Rmu_sc0005446.1_g000032

non-haem dioxygenase in morphine synthesis N-terminal

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0005446.1
OG0014284
Physical Location & Seq
Reverse (-)
134703 .. 136897
2195 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0005446.1_g000032.1.cds

Sequence Viewer

Length: 1188 bp
atggcaagcttacctgaacccgtccacgaaaaccccattgattttcgtgccccgccaccttctccagttgcctctggccggcgatcatccctcacaaacgacgatgtcattaccgaattcctccagcactccctcaatgtccctgacctcatcttgccggacaaattctttccaaaacaaaaatcagttgaaaatccccccacaattgattttgaaacattgtgttcaaatcaatatgatgatgctagtgttacccagattattgagtcaatagcaagaattgggtgttttcagttagtgaaccatggaatttcaagtgagtttgtaaggtcagtgcaggctgaagccaccgggattttccaggtgccactggagaagagggcggacataacaaggtcaccggagaagccgtatgggttcgaggaagttcacggtgaggaagctgacaccgaattgagtgaagagttcgtttggtgtagagaacaaggtttgaagttggcaatggagggaatttggccaattgggcattcaaattattcaaatttcagcaagaaattggagacccttatgacagacattgagaagatttgtgagagaattctacaaagcttattgaactttaaacaaaaacaatctgttaatggaaatgctttggttcaaggaaaagaaattgggacagtttgttgtttttacaagcacaatcagaatgttttagctgataagtgggatagctatctgagatatgatgtgatcaggatgctgataagaggaactgattactctcatgccttgtgtctgcatctttgtgatggatcctcagagtttcatgtttactccaagaaaggttgggtttcttttagcccagataaagatgctcttgtagttaccacaggggaccaagtgcaggcatggagtggaagccaatacaagcatgtgataggaaggccaatctttaagtctgagaaggaggaatgcatttcaatggcccttctctattcctctccaagcaccatgacagactcccaaagcaacaaggaaaagaaaattttactcgcaagtctgcaaactttttgtttttggcctgaagagtattctacttgtgtgcttgatgttcagctcgagtgcaagatgcttgatagtgaaacaatgcttcagcagttcagccttgggcaatatgggagttgttaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
2OG-FeII_Oxy DIOX_N

Protein Analysis

395

Amino Acids

44.66

Weight (kDa)

5.07

Isoelectric Point (pI)

51.57

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0014284)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G79760 AT1G79760
fragaria_vesca FvH4_6g32300 FvH4_6g32300
malus_domestica MD09G1204500.v1.1
prunus_persica Prupe.3G060100_v2.0.a1
pyrus_communis pycom09g12140
rosa_chinensis RchiOBHm_Chr2g0140341
rosa_laevigata RLG00000019860
rosa_multiflora Rmu_sc0005446.1_g000032
rosa_roxburghii Rroxscaffold_2G00104920
rosa_rugosa Rorug02G0361700
rosa_samantha Rh2AG413000 Rh2BG423400 Rh2CG399000 Rh2DG432300
rosa_wichuraiana Rw2G033850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 364
AciI CCGC 2 cut(s) 53, 383
AclWI GGATC 2 cut(s) 807, 820
AcoI YGGCCR 2 cut(s) 76, 515
AcsI RAATTY 7 cut(s) 116, 164, 309, 510, 541, 597, 1044
AcuI CTGAAG 3 cut(s) 363, 1104, 1136
AfiI CCNNNNNNNGG 2 cut(s) 78, 904
AjnI CCWGG 1 cut(s) 360
AjuI GAANNNNNNNTTGG 2 cut(s) 511, 543
AluBI AGCT 6 cut(s) 9, 443, 609, 716, 732, 1117
AluI AGCT 6 cut(s) 9, 443, 609, 716, 732, 1117
Alw26I GTCTC 1 cut(s) 554
AlwI GGATC 2 cut(s) 807, 820
Ama87I CYCGRG 1 cut(s) 1118
AoxI GGCC 5 cut(s) 76, 515, 944, 984, 1079
ApoI RAATTY 7 cut(s) 116, 164, 309, 510, 541, 597, 1044
AspS9I GGNCC 2 cut(s) 895, 985
AsuC2I CCSGG 1 cut(s) 352
AsuHPI GGTGA 2 cut(s) 390, 446
AvaI CYCGRG 1 cut(s) 1118
AvaII GGWCC 1 cut(s) 895
BaeGI GKGCMC 1 cut(s) 52
BalI TGGCCA 1 cut(s) 517
BamHI GGATCC 1 cut(s) 812
BanI GGYRCC 1 cut(s) 364
BccI CCATC 1 cut(s) 803
BceAI ACGGC 1 cut(s) 394
BciT130I CCWGG 1 cut(s) 362
BclI TGATCA 1 cut(s) 750
BcnI CCSGG 1 cut(s) 352
BcoDI GTCTC 1 cut(s) 554
BfaI CTAG 1 cut(s) 246
BglI GCCNNNNNGGC 1 cut(s) 523
Bme1390I CCNGG 2 cut(s) 352, 362
Bme18I GGWCC 1 cut(s) 895
BmeT110I CYCGRG 1 cut(s) 1118
BmgT120I GGNCC 2 cut(s) 895, 985
BmiI GGNNCC 3 cut(s) 366, 814, 896
BmrFI CCNGG 2 cut(s) 352, 362
BmsI GCATC 5 cut(s) 232, 747, 808, 862, 1119
BpmI CTGGAG 3 cut(s) 48, 107, 392
BpuMI CCSGG 1 cut(s) 352
BsaBI GATNNNNATC 1 cut(s) 732
BsaI GGTCTC 1 cut(s) 554
BsaJI CCNNGG 2 cut(s) 304, 1165
BsaWI WCCGGW 1 cut(s) 400
BsaXI ACNNNNNCTCC 2 cut(s) 395, 425
Bsc4I CCNNNNNNNGG 2 cut(s) 78, 904
Bse118I RCCGGY 1 cut(s) 78
Bse1I ACTGG 2 cut(s) 65, 375
Bse3DI GCAATG 1 cut(s) 507
Bse8I GATNNNNATC 1 cut(s) 732
BseBI CCWGG 1 cut(s) 362
BseDI CCNNGG 2 cut(s) 304, 1165
BseGI GGATG 2 cut(s) 86, 762
BseJI GATNNNNATC 1 cut(s) 732
BseLI CCNNNNNNNGG 2 cut(s) 78, 904
BseMI GCAATG 1 cut(s) 507
BseMII CTCAG 3 cut(s) 728, 831, 951
BseNI ACTGG 2 cut(s) 65, 375
BseSI GKGCMC 1 cut(s) 52
BsgI GTGCAG 2 cut(s) 356, 923
BshFI GGCC 5 cut(s) 78, 517, 946, 986, 1081
BshNI GGYRCC 1 cut(s) 364
BsiHKCI CYCGRG 1 cut(s) 1118
BsiSI CCGG 4 cut(s) 79, 158, 351, 401
BslFI GGGAC 3 cut(s) 125, 688, 908
BslI CCNNNNNNNGG 2 cut(s) 78, 904
BsmAI GTCTC 1 cut(s) 554
BsmFI GGGAC 3 cut(s) 125, 688, 908
BsmI GAATGC 2 cut(s) 526, 977
BsnI GGCC 5 cut(s) 78, 517, 946, 986, 1081
Bso31I GGTCTC 1 cut(s) 554
BsoBI CYCGRG 1 cut(s) 1118
Bsp1286I GDGCHC 1 cut(s) 52
Bsp143I GATC 3 cut(s) 83, 750, 812
Bsp19I CCATGG 1 cut(s) 304
BspACI CCGC 2 cut(s) 53, 383
BspANI GGCC 5 cut(s) 78, 517, 946, 986, 1081
BspCNI CTCAG 3 cut(s) 729, 830, 952
BspLI GGNNCC 3 cut(s) 366, 814, 896
BspPI GGATC 2 cut(s) 807, 820
BspT107I GGYRCC 1 cut(s) 364
BspTNI GGTCTC 1 cut(s) 554
BsrDI GCAATG 1 cut(s) 507
BsrFI RCCGGY 1 cut(s) 78
BsrI ACTGG 2 cut(s) 65, 375
BssAI RCCGGY 1 cut(s) 78
BssECI CCNNGG 2 cut(s) 304, 1165
BssMI GATC 3 cut(s) 83, 750, 812
BssT1I CCWWGG 2 cut(s) 304, 1165
Bst2UI CCWGG 1 cut(s) 362
Bst4CI ACNGT 2 cut(s) 434, 679
Bst6I CTCTTC 3 cut(s) 371, 456, 1080
BstC8I GCNNGC 4 cut(s) 7, 80, 339, 906
BstDEI CTNAG 3 cut(s) 737, 817, 960
BstDSI CCRYGG 1 cut(s) 304
BstEII GGTNACC 1 cut(s) 396
BstF5I GGATG 2 cut(s) 86, 762
BstKTI GATC 3 cut(s) 86, 753, 815
BstMAI GTCTC 1 cut(s) 554
BstMBI GATC 3 cut(s) 83, 750, 812
BstMWI GCNNNNNNNGC 1 cut(s) 523
BstNI CCWGG 1 cut(s) 362
BstNSI RCATGY 1 cut(s) 935
BstPI GGTNACC 1 cut(s) 396
BstSCI CCNGG 2 cut(s) 350, 360
BstSLI GKGCMC 1 cut(s) 52
BstX2I RGATCY 1 cut(s) 812
BstYI RGATCY 1 cut(s) 812
BsuRI GGCC 5 cut(s) 78, 517, 946, 986, 1081
BtgI CCRYGG 1 cut(s) 304
BtsCI GGATG 2 cut(s) 86, 762
BtsIMutI CAGTG 2 cut(s) 339, 368
Cac8I GCNNGC 4 cut(s) 7, 80, 339, 906
Cfr10I RCCGGY 1 cut(s) 78
Cfr13I GGNCC 2 cut(s) 895, 985
CviAII CATG 6 cut(s) 305, 785, 827, 909, 932, 1012
DdeI CTNAG 3 cut(s) 737, 817, 960
DpnI GATC 3 cut(s) 85, 752, 814
DpnII GATC 3 cut(s) 83, 750, 812
DraI TTTAAA 1 cut(s) 622
EaeI YGGCCR 2 cut(s) 76, 515
Eam1104I CTCTTC 3 cut(s) 371, 456, 1080
EarI CTCTTC 3 cut(s) 371, 456, 1080
EciI GGCGGA 1 cut(s) 398
Eco130I CCWWGG 2 cut(s) 304, 1165
Eco31I GGTCTC 1 cut(s) 554
Eco47I GGWCC 1 cut(s) 895
Eco57I CTGAAG 3 cut(s) 363, 1104, 1136
Eco88I CYCGRG 1 cut(s) 1118
Eco91I GGTNACC 1 cut(s) 396
EcoO65I GGTNACC 1 cut(s) 396
EcoRI GAATTC 2 cut(s) 116, 597
EcoRII CCWGG 1 cut(s) 360
EcoT14I CCWWGG 2 cut(s) 304, 1165
EcoT22I ATGCAT 1 cut(s) 977
ErhI CCWWGG 2 cut(s) 304, 1165
FaeI CATG 6 cut(s) 308, 788, 830, 912, 935, 1015
FalI AAGNNNNNCTT 2 cut(s) 861, 893
FaqI GGGAC 3 cut(s) 125, 688, 908
FatI CATG 6 cut(s) 304, 784, 826, 908, 931, 1011
FauI CCCGC 1 cut(s) 60
FbaI TGATCA 1 cut(s) 750
FokI GGATG 2 cut(s) 73, 769
FspBI CTAG 1 cut(s) 246
GsuI CTGGAG 3 cut(s) 48, 107, 392
HaeIII GGCC 5 cut(s) 78, 517, 946, 986, 1081
HapII CCGG 4 cut(s) 79, 158, 351, 401
Hin1II CATG 6 cut(s) 308, 788, 830, 912, 935, 1015
HindIII AAGCTT 2 cut(s) 7, 607
HinfI GANTC 2 cut(s) 266, 1019
HpaII CCGG 4 cut(s) 79, 158, 351, 401
HphI GGTGA 2 cut(s) 390, 446
Hpy166II GTNNAC 4 cut(s) 25, 301, 430, 832
Hpy188I TCNGA 4 cut(s) 705, 738, 820, 961
Hpy188III TCNNGA 1 cut(s) 754
Hpy8I GTNNAC 4 cut(s) 25, 301, 430, 832
Hpy99I CGWCG 1 cut(s) 104
HpyAV CCTTC 4 cut(s) 69, 936, 958, 998
HpyCH4III ACNGT 2 cut(s) 434, 679
HpyCH4V TGCA 6 cut(s) 337, 799, 904, 975, 1063, 1125
HpyF10VI GCNNNNNNNGC 1 cut(s) 523
HpyF3I CTNAG 3 cut(s) 737, 817, 960
Hsp92II CATG 6 cut(s) 308, 788, 830, 912, 935, 1015
KroI GCCGGC 1 cut(s) 78
KroNI GCCGGC 1 cut(s) 80
Ksp22I TGATCA 1 cut(s) 750
Kzo9I GATC 3 cut(s) 83, 750, 812
LweI GCATC 5 cut(s) 232, 747, 808, 862, 1119
MaeI CTAG 1 cut(s) 246
MaeIII GTNAC 3 cut(s) 250, 396, 883
MalI GATC 3 cut(s) 85, 752, 814
MboI GATC 3 cut(s) 83, 750, 812
MboII GAAGA 4 cut(s) 388, 473, 595, 1097
MfeI CAATTG 2 cut(s) 204, 519
MflI RGATCY 1 cut(s) 812
MhlI GDGCHC 1 cut(s) 52
MlsI TGGCCA 1 cut(s) 517
MluNI TGGCCA 1 cut(s) 517
MlyI GAGTC 2 cut(s) 275, 1013
Mox20I TGGCCA 1 cut(s) 517
Mph1103I ATGCAT 1 cut(s) 977
MroNI GCCGGC 1 cut(s) 78
MscI TGGCCA 1 cut(s) 517
MseI TTAA 4 cut(s) 621, 639, 954, 1186
MslI CAYNNNNRTG 2 cut(s) 804, 980
Msp20I TGGCCA 1 cut(s) 517
MspI CCGG 4 cut(s) 79, 158, 351, 401
MspR9I CCNGG 2 cut(s) 352, 362
MunI CAATTG 2 cut(s) 204, 519
Mva1269I GAATGC 2 cut(s) 526, 977
MvaI CCWGG 1 cut(s) 362
MwoI GCNNNNNNNGC 1 cut(s) 523
NaeI GCCGGC 1 cut(s) 80
NciI CCSGG 1 cut(s) 352
NcoI CCATGG 1 cut(s) 304
NdeII GATC 3 cut(s) 83, 750, 812
NgoMIV GCCGGC 1 cut(s) 78
NlaIII CATG 6 cut(s) 308, 788, 830, 912, 935, 1015
NlaIV GGNNCC 3 cut(s) 366, 814, 896
NmuCI GTSAC 1 cut(s) 396
NsiI ATGCAT 1 cut(s) 977
NspI RCATGY 1 cut(s) 935
PaeR7I CTCGAG 1 cut(s) 1118
PctI GAATGC 2 cut(s) 526, 977
PdiI GCCGGC 1 cut(s) 80
PflFI GACNNNGTC 1 cut(s) 104
PleI GAGTC 2 cut(s) 274, 1013
PpsI GAGTC 2 cut(s) 274, 1013
Psp6I CCWGG 1 cut(s) 360
PspEI GGTNACC 1 cut(s) 396
PspGI CCWGG 1 cut(s) 360
PspN4I GGNNCC 3 cut(s) 366, 814, 896
PspPI GGNCC 2 cut(s) 895, 985
PspXI VCTCGAGB 1 cut(s) 1118
PsuI RGATCY 1 cut(s) 812
PsyI GACNNNGTC 1 cut(s) 104
RseI CAYNNNNRTG 2 cut(s) 804, 980
SaqAI TTAA 4 cut(s) 621, 639, 954, 1186
Sau3AI GATC 3 cut(s) 83, 750, 812
Sau96I GGNCC 2 cut(s) 895, 985
SchI GAGTC 2 cut(s) 275, 1013
ScrFI CCNGG 2 cut(s) 352, 362
SduI GDGCHC 1 cut(s) 52
SfaNI GCATC 5 cut(s) 232, 747, 808, 862, 1119
Sfr274I CTCGAG 1 cut(s) 1118
SinI GGWCC 1 cut(s) 895
SlaI CTCGAG 1 cut(s) 1118
SmiMI CAYNNNNRTG 2 cut(s) 804, 980
SmlI CTYRAG 1 cut(s) 1118
SmoI CTYRAG 1 cut(s) 1118
SsiI CCGC 2 cut(s) 53, 383
SspMI CTAG 1 cut(s) 246
StyD4I CCNGG 2 cut(s) 350, 360
StyI CCWWGG 2 cut(s) 304, 1165
TaaI ACNGT 2 cut(s) 434, 679
TaqI TCGA 2 cut(s) 420, 1119
Tru1I TTAA 4 cut(s) 621, 639, 954, 1186
Tru9I TTAA 4 cut(s) 621, 639, 954, 1186
TscAI CASTG 2 cut(s) 339, 375
TseFI GTSAC 1 cut(s) 396
Tsp45I GTSAC 1 cut(s) 396
TspDTI ATGAA 1 cut(s) 815
TspRI CASTG 2 cut(s) 339, 375
Tth111I GACNNNGTC 1 cut(s) 104
VpaK11BI GGWCC 1 cut(s) 895
XapI RAATTY 7 cut(s) 116, 164, 309, 510, 541, 597, 1044
XceI RCATGY 1 cut(s) 935
XhoI CTCGAG 1 cut(s) 1118
XspI CTAG 1 cut(s) 246
Zsp2I ATGCAT 1 cut(s) 977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.