Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

tig00001094

Orthogroup ID

OG0011954

Physical Location & Seq

Genomic Coordinates Forward (+)

197682 .. 201948

Gene Structure 4267 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1665 bp

ATGTTGGTTGTTGGGTTCTCAAATGGTGTATTTGGGTTGTATCAAATGCCTGATTTTGTGTGCTTGCACTTGTTGTCGATATCAAGAGAGAAAATTACAATGGCAGTTTTTAATGAACTTGGTAATTGGCTAACGTTTGGGTGTGCGAAACTTGGACAGTTGCTTGTGTGGGAGTGGAAGTCAGAGAGTTATATATTGAAGCAGCAGGGGCATTACTCCGATGTGAATTGTCTTGCTTATTCACCAGATTCGCAACTGTTAGCCACTGGAGCAGATGATAACAAAGTCAAGATCTGGACTGTTTCATCAGGGTTCTGCTTTATAACATTCTCTGAGCACGCTAATGCCATCACCGCACTCCACTTTATGGCTAACAGCCATAGTCTCCTAAGTGCCTCTCTGGATGGGACTGTTCGTGCATGGGATTCGTACCGTTATCGAAATTTTAGAACATTTACCACCCCTGAAACTAGGCAGTTTGTTTCACTGGCAGCAGATCAGAGTGGTGAAGTGATTTGTGCTGGAACCCTTGATTCCTTTGAGATCTTTGTTTGGTCGATGAAGACAAGCCGCCTGTTGGATATTCTTAGCGGCCATGAAGGTCCTGTTCATGGTTTGATGTTTTCTCCTACAAATGCAACTTTAGCTTCATCATCATGGGACAGAACAGTTTGGTTGTGGGATGTTTTTGATGGAAAAGGTGTTGTTGAAACATTTACTCATACACATGATGTTCTTACACTGGTTTACCGCCCTGATGGAAAGCAGTTGGCTAGCAGCACATTAGATGCTCAAATTCATTTCTGGGACCCAATTGATGGTTTATTAATGTATACCATTGAGGGCCGTAGGGATATTTCTGGAGGTCGTCTTATGACAGATCGTAGATCAGCTGCCAACTCAAGTTCAGGAAAATTCTTCACAACTTTATGTTATTCAGCTGATGGGACTTACGTATTAGCTGGAGGAAGTAGCAAATACATCTGCATGTATGATGTTGCTGATCAGGTGTTGCTGCAGAGGTTTCAAATAACTCACAATGTATCTTTGGATGGAGTTCTTGACTTCTTAAACTCAAAGAATATGACAGATGCTGGACCACTGGATTTAATTGACGATGATAACAGTGATATAGAAGAAGGTGTTGACAAGCAAACCCGGGGAAAGTTGGGTTATGATTTACCACGATCCATGCCTAACCATGGAAGGCCAGTTGTTAGAACAAAATGCTTGACAATTGCCCCCACTGGTCGGAGCTTCTCAGCAGCAACAACAGAGGGAGTTCTAGTTTATTCAATTGATGATTCCTTTATCTTTGACCCAACTGATCTTGACATTGATGTCACACCTGAGGCTGTTGATGCTGCACTCAATGAAGATAAATTGAGCAAGGCTTTAATCCTTAGTCTCAGATTAAACGAAGAGAGTCTATATAAAAAGTGTATTTTCAAAGTTAGTCCGATAGACATCCCTGCTGTCATCTCATCAATTGCGTACAGACATTTGCAAAGGTTAATTGAGGTATTTGCAGATCTGTTAGAAAGTCGCCCACATTTGGAGTTCATACTTCGGTGGTGTCAGGAGCTCTGCAAAGTTCATGGTAACCCTACAGAAGGCAATAACAAGAACACATCAGGATTTGAAAGAGACATGTTCTTCCAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000028 GO:0000151 GO:0000462 GO:0003674 GO:0003676 GO:0003723 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005730 GO:0006139 GO:0006364 GO:0006396 GO:0006725 GO:0006807 GO:0006996 GO:0007275 GO:0008150 GO:0008152 GO:0009553 GO:0009743 GO:0009744 GO:0009987 GO:0010033 GO:0010119 GO:0010467 GO:0016043 GO:0016070 GO:0016072 GO:0022607 GO:0022613 GO:0022618 GO:0030490 GO:0030515 GO:0030684 GO:0030686 GO:0031461 GO:0031974 GO:0031981 GO:0032040 GO:0032501 GO:0032502 GO:0032991 GO:0034285 GO:0034388 GO:0034470 GO:0034622 GO:0034641 GO:0034660 GO:0042221 GO:0042254 GO:0042255 GO:0042274 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044452 GO:0044464 GO:0046483 GO:0048229 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0065003 GO:0065007 GO:0070013 GO:0070925 GO:0071704 GO:0071826 GO:0071840 GO:0080008 GO:0090304 GO:0097159 GO:1901360 GO:1901363 GO:1901700 GO:1902494 GO:1990234 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko03008 map03008

Pfam Domains

Protein Families

Utp12 WD40

Protein Analysis

555

Amino Acids

61.89

Weight (kDa)

5.17

Isoelectric Point (pI)

38.12

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	2 - 227	2.7e-24	CDC20/Fizzy WD40 domain
WD40_Prp19	PF24814	12 - 176	1.4e-20	Prp19 WD40 domain
Beta-prop_WDR3_1st	PF25173	18 - 179	2.3e-24	WDR3 first beta-propeller domain
WDR55	PF24796	22 - 270	1.4e-18	WDR55
Beta-prop_WDR5	PF25175	28 - 179	1.9e-24	WDR5 beta-propeller domain
Beta-prop_THOC3	PF25174	29 - 156	1.6e-17	THOC3 beta-propeller domain
Beta-prop_EML_2	PF23414	29 - 132	1.4e-11	Echinoderm microtubule-associated protein second beta-propeller
WDR90_beta-prop_4th	PF23342	47 - 139	6.5e-07	WDR90, 4th beta-propeller
Beta-prop_WDR36-Utp21_2nd	PF25168	49 - 189	1.6e-13	WDR36/Utp21 second beta-propeller domain
Beta-prop_WDR36-Utp21_1st	PF25171	50 - 142	6e-08	WDR36/Utp21 first beta-propeller
WD40_MABP1-WDR62_2nd	PF24782	50 - 269	3e-16	MABP1/WDR62 second WD40 domain
Beta-prop_EML	PF23409	54 - 177	1.8e-08	Echinoderm microtubule-associated protein first beta-propeller
WD40_Gbeta	PF25391	57 - 221	1.4e-18	G protein beta WD-40 repeat protein
ANAPC4_WD40	PF12894	59 - 124	1.9e-06	Anaphase-promoting complex subunit 4 WD40 domain
Beta-prop_WDR3_2nd	PF25172	64 - 185	2e-18	WDR3 second beta-propeller domain
WD40	PF00400	67 - 99	5.2e-10	WD domain, G-beta repeat
Beta-prop_WDR75_1st	PF23869	67 - 173	5.1e-06	WD repeat-containing protein 75 first beta-propeller
Beta-prop_TEP1_2nd	PF25047	68 - 173	9.5e-10	TEP-1 second beta-propeller
EIF3I	PF24805	69 - 167	6.4e-07	EIF3I
Beta-prop_CAF1B_HIR1	PF24105	69 - 147	4e-07	CAF1B/HIR1 beta-propeller domain
WD40_WDHD1_1st	PF24817	73 - 153	3.1e-13	WDHD1 first WD40 domain
WD40	PF00400	106 - 142	4.1e-06	WD domain, G-beta repeat
WD40_CDC20-Fz	PF24807	117 - 287	2.8e-15	CDC20/Fizzy WD40 domain
Beta-prop_EML_2	PF23414	127 - 274	3.7e-12	Echinoderm microtubule-associated protein second beta-propeller
WD40_Gbeta	PF25391	129 - 283	2e-13	G protein beta WD-40 repeat protein
WD40_WDHD1_1st	PF24817	156 - 349	1.7e-18	WDHD1 first WD40 domain
Beta-prop_WDR3_1st	PF25173	157 - 284	3.1e-19	WDR3 first beta-propeller domain
Beta-prop_THOC3	PF25174	162 - 271	2.4e-16	THOC3 beta-propeller domain
EIF3I	PF24805	163 - 344	7.2e-08	EIF3I
Beta-prop_WDR3_2nd	PF25172	165 - 272	1.6e-06	WDR3 second beta-propeller domain
Beta-prop_WDR36-Utp21_2nd	PF25168	172 - 264	6.3e-09	WDR36/Utp21 second beta-propeller domain
Beta-prop_EML	PF23409	181 - 348	4.5e-08	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_SCAP	PF24017	181 - 281	1.1e-07	SCAP Beta-propeller
Beta-prop_WDR75_1st	PF23869	182 - 248	7e-06	WD repeat-containing protein 75 first beta-propeller
WD40_Prp19	PF24814	182 - 348	8.5e-12	Prp19 WD40 domain
Beta-prop_TEP1_2nd	PF25047	191 - 282	4.8e-07	TEP-1 second beta-propeller
WD40	PF00400	192 - 228	2.8e-08	WD domain, G-beta repeat
Beta-prop_CAF1B_HIR1	PF24105	193 - 321	2.3e-06	CAF1B/HIR1 beta-propeller domain
Utp12	PF04003	473 - 535	7.6e-11	Dip2/Utp12 Family

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0011954)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G15440 AT1G15440
fragaria_vesca	FvH4_6g30400 FvH4_6g30400
malus_domestica	MD09G1221400.v1.1 MD17G1203900.v1.1
prunus_persica	Prupe.3G078900_v2.0.a1
pyrus_communis	pycom1094g00080 pycom17g20750
rosa_chinensis	RchiOBHm_Chr2g0136751
rosa_laevigata	RLG00000019569
rosa_multiflora	Rmu_sc0001299.1_g000021
rosa_roxburghii	Rroxscaffold_2G00108100
rosa_rugosa	Rorug02G0332800
rosa_samantha	Rh2AG383600 Rh2BG390300 Rh2CG370100 Rh2DG406900
rosa_wichuraiana	Rw2G031370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	323
AasI	GACNNNNNNGTC	1 cut(s)	1340
AccB7I	CCANNNNNTGG	2 cut(s)	367, 818
AccI	GTMKAC	1 cut(s)	833
AciI	CCGC	4 cut(s)	354, 571, 591, 751
AclI	AACGTT	1 cut(s)	134
AclWI	GGATC	1 cut(s)	1182
AcoI	YGGCCR	1 cut(s)	592
AcsI	RAATTY	3 cut(s)	442, 795, 914
AfaI	GTAC	2 cut(s)	431, 1496
AfiI	CCNNNNNNNGG	8 cut(s)	367, 577, 611, 818, 1202, 1251, 1555, 1613
AflIII	ACRYGT	1 cut(s)	1650
AgsI	TTSAA	6 cut(s)	199, 710, 1028, 1296, 1450, 1643
AluBI	AGCT	6 cut(s)	647, 893, 941, 962, 1257, 1585
AluI	AGCT	6 cut(s)	647, 893, 941, 962, 1257, 1585
Alw21I	GWGCWC	2 cut(s)	339, 1587
Alw26I	GTCTC	3 cut(s)	389, 1412, 1641
AlwI	GGATC	1 cut(s)	1182
AlwNI	CAGNNNCTG	1 cut(s)	1094
Ama87I	CYCGRG	1 cut(s)	1158
AoxI	GGCC	3 cut(s)	592, 844, 1208
ApeKI	GCWGC	7 cut(s)	202, 491, 777, 893, 1015, 1265, 1364
ApoI	RAATTY	3 cut(s)	442, 795, 914
AseI	ATTAAT	1 cut(s)	827
AspS9I	GGNCC	4 cut(s)	602, 808, 844, 1097
AsuC2I	CCSGG	2 cut(s)	1159, 1160
AsuHPI	GGTGA	3 cut(s)	234, 343, 518
AsuNHI	GCTAGC	1 cut(s)	773
AvaI	CYCGRG	1 cut(s)	1158
AvaII	GGWCC	3 cut(s)	602, 808, 1097
AxyI	CCTNAGG	1 cut(s)	1350
BanII	GRGCYC	1 cut(s)	1587
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	2 cut(s)	339, 1587
BbvI	GCAGC	7 cut(s)	214, 503, 789, 880, 1002, 1277, 1351
BccI	CCATC	7 cut(s)	356, 398, 686, 752, 812, 938, 1046
BceAI	ACGGC	1 cut(s)	831
BcgI	CGANNNNNNTGC	2 cut(s)	408, 442
BclI	TGATCA	1 cut(s)	1003
BcnI	CCSGG	2 cut(s)	1159, 1160
BcoDI	GTCTC	3 cut(s)	389, 1412, 1641
BfaI	CTAG	3 cut(s)	471, 774, 1286
BfmI	CTRYAG	2 cut(s)	1016, 1608
BglII	AGATCT	3 cut(s)	291, 543, 1531
BisI	GCNGC	9 cut(s)	203, 492, 571, 592, 778, 894, 1016, 1266, 1365
BlsI	GCNGC	9 cut(s)	204, 493, 572, 593, 779, 895, 1017, 1267, 1366
Bme1390I	CCNGG	2 cut(s)	1159, 1160
Bme18I	GGWCC	3 cut(s)	602, 808, 1097
BmeT110I	CYCGRG	1 cut(s)	1158
BmgT120I	GGNCC	4 cut(s)	602, 808, 844, 1097
BmiI	GGNNCC	3 cut(s)	526, 809, 810
BmrFI	CCNGG	2 cut(s)	1159, 1160
BmsI	GCATC	3 cut(s)	778, 1081, 1351
BmtI	GCTAGC	1 cut(s)	777
BpiI	GAAGAC	1 cut(s)	569
BpmI	CTGGAG	3 cut(s)	288, 882, 984
BpuEI	CTTGAG	1 cut(s)	886
BpuMI	CCSGG	2 cut(s)	1159, 1160
BsaAI	YACGTR	1 cut(s)	955
BsaBI	GATNNNNATC	1 cut(s)	1466
BsaJI	CCNNGG	3 cut(s)	1158, 1159, 1201
BsaXI	ACNNNNNCTCC	4 cut(s)	164, 194, 1272, 1302
Bsc4I	CCNNNNNNNGG	8 cut(s)	367, 577, 611, 818, 1202, 1251, 1555, 1613
Bse1I	ACTGG	6 cut(s)	271, 492, 747, 1107, 1211, 1252
Bse21I	CCTNAGG	1 cut(s)	1350
Bse8I	GATNNNNATC	1 cut(s)	1466
BseDI	CCNNGG	3 cut(s)	1158, 1159, 1201
BseGI	GGATG	4 cut(s)	409, 688, 1057, 1467
BseJI	GATNNNNATC	1 cut(s)	1466
BseLI	CCNNNNNNNGG	8 cut(s)	367, 577, 611, 818, 1202, 1251, 1555, 1613
BseMII	CTCAG	4 cut(s)	324, 1275, 1341, 1423
BseNI	ACTGG	6 cut(s)	271, 492, 747, 1107, 1211, 1252
BseXI	GCAGC	7 cut(s)	214, 503, 789, 880, 1002, 1277, 1351
BsgI	GTGCAG	1 cut(s)	1350
BshFI	GGCC	3 cut(s)	594, 846, 1210
BsiHKAI	GWGCWC	2 cut(s)	339, 1587
BsiHKCI	CYCGRG	1 cut(s)	1158
BsiSI	CCGG	1 cut(s)	1159
BslFI	GGGAC	4 cut(s)	421, 674, 821, 961
BslI	CCNNNNNNNGG	8 cut(s)	367, 577, 611, 818, 1202, 1251, 1555, 1613
BsmAI	GTCTC	3 cut(s)	389, 1412, 1641
BsmFI	GGGAC	4 cut(s)	421, 674, 821, 961
BsnI	GGCC	3 cut(s)	594, 846, 1210
BsoBI	CYCGRG	1 cut(s)	1158
Bsp1286I	GDGCHC	2 cut(s)	339, 1587
Bsp143I	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
Bsp19I	CCATGG	1 cut(s)	1201
BspACI	CCGC	4 cut(s)	354, 571, 591, 751
BspANI	GGCC	3 cut(s)	594, 846, 1210
BspCNI	CTCAG	4 cut(s)	325, 1274, 1342, 1422
BspLI	GGNNCC	3 cut(s)	526, 809, 810
BspMAI	CTGCAG	1 cut(s)	1020
BspOI	GCTAGC	1 cut(s)	777
BspPI	GGATC	1 cut(s)	1182
BsrI	ACTGG	6 cut(s)	271, 492, 747, 1107, 1211, 1252
BssECI	CCNNGG	3 cut(s)	1158, 1159, 1201
BssMI	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
BssNAI	GTATAC	1 cut(s)	834
BssT1I	CCWWGG	1 cut(s)	1201
Bst1107I	GTATAC	1 cut(s)	834
Bst4CI	ACNGT	7 cut(s)	159, 258, 301, 412, 434, 670, 1127
Bst6I	CTCTTC	1 cut(s)	1416
BstBAI	YACGTR	1 cut(s)	955
BstC8I	GCNNGC	3 cut(s)	65, 339, 775
BstDEI	CTNAG	7 cut(s)	333, 389, 587, 1261, 1350, 1403, 1409
BstDSI	CCRYGG	1 cut(s)	1201
BstEII	GGTNACC	1 cut(s)	1601
BstENI	CCTNNNNNAGG	1 cut(s)	1611
BstF5I	GGATG	4 cut(s)	409, 688, 1057, 1467
BstKTI	GATC	9 cut(s)	294, 499, 546, 883, 890, 1006, 1190, 1330, 1534
BstMAI	GTCTC	3 cut(s)	389, 1412, 1641
BstMBI	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
BstMWI	GCNNNNNNNGC	5 cut(s)	208, 269, 353, 644, 1361
BstNSI	RCATGY	2 cut(s)	991, 1654
BstPI	GGTNACC	1 cut(s)	1601
BstSCI	CCNGG	2 cut(s)	1157, 1158
BstSFI	CTRYAG	2 cut(s)	1016, 1608
BstSNI	TACGTA	1 cut(s)	955
BstV1I	GCAGC	7 cut(s)	214, 503, 789, 880, 1002, 1277, 1351
BstV2I	GAAGAC	1 cut(s)	569
BstX2I	RGATCY	3 cut(s)	291, 543, 1531
BstYI	RGATCY	3 cut(s)	291, 543, 1531
BstZ17I	GTATAC	1 cut(s)	834
Bsu36I	CCTNAGG	1 cut(s)	1350
BsuRI	GGCC	3 cut(s)	594, 846, 1210
BtgI	CCRYGG	1 cut(s)	1201
BtsCI	GGATG	4 cut(s)	409, 688, 1057, 1467
BtsIMutI	CAGTG	6 cut(s)	264, 485, 740, 1100, 1132, 1245
Cac8I	GCNNGC	3 cut(s)	65, 339, 775
CaiI	CAGNNNCTG	1 cut(s)	1094
Cfr13I	GGNCC	4 cut(s)	602, 808, 844, 1097
Cfr9I	CCCGGG	1 cut(s)	1158
Csp6I	GTAC	2 cut(s)	430, 1495
CviQI	GTAC	2 cut(s)	430, 1495
DdeI	CTNAG	7 cut(s)	333, 389, 587, 1261, 1350, 1403, 1409
DpnI	GATC	9 cut(s)	293, 498, 545, 882, 889, 1005, 1189, 1329, 1533
DpnII	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
DrdI	GACNNNNNNGTC	1 cut(s)	1340
DseDI	GACNNNNNNGTC	1 cut(s)	1340
EaeI	YGGCCR	1 cut(s)	592
Eam1104I	CTCTTC	1 cut(s)	1416
EarI	CTCTTC	1 cut(s)	1416
Ecl136II	GAGCTC	1 cut(s)	1585
Eco105I	TACGTA	1 cut(s)	955
Eco130I	CCWWGG	1 cut(s)	1201
Eco24I	GRGCYC	1 cut(s)	1587
Eco32I	GATATC	1 cut(s)	81
Eco47I	GGWCC	3 cut(s)	602, 808, 1097
Eco53kI	GAGCTC	1 cut(s)	1585
Eco81I	CCTNAGG	1 cut(s)	1350
Eco88I	CYCGRG	1 cut(s)	1158
Eco91I	GGTNACC	1 cut(s)	1601
EcoICRI	GAGCTC	1 cut(s)	1585
EcoNI	CCTNNNNNAGG	1 cut(s)	1611
EcoO109I	RGGNCCY	2 cut(s)	602, 808
EcoO65I	GGTNACC	1 cut(s)	1601
EcoRV	GATATC	1 cut(s)	81
EcoT14I	CCWWGG	1 cut(s)	1201
EcoT38I	GRGCYC	1 cut(s)	1587
ErhI	CCWWGG	1 cut(s)	1201
FaqI	GGGAC	4 cut(s)	421, 674, 821, 961
FbaI	TGATCA	1 cut(s)	1003
FblI	GTMKAC	1 cut(s)	833
Fnu4HI	GCNGC	9 cut(s)	203, 492, 571, 592, 778, 894, 1016, 1266, 1365
FokI	GGATG	4 cut(s)	416, 695, 1064, 1454
FriOI	GRGCYC	1 cut(s)	1587
Fsp4HI	GCNGC	9 cut(s)	203, 492, 571, 592, 778, 894, 1016, 1266, 1365
FspBI	CTAG	3 cut(s)	471, 774, 1286
GluI	GCNGC	9 cut(s)	203, 492, 571, 592, 778, 894, 1016, 1266, 1365
GsuI	CTGGAG	3 cut(s)	288, 882, 984
HaeIII	GGCC	3 cut(s)	594, 846, 1210
HapII	CCGG	1 cut(s)	1159
HincII	GTYRAC	1 cut(s)	1147
HindII	GTYRAC	1 cut(s)	1147
HinfI	GANTC	5 cut(s)	248, 425, 533, 1304, 1426
HpaII	CCGG	1 cut(s)	1159
HphI	GGTGA	3 cut(s)	234, 343, 518
Hpy166II	GTNNAC	3 cut(s)	748, 834, 1147
Hpy188I	TCNGA	7 cut(s)	184, 220, 334, 501, 1254, 1412, 1461
Hpy8I	GTNNAC	3 cut(s)	748, 834, 1147
HpyAV	CCTTC	4 cut(s)	593, 1133, 1200, 1607
HpyCH4III	ACNGT	7 cut(s)	159, 258, 301, 412, 434, 670, 1127
HpyCH4IV	ACGT	2 cut(s)	134, 954
HpyCH4V	TGCA	9 cut(s)	67, 419, 638, 987, 1018, 1367, 1507, 1529, 1590
HpyF10VI	GCNNNNNNNGC	5 cut(s)	208, 269, 353, 644, 1361
HpyF3I	CTNAG	7 cut(s)	333, 389, 587, 1261, 1350, 1403, 1409
HpySE526I	ACGT	2 cut(s)	134, 954
KflI	GGGWCCC	1 cut(s)	808
Ksp22I	TGATCA	1 cut(s)	1003
Kzo9I	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
LmnI	GCTCC	3 cut(s)	269, 1254, 1582
Lsp1109I	GCAGC	7 cut(s)	214, 503, 789, 880, 1002, 1277, 1351
LweI	GCATC	3 cut(s)	778, 1081, 1351
MaeI	CTAG	3 cut(s)	471, 774, 1286
MaeII	ACGT	2 cut(s)	134, 954
MaeIII	GTNAC	2 cut(s)	1342, 1601
MalI	GATC	9 cut(s)	293, 498, 545, 882, 889, 1005, 1189, 1329, 1533
MboI	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
MboII	GAAGA	6 cut(s)	574, 910, 1148, 1388, 1433, 1648
MfeI	CAATTG	4 cut(s)	813, 1236, 1296, 1488
MflI	RGATCY	3 cut(s)	291, 543, 1531
MhlI	GDGCHC	2 cut(s)	339, 1587
MlyI	GAGTC	1 cut(s)	1435
MmeI	TCCRAC	2 cut(s)	558, 1232
MnlI	CCTC	8 cut(s)	406, 835, 857, 959, 1014, 1270, 1345, 1513
MseI	TTAA	7 cut(s)	111, 827, 1070, 1109, 1397, 1415, 1514
MslI	CAYNNNNRTG	4 cut(s)	342, 655, 726, 986
MspA1I	CMGCKG	2 cut(s)	893, 941
MspI	CCGG	1 cut(s)	1159
MspR9I	CCNGG	2 cut(s)	1159, 1160
MunI	CAATTG	4 cut(s)	813, 1236, 1296, 1488
MwoI	GCNNNNNNNGC	5 cut(s)	208, 269, 353, 644, 1361
NciI	CCSGG	2 cut(s)	1159, 1160
NcoI	CCATGG	1 cut(s)	1201
NdeII	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
NheI	GCTAGC	1 cut(s)	773
NlaIV	GGNNCC	3 cut(s)	526, 809, 810
NmuCI	GTSAC	1 cut(s)	1342
NspI	RCATGY	2 cut(s)	991, 1654
PciI	ACATGT	1 cut(s)	1650
PfeI	GAWTC	4 cut(s)	248, 425, 533, 1304
PflMI	CCANNNNNTGG	2 cut(s)	367, 818
PkrI	GCNGC	9 cut(s)	204, 493, 572, 593, 779, 895, 1017, 1267, 1366
PleI	GAGTC	1 cut(s)	1434
PpsI	GAGTC	1 cut(s)	1434
Ppu21I	YACGTR	1 cut(s)	955
PpuMI	RGGWCCY	2 cut(s)	602, 808
PscI	ACATGT	1 cut(s)	1650
PshBI	ATTAAT	1 cut(s)	827
PsiI	TTATAA	1 cut(s)	323
Psp124BI	GAGCTC	1 cut(s)	1587
Psp1406I	AACGTT	1 cut(s)	134
Psp5II	RGGWCCY	2 cut(s)	602, 808
PspEI	GGTNACC	1 cut(s)	1601
PspN4I	GGNNCC	3 cut(s)	526, 809, 810
PspPI	GGNCC	4 cut(s)	602, 808, 844, 1097
PspPPI	RGGWCCY	2 cut(s)	602, 808
PstI	CTGCAG	1 cut(s)	1020
PstNI	CAGNNNCTG	1 cut(s)	1094
PsuI	RGATCY	3 cut(s)	291, 543, 1531
PvuII	CAGCTG	2 cut(s)	893, 941
RsaI	GTAC	2 cut(s)	431, 1496
RsaNI	GTAC	2 cut(s)	430, 1495
RseI	CAYNNNNRTG	4 cut(s)	342, 655, 726, 986
SacI	GAGCTC	1 cut(s)	1587
SaqAI	TTAA	7 cut(s)	111, 827, 1070, 1109, 1397, 1415, 1514
SatI	GCNGC	9 cut(s)	203, 492, 571, 592, 778, 894, 1016, 1266, 1365
Sau3AI	GATC	9 cut(s)	291, 496, 543, 880, 887, 1003, 1187, 1327, 1531
Sau96I	GGNCC	4 cut(s)	602, 808, 844, 1097
SchI	GAGTC	1 cut(s)	1435
ScrFI	CCNGG	2 cut(s)	1159, 1160
SduI	GDGCHC	2 cut(s)	339, 1587
SfaNI	GCATC	3 cut(s)	778, 1081, 1351
SfcI	CTRYAG	2 cut(s)	1016, 1608
SinI	GGWCC	3 cut(s)	602, 808, 1097
SmaI	CCCGGG	1 cut(s)	1160
SmiMI	CAYNNNNRTG	4 cut(s)	342, 655, 726, 986
SmlI	CTYRAG	1 cut(s)	901
SmoI	CTYRAG	1 cut(s)	901
SnaBI	TACGTA	1 cut(s)	955
SsiI	CCGC	4 cut(s)	354, 571, 591, 751
SspMI	CTAG	3 cut(s)	471, 774, 1286
SstI	GAGCTC	1 cut(s)	1587
StyD4I	CCNGG	2 cut(s)	1157, 1158
StyI	CCWWGG	1 cut(s)	1201
TaaI	ACNGT	7 cut(s)	159, 258, 301, 412, 434, 670, 1127
TaiI	ACGT	2 cut(s)	137, 957
TaqI	TCGA	3 cut(s)	77, 439, 557
TauI	GCSGC	2 cut(s)	573, 594
TfiI	GAWTC	4 cut(s)	248, 425, 533, 1304
Tru1I	TTAA	7 cut(s)	111, 827, 1070, 1109, 1397, 1415, 1514
Tru9I	TTAA	7 cut(s)	111, 827, 1070, 1109, 1397, 1415, 1514
TscAI	CASTG	6 cut(s)	271, 492, 747, 1107, 1132, 1252
TseFI	GTSAC	1 cut(s)	1342
TseI	GCWGC	7 cut(s)	202, 491, 777, 893, 1015, 1265, 1364
Tsp45I	GTSAC	1 cut(s)	1342
TspMI	CCCGGG	1 cut(s)	1158
TspRI	CASTG	6 cut(s)	271, 492, 747, 1107, 1132, 1252
Van91I	CCANNNNNTGG	2 cut(s)	367, 818
VpaK11BI	GGWCC	3 cut(s)	602, 808, 1097
VspI	ATTAAT	1 cut(s)	827
XagI	CCTNNNNNAGG	1 cut(s)	1611
XapI	RAATTY	3 cut(s)	442, 795, 914
XceI	RCATGY	2 cut(s)	991, 1654
XmaI	CCCGGG	1 cut(s)	1158
XmiI	GTMKAC	1 cut(s)	833
XspI	CTAG	3 cut(s)	471, 774, 1286

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.