Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0016576

Physical Location & Seq

Genomic Coordinates Forward (+)

18481434 .. 18483734

Gene Structure 2301 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2301 bp

ATGGAACTCGAAACATTCAAAACCCATCTTTTTGTTTCCATTCTCTTCGTTTGCTTGGTTTCGATTCGTGCAAACACTCTCCAAACTTACATTGTTCAGCTCAACCCTCAAGGTGTGACCGGCTCTTCTTTTGCTTCTAAGCCGAGGTGGCATCTCTCGTTTCTTGAACAAACAATGTCTTCTGAAGAAGACGCTTCTTTGCGGCTTCTGTACTCTTACCATTCTGCCATGGAAGGATTCGCTGCTCAGCTATCTGAGTTGGAGCTTGAGTCCTTGAAAATGCTGCCGGATGTCATTGCAATTAGGCCTGACCATCGGCTCCAAATACACACCACTTATTCTTACAAATTCTTGGGACTCGGCGCTTCAAGTGAAGGTGCTTGGTACAAATCTGCGTTTGGTAGAGGCACAATCATTGGGGTGCTTGATACCGGAGTTTGGCCTGAGAGTCCAAGCTTCAATGATCGTGGAATGCCAGCAGTTCCCAAGAAATGGAGAGGAATTTGTCAAGAAGGGCAGAACTTCAATACTTCAAATTGCAACCGAAAACTCATTGGTGCCAGGTTCTTCACTAAAGGCCATCGCGTAGCTTCATACACACCAGATGGAGGTCGTGAGTATGTGTCACCACGTGATTCTCACGGGCATGGAACTCACACATCATCAACAGCAGGGGGCGCTACTGTCCCAATGGCAAGTGTTTTCGGCAATGCAGATGGTGTGGCTCGAGGAATGGCCCCGGGAGCGCATATAGCAGTGTACAAAGTCTGCTGGCTCAACGGATGTTATAGCTCTGATATCCTTGCTGCAATGGATGTTGCAATTAGAGATGGAGTAGACATTCTCTCCCTCTCTTTAGGTGGGTTCCCTGTTCCACTTTACGACGACAGCATTGCAATTGGAAGTTTTCGAGCAGTGGAGCATGGAATTTCAGTTGTGTGTGCAGCAGGCAACAATGGTCCAATCCAAAGCTCAGTTGCCAATGAAGCTCCTTGGATCACTACCGTTGGTGCAAGCACACTAGACCGAACATTTCCAGCCATAGTTCAAATGGGGAACGGAAAATACCTCTATGGAGAATCTTTGTACCAGGGAAACCATCTTAAGAGAGCAGGGAAAGAGCTTGAACTGGTTTATGTGACAAGTGAGAATAGTGGAAGTGAATATTGCTTCAAAGGGTCACTTCCACGAGCAAAAGTCCGTGGAAAAATTGTGGTTTGTGACCGAGGTGTCAATGGAAGGGCGGAGAAAGGCGAAGTGGTGAAGGAAGCTGGGGGTGCTGCAATGATTTTGGCAAACACAGCAATAAACCTAGAGGAAAACTCCGCCGATGTCCATGTCTTGCCTGCAACTCTCATTGGCTTCAAAGAATCAGTTCACTTGATGGCTTACATAAACTCTACTAGGAGACCGACAGCTAGAATTGTATTCGGAGGTACAGTTATAGGAAAATCCAGAGCACCAGCAGTAGCTCAATTCTCCGCTAGAGGACCGAGCTATTCAAACCCTACAATCCTCAAACCGGATGTGATTGCTCCCGGGGTCAACATCATTGCTGCTTGGCCTCAAAACTTAGGCCCCACTGGCCTTCCAGATGATTCTAGAAGAGTGAATTTTACTATCATGTCGGGGACATCAATGGCCTGTCCTCATGCCAGTGGAATTGCTGCTCTTATACGCTCAGCTCATCCCAAATGGAGCCCTGCAGCCATTAAATCTGCCGTTATGACAACTGCTGAGGTAACTGACCATTCAGGAAAACCGATAATGGATGGAGACAAACCAGCTGGAGTTTTTGCAATTGGTGCTGGACATATCAACCCCGAAAGAGCCATTGATCCCGGGTTGATTTATGACATCAGGCCGCAGGATTATGTCACGCATTTATGCACTCTTGGATACACAAAATCAGAAATTCTTACTATCACTCACCAGAACGTTAGCTGCCGTGAACTTTTGAAGATGAACAGGGGTTTCAGCCTCAATTACCCCTCCATTTCTGTAATTTTCAAACATGGTACGAGAAGTAAAATGATCAGAAGGCAAGTAACAAACGTCGGGAGTCCTAATTCCATTTACAAGCTGGAAGTAATGGCAACGAAGGAAGTAAAAGTGAGAGTTAAACCTCAAAGGTTAATGTTCACAGACATCAATCAGAGTTTGAGTTATAAGGTATGGTTTATATCAAGGAAGAGAACAGAAAAAGGGAAGATGAGCTTTGCACAAGGGCAGCTGACTTGGGTGAATTCTAACAATAGCTTGAACCGGGTTAAAAGCCCCTTCTCGGTGACTTGGAAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004175 GO:0004252 GO:0005575 GO:0005623 GO:0005886 GO:0006508 GO:0006807 GO:0007275 GO:0008150 GO:0008152 GO:0008233 GO:0008236 GO:0009653 GO:0009791 GO:0009888 GO:0009897 GO:0009986 GO:0010016 GO:0010103 GO:0010374 GO:0016020 GO:0016787 GO:0017171 GO:0019538 GO:0032501 GO:0032502 GO:0042127 GO:0043170 GO:0044238 GO:0044425 GO:0044459 GO:0044464 GO:0048367 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0065007 GO:0070011 GO:0071704 GO:0071944 GO:0090558 GO:0090626 GO:0090698 GO:0098552 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Inhibitor_I9 PA Peptidase_S8

Protein Analysis

767

Amino Acids

83.18

Weight (kDa)

9.38

Isoelectric Point (pI)

34.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Inhibitor_I9	PF05922	29 - 110	2.2e-17	Peptidase inhibitor I9
Peptidase_S8	PF00082	134 - 582	5.7e-49	Subtilase family
PA	PF02225	375 - 457	1.9e-13	PA domain
fn3_6	PF17766	661 - 763	1e-22	Fibronectin type-III domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0016576)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G04110
fragaria_vesca	FvH4_2g20460
malus_domestica	MD05G1188400.v1.1 MD10G1175900.v1.1
prunus_persica	Prupe.8G214900_v2.0.a1
pyrus_communis	pycom10g15150
rosa_chinensis	RchiOBHm_Chr6g0286551
rosa_laevigata	RLG00000012558
rosa_multiflora	Rmu_sc0004628.1_g000013
rosa_roxburghii	Rroxscaffold_7G00182190
rosa_rugosa	Rorug06G0181100
rosa_samantha	Rh6AG293900 Rh6BG297000
rosa_wichuraiana	Rw6G025300

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2169
AasI	GACNNNNNNGTC	1 cut(s)	1229
AccB1I	GGYRCC	1 cut(s)	557
AccB7I	CCANNNNNTGG	1 cut(s)	492
AccI	GTMKAC	1 cut(s)	837
AccII	CGCG	1 cut(s)	585
AciI	CCGC	5 cut(s)	202, 1244, 1326, 1482, 1865
AclI	AACGTT	1 cut(s)	1938
AclWI	GGATC	2 cut(s)	1004, 1832
AcsI	RAATTY	6 cut(s)	347, 501, 927, 1612, 1914, 2245
AcuI	CTGAAG	1 cut(s)	204
AcvI	CACGTG	1 cut(s)	632
AdeI	CACNNNGTG	1 cut(s)	632
AfaI	GTAC	6 cut(s)	212, 386, 761, 1088, 1438, 2020
AfiI	CCNNNNNNNGG	5 cut(s)	438, 492, 608, 1522, 2284
AflII	CTTAAG	1 cut(s)	1103
AjnI	CCWGG	2 cut(s)	560, 1089
Alw21I	GWGCWC	1 cut(s)	1462
Alw26I	GTCTC	2 cut(s)	1402, 1770
AlwI	GGATC	2 cut(s)	1004, 1832
Ama87I	CYCGRG	4 cut(s)	726, 739, 1538, 1841
AoxI	GGCC	9 cut(s)	305, 440, 577, 735, 1562, 1576, 1585, 1641, 1862
ApoI	RAATTY	6 cut(s)	347, 501, 927, 1612, 1914, 2245
Asp700I	GAANNNNTTC	1 cut(s)	1374
AspLEI	GCGC	3 cut(s)	365, 680, 748
AspS9I	GGNCC	4 cut(s)	736, 959, 1490, 1577
AsuC2I	CCSGG	7 cut(s)	740, 741, 1539, 1540, 1842, 1843, 2267
AsuHPI	GGTGA	5 cut(s)	618, 1273, 1922, 2254, 2299
AvaI	CYCGRG	4 cut(s)	726, 739, 1538, 1841
AvaII	GGWCC	2 cut(s)	959, 1490
BaeI	ACNNNNGTAYC	2 cut(s)	420, 453
BanI	GGYRCC	1 cut(s)	557
BanII	GRGCYC	1 cut(s)	1703
BauI	CACGAG	1 cut(s)	1188
BbrPI	CACGTG	1 cut(s)	632
BbsI	GAAGAC	2 cut(s)	171, 195
Bbv12I	GWGCWC	1 cut(s)	1462
BbvCI	CCTCAGC	1 cut(s)	1737
BccI	CCATC	9 cut(s)	33, 321, 588, 599, 710, 824, 1107, 1378, 1766
BceAI	ACGGC	2 cut(s)	1706, 1932
BcgI	CGANNNNNNTGC	2 cut(s)	875, 909
BciT130I	CCWGG	2 cut(s)	562, 1091
BciVI	GTATCC	1 cut(s)	1892
BclI	TGATCA	1 cut(s)	2034
BcnI	CCSGG	7 cut(s)	740, 741, 1539, 1540, 1842, 1843, 2267
BcoDI	GTCTC	2 cut(s)	1402, 1770
BfaI	CTAG	6 cut(s)	1022, 1313, 1404, 1419, 1485, 1602
BfmI	CTRYAG	1 cut(s)	1704
BfoI	RGCGCY	2 cut(s)	366, 681
BfrI	CTTAAG	1 cut(s)	1103
BfuI	GTATCC	1 cut(s)	1892
BglI	GCCNNNNNGGC	2 cut(s)	148, 1584
BlpI	GCTNAGC	2 cut(s)	246, 1681
Bme1390I	CCNGG	9 cut(s)	562, 740, 741, 1091, 1539, 1540, 1842, 1843, 2267
Bme18I	GGWCC	2 cut(s)	959, 1490
BmeT110I	CYCGRG	4 cut(s)	726, 739, 1538, 1841
BmgT120I	GGNCC	4 cut(s)	736, 959, 1490, 1577
BmiI	GGNNCC	6 cut(s)	320, 559, 738, 866, 1579, 1700
BmrFI	CCNGG	9 cut(s)	562, 740, 741, 1091, 1539, 1540, 1842, 1843, 2267
BmsI	GCATC	1 cut(s)	160
BpiI	GAAGAC	2 cut(s)	171, 195
BplI	GAGNNNNNCTC	2 cut(s)	1307, 1339
BpmI	CTGGAG	1 cut(s)	1809
Bpu10I	CCTNAGC	1 cut(s)	1737
Bpu1102I	GCTNAGC	2 cut(s)	246, 1681
BpuEI	CTTGAG	2 cut(s)	93, 287
BpuMI	CCSGG	7 cut(s)	740, 741, 1539, 1540, 1842, 1843, 2267
BsaAI	YACGTR	1 cut(s)	632
BsaI	GGTCTC	1 cut(s)	1402
BsaWI	WCCGGW	2 cut(s)	431, 1522
BsaXI	ACNNNNNCTCC	6 cut(s)	254, 284, 830, 860, 1425, 1455
Bsc4I	CCNNNNNNNGG	5 cut(s)	438, 492, 608, 1522, 2284
Bse118I	RCCGGY	1 cut(s)	119
Bse1I	ACTGG	3 cut(s)	1134, 1588, 1656
Bse3DI	GCAATG	6 cut(s)	294, 715, 816, 891, 1290, 1551
BseBI	CCWGG	2 cut(s)	562, 1091
BseGI	GGATG	6 cut(s)	295, 788, 820, 1531, 1687, 1777
BseLI	CCNNNNNNNGG	5 cut(s)	438, 492, 608, 1522, 2284
BseMI	GCAATG	6 cut(s)	294, 715, 816, 891, 1290, 1551
BseMII	CTCAG	6 cut(s)	246, 260, 435, 987, 1695, 1728
BseNI	ACTGG	3 cut(s)	1134, 1588, 1656
BseYI	CCCAGC	1 cut(s)	1271
BsgI	GTGCAG	1 cut(s)	963
Bsh1236I	CGCG	1 cut(s)	585
BshFI	GGCC	9 cut(s)	307, 442, 579, 737, 1564, 1578, 1587, 1643, 1864
BshNI	GGYRCC	1 cut(s)	557
BsiHKAI	GWGCWC	1 cut(s)	1462
BsiHKCI	CYCGRG	4 cut(s)	726, 739, 1538, 1841
BsiSI	CCGG	8 cut(s)	120, 287, 432, 740, 1523, 1539, 1842, 2266
BslFI	GGGAC	3 cut(s)	369, 671, 1645
BslI	CCNNNNNNNGG	5 cut(s)	438, 492, 608, 1522, 2284
BsmAI	GTCTC	2 cut(s)	1402, 1770
BsmFI	GGGAC	3 cut(s)	369, 671, 1645
BsmI	GAATGC	1 cut(s)	477
BsnI	GGCC	9 cut(s)	307, 442, 579, 737, 1564, 1578, 1587, 1643, 1864
Bso31I	GGTCTC	1 cut(s)	1402
BsoBI	CYCGRG	4 cut(s)	726, 739, 1538, 1841
Bsp1286I	GDGCHC	2 cut(s)	1462, 1703
Bsp1407I	TGTACA	1 cut(s)	759
Bsp143I	GATC	4 cut(s)	463, 996, 1837, 2034
Bsp1720I	GCTNAGC	2 cut(s)	246, 1681
Bsp19I	CCATGG	1 cut(s)	228
BspACI	CCGC	5 cut(s)	202, 1244, 1326, 1482, 1865
BspANI	GGCC	9 cut(s)	307, 442, 579, 737, 1564, 1578, 1587, 1643, 1864
BspCNI	CTCAG	6 cut(s)	247, 259, 436, 986, 1694, 1729
BspFNI	CGCG	1 cut(s)	585
BspLI	GGNNCC	6 cut(s)	320, 559, 738, 866, 1579, 1700
BspMAI	CTGCAG	1 cut(s)	1708
BspPI	GGATC	2 cut(s)	1004, 1832
BspQI	GCTCTTC	1 cut(s)	130
BspT107I	GGYRCC	1 cut(s)	557
BspTI	CTTAAG	1 cut(s)	1103
BspTNI	GGTCTC	1 cut(s)	1402
BsrDI	GCAATG	6 cut(s)	294, 715, 816, 891, 1290, 1551
BsrFI	RCCGGY	1 cut(s)	119
BsrGI	TGTACA	1 cut(s)	759
BsrI	ACTGG	3 cut(s)	1134, 1588, 1656
BssAI	RCCGGY	1 cut(s)	119
BssMI	GATC	4 cut(s)	463, 996, 1837, 2034
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	2 cut(s)	228, 992
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	2 cut(s)	562, 1091
Bst4CI	ACNGT	3 cut(s)	685, 1006, 1441
Bst6I	CTCTTC	4 cut(s)	50, 130, 1600, 2186
BstAFI	CTTAAG	1 cut(s)	1103
BstAPI	GCANNNNNTGC	1 cut(s)	1805
BstAUI	TGTACA	1 cut(s)	759
BstBAI	YACGTR	1 cut(s)	632
BstC8I	GCNNGC	5 cut(s)	477, 773, 949, 1015, 1347
BstDEI	CTNAG	8 cut(s)	138, 246, 255, 444, 973, 1573, 1681, 1737
BstDSI	CCRYGG	2 cut(s)	228, 1201
BstF5I	GGATG	6 cut(s)	295, 788, 820, 1531, 1687, 1777
BstFNI	CGCG	1 cut(s)	585
BstH2I	RGCGCY	2 cut(s)	366, 681
BstHHI	GCGC	3 cut(s)	365, 680, 748
BstKTI	GATC	4 cut(s)	466, 999, 1840, 2037
BstMAI	GTCTC	2 cut(s)	1402, 1770
BstMBI	GATC	4 cut(s)	463, 996, 1837, 2034
BstMWI	GCNNNNNNNGC	9 cut(s)	148, 677, 743, 752, 986, 1277, 1301, 1584, 1805
BstNI	CCWGG	2 cut(s)	562, 1091
BstSCI	CCNGG	9 cut(s)	560, 738, 739, 1089, 1537, 1538, 1840, 1841, 2265
BstSFI	CTRYAG	1 cut(s)	1704
BstUI	CGCG	1 cut(s)	585
BstV2I	GAAGAC	2 cut(s)	171, 195
BsuI	GTATCC	1 cut(s)	1892
BsuRI	GGCC	9 cut(s)	307, 442, 579, 737, 1564, 1578, 1587, 1643, 1864
BtgI	CCRYGG	2 cut(s)	228, 1201
BtgZI	GCGATG	1 cut(s)	566
BtsCI	GGATG	6 cut(s)	295, 788, 820, 1531, 1687, 1777
BtsI	GCAGTG	2 cut(s)	762, 921
BtsIMutI	CAGTG	4 cut(s)	762, 921, 1581, 1663
Cac8I	GCNNGC	5 cut(s)	477, 773, 949, 1015, 1347
CfoI	GCGC	3 cut(s)	365, 680, 748
Cfr10I	RCCGGY	1 cut(s)	119
Cfr13I	GGNCC	4 cut(s)	736, 959, 1490, 1577
Cfr9I	CCCGGG	3 cut(s)	739, 1538, 1841
CseI	GACGC	1 cut(s)	200
Csp6I	GTAC	6 cut(s)	211, 385, 760, 1087, 1437, 2019
CspCI	CAANNNNNGTGG	2 cut(s)	448, 483
CviAII	CATG	7 cut(s)	229, 647, 923, 1337, 1624, 1652, 2015
CviQI	GTAC	6 cut(s)	211, 385, 760, 1087, 1437, 2019
DdeI	CTNAG	8 cut(s)	138, 246, 255, 444, 973, 1573, 1681, 1737
DpnI	GATC	4 cut(s)	465, 998, 1839, 2036
DpnII	GATC	4 cut(s)	463, 996, 1837, 2034
DraIII	CACNNNGTG	1 cut(s)	632
DrdI	GACNNNNNNGTC	1 cut(s)	1229
DseDI	GACNNNNNNGTC	1 cut(s)	1229
Eam1104I	CTCTTC	4 cut(s)	50, 130, 1600, 2186
EarI	CTCTTC	4 cut(s)	50, 130, 1600, 2186
EciI	GGCGGA	2 cut(s)	1259, 1315
Eco130I	CCWWGG	2 cut(s)	228, 992
Eco147I	AGGCCT	1 cut(s)	307
Eco24I	GRGCYC	1 cut(s)	1703
Eco31I	GGTCTC	1 cut(s)	1402
Eco32I	GATATC	1 cut(s)	799
Eco47I	GGWCC	2 cut(s)	959, 1490
Eco57I	CTGAAG	1 cut(s)	204
Eco72I	CACGTG	1 cut(s)	632
Eco88I	CYCGRG	4 cut(s)	726, 739, 1538, 1841
EcoO109I	RGGNCCY	1 cut(s)	1577
EcoRI	GAATTC	1 cut(s)	2245
EcoRII	CCWGG	2 cut(s)	560, 1089
EcoRV	GATATC	1 cut(s)	799
EcoT14I	CCWWGG	2 cut(s)	228, 992
EcoT38I	GRGCYC	1 cut(s)	1703
ErhI	CCWWGG	2 cut(s)	228, 992
FaeI	CATG	7 cut(s)	232, 650, 926, 1340, 1627, 1655, 2018
FalI	AAGNNNNNCTT	4 cut(s)	1167, 1199, 2201, 2233
FaqI	GGGAC	3 cut(s)	369, 671, 1645
FatI	CATG	7 cut(s)	228, 646, 922, 1336, 1623, 1651, 2014
FbaI	TGATCA	1 cut(s)	2034
FblI	GTMKAC	1 cut(s)	837
FokI	GGATG	6 cut(s)	302, 795, 827, 1538, 1674, 1784
FriOI	GRGCYC	1 cut(s)	1703
FspBI	CTAG	6 cut(s)	1022, 1313, 1404, 1419, 1485, 1602
GlaI	GCGC	3 cut(s)	364, 679, 747
GsaI	CCCAGC	1 cut(s)	1275
GsuI	CTGGAG	1 cut(s)	1809
HaeII	RGCGCY	2 cut(s)	366, 681
HaeIII	GGCC	9 cut(s)	307, 442, 579, 737, 1564, 1578, 1587, 1643, 1864
HapII	CCGG	8 cut(s)	120, 287, 432, 740, 1523, 1539, 1842, 2266
HgaI	GACGC	1 cut(s)	200
HhaI	GCGC	3 cut(s)	365, 680, 748
Hin1II	CATG	7 cut(s)	232, 650, 926, 1340, 1627, 1655, 2018
Hin6I	GCGC	3 cut(s)	363, 678, 746
HinP1I	GCGC	3 cut(s)	363, 678, 746
HincII	GTYRAC	1 cut(s)	1546
HindII	GTYRAC	1 cut(s)	1546
HindIII	AAGCTT	1 cut(s)	454
HpaII	CCGG	8 cut(s)	120, 287, 432, 740, 1523, 1539, 1842, 2266
HphI	GGTGA	5 cut(s)	618, 1273, 1922, 2254, 2299
Hpy166II	GTNNAC	6 cut(s)	760, 838, 1378, 1546, 1952, 2142
Hpy188I	TCNGA	7 cut(s)	184, 256, 796, 1433, 1912, 2039, 2157
Hpy188III	TCNNGA	8 cut(s)	164, 509, 614, 1455, 1592, 1602, 1755, 2059
Hpy8I	GTNNAC	6 cut(s)	760, 838, 1378, 1546, 1952, 2142
Hpy99I	CGWCG	2 cut(s)	887, 2060
HpyAV	CCTTC	9 cut(s)	227, 368, 506, 1233, 1258, 1598, 2034, 2095, 2290
HpyCH4III	ACNGT	3 cut(s)	685, 1006, 1441
HpyCH4IV	ACGT	3 cut(s)	631, 1938, 2055
HpyF10VI	GCNNNNNNNGC	9 cut(s)	148, 677, 743, 752, 986, 1277, 1301, 1584, 1805
HpyF3I	CTNAG	8 cut(s)	138, 246, 255, 444, 973, 1573, 1681, 1737
HpySE526I	ACGT	3 cut(s)	631, 1938, 2055
Hsp92II	CATG	7 cut(s)	232, 650, 926, 1340, 1627, 1655, 2018
HspAI	GCGC	3 cut(s)	363, 678, 746
Ksp22I	TGATCA	1 cut(s)	2034
Kzo9I	GATC	4 cut(s)	463, 996, 1837, 2034
LguI	GCTCTTC	1 cut(s)	130
LmnI	GCTCC	7 cut(s)	262, 324, 743, 919, 994, 1540, 1698
LweI	GCATC	1 cut(s)	160
MaeI	CTAG	6 cut(s)	1022, 1313, 1404, 1419, 1485, 1602
MaeII	ACGT	3 cut(s)	631, 1938, 2055
MaeIII	GTNAC	9 cut(s)	115, 624, 1138, 1179, 1220, 1741, 1876, 2047, 2287
MalI	GATC	4 cut(s)	465, 998, 1839, 2036
MboI	GATC	4 cut(s)	463, 996, 1837, 2034
MfeI	CAATTG	2 cut(s)	897, 1800
MhlI	GDGCHC	2 cut(s)	1462, 1703
MlyI	GAGTC	4 cut(s)	278, 351, 457, 2071
MmeI	TCCRAC	1 cut(s)	240
MroXI	GAANNNNTTC	1 cut(s)	1374
MseI	TTAA	5 cut(s)	1104, 1713, 2121, 2135, 2271
MslI	CAYNNNNRTG	3 cut(s)	419, 645, 1656
MspA1I	CMGCKG	2 cut(s)	1787, 2233
MspCI	CTTAAG	1 cut(s)	1103
MspI	CCGG	8 cut(s)	120, 287, 432, 740, 1523, 1539, 1842, 2266
MspR9I	CCNGG	9 cut(s)	562, 740, 741, 1091, 1539, 1540, 1842, 1843, 2267
MunI	CAATTG	2 cut(s)	897, 1800
Mva1269I	GAATGC	1 cut(s)	477
MvaI	CCWGG	2 cut(s)	562, 1091
MvnI	CGCG	1 cut(s)	585
MwoI	GCNNNNNNNGC	9 cut(s)	148, 677, 743, 752, 986, 1277, 1301, 1584, 1805
NciI	CCSGG	7 cut(s)	740, 741, 1539, 1540, 1842, 1843, 2267
NcoI	CCATGG	1 cut(s)	228
NdeII	GATC	4 cut(s)	463, 996, 1837, 2034
NlaIII	CATG	7 cut(s)	232, 650, 926, 1340, 1627, 1655, 2018
NlaIV	GGNNCC	6 cut(s)	320, 559, 738, 866, 1579, 1700
NmeAIII	GCCGAG	2 cut(s)	168, 339
NmuCI	GTSAC	7 cut(s)	115, 624, 1138, 1179, 1220, 1876, 2287
PaeR7I	CTCGAG	1 cut(s)	726
PceI	AGGCCT	1 cut(s)	307
PciSI	GCTCTTC	1 cut(s)	130
PctI	GAATGC	1 cut(s)	477
PdmI	GAANNNNTTC	1 cut(s)	1374
PfeI	GAWTC	6 cut(s)	64, 237, 635, 1079, 1370, 1598
PflMI	CCANNNNNTGG	1 cut(s)	492
PleI	GAGTC	4 cut(s)	277, 351, 456, 2070
PmaCI	CACGTG	1 cut(s)	632
PmlI	CACGTG	1 cut(s)	632
PpsI	GAGTC	4 cut(s)	277, 351, 456, 2070
Ppu21I	YACGTR	1 cut(s)	632
PsiI	TTATAA	1 cut(s)	2169
Psp1406I	AACGTT	1 cut(s)	1938
Psp6I	CCWGG	2 cut(s)	560, 1089
PspCI	CACGTG	1 cut(s)	632
PspFI	CCCAGC	1 cut(s)	1271
PspGI	CCWGG	2 cut(s)	560, 1089
PspN4I	GGNNCC	6 cut(s)	320, 559, 738, 866, 1579, 1700
PspPI	GGNCC	4 cut(s)	736, 959, 1490, 1577
PspXI	VCTCGAGB	1 cut(s)	726
PsrI	GAACNNNNNNTAC	2 cut(s)	1049, 1081
PstI	CTGCAG	1 cut(s)	1708
PvuII	CAGCTG	2 cut(s)	1787, 2233
RsaI	GTAC	6 cut(s)	212, 386, 761, 1088, 1438, 2020
RsaNI	GTAC	6 cut(s)	211, 385, 760, 1087, 1437, 2019
RseI	CAYNNNNRTG	3 cut(s)	419, 645, 1656
SapI	GCTCTTC	1 cut(s)	130
SaqAI	TTAA	5 cut(s)	1104, 1713, 2121, 2135, 2271
Sau3AI	GATC	4 cut(s)	463, 996, 1837, 2034
Sau96I	GGNCC	4 cut(s)	736, 959, 1490, 1577
SchI	GAGTC	4 cut(s)	278, 351, 457, 2071
ScrFI	CCNGG	9 cut(s)	562, 740, 741, 1091, 1539, 1540, 1842, 1843, 2267
SduI	GDGCHC	2 cut(s)	1462, 1703
SfaNI	GCATC	1 cut(s)	160
SfcI	CTRYAG	1 cut(s)	1704
SfiI	GGCCNNNNNGGCC	1 cut(s)	1584
Sfr274I	CTCGAG	1 cut(s)	726
SinI	GGWCC	2 cut(s)	959, 1490
SlaI	CTCGAG	1 cut(s)	726
SmaI	CCCGGG	3 cut(s)	741, 1540, 1843
SmiMI	CAYNNNNRTG	3 cut(s)	419, 645, 1656
SmlI	CTYRAG	4 cut(s)	108, 266, 726, 1103
SmoI	CTYRAG	4 cut(s)	108, 266, 726, 1103
SseBI	AGGCCT	1 cut(s)	307
SsiI	CCGC	5 cut(s)	202, 1244, 1326, 1482, 1865
SspI	AATATT	1 cut(s)	1166
SspMI	CTAG	6 cut(s)	1022, 1313, 1404, 1419, 1485, 1602
StuI	AGGCCT	1 cut(s)	307
StyD4I	CCNGG	9 cut(s)	560, 738, 739, 1089, 1537, 1538, 1840, 1841, 2265
StyI	CCWWGG	2 cut(s)	228, 992
TaaI	ACNGT	3 cut(s)	685, 1006, 1441
TaiI	ACGT	3 cut(s)	634, 1941, 2058
TaqI	TCGA	4 cut(s)	9, 62, 727, 910
TaqII	GACCGA	4 cut(s)	1041, 1239, 1426, 1507
TatI	WGTACW	2 cut(s)	210, 759
TauI	GCSGC	2 cut(s)	205, 1867
TfiI	GAWTC	6 cut(s)	64, 237, 635, 1079, 1370, 1598
Tru1I	TTAA	5 cut(s)	1104, 1713, 2121, 2135, 2271
Tru9I	TTAA	5 cut(s)	1104, 1713, 2121, 2135, 2271
TscAI	CASTG	4 cut(s)	762, 921, 1588, 1663
TseFI	GTSAC	7 cut(s)	115, 624, 1138, 1179, 1220, 1876, 2287
Tsp45I	GTSAC	7 cut(s)	115, 624, 1138, 1179, 1220, 1876, 2287
TspDTI	ATGAA	3 cut(s)	582, 999, 1979
TspGWI	ACGGA	3 cut(s)	795, 1074, 1190
TspMI	CCCGGG	3 cut(s)	739, 1538, 1841
TspRI	CASTG	4 cut(s)	762, 921, 1588, 1663
Van91I	CCANNNNNTGG	1 cut(s)	492
Vha464I	CTTAAG	1 cut(s)	1103
VpaK11BI	GGWCC	2 cut(s)	959, 1490
XapI	RAATTY	6 cut(s)	347, 501, 927, 1612, 1914, 2245
XbaI	TCTAGA	1 cut(s)	1601
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1048, 2080
XhoI	CTCGAG	1 cut(s)	726
XmaI	CCCGGG	3 cut(s)	739, 1538, 1841
XmiI	GTMKAC	1 cut(s)	837
XmnI	GAANNNNTTC	1 cut(s)	1374
XspI	CTAG	6 cut(s)	1022, 1313, 1404, 1419, 1485, 1602

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.