Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010957

Physical Location & Seq

Genomic Coordinates Forward (+)

16684784 .. 16687505

Gene Structure 2722 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1785 bp

ATGGAATCTGAACAAGCCACCACAGCTGCTAGCACCACCCGATTGAGCCCTTTCAAGTACTCGAATCGGGTGCTCTTGAAAACCATCTTGGAGAGAAGGGATGGTGGTTTGGAGTTGATTGGTGAGAGGGTTGTGATTGGAGGATGGGTGAAGTCCTCCAAGGAGGCCAGGAAAGAGCCGGTGCCACATATAGCTGGGGATTATGTGTCGGGTGAACCCGAACCAAGGTCAGACGTCAGCTGCATCGAAATTCTTCAGTCTCGGATACCTTTTTTACGAACAATTGTCAACGTCTTAGGCGGAGGAATTGGTGATCATTATCCACATACGGATAAGTTGGAAACATCGATTCATAAGTCCCCGCCGCCTTCCACTGTCTTCTTGAAAGTCGGCGATGGTTCTTGCGTTGCAAGCCTTCAGGTTGTTATTGAATCCTCCCTGGCTCCCCCATGCCAGCTCTTGCATACTGGAACTTGCATCATAGTGGAAGGCTTGCTGCAGAAGTCTTTGGTGCTACAAGGCAAATACGTTATAGAGCTGAAAGTGGATAAAGTTCATCACATCGGAACAGTAGAATATAGCAAGTATCCATTATCGAAAAAACGCGTGTCTCTAGATAAACTAAGGGAGTTTTGCCATATTAGACCGCGGACAACTACGGTGCAATCTGTCATGCGAATCCGCAATGCCCTGGAGTTTGCAGCTCACACATTTTGTCAAAACCATGGTTTTCTTTCGGTGCACGTACCCATTATAACAACTACAGACGGCAAAGGATCCAGTGAAAAATTCCATGTCACTAGCCATTTCGCAGCAGCAGGTGAAAAGGAGGAGCCTACGAAAGCAGTTGTTGAAATAGACGTTGTTAGCATAGATGTTATCAAGACTGCAGTAAAAGAGAAAAGTAATTTACTAGAGGAACTCAAGAGGAGCGACAGCAATAAGGAAGCAGTAGCTGCTGCAACGCAGGACTTAAAGAAAGCAAATGAGTTAGCATCACAATTGGAAGCAAGAGAGAAATCAAAACCGAAAACTTCTCAGAAGGTTGACAATGTTAAATCTTCTGAGGGTTACTTCTCTAGCCCAACTTATCTAACCTCTTCTGGCCGGATGCATCTGGAGAGCTACGCTTGCGCCTTTGGAAATGTGTACTCATTCGGGCCACGATTTCAAGCAGGGAAAGGAGAGTCCCCAAAACATACTGCAGAAATGTGGATGATTGAAGTTGAATTGGCATTTTCAGAATTAGAGGAAGCAATCAACTGTGCAGGTGACTTTTTCAAGTCCCTCTGCAAATGGGTAGTGGAAAATTGTTCGGAAGATATGAAATTCCTTTCTGAGCGAATCGACAAAACCAGAACTGAACGTCTTCAGTCAATGGTTTTGAGTACATTTGAAAGAGTTTCCTACACTGAAGCTTTAGATGCTTTAAAGAAGGTTACAGAAAAGACAAAGGACACAAAGATCGAGTGGGGTGCTGCACTAACTGAAGCGGATCTAAGTTGTTTGGCTGATGAGATCTACAAGAAGCCTGTAATTGTATACAATTATCCAAAAGAAACAAAGCCATTTTATGTCCGGCTTAACAATGATGGAAAAACAGTTGCAGCATTTGATATGGTTGTTCCAAAGGCTGGGAGGTTAATTTCTGGTAGCCAAAATGAGGAGCGCATCAACATTCTAACTACAAGGATTAAGGAATTGGGATTGGCAGCACAGCAGTACGAATGGTACTTGGATCTATCGCCGGCATGGAACCGTGAAGCACTCGGGATTCAATCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004812 GO:0004816 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006082 GO:0006139 GO:0006399 GO:0006412 GO:0006418 GO:0006421 GO:0006518 GO:0006520 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009058 GO:0009059 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016874 GO:0016875 GO:0019538 GO:0019752 GO:0034641 GO:0034645 GO:0034660 GO:0043038 GO:0043039 GO:0043043 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0043603 GO:0043604 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044271 GO:0044281 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0140098 GO:0140101 GO:1901360 GO:1901564 GO:1901566 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00970 map00970

Pfam Domains

Protein Families

tRNA-synt_2

Protein Analysis

595

Amino Acids

66.1

Weight (kDa)

7.22

Isoelectric Point (pI)

47.78

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
tRNA-synt_2	PF00152	357 - 581	4.3e-23	tRNA synthetases class II (D, K and N)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010957)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07420 AT3G07420
fragaria_vesca	FvH4_2g17960
malus_domestica	MD05G1163500.v1.1 MD10G1153300.v1.1
prunus_persica	Prupe.8G192100_v2.0.a1
pyrus_communis	pycom05g15290 pycom10g13220
rosa_chinensis	RchiOBHm_Chr6g0283201
rosa_laevigata	RLG00000012837
rosa_multiflora	Rmu_sc0006459.1_g000001 Rmu_sc0013038.1_g000019
rosa_roxburghii	Rroxscaffold_2G00106680 Rroxscaffold_7G00185650
rosa_rugosa	Rorug06G0152600
rosa_samantha	Rh6AG265000 Rh6BG267900 Rh6CG267100 Rh6DG260300
rosa_wichuraiana	Rw6G022970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	755
AarI	CACCTGC	2 cut(s)	809, 1259
AatII	GACGTC	1 cut(s)	237
Acc36I	ACCTGC	2 cut(s)	809, 1259
AccB1I	GGYRCC	1 cut(s)	181
AccB7I	CCANNNNNTGG	1 cut(s)	1634
AccI	GTMKAC	1 cut(s)	1542
AccII	CGCG	2 cut(s)	606, 649
AciI	CCGC	7 cut(s)	300, 362, 365, 647, 649, 682, 1493
AclWI	GGATC	4 cut(s)	771, 784, 1503, 1746
AcoI	YGGCCR	1 cut(s)	1105
AcsI	RAATTY	3 cut(s)	249, 788, 1328
AcuI	CTGAAG	5 cut(s)	239, 401, 1355, 1434, 1509
AcyI	GRCGYC	1 cut(s)	234
AfaI	GTAC	6 cut(s)	59, 747, 1151, 1390, 1724, 1733
AfiI	CCNNNNNNNGG	3 cut(s)	225, 1634, 1663
AflIII	ACRYGT	1 cut(s)	604
AjnI	CCWGG	3 cut(s)	167, 438, 690
AjuI	GAANNNNNNNTTGG	2 cut(s)	71, 103
AluBI	AGCT	9 cut(s)	26, 194, 240, 457, 538, 704, 956, 1125, 1418
AluI	AGCT	9 cut(s)	26, 194, 240, 457, 538, 704, 956, 1125, 1418
Alw21I	GWGCWC	2 cut(s)	75, 744
Alw26I	GTCTC	2 cut(s)	264, 615
Alw44I	GTGCAC	1 cut(s)	740
AlwI	GGATC	4 cut(s)	771, 784, 1503, 1746
AlwNI	CAGNNNCTG	1 cut(s)	956
Ama87I	CYCGRG	1 cut(s)	1769
AoxI	GGCC	3 cut(s)	165, 1105, 1160
ApaLI	GTGCAC	1 cut(s)	740
ApoI	RAATTY	3 cut(s)	249, 788, 1328
Asp700I	GAANNNNTTC	2 cut(s)	252, 1368
AspLEI	GCGC	2 cut(s)	1136, 1671
AspS9I	GGNCC	1 cut(s)	1160
AsuHPI	GGTGA	6 cut(s)	134, 160, 224, 323, 833, 1283
AsuNHI	GCTAGC	1 cut(s)	29
AvaI	CYCGRG	1 cut(s)	1769
BaeGI	GKGCMC	1 cut(s)	744
BamHI	GGATCC	1 cut(s)	776
BanI	GGYRCC	1 cut(s)	181
BanII	GRGCYC	1 cut(s)	50
BbsI	GAAGAC	2 cut(s)	370, 1361
Bbv12I	GWGCWC	2 cut(s)	75, 744
BccI	CCATC	5 cut(s)	92, 95, 138, 389, 1586
BceAI	ACGGC	1 cut(s)	784
BcgI	CGANNNNNNTGC	4 cut(s)	52, 86, 1457, 1491
BciT130I	CCWGG	3 cut(s)	169, 440, 692
BciVI	GTATCC	2 cut(s)	258, 597
BclI	TGATCA	1 cut(s)	313
BcoDI	GTCTC	2 cut(s)	264, 615
BfaI	CTAG	5 cut(s)	30, 614, 801, 914, 1080
BfmI	CTRYAG	4 cut(s)	497, 762, 888, 1203
BfuAI	ACCTGC	2 cut(s)	809, 1259
BfuI	GTATCC	2 cut(s)	258, 597
BglII	AGATCT	1 cut(s)	1518
BmcAI	AGTACT	1 cut(s)	59
Bme1390I	CCNGG	3 cut(s)	169, 440, 692
BmeT110I	CYCGRG	1 cut(s)	1769
BmgT120I	GGNCC	1 cut(s)	1160
BmiI	GGNNCC	5 cut(s)	183, 444, 778, 834, 1757
BmrFI	CCNGG	3 cut(s)	169, 440, 692
BmsI	GCATC	7 cut(s)	252, 486, 1004, 1101, 1123, 1414, 1680
BmtI	GCTAGC	1 cut(s)	33
BpiI	GAAGAC	2 cut(s)	370, 1361
BpmI	CTGGAG	2 cut(s)	713, 1139
BpuEI	CTTGAG	1 cut(s)	908
Bsa29I	ATCGAT	1 cut(s)	347
BsaAI	YACGTR	1 cut(s)	745
BsaBI	GATNNNNATC	1 cut(s)	318
BsaHI	GRCGYC	1 cut(s)	234
BsaJI	CCNNGG	6 cut(s)	159, 224, 438, 647, 690, 724
BsaXI	ACNNNNNCTCC	2 cut(s)	132, 162
Bsc4I	CCNNNNNNNGG	3 cut(s)	225, 1634, 1663
Bse118I	RCCGGY	2 cut(s)	178, 1747
Bse1I	ACTGG	2 cut(s)	472, 780
Bse3DI	GCAATG	1 cut(s)	691
Bse8I	GATNNNNATC	1 cut(s)	318
BseBI	CCWGG	3 cut(s)	169, 440, 692
BseCI	ATCGAT	1 cut(s)	347
BseDI	CCNNGG	6 cut(s)	159, 224, 438, 647, 690, 724
BseGI	GGATG	4 cut(s)	106, 149, 1116, 1221
BseJI	GATNNNNATC	1 cut(s)	318
BseLI	CCNNNNNNNGG	3 cut(s)	225, 1634, 1663
BseMI	GCAATG	1 cut(s)	691
BseMII	CTCAG	3 cut(s)	1052, 1056, 1329
BseNI	ACTGG	2 cut(s)	472, 780
BseRI	GAGGAG	3 cut(s)	845, 943, 1679
BseSI	GKGCMC	1 cut(s)	744
BseYI	CCCAGC	2 cut(s)	194, 1634
BsgI	GTGCAG	2 cut(s)	1287, 1464
Bsh1236I	CGCG	2 cut(s)	606, 649
BshFI	GGCC	3 cut(s)	167, 1107, 1162
BshNI	GGYRCC	1 cut(s)	181
BshVI	ATCGAT	1 cut(s)	347
BsiHKAI	GWGCWC	2 cut(s)	75, 744
BsiHKCI	CYCGRG	1 cut(s)	1769
BsiSI	CCGG	4 cut(s)	179, 1108, 1579, 1748
BslFI	GGGAC	3 cut(s)	343, 1174, 1270
BslI	CCNNNNNNNGG	3 cut(s)	225, 1634, 1663
BsmAI	GTCTC	2 cut(s)	264, 615
BsmFI	GGGAC	3 cut(s)	343, 1174, 1270
BsnI	GGCC	3 cut(s)	167, 1107, 1162
BsoBI	CYCGRG	1 cut(s)	1769
Bsp1286I	GDGCHC	3 cut(s)	50, 75, 744
Bsp143I	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
Bsp19I	CCATGG	1 cut(s)	724
BspACI	CCGC	7 cut(s)	300, 362, 365, 647, 649, 682, 1493
BspANI	GGCC	3 cut(s)	167, 1107, 1162
BspCNI	CTCAG	3 cut(s)	1051, 1057, 1330
BspDI	ATCGAT	1 cut(s)	347
BspFNI	CGCG	2 cut(s)	606, 649
BspLI	GGNNCC	5 cut(s)	183, 444, 778, 834, 1757
BspMAI	CTGCAG	3 cut(s)	501, 892, 1207
BspMI	ACCTGC	2 cut(s)	809, 1259
BspOI	GCTAGC	1 cut(s)	33
BspPI	GGATC	4 cut(s)	771, 784, 1503, 1746
BspT107I	GGYRCC	1 cut(s)	181
BsrDI	GCAATG	1 cut(s)	691
BsrFI	RCCGGY	2 cut(s)	178, 1747
BsrI	ACTGG	2 cut(s)	472, 780
BssAI	RCCGGY	2 cut(s)	178, 1747
BssECI	CCNNGG	6 cut(s)	159, 224, 438, 647, 690, 724
BssMI	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
BssNAI	GTATAC	1 cut(s)	1543
BssNI	GRCGYC	1 cut(s)	234
BssT1I	CCWWGG	3 cut(s)	159, 224, 724
Bst1107I	GTATAC	1 cut(s)	1543
Bst2UI	CCWGG	3 cut(s)	169, 440, 692
Bst4CI	ACNGT	6 cut(s)	376, 571, 661, 1265, 1603, 1760
Bst6I	CTCTTC	1 cut(s)	1105
BstACI	GRCGYC	1 cut(s)	234
BstAPI	GCANNNNNTGC	1 cut(s)	956
BstBAI	YACGTR	1 cut(s)	745
BstC8I	GCNNGC	6 cut(s)	31, 412, 455, 494, 1132, 1749
BstDEI	CTNAG	6 cut(s)	295, 623, 1038, 1065, 1338, 1499
BstDSI	CCRYGG	2 cut(s)	647, 724
BstF5I	GGATG	4 cut(s)	106, 149, 1116, 1221
BstFNI	CGCG	2 cut(s)	606, 649
BstHHI	GCGC	2 cut(s)	1136, 1671
BstKTI	GATC	6 cut(s)	316, 779, 1467, 1498, 1521, 1741
BstMAI	GTCTC	2 cut(s)	264, 615
BstMBI	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
BstMWI	GCNNNNNNNGC	5 cut(s)	23, 411, 956, 1131, 1424
BstNI	CCWGG	3 cut(s)	169, 440, 692
BstSCI	CCNGG	3 cut(s)	167, 438, 690
BstSFI	CTRYAG	4 cut(s)	497, 762, 888, 1203
BstSLI	GKGCMC	1 cut(s)	744
BstUI	CGCG	2 cut(s)	606, 649
BstV2I	GAAGAC	2 cut(s)	370, 1361
BstX2I	RGATCY	4 cut(s)	776, 1495, 1518, 1738
BstYI	RGATCY	4 cut(s)	776, 1495, 1518, 1738
BstZ17I	GTATAC	1 cut(s)	1543
Bsu15I	ATCGAT	1 cut(s)	347
BsuI	GTATCC	2 cut(s)	258, 597
BsuRI	GGCC	3 cut(s)	167, 1107, 1162
BsuTUI	ATCGAT	1 cut(s)	347
BtgI	CCRYGG	2 cut(s)	647, 724
BtgZI	GCGATG	1 cut(s)	408
BtsCI	GGATG	4 cut(s)	106, 149, 1116, 1221
BtsIMutI	CAGTG	3 cut(s)	372, 787, 1410
BveI	ACCTGC	2 cut(s)	809, 1259
Cac8I	GCNNGC	6 cut(s)	31, 412, 455, 494, 1132, 1749
CaiI	CAGNNNCTG	1 cut(s)	956
CfoI	GCGC	2 cut(s)	1136, 1671
Cfr10I	RCCGGY	2 cut(s)	178, 1747
Cfr13I	GGNCC	1 cut(s)	1160
Cfr42I	CCGCGG	1 cut(s)	650
ClaI	ATCGAT	1 cut(s)	347
Csp6I	GTAC	6 cut(s)	58, 746, 1150, 1389, 1723, 1732
CviAII	CATG	5 cut(s)	450, 673, 725, 794, 1752
CviQI	GTAC	6 cut(s)	58, 746, 1150, 1389, 1723, 1732
DdeI	CTNAG	6 cut(s)	295, 623, 1038, 1065, 1338, 1499
DpnI	GATC	6 cut(s)	315, 778, 1466, 1497, 1520, 1740
DpnII	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
DraI	TTTAAA	1 cut(s)	1431
EaeI	YGGCCR	1 cut(s)	1105
Eam1104I	CTCTTC	1 cut(s)	1105
EarI	CTCTTC	1 cut(s)	1105
EciI	GGCGGA	1 cut(s)	315
Eco130I	CCWWGG	3 cut(s)	159, 224, 724
Eco24I	GRGCYC	1 cut(s)	50
Eco57I	CTGAAG	5 cut(s)	239, 401, 1355, 1434, 1509
Eco88I	CYCGRG	1 cut(s)	1769
EcoRII	CCWGG	3 cut(s)	167, 438, 690
EcoT14I	CCWWGG	3 cut(s)	159, 224, 724
EcoT22I	ATGCAT	1 cut(s)	1116
EcoT38I	GRGCYC	1 cut(s)	50
ErhI	CCWWGG	3 cut(s)	159, 224, 724
FaeI	CATG	5 cut(s)	453, 676, 728, 797, 1755
FaqI	GGGAC	3 cut(s)	343, 1174, 1270
FatI	CATG	5 cut(s)	449, 672, 724, 793, 1751
FauI	CCCGC	1 cut(s)	369
FbaI	TGATCA	1 cut(s)	313
FblI	GTMKAC	1 cut(s)	1542
FokI	GGATG	4 cut(s)	113, 156, 1123, 1228
FriOI	GRGCYC	1 cut(s)	50
FspBI	CTAG	5 cut(s)	30, 614, 801, 914, 1080
GlaI	GCGC	2 cut(s)	1135, 1670
GsaI	CCCAGC	2 cut(s)	198, 1638
GsuI	CTGGAG	2 cut(s)	713, 1139
HaeIII	GGCC	3 cut(s)	167, 1107, 1162
HapII	CCGG	4 cut(s)	179, 1108, 1579, 1748
HhaI	GCGC	2 cut(s)	1136, 1671
Hin1I	GRCGYC	1 cut(s)	234
Hin1II	CATG	5 cut(s)	453, 676, 728, 797, 1755
Hin6I	GCGC	2 cut(s)	1134, 1669
HinP1I	GCGC	2 cut(s)	1134, 1669
HincII	GTYRAC	2 cut(s)	289, 1048
HindII	GTYRAC	2 cut(s)	289, 1048
HindIII	AAGCTT	1 cut(s)	1416
HinfI	GANTC	8 cut(s)	5, 64, 349, 431, 678, 1187, 1344, 1774
HpaII	CCGG	4 cut(s)	179, 1108, 1579, 1748
HphI	GGTGA	6 cut(s)	134, 160, 224, 323, 833, 1283
Hpy166II	GTNNAC	6 cut(s)	215, 289, 742, 1048, 1150, 1543
Hpy188I	TCNGA	9 cut(s)	10, 232, 264, 566, 1041, 1066, 1243, 1318, 1339
Hpy188III	TCNNGA	8 cut(s)	76, 382, 614, 883, 925, 1118, 1771, 1782
Hpy8I	GTNNAC	6 cut(s)	215, 289, 742, 1048, 1150, 1543
HpyAV	CCTTC	6 cut(s)	90, 378, 425, 482, 1036, 1429
HpyCH4III	ACNGT	6 cut(s)	376, 571, 661, 1265, 1603, 1760
HpyCH4IV	ACGT	6 cut(s)	234, 291, 528, 744, 861, 1366
HpyF10VI	GCNNNNNNNGC	5 cut(s)	23, 411, 956, 1131, 1424
HpyF3I	CTNAG	6 cut(s)	295, 623, 1038, 1065, 1338, 1499
HpySE526I	ACGT	6 cut(s)	234, 291, 528, 744, 861, 1366
Hsp92I	GRCGYC	1 cut(s)	234
Hsp92II	CATG	5 cut(s)	453, 676, 728, 797, 1755
HspAI	GCGC	2 cut(s)	1134, 1669
KroI	GCCGGC	1 cut(s)	1747
KroNI	GCCGGC	1 cut(s)	1749
Ksp22I	TGATCA	1 cut(s)	313
KspI	CCGCGG	1 cut(s)	650
Kzo9I	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
LmnI	GCTCC	4 cut(s)	448, 832, 930, 1666
LweI	GCATC	7 cut(s)	252, 486, 1004, 1101, 1123, 1414, 1680
MaeI	CTAG	5 cut(s)	30, 614, 801, 914, 1080
MaeII	ACGT	6 cut(s)	234, 291, 528, 744, 861, 1366
MaeIII	GTNAC	4 cut(s)	796, 1070, 1271, 1438
MalI	GATC	6 cut(s)	315, 778, 1466, 1497, 1520, 1740
MboI	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
MboII	GAAGA	6 cut(s)	245, 370, 1053, 1092, 1331, 1361
MfeI	CAATTG	2 cut(s)	282, 1001
MflI	RGATCY	4 cut(s)	776, 1495, 1518, 1738
MhlI	GDGCHC	3 cut(s)	50, 75, 744
MluI	ACGCGT	1 cut(s)	604
MlyI	GAGTC	1 cut(s)	1196
MmeI	TCCRAC	1 cut(s)	318
Mph1103I	ATGCAT	1 cut(s)	1116
MroNI	GCCGGC	1 cut(s)	1747
MroXI	GAANNNNTTC	2 cut(s)	252, 1368
MseI	TTAA	6 cut(s)	974, 1056, 1430, 1584, 1643, 1695
MslI	CAYNNNNRTG	1 cut(s)	482
MspA1I	CMGCKG	3 cut(s)	26, 240, 649
MspI	CCGG	4 cut(s)	179, 1108, 1579, 1748
MspR9I	CCNGG	3 cut(s)	169, 440, 692
MunI	CAATTG	2 cut(s)	282, 1001
MvaI	CCWGG	3 cut(s)	169, 440, 692
MvnI	CGCG	2 cut(s)	606, 649
MwoI	GCNNNNNNNGC	5 cut(s)	23, 411, 956, 1131, 1424
NaeI	GCCGGC	1 cut(s)	1749
NcoI	CCATGG	1 cut(s)	724
NdeII	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
NgoMIV	GCCGGC	1 cut(s)	1747
NheI	GCTAGC	1 cut(s)	29
NlaIII	CATG	5 cut(s)	453, 676, 728, 797, 1755
NlaIV	GGNNCC	5 cut(s)	183, 444, 778, 834, 1757
NmuCI	GTSAC	2 cut(s)	796, 1271
NsiI	ATGCAT	1 cut(s)	1116
PaqCI	CACCTGC	2 cut(s)	809, 1259
PdiI	GCCGGC	1 cut(s)	1749
PdmI	GAANNNNTTC	2 cut(s)	252, 1368
PfeI	GAWTC	7 cut(s)	5, 64, 349, 431, 678, 1344, 1774
PflMI	CCANNNNNTGG	1 cut(s)	1634
PleI	GAGTC	1 cut(s)	1195
PpsI	GAGTC	1 cut(s)	1195
Ppu21I	YACGTR	1 cut(s)	745
PsiI	TTATAA	1 cut(s)	755
Psp6I	CCWGG	3 cut(s)	167, 438, 690
PspFI	CCCAGC	2 cut(s)	194, 1634
PspGI	CCWGG	3 cut(s)	167, 438, 690
PspN4I	GGNNCC	5 cut(s)	183, 444, 778, 834, 1757
PspPI	GGNCC	1 cut(s)	1160
PstI	CTGCAG	3 cut(s)	501, 892, 1207
PstNI	CAGNNNCTG	1 cut(s)	956
PsuI	RGATCY	4 cut(s)	776, 1495, 1518, 1738
PvuII	CAGCTG	2 cut(s)	26, 240
RsaI	GTAC	6 cut(s)	59, 747, 1151, 1390, 1724, 1733
RsaNI	GTAC	6 cut(s)	58, 746, 1150, 1389, 1723, 1732
RseI	CAYNNNNRTG	1 cut(s)	482
SacII	CCGCGG	1 cut(s)	650
SaqAI	TTAA	6 cut(s)	974, 1056, 1430, 1584, 1643, 1695
Sau3AI	GATC	6 cut(s)	313, 776, 1464, 1495, 1518, 1738
Sau96I	GGNCC	1 cut(s)	1160
ScaI	AGTACT	1 cut(s)	59
SchI	GAGTC	1 cut(s)	1196
ScrFI	CCNGG	3 cut(s)	169, 440, 692
SduI	GDGCHC	3 cut(s)	50, 75, 744
SfaNI	GCATC	7 cut(s)	252, 486, 1004, 1101, 1123, 1414, 1680
SfcI	CTRYAG	4 cut(s)	497, 762, 888, 1203
Sfr303I	CCGCGG	1 cut(s)	650
SgrBI	CCGCGG	1 cut(s)	650
SmiMI	CAYNNNNRTG	1 cut(s)	482
SmlI	CTYRAG	1 cut(s)	923
SmoI	CTYRAG	1 cut(s)	923
SsiI	CCGC	7 cut(s)	300, 362, 365, 647, 649, 682, 1493
SspMI	CTAG	5 cut(s)	30, 614, 801, 914, 1080
StyD4I	CCNGG	3 cut(s)	167, 438, 690
StyI	CCWWGG	3 cut(s)	159, 224, 724
TaaI	ACNGT	6 cut(s)	376, 571, 661, 1265, 1603, 1760
TaiI	ACGT	6 cut(s)	237, 294, 531, 747, 864, 1369
TaqI	TCGA	6 cut(s)	62, 246, 347, 596, 1347, 1467
TatI	WGTACW	3 cut(s)	57, 1149, 1388
TauI	GCSGC	1 cut(s)	367
TfiI	GAWTC	7 cut(s)	5, 64, 349, 431, 678, 1344, 1774
Tru1I	TTAA	6 cut(s)	974, 1056, 1430, 1584, 1643, 1695
Tru9I	TTAA	6 cut(s)	974, 1056, 1430, 1584, 1643, 1695
TscAI	CASTG	3 cut(s)	379, 787, 1417
TseFI	GTSAC	2 cut(s)	796, 1271
Tsp45I	GTSAC	2 cut(s)	796, 1271
TspDTI	ATGAA	3 cut(s)	341, 545, 1340
TspGWI	ACGGA	1 cut(s)	344
TspRI	CASTG	3 cut(s)	379, 787, 1417
Van91I	CCANNNNNTGG	1 cut(s)	1634
VneI	GTGCAC	1 cut(s)	740
XapI	RAATTY	3 cut(s)	249, 788, 1328
XbaI	TCTAGA	1 cut(s)	613
XmiI	GTMKAC	1 cut(s)	1542
XmnI	GAANNNNTTC	2 cut(s)	252, 1368
XspI	CTAG	5 cut(s)	30, 614, 801, 914, 1080
ZraI	GACGTC	1 cut(s)	235
ZrmI	AGTACT	1 cut(s)	59
Zsp2I	ATGCAT	1 cut(s)	1116

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.