Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0006915

Physical Location & Seq

Genomic Coordinates Forward (+)

18577044 .. 18581575

Gene Structure 4532 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2295 bp

ATGGCGCCAAATCCAAGGGTGAACGCAGCCTTTAAAGCAATGGCAGAGCTTGGTATTAATGAAAAACAGGTCAAACCAGTTTTGAAAAATCTCTTGAGATTATTTGACAAAAACTGGGAACTGATTGAAGAAGAGAATTATAGAGTTCTTGTAGATGCTATATTTGATGCGGAGGATACTCAGGGGTTGGAAGAGAAGAAGGAGAAGAAGAAAAGCAAGAACTATGATGAGGAAGATATGGAAGAAGAGCCTCAGCTGCGTCGTGAACCTGCTCGTCCCTCGAAAAGGATACATTCAAGTGGTGATGAGGGTTCATCACTGAAGAAGAAATCTACAAATACTGATCTGGAGGATAATATTGGGGAAGAATTGCCACTGCCTCATCAACCTGAACGTCCCCTGAAAAGGTTGCGAAAAACCCATGGGGGTCAACTTTCACCATCCCCAAGTACCTGCAACCCTCTGTTGGGTGGGCCTTTATTGATAAGGCCAAAAGTGGAGAAAGATGAGTTACTTACACGGTCACCTGACTCAAGGGCTGAATTGCATCAACCAGTTTCACCCCACCTTAGTGACAAAAATAAGGGCAAGCAACCTGTTGTGTCTAATCCCGTGCCACAGCATGGAAAGCGAATTACTGAGTCAGGCATCGTTCTTTTGCCGAAACATAGGGTTGACAATCATCAATTAATGAAGCCTAAAGATGAGCCCTTCACTGATGACATGGCACAAGATGAGGTTCCTATAGCAGTCATCCTTCCAGATCCCTCGAGTAAAGAAAAACCCCCACTCCAAAATGGTGCAACTGGGGAACAAAATGATCAAGAACCTGTGGCATCCCAGGAGAGAGAAAGTACAAGAAATGATATTGTATCTTCATCTAATGAGAGGAATACGAACTTTGAACTTGCAACCTTAGAAGAGGAATCTTCTAATTTAGAAGTTGCGTCTTCACCCTTAGGAGAGGATGGATCTATAAGTGCATCACCAAATCTTGATGCATTGAAAAAAACTACTGCTCGGGATTCTGTGCATGGAACTAAGGAAACATTATGCATGCAGCCAAGTTCTTTGAATGGGCCTGTTGGTATTGAATGCCCTACTGCTGTTACTGCTCCTGAAATTCCCAGACTACCCTTGTCTCTGAATGGTGTTGGTGAATGCAGACAAGCAGGTGAGAGGGCTGATTCTAATGGTTTTGCTGAGGTTGATAAGGAAGGTGAACTGGAAGACTCTCGTGGTCTGGTTGTTGTACAACATTGTGATCTACCTCCTGATGATTTAAGGAGTTATCATGACATTGATGACATAACCAAAGGGGAAGAAAGAGTCAAAATACCATGGGTAAATGAAAAAAACAATGAATATCCACCATCCTTCTTCTATATCTCCCGAAGCCTTGTTTTCCAAGATGCTGCTATTAACCTCCGTCTTTCTGGTATTGGGGATGCAAATTGCTGCCCAACTTGCTTTGGTGATTGCCTATCGGCGTCTGTACCTTGTGCTTGTGCATCTCAGACTGAGGGGGATTTTGCTTACACGCAAGAAGGCCTTCTAAAGGATGATTTCCTGGAAGAGTGTATCTCTATGATTCGCAACCCTCAACAACACCGTCCTTTCTATTGTAAAAGCTGCCCACTTGAAAGAGTTAAGAATGATGATTGTTTAGAACCATGCAAGGGCCACTTAAGGAGGCAATTTATTAAAGAATGCTGGAGTAAGTGTGGCTGCCATAGACAGTGTGGAAATCGAGTGGTCCAGAGAGGCTTAAATTGCAAATTGCAGGTGTTTTTCACTTCTGAAGGAAAAGGATGGGGTCTCCGAACCTTGGAGGACCTGCCAAAAGGTGCCTTTGTGTGTGAGTATGTTGGAGAAGTTTTAACCAGCAAAGAGTTACATGAGAGGAACATTAAAAGCTCCAGAAGTGGCAAACGTCCCTATCCAGTGCGACTGGATGCAAATTGGGCTTCCAAAGCAGATTTGAGGGATAAAGAAGCTCTCTGTTTGGATGCTACAAACTATGGAAATGTTGCTAGGTTTATTAATCACAGATGTCTGGATGCAAACTTGGTTGAAATCCCAGTTGAAGTGGAGACCCCAGATCATTGCAACTATCATCTTGCCTTTTTCACAACAAGAAAAGTAGATGCCTTGGAAGAGCTAACCTGGGATTATGGGATTGACTTCGACGACCATGATCATCATGTGAAGGTGTTCCAGTGCCAATGTGGCAGCAAATTCTGCAGGAACATGAAACGTTCAAATAGATCTAGACCTGGATCAATTGCAAGGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

765

Amino Acids

85.66

Weight (kDa)

5.56

Isoelectric Point (pI)

53.21

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	6 - 59	1.5e-23	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	439 - 584	3.4e-12	Pre-SET motif
SET	PF00856	604 - 726	8e-20	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20650 FvH4_2g20650 FvH4_2g20650
malus_domestica	MD00G1060700.v1.1
prunus_persica	Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1
pyrus_communis	pycom05g17400 pycom10g15310
rosa_chinensis	RchiOBHm_Chr6g0286831
rosa_laevigata	RLG00000012533
rosa_multiflora	Rmu_ssc0000279.1_g000009
rosa_roxburghii	Rroxscaffold_7G00181890
rosa_rugosa	Rorug06G0183800 Rorug06G0183900 Rorug06G0183900 Rorug06G0183900
rosa_samantha	Rh6AG295900 Rh6BG300200 Rh6CG308100 Rh6DG291900
rosa_wichuraiana	Rw6G025510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	2 cut(s)	1163, 1774
Acc36I	ACCTGC	5 cut(s)	277, 461, 1163, 1774, 1845
AccB1I	GGYRCC	2 cut(s)	4, 1847
AccB7I	CCANNNNNTGG	1 cut(s)	623
AciI	CCGC	1 cut(s)	170
AclI	AACGTT	1 cut(s)	2257
AclWI	GGATC	3 cut(s)	758, 979, 2287
AcsI	RAATTY	2 cut(s)	1122, 2237
AcuI	CTGAAG	2 cut(s)	341, 1821
AcyI	GRCGYC	2 cut(s)	5, 1490
AfaI	GTAC	4 cut(s)	451, 856, 1254, 1497
AfiI	CCNNNNNNNGG	8 cut(s)	285, 405, 466, 467, 623, 1558, 1679, 1828
AflII	CTTAAG	1 cut(s)	1687
AjnI	CCWGG	4 cut(s)	840, 1569, 2165, 2275
AleI	CACNNNNGTG	1 cut(s)	570
AluBI	AGCT	6 cut(s)	49, 256, 1632, 1917, 1997, 2161
AluI	AGCT	6 cut(s)	49, 256, 1632, 1917, 1997, 2161
Alw26I	GTCTC	3 cut(s)	1146, 1823, 2087
AlwI	GGATC	3 cut(s)	758, 979, 2287
Ama87I	CYCGRG	2 cut(s)	769, 1020
AoxI	GGCC	5 cut(s)	473, 488, 1079, 1549, 1681
ApeKI	GCWGC	8 cut(s)	26, 256, 1060, 1415, 1458, 1632, 1728, 2232
ApoI	RAATTY	2 cut(s)	1122, 2237
AseI	ATTAAT	3 cut(s)	57, 689, 2043
Asp700I	GAANNNNTTC	2 cut(s)	1551, 2213
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	5 cut(s)	473, 1079, 1681, 1756, 1834
AvaI	CYCGRG	2 cut(s)	769, 1020
AvaII	GGWCC	2 cut(s)	1756, 1834
AxyI	CCTNAGG	1 cut(s)	958
BanI	GGYRCC	2 cut(s)	4, 1847
BanII	GRGCYC	1 cut(s)	711
BauI	CACGAG	1 cut(s)	1236
BbsI	GAAGAC	2 cut(s)	942, 1236
BbvCI	CCTCAGC	2 cut(s)	252, 1203
BbvI	GCAGC	8 cut(s)	38, 243, 1072, 1402, 1445, 1619, 1715, 2244
BccI	CCATC	4 cut(s)	448, 962, 1381, 1806
BciT130I	CCWGG	4 cut(s)	842, 1571, 2167, 2277
BciVI	GTATCC	2 cut(s)	169, 282
BclI	TGATCA	2 cut(s)	820, 2197
BcoDI	GTCTC	3 cut(s)	1146, 1823, 2087
BfaI	CTAG	2 cut(s)	2034, 2271
BfmI	CTRYAG	2 cut(s)	744, 2242
BfoI	RGCGCY	1 cut(s)	8
BfrI	CTTAAG	1 cut(s)	1687
BfuAI	ACCTGC	5 cut(s)	277, 461, 1163, 1774, 1845
BfuI	GTATCC	2 cut(s)	169, 282
BglI	GCCNNNNNGGC	1 cut(s)	2229
BglII	AGATCT	1 cut(s)	2267
BisI	GCNGC	8 cut(s)	27, 257, 1061, 1416, 1459, 1633, 1729, 2233
BlsI	GCNGC	8 cut(s)	28, 258, 1062, 1417, 1460, 1634, 1730, 2234
Bme1390I	CCNGG	4 cut(s)	842, 1571, 2167, 2277
Bme18I	GGWCC	2 cut(s)	1756, 1834
BmeT110I	CYCGRG	2 cut(s)	769, 1020
BmgT120I	GGNCC	5 cut(s)	473, 1079, 1681, 1756, 1834
BmiI	GGNNCC	3 cut(s)	6, 741, 1849
BmrFI	CCNGG	4 cut(s)	842, 1571, 2167, 2277
BmrI	ACTGGG	3 cut(s)	124, 816, 2075
BmuI	ACTGGG	3 cut(s)	124, 816, 2075
BpiI	GAAGAC	2 cut(s)	942, 1236
BplI	GAGNNNNNCTC	2 cut(s)	1568, 1600
BpmI	CTGGAG	3 cut(s)	368, 1735, 1903
Bpu10I	CCTNAGC	2 cut(s)	252, 1203
BpuEI	CTTGAG	2 cut(s)	115, 517
BsaHI	GRCGYC	2 cut(s)	5, 1490
BsaI	GGTCTC	2 cut(s)	1823, 2087
BsaJI	CCNNGG	7 cut(s)	14, 421, 840, 1340, 1827, 2151, 2166
BsaXI	ACNNNNNCTCC	4 cut(s)	774, 804, 1708, 1738
Bsc4I	CCNNNNNNNGG	8 cut(s)	285, 405, 466, 467, 623, 1558, 1679, 1828
Bse1I	ACTGG	9 cut(s)	77, 119, 554, 811, 1230, 1943, 1956, 2081, 2218
Bse21I	CCTNAGG	1 cut(s)	958
Bse3DI	GCAATG	2 cut(s)	45, 2104
BseBI	CCWGG	4 cut(s)	842, 1571, 2167, 2277
BseDI	CCNNGG	7 cut(s)	14, 421, 840, 1340, 1827, 2151, 2166
BseLI	CCNNNNNNNGG	8 cut(s)	285, 405, 466, 467, 623, 1558, 1679, 1828
BseMI	GCAATG	2 cut(s)	45, 2104
BseMII	CTCAG	6 cut(s)	194, 266, 630, 1194, 1512, 1529
BseNI	ACTGG	9 cut(s)	77, 119, 554, 811, 1230, 1943, 1956, 2081, 2218
BseXI	GCAGC	8 cut(s)	38, 243, 1072, 1402, 1445, 1619, 1715, 2244
BshFI	GGCC	5 cut(s)	475, 490, 1081, 1551, 1683
BshNI	GGYRCC	2 cut(s)	4, 1847
BsiHKCI	CYCGRG	2 cut(s)	769, 1020
BslFI	GGGAC	3 cut(s)	261, 381, 1920
BslI	CCNNNNNNNGG	8 cut(s)	285, 405, 466, 467, 623, 1558, 1679, 1828
BsmAI	GTCTC	3 cut(s)	1146, 1823, 2087
BsmFI	GGGAC	3 cut(s)	261, 381, 1920
BsmI	GAATGC	3 cut(s)	1100, 1166, 1715
BsnI	GGCC	5 cut(s)	475, 490, 1081, 1551, 1683
Bso31I	GGTCTC	2 cut(s)	1823, 2087
BsoBI	CYCGRG	2 cut(s)	769, 1020
Bsp1286I	GDGCHC	1 cut(s)	711
Bsp1407I	TGTACA	1 cut(s)	1252
Bsp143I	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
Bsp19I	CCATGG	2 cut(s)	421, 1340
BspACI	CCGC	1 cut(s)	170
BspANI	GGCC	5 cut(s)	475, 490, 1081, 1551, 1683
BspCNI	CTCAG	6 cut(s)	193, 265, 631, 1195, 1513, 1528
BspHI	TCATGA	1 cut(s)	1294
BspLI	GGNNCC	3 cut(s)	6, 741, 1849
BspMAI	CTGCAG	1 cut(s)	2246
BspMI	ACCTGC	5 cut(s)	277, 461, 1163, 1774, 1845
BspPI	GGATC	3 cut(s)	758, 979, 2287
BspQI	GCTCTTC	2 cut(s)	240, 2151
BspT107I	GGYRCC	2 cut(s)	4, 1847
BspTI	CTTAAG	1 cut(s)	1687
BspTNI	GGTCTC	2 cut(s)	1823, 2087
BsrDI	GCAATG	2 cut(s)	45, 2104
BsrGI	TGTACA	1 cut(s)	1252
BsrI	ACTGG	9 cut(s)	77, 119, 554, 811, 1230, 1943, 1956, 2081, 2218
BssECI	CCNNGG	7 cut(s)	14, 421, 840, 1340, 1827, 2151, 2166
BssMI	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
BssNI	GRCGYC	2 cut(s)	5, 1490
BssSI	CACGAG	1 cut(s)	1236
BssT1I	CCWWGG	5 cut(s)	14, 421, 1340, 1827, 2151
Bst2BI	CACGAG	1 cut(s)	1236
Bst2UI	CCWGG	4 cut(s)	842, 1571, 2167, 2277
Bst4CI	ACNGT	3 cut(s)	522, 1613, 1740
Bst6I	CTCTTC	6 cut(s)	126, 186, 240, 915, 1569, 2151
BstACI	GRCGYC	2 cut(s)	5, 1490
BstAFI	CTTAAG	1 cut(s)	1687
BstAPI	GCANNNNNTGC	1 cut(s)	2241
BstAUI	TGTACA	1 cut(s)	1252
BstC8I	GCNNGC	2 cut(s)	590, 1058
BstDSI	CCRYGG	2 cut(s)	421, 1340
BstEII	GGTNACC	1 cut(s)	522
BstENI	CCTNNNNNAGG	2 cut(s)	283, 1556
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstKTI	GATC	9 cut(s)	346, 766, 823, 974, 1267, 2104, 2200, 2270, 2282
BstMAI	GTCTC	3 cut(s)	1146, 1823, 2087
BstMBI	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
BstNI	CCWGG	4 cut(s)	842, 1571, 2167, 2277
BstNSI	RCATGY	1 cut(s)	1060
BstPI	GGTNACC	1 cut(s)	522
BstSCI	CCNGG	4 cut(s)	840, 1569, 2165, 2275
BstSFI	CTRYAG	2 cut(s)	744, 2242
BstV1I	GCAGC	8 cut(s)	38, 243, 1072, 1402, 1445, 1619, 1715, 2244
BstV2I	GAAGAC	2 cut(s)	942, 1236
BstX2I	RGATCY	3 cut(s)	763, 971, 2267
BstYI	RGATCY	3 cut(s)	763, 971, 2267
Bsu36I	CCTNAGG	1 cut(s)	958
BsuI	GTATCC	2 cut(s)	169, 282
BsuRI	GGCC	5 cut(s)	475, 490, 1081, 1551, 1683
BtgI	CCRYGG	2 cut(s)	421, 1340
BtsI	GCAGTG	1 cut(s)	374
BtsIMutI	CAGTG	6 cut(s)	317, 374, 714, 1745, 1950, 2225
BveI	ACCTGC	5 cut(s)	277, 461, 1163, 1774, 1845
Cac8I	GCNNGC	2 cut(s)	590, 1058
CciI	TCATGA	1 cut(s)	1294
CfoI	GCGC	1 cut(s)	7
Cfr13I	GGNCC	5 cut(s)	473, 1079, 1681, 1756, 1834
CseI	GACGC	3 cut(s)	248, 936, 1479
Csp6I	GTAC	4 cut(s)	450, 855, 1253, 1496
CviQI	GTAC	4 cut(s)	450, 855, 1253, 1496
DinI	GGCGCC	1 cut(s)	6
DpnI	GATC	9 cut(s)	345, 765, 822, 973, 1266, 2103, 2199, 2269, 2281
DpnII	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
DraI	TTTAAA	1 cut(s)	34
Eam1104I	CTCTTC	6 cut(s)	126, 186, 240, 915, 1569, 2151
EarI	CTCTTC	6 cut(s)	126, 186, 240, 915, 1569, 2151
Eco130I	CCWWGG	5 cut(s)	14, 421, 1340, 1827, 2151
Eco147I	AGGCCT	1 cut(s)	1551
Eco24I	GRGCYC	1 cut(s)	711
Eco31I	GGTCTC	2 cut(s)	1823, 2087
Eco47I	GGWCC	2 cut(s)	1756, 1834
Eco57I	CTGAAG	2 cut(s)	341, 1821
Eco81I	CCTNAGG	1 cut(s)	958
Eco88I	CYCGRG	2 cut(s)	769, 1020
Eco91I	GGTNACC	1 cut(s)	522
EcoNI	CCTNNNNNAGG	2 cut(s)	283, 1556
EcoO109I	RGGNCCY	1 cut(s)	1834
EcoO65I	GGTNACC	1 cut(s)	522
EcoRII	CCWGG	4 cut(s)	840, 1569, 2165, 2275
EcoT14I	CCWWGG	5 cut(s)	14, 421, 1340, 1827, 2151
EcoT22I	ATGCAT	2 cut(s)	1003, 1058
EcoT38I	GRGCYC	1 cut(s)	711
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	5 cut(s)	14, 421, 1340, 1827, 2151
FalI	AAGNNNNNCTT	4 cut(s)	1536, 1568, 1670, 1702
FaqI	GGGAC	3 cut(s)	261, 381, 1920
FbaI	TGATCA	2 cut(s)	820, 2197
Fnu4HI	GCNGC	8 cut(s)	27, 257, 1061, 1416, 1459, 1633, 1729, 2233
FriOI	GRGCYC	1 cut(s)	711
Fsp4HI	GCNGC	8 cut(s)	27, 257, 1061, 1416, 1459, 1633, 1729, 2233
FspBI	CTAG	2 cut(s)	2034, 2271
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	8 cut(s)	27, 257, 1061, 1416, 1459, 1633, 1729, 2233
GsuI	CTGGAG	3 cut(s)	368, 1735, 1903
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	5 cut(s)	475, 490, 1081, 1551, 1683
HgaI	GACGC	3 cut(s)	248, 936, 1479
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 1490
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	431, 676
HindII	GTYRAC	2 cut(s)	431, 676
HinfI	GANTC	8 cut(s)	530, 641, 926, 1025, 1187, 1232, 1329, 1591
Hpy166II	GTNNAC	5 cut(s)	22, 266, 431, 676, 1223
Hpy188I	TCNGA	4 cut(s)	1146, 1518, 1801, 1823
Hpy8I	GTNNAC	5 cut(s)	22, 266, 431, 676, 1223
Hpy99I	CGWCG	2 cut(s)	264, 2192
HpyAV	CCTTC	9 cut(s)	193, 721, 767, 1211, 1387, 1541, 1562, 1796, 2203
HpyCH4III	ACNGT	3 cut(s)	522, 1613, 1740
HpyCH4IV	ACGT	3 cut(s)	394, 1933, 2257
HpySE526I	ACGT	3 cut(s)	394, 1933, 2257
Hsp92I	GRCGYC	2 cut(s)	5, 1490
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	2 cut(s)	820, 2197
Kzo9I	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
LguI	GCTCTTC	2 cut(s)	240, 2151
LmnI	GCTCC	2 cut(s)	1120, 1922
Lsp1109I	GCAGC	8 cut(s)	38, 243, 1072, 1402, 1445, 1619, 1715, 2244
MaeI	CTAG	2 cut(s)	2034, 2271
MaeII	ACGT	3 cut(s)	394, 1933, 2257
MaeIII	GTNAC	5 cut(s)	510, 522, 572, 1108, 1893
MalI	GATC	9 cut(s)	345, 765, 822, 973, 1266, 2103, 2199, 2269, 2281
MboI	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
MfeI	CAATTG	1 cut(s)	2283
MflI	RGATCY	3 cut(s)	763, 971, 2267
MhlI	GDGCHC	1 cut(s)	711
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	4 cut(s)	524, 650, 1226, 1338
MmeI	TCCRAC	2 cut(s)	168, 1849
Mph1103I	ATGCAT	2 cut(s)	1003, 1058
MroXI	GAANNNNTTC	2 cut(s)	1551, 2213
MslI	CAYNNNNRTG	2 cut(s)	297, 570
MspA1I	CMGCKG	1 cut(s)	256
MspCI	CTTAAG	1 cut(s)	1687
MspR9I	CCNGG	4 cut(s)	842, 1571, 2167, 2277
MunI	CAATTG	1 cut(s)	2283
Mva1269I	GAATGC	3 cut(s)	1100, 1166, 1715
MvaI	CCWGG	4 cut(s)	842, 1571, 2167, 2277
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	2 cut(s)	421, 1340
NdeII	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
NlaIV	GGNNCC	3 cut(s)	6, 741, 1849
NmuCI	GTSAC	2 cut(s)	522, 572
NsiI	ATGCAT	2 cut(s)	1003, 1058
NspI	RCATGY	1 cut(s)	1060
OliI	CACNNNNGTG	1 cut(s)	570
PaeI	GCATGC	1 cut(s)	1060
PaeR7I	CTCGAG	1 cut(s)	769
PagI	TCATGA	1 cut(s)	1294
PaqCI	CACCTGC	2 cut(s)	1163, 1774
PceI	AGGCCT	1 cut(s)	1551
PciSI	GCTCTTC	2 cut(s)	240, 2151
PctI	GAATGC	3 cut(s)	1100, 1166, 1715
PdmI	GAANNNNTTC	2 cut(s)	1551, 2213
PfeI	GAWTC	4 cut(s)	926, 1025, 1187, 1591
PflMI	CCANNNNNTGG	1 cut(s)	623
PfoI	TCCNGGA	1 cut(s)	1569
PkrI	GCNGC	8 cut(s)	28, 258, 1062, 1417, 1460, 1634, 1730, 2234
PleI	GAGTC	4 cut(s)	524, 649, 1226, 1337
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	4 cut(s)	524, 649, 1226, 1337
PpuMI	RGGWCCY	1 cut(s)	1834
PshBI	ATTAAT	3 cut(s)	57, 689, 2043
Psp1406I	AACGTT	1 cut(s)	2257
Psp5II	RGGWCCY	1 cut(s)	1834
Psp6I	CCWGG	4 cut(s)	840, 1569, 2165, 2275
PspEI	GGTNACC	1 cut(s)	522
PspGI	CCWGG	4 cut(s)	840, 1569, 2165, 2275
PspN4I	GGNNCC	3 cut(s)	6, 741, 1849
PspPI	GGNCC	5 cut(s)	473, 1079, 1681, 1756, 1834
PspPPI	RGGWCCY	1 cut(s)	1834
PspXI	VCTCGAGB	1 cut(s)	769
PstI	CTGCAG	1 cut(s)	2246
PsuI	RGATCY	3 cut(s)	763, 971, 2267
PvuII	CAGCTG	1 cut(s)	256
RsaI	GTAC	4 cut(s)	451, 856, 1254, 1497
RsaNI	GTAC	4 cut(s)	450, 855, 1253, 1496
RseI	CAYNNNNRTG	2 cut(s)	297, 570
SapI	GCTCTTC	2 cut(s)	240, 2151
SatI	GCNGC	8 cut(s)	27, 257, 1061, 1416, 1459, 1633, 1729, 2233
Sau3AI	GATC	9 cut(s)	343, 763, 820, 971, 1264, 2101, 2197, 2267, 2279
Sau96I	GGNCC	5 cut(s)	473, 1079, 1681, 1756, 1834
SchI	GAGTC	4 cut(s)	524, 650, 1226, 1338
ScrFI	CCNGG	4 cut(s)	842, 1571, 2167, 2277
SduI	GDGCHC	1 cut(s)	711
SfcI	CTRYAG	2 cut(s)	744, 2242
SfoI	GGCGCC	1 cut(s)	6
Sfr274I	CTCGAG	1 cut(s)	769
SinI	GGWCC	2 cut(s)	1756, 1834
SlaI	CTCGAG	1 cut(s)	769
SmiMI	CAYNNNNRTG	2 cut(s)	297, 570
SmlI	CTYRAG	4 cut(s)	94, 532, 769, 1687
SmoI	CTYRAG	4 cut(s)	94, 532, 769, 1687
SphI	GCATGC	1 cut(s)	1060
SseBI	AGGCCT	1 cut(s)	1551
SsiI	CCGC	1 cut(s)	170
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	358
SspMI	CTAG	2 cut(s)	2034, 2271
StuI	AGGCCT	1 cut(s)	1551
StyD4I	CCNGG	4 cut(s)	840, 1569, 2165, 2275
StyI	CCWWGG	5 cut(s)	14, 421, 1340, 1827, 2151
TaaI	ACNGT	3 cut(s)	522, 1613, 1740
TaiI	ACGT	3 cut(s)	397, 1936, 2260
TaqI	TCGA	4 cut(s)	281, 770, 1750, 2187
TatI	WGTACW	2 cut(s)	854, 1252
TfiI	GAWTC	4 cut(s)	926, 1025, 1187, 1591
TscAI	CASTG	6 cut(s)	324, 381, 721, 1745, 1950, 2225
TseFI	GTSAC	2 cut(s)	522, 572
TseI	GCWGC	8 cut(s)	26, 256, 1060, 1415, 1458, 1632, 1728, 2232
Tsp45I	GTSAC	2 cut(s)	522, 572
TspDTI	ATGAA	7 cut(s)	75, 303, 707, 867, 1365, 1377, 2267
TspGWI	ACGGA	1 cut(s)	1418
TspRI	CASTG	6 cut(s)	324, 381, 721, 1745, 1950, 2225
Van91I	CCANNNNNTGG	1 cut(s)	623
Vha464I	CTTAAG	1 cut(s)	1687
VpaK11BI	GGWCC	2 cut(s)	1756, 1834
VspI	ATTAAT	3 cut(s)	57, 689, 2043
XagI	CCTNNNNNAGG	2 cut(s)	283, 1556
XapI	RAATTY	2 cut(s)	1122, 2237
XbaI	TCTAGA	1 cut(s)	2270
XceI	RCATGY	1 cut(s)	1060
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1739, 2225
XhoI	CTCGAG	1 cut(s)	769
XmnI	GAANNNNTTC	2 cut(s)	1551, 2213
XspI	CTAG	2 cut(s)	2034, 2271
Zsp2I	ATGCAT	2 cut(s)	1003, 1058

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.