(s) 406, 1024
BsiHKAI GWGCWC 2 cut(s) 19, 204
BsiHKCI CYCGRG 1 cut(s) 197
BsiSI CCGG 3 cut(s) 89, 446, 476
BslFI GGGAC 4 cut(s) 200, 766, 862, 986
BslI CCNNNNNNNGG 2 cut(s) 304, 982
BsmAI GTCTC 4 cut(s) 443, 549, 620, 816
BsmBI CGTCTC 1 cut(s) 443
BsmFI GGGAC 4 cut(s) 200, 766, 862, 986
BsnI GGCC 2 cut(s) 406, 1024
Bso31I GGTCTC 2 cut(s) 549, 620
BsoBI CYCGRG 1 cut(s) 197
Bsp1286I GDGCHC 4 cut(s) 19, 127, 204, 298
Bsp1407I TGTACA 1 cut(s) 768
Bsp19I CCATGG 1 cut(s) 379
BspACI CCGC 5 cut(s) 128, 131, 420, 423, 425
BspANI GGCC 2 cut(s) 406, 1024
BspCNI CTCAG 3 cut(s) 451, 502, 807
BspFNI CGCG 1 cut(s) 425
BspLI GGNNCC 3 cut(s) 93, 295, 974
BspTNI GGTCTC 2 cut(s) 549, 620
BsrDI GCAATG 1 cut(s) 582
BsrGI TGTACA 1 cut(s) 768
BsrI ACTGG 4 cut(s) 407, 941, 973, 1000
BssECI CCNNGG 4 cut(s) 87, 379, 423, 559
BssNAI GTATAC 1 cut(s) 1183
BssT1I CCWWGG 2 cut(s) 379, 559
Bst1107I GTATAC 1 cut(s) 1183
Bst4CI ACNGT 2 cut(s) 733, 757
Bst6I CTCTTC 1 cut(s) 531
BstAUI TGTACA 1 cut(s) 768
BstC8I GCNNGC 1 cut(s) 414
BstDEI CTNAG 4 cut(s) 459, 510, 671, 815
BstDSI CCRYGG 2 cut(s) 379, 423
BstEII GGTNACC 1 cut(s) 471
BstF5I GGATG 4 cut(s) 313, 317, 365, 586
BstFNI CGCG 1 cut(s) 425
BstMAI GTCTC 4 cut(s) 443, 549, 620, 816
BstMWI GCNNNNNNNGC 3 cut(s) 403, 422, 515
BstNSI RCATGY 1 cut(s) 1013
BstPAI GACNNNNGTC 1 cut(s) 321
BstPI GGTNACC 1 cut(s) 471
BstSCI CCNGG 1 cut(s) 87
BstSLI GKGCMC 2 cut(s) 19, 127
BstUI CGCG 1 cut(s) 425
BstV1I GCAGC 3 cut(s) 403, 1008, 1116
BstZ17I GTATAC 1 cut(s) 1183
BsuRI GGCC 2 cut(s) 406, 1024
BtgI CCRYGG 2 cut(s) 379, 423
BtsCI GGATG 4 cut(s) 313, 317, 365, 586
BtsIMutI CAGTG 4 cut(s) 414, 619, 966, 1062
Cac8I GCNNGC 1 cut(s) 414
Cfr13I GGNCC 1 cut(s) 973
Cfr42I CCGCGG 1 cut(s) 426
Csp6I GTAC 1 cut(s) 769
CviAII CATG 8 cut(s) 380, 506, 524, 707, 863, 905, 987, 1010
CviQI GTAC 1 cut(s) 769
DdeI CTNAG 4 cut(s) 459, 510, 671, 815
DraI TTTAAA 1 cut(s) 1033
Eam1104I CTCTTC 1 cut(s) 531
EarI CTCTTC 1 cut(s) 531
Eco130I CCWWGG 2 cut(s) 379, 559
Eco24I GRGCYC 1 cut(s) 298
Eco31I GGTCTC 2 cut(s) 549, 620
Eco47I GGWCC 1 cut(s) 973
Eco57I CTGAAG 1 cut(s) 879
Eco88I CYCGRG 1 cut(s) 197
Eco91I GGTNACC 1 cut(s) 471
EcoO65I GGTNACC 1 cut(s) 471
EcoRI GAATTC 2 cut(s) 191, 301
EcoT14I CCWWGG 2 cut(s) 379, 559
EcoT38I GRGCYC 1 cut(s) 298
ErhI CCWWGG 2 cut(s) 379, 559
Esp3I CGTCTC 1 cut(s) 443
FaeI CATG 8 cut(s) 383, 509, 527, 710, 866, 908, 990, 1013
FaqI GGGAC 4 cut(s) 200, 766, 862, 986
FatI CATG 8 cut(s) 379, 505, 523, 706, 862, 904, 986, 1009
FauI CCCGC 2 cut(s) 135, 418
FblI GTMKAC 1 cut(s) 1182
Fnu4HI GCNGC 6 cut(s) 131, 417, 420, 423, 997, 1105
FokI GGATG 4 cut(s) 320, 324, 372, 593
FriOI GRGCYC 1 cut(s) 298
Fsp4HI GCNGC 6 cut(s) 131, 417, 420, 423, 997, 1105
FspBI CTAG 4 cut(s) 26, 321, 468, 623
GluI GCNGC 6 cut(s) 131, 417, 420, 423, 997, 1105
HaeIII GGCC 2 cut(s) 406, 1024
HapII CCGG 3 cut(s) 89, 446, 476
Hin1II CATG 8 cut(s) 383, 509, 527, 710, 866, 908, 990, 1013
HincII GTYRAC 1 cut(s) 1133
HindII GTYRAC 1 cut(s) 1133
HindIII AAGCTT 2 cut(s) 673, 1081
HinfI GANTC 1 cut(s) 341
HpaII CCGG 3 cut(s) 89, 446, 476
HphI GGTGA 6 cut(s) 178, 385, 435, 465, 955, 1049
Hpy166II GTNNAC 6 cut(s) 17, 376, 875, 910, 1133, 1183
Hpy188I TCNGA 5 cut(s) 103, 307, 816, 898, 1202
Hpy188III TCNNGA 1 cut(s) 692
Hpy8I GTNNAC 6 cut(s) 17, 376, 875, 910, 1133, 1183
HpyAV CCTTC 2 cut(s) 144, 1014
HpyCH4III ACNGT 2 cut(s) 733, 757
HpyCH4V TGCA 4 cut(s) 17, 330, 412, 736
HpyF10VI GCNNNNNNNGC 3 cut(s) 403, 422, 515
HpyF3I CTNAG 4 cut(s) 459, 510, 671, 815
Hsp92II CATG 8 cut(s) 383, 509, 527, 710, 866, 908, 990, 1013
KspI CCGCGG 1 cut(s) 426
LmnI GCTCC 1 cut(s) 293
Lsp1109I GCAGC 3 cut(s) 403, 1008, 1116
LweI GCATC 2 cut(s) 350, 825
MaeI CTAG 4 cut(s) 26, 321, 468, 623
MaeIII GTNAC 6 cut(s) 314, 441, 463, 471, 789, 961
MboII GAAGA 2 cut(s) 548, 885
MfeI CAATTG 2 cut(s) 282, 594
MhlI GDGCHC 4 cut(s) 19, 127, 204, 298
MlyI GAGTC 1 cut(s) 350
MseI TTAA 4 cut(s) 684, 831, 945, 1032
MslI CAYNNNNRTG 1 cut(s) 882
MspA1I CMGCKG 2 cut(s) 370, 425
MspI CCGG 3 cut(s) 89, 446, 476
MspR9I CCNGG 1 cut(s) 89
MunI CAATTG 2 cut(s) 282, 594
MvnI CGCG 1 cut(s) 425
MwoI GCNNNNNNNGC 3 cut(s) 403, 422, 515
NciI CCSGG 1 cut(s) 89
NcoI CCATGG 1 cut(s) 379
NlaIII CATG 8 cut(s) 383, 509, 527, 710, 866, 908, 990, 1013
NlaIV GGNNCC 3 cut(s) 93, 295, 974
NmuCI GTSAC 4 cut(s) 314, 441, 471, 961
NspI RCATGY 1 cut(s) 1013
PaeR7I CTCGAG 1 cut(s) 197
PkrI GCNGC 6 cut(s) 132, 418, 421, 424, 998, 1106
PleI GAGTC 1 cut(s) 349
PpsI GAGTC 1 cut(s) 349
PshAI GACNNNNGTC 1 cut(s) 321
PshBI ATTAAT 1 cut(s) 684
PspEI GGTNACC 1 cut(s) 471
PspN4I GGNNCC 3 cut(s) 93, 295, 974
PspPI GGNCC 1 cut(s) 973
PspXI VCTCGAGB 1 cut(s) 197
PvuII CAGCTG 1 cut(s) 370
RsaI GTAC 1 cut(s) 770
RsaNI GTAC 1 cut(s) 769
RseI CAYNNNNRTG 1 cut(s) 882
SacII CCGCGG 1 cut(s) 426
SaqAI TTAA 4 cut(s) 684, 831, 945, 1032
SatI GCNGC 6 cut(s) 131, 417, 420, 423, 997, 1105
Sau96I GGNCC 1 cut(s) 973
SchI GAGTC 1 cut(s) 350
ScrFI CCNGG 1 cut(s) 89
SduI GDGCHC 4 cut(s) 19, 127, 204, 298
SfaNI GCATC 2 cut(s) 350, 825
Sfr274I CTCGAG 1 cut(s) 197
Sfr303I CCGCGG 1 cut(s) 426
SgrBI CCGCGG 1 cut(s) 426
SinI GGWCC 1 cut(s) 973
SlaI CTCGAG 1 cut(s) 197
SmiMI CAYNNNNRTG 1 cut(s) 882
SmlI CTYRAG 2 cut(s) 197, 690
SmoI CTYRAG 2 cut(s) 197, 690
SsiI CCGC 5 cut(s) 128, 131, 420, 423, 425
SspI AATATT 1 cut(s) 643
SspMI CTAG 4 cut(s) 26, 321, 468, 623
StyD4I CCNGG 1 cut(s) 87
StyI CCWWGG 2 cut(s) 379, 559
TaaI ACNGT 2 cut(s) 733, 757
TaqI TCGA 2 cut(s) 198, 495
TatI WGTACW 1 cut(s) 768
TauI GCSGC 3 cut(s) 133, 422, 425
Tru1I TTAA 4 cut(s) 684, 831, 945, 1032
Tru9I TTAA 4 cut(s) 684, 831, 945, 1032
TscAI CASTG 4 cut(s) 414, 619, 973, 1062
TseFI GTSAC 4 cut(s) 314, 441, 471, 961
TseI GCWGC 3 cut(s) 416, 996, 1104
Tsp45I GTSAC 4 cut(s) 314, 441, 471, 961
TspDTI ATGAA 6 cut(s) 192, 494, 695, 741, 813, 1075
TspRI CASTG 4 cut(s) 414, 619, 973, 1062
VneI GTGCAC 1 cut(s) 15
VpaK11BI GGWCC 1 cut(s) 973
VspI ATTAAT 1 cut(s) 684
XapI RAATTY 7 cut(s) 191, 301, 384, 429, 607, 663, 1046
XceI RCATGY 1 cut(s) 1013
XhoI CTCGAG 1 cut(s) 197
XmiI GTMKAC 1 cut(s) 1182
XspI CTAG 4 cut(s) 26, 321, 468, 623
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.