Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6D

Orthogroup ID

OG0006915

Physical Location & Seq

Genomic Coordinates Forward (+)

48985631 .. 48993053

Gene Structure 7423 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6DG291900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2109 bp

ATGGCGCCACCAAGTCCACAAGTTTCGAAAGCCTTTCGTGCAATGGCAGCTATTGGTATTAGTGAACAACAGGTGAAACCAGTTTTAAAGAATCTCTTGAGGTTGTATAACAGAGATTGGTCACTGATTGAAGCAGAGGAATATAGAGCTCTCGCTGATGCTATATTTGAGGCAGAAGATGCTAAGGTTGCAGCAGAAAAGAAGAAATGCAACAATTATGATCAGGAAGATATGGAAGCAGAATCACATCCACACCACGAACCTGAACTTCCGTTGACGAGGTTACGTTCAAGAAGTCAAGATGAGAGTCCATCACAGAAGAAGAAATCTTTAGATGATGAACCGGTGGACAATATAGAGGAAGATTTCTCCGTTCCTCATCGTCCCTTGAAAAGGTTACGCCTACAAAATCATGAGTGTCAGGTGTCACCTTCCTCAAATACCTGCAATCCTACGTCTGGTGGTAGTTTGCTCATAAAGCCAAAAGTGGAAGCAGAGGAACTACTTGACACTCGTTCTGCACAACAGCCCCAAAATACTTCACATTCACCTGAGTCAAGGCCACCGGTTTCTCCTCATTCTGGTATTAAAGATAAGGGCAAGCAACCTCTTATATCTAAACCTTTGGCACTGCAAGGGAAGAGTTTATCGGAAAGATCATCTAATGGTGTTCGCTTTAAAGAGACAGCGGTTGAACCAGGGATCATTCTTATGCCTAAACAGAATGTTAACAGTTTAGCATTAATCACGCCTAAAGATGAGCCCTTCACTGATGACATGGCCCAAGACGAGGTTCCTATTGCCATGATCCATCCAGATGAATCAGATAATGTACACCGTCCTCTATTGACAGAAGGTGCGACTGGGAAGCAACATGATGAACCCGTGGCTTCCCAAGAGAGAGAAAGTAGAAATGATACTCCAGTTTTATCTAATGAGGGGAGTATGAATGATGGGCTTGCAACTATTCCAGAGGGCTCTCCTTCTAACTTGGGGGAATCTTCTTGCTTAGAGGTTGCCTCATCACCTTCAGGAGAGGATGGATCAATTAATGTAGCACCAAATCTTGATTCATTGCAAAGATCTCCTGCTTGGGATGCTGTGGGTGGAAATAAGGAAACACTTTGCATGCAGTCATGTGCTTTGAACGGGCCTGTTATTATGGATTGCCCCAGTCCAGTTACTGATCCTGAAGTGCCAAGAATTCCCTTCACTTTGAATGGTAATTGTGCACAAGTCTCTGGTACTGTTGTTTCTAATGGTTTTTCTGAGGATAATGTGGATGAGTCCCTGAGTCTGGTGGTTGTTCAAAACTCTGATCTAACTCCTGATGATCTAAGGACTATTCATGATATAAATGATATAGCTAGAGGAGAAGAAAGAGTCAAAATATCGTGGGTAAATGAAAGGAGCAGGGATCGTCCACCATCCTTCTTCTATATCTCCAAAAACCTTGTCTTCAAAGATGCTGATCTTAAAATATGTCTCTCTAGCATTGAGGAAAAGAATTGCTGTGCAACTTGCTTTGGTGATTGTGTATCAGCGTCTATACCTTGTGCATGTGCATATCAAACTGGGGGTAAGTTTGCTTACACACCAGAAGGCCTCATTAAAGACGATCTATTGGAAGAGTGTATCTCTATGACTCGTAATCCGCAACCACACCATCTCTTCTACTGTAAGAACTGCCCGCTTGAAAGAATAAAGAATGACGATTGTTTAGAGCCATGCAAAGGCCATTTAAGGAGGAATTTCATTAAAGAATGCTGGGTTAAATGTGGCTGCCATGGGCAATGTGGCAACAGGGTGGTCCAGAGAGGCTTGAATTGCAACTTGCAGGTCTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGAACCTTAGATGGCCTGCCTAAAGGTGCATTTGTGTGTGAGTTTGTTGGTGAAATATTAACCAACAAAGAGCGGCACCAAAGGAAAATCCAAAGCACCAGAAGTGGGAGACGTCCTTATCCGGTATTACTCGATGCAGATTGGGGTAGTAAAGCCAATCTGAGGGATGAAGAAGCTCTCTGTTTGGATGCGACAAAATATGGAAATGTTGCTAGGTTTATTAATCACAGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

702

Amino Acids

77.57

Weight (kDa)

5.36

Isoelectric Point (pI)

57.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	8 - 60	1.8e-20	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	457 - 602	3.4e-10	Pre-SET motif
SET	PF00856	622 - 701	9.3e-09	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0006915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20650 FvH4_2g20650 FvH4_2g20650
malus_domestica	MD00G1060700.v1.1
prunus_persica	Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1
pyrus_communis	pycom05g17400 pycom10g15310
rosa_chinensis	RchiOBHm_Chr6g0286831
rosa_laevigata	RLG00000012533
rosa_multiflora	Rmu_ssc0000279.1_g000009
rosa_roxburghii	Rroxscaffold_7G00181890
rosa_rugosa	Rorug06G0183800 Rorug06G0183900 Rorug06G0183900 Rorug06G0183900
rosa_samantha	Rh6AG295900 Rh6BG300200 Rh6CG308100 Rh6DG291900
rosa_wichuraiana	Rw6G025510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1990
Acc36I	ACCTGC	2 cut(s)	452, 1828
AccB1I	GGYRCC	2 cut(s)	4, 1950
AccBSI	CCGCTC	1 cut(s)	1948
AciI	CCGC	4 cut(s)	689, 1655, 1691, 1948
AclWI	GGATC	5 cut(s)	710, 802, 1051, 1181, 1425
AcsI	RAATTY	2 cut(s)	1203, 1750
AcuI	CTGAAG	3 cut(s)	1014, 1212, 1836
AcyI	GRCGYC	2 cut(s)	5, 1987
AfaI	GTAC	2 cut(s)	834, 1246
AfiI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1297, 1733, 1980, 2037
AgeI	ACCGGT	2 cut(s)	343, 565
AjnI	CCWGG	1 cut(s)	697
AjuI	GAANNNNNNNTTGG	4 cut(s)	777, 809, 1054, 1086
AluBI	AGCT	4 cut(s)	50, 149, 1367, 2051
AluI	AGCT	4 cut(s)	50, 149, 1367, 2051
Alw21I	GWGCWC	2 cut(s)	151, 1234
Alw26I	GTCTC	4 cut(s)	677, 1243, 1490, 1978
Alw44I	GTGCAC	1 cut(s)	1230
AlwI	GGATC	5 cut(s)	710, 802, 1051, 1181, 1425
AlwNI	CAGNNNCTG	1 cut(s)	1184
AoxI	GGCC	6 cut(s)	560, 780, 1151, 1603, 1735, 1888
ApaLI	GTGCAC	1 cut(s)	1230
ApeKI	GCWGC	3 cut(s)	47, 191, 1782
ApoI	RAATTY	2 cut(s)	1203, 1750
ArsI	GACNNNNNNTTYG	2 cut(s)	1440, 1472
AseI	ATTAAT	3 cut(s)	743, 1050, 2097
AsiGI	ACCGGT	2 cut(s)	343, 565
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	781, 1151, 1810
AsuHPI	GGTGA	6 cut(s)	85, 420, 540, 1017, 1541, 1937
AsuII	TTCGAA	2 cut(s)	26, 1876
AvaII	GGWCC	1 cut(s)	1810
BaeGI	GKGCMC	1 cut(s)	1234
BaeI	ACNNNNGTAYC	4 cut(s)	909, 942, 1236, 1269
BanI	GGYRCC	2 cut(s)	4, 1950
BanII	GRGCYC	3 cut(s)	151, 765, 980
BbsI	GAAGAC	2 cut(s)	1450, 1865
Bbv12I	GWGCWC	2 cut(s)	151, 1234
BbvI	GCAGC	3 cut(s)	59, 203, 1769
BccI	CCATC	8 cut(s)	319, 819, 947, 1034, 1435, 1674, 1860, 1880
BciT130I	CCWGG	1 cut(s)	699
BclI	TGATCA	1 cut(s)	220
BcoDI	GTCTC	4 cut(s)	677, 1243, 1490, 1978
BfaI	CTAG	3 cut(s)	1368, 1491, 2088
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	452, 1828
BglII	AGATCT	1 cut(s)	1082
BisI	GCNGC	4 cut(s)	48, 192, 1783, 1949
BlsI	GCNGC	4 cut(s)	49, 193, 1784, 1950
Bme1390I	CCNGG	1 cut(s)	699
Bme18I	GGWCC	1 cut(s)	1810
BmgT120I	GGNCC	3 cut(s)	781, 1151, 1810
BmiI	GGNNCC	3 cut(s)	6, 795, 1952
BmrFI	CCNGG	1 cut(s)	699
BmrI	ACTGGG	3 cut(s)	873, 1167, 1584
BmsI	GCATC	6 cut(s)	148, 169, 1087, 1456, 1999, 2053
BmuI	ACTGGG	3 cut(s)	873, 1167, 1584
BpiI	GAAGAC	2 cut(s)	1450, 1865
BplI	GAGNNNNNCTC	4 cut(s)	1004, 1036, 1622, 1654
BpmI	CTGGAG	1 cut(s)	906
Bpu10I	CCTNAGC	1 cut(s)	183
Bpu14I	TTCGAA	2 cut(s)	26, 1876
BpuEI	CTTGAG	1 cut(s)	118
BsaBI	GATNNNNATC	1 cut(s)	1470
BsaHI	GRCGYC	2 cut(s)	5, 1987
BsaJI	CCNNGG	3 cut(s)	698, 885, 1786
BsaWI	WCCGGW	3 cut(s)	343, 565, 1996
Bsc4I	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1297, 1733, 1980, 2037
Bse118I	RCCGGY	2 cut(s)	343, 565
Bse1I	ACTGG	6 cut(s)	80, 868, 923, 1173, 1178, 1579
Bse3DI	GCAATG	3 cut(s)	48, 1073, 1799
Bse8I	GATNNNNATC	1 cut(s)	1470
BseBI	CCWGG	1 cut(s)	699
BseDI	CCNNGG	3 cut(s)	698, 885, 1786
BseGI	GGATG	9 cut(s)	247, 811, 1045, 1102, 1288, 1427, 1871, 2047, 2068
BseJI	GATNNNNATC	1 cut(s)	1470
BseLI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1297, 1733, 1980, 2037
BseMI	GCAATG	3 cut(s)	48, 1073, 1799
BseMII	CTCAG	4 cut(s)	543, 1260, 1283, 2027
BseNI	ACTGG	6 cut(s)	80, 868, 923, 1173, 1178, 1579
BseRI	GAGGAG	2 cut(s)	564, 1386
BseSI	GKGCMC	1 cut(s)	1234
BseXI	GCAGC	3 cut(s)	59, 203, 1769
BseYI	CCCAGC	1 cut(s)	1767
BsgI	GTGCAG	1 cut(s)	504
BshFI	GGCC	6 cut(s)	562, 782, 1153, 1605, 1737, 1890
BshNI	GGYRCC	2 cut(s)	4, 1950
BshTI	ACCGGT	2 cut(s)	343, 565
BsiHKAI	GWGCWC	2 cut(s)	151, 1234
BsiSI	CCGG	3 cut(s)	344, 566, 1997
BslFI	GGGAC	2 cut(s)	369, 1273
BslI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1297, 1733, 1980, 2037
BsmAI	GTCTC	4 cut(s)	677, 1243, 1490, 1978
BsmBI	CGTCTC	1 cut(s)	1978
BsmFI	GGGAC	2 cut(s)	369, 1273
BsmI	GAATGC	1 cut(s)	1769
BsnI	GGCC	6 cut(s)	562, 782, 1153, 1605, 1737, 1890
Bsp119I	TTCGAA	2 cut(s)	26, 1876
Bsp1286I	GDGCHC	4 cut(s)	151, 765, 980, 1234
Bsp1407I	TGTACA	1 cut(s)	832
Bsp19I	CCATGG	1 cut(s)	1786
BspACI	CCGC	4 cut(s)	689, 1655, 1691, 1948
BspANI	GGCC	6 cut(s)	562, 782, 1153, 1605, 1737, 1890
BspCNI	CTCAG	4 cut(s)	544, 1261, 1284, 2028
BspHI	TCATGA	2 cut(s)	412, 1348
BspLI	GGNNCC	3 cut(s)	6, 795, 1952
BspMI	ACCTGC	2 cut(s)	452, 1828
BspPI	GGATC	5 cut(s)	710, 802, 1051, 1181, 1425
BspT104I	TTCGAA	2 cut(s)	26, 1876
BspT107I	GGYRCC	2 cut(s)	4, 1950
BsrBI	CCGCTC	1 cut(s)	1948
BsrDI	GCAATG	3 cut(s)	48, 1073, 1799
BsrFI	RCCGGY	2 cut(s)	343, 565
BsrGI	TGTACA	1 cut(s)	832
BsrI	ACTGG	6 cut(s)	80, 868, 923, 1173, 1178, 1579
BssAI	RCCGGY	2 cut(s)	343, 565
BssECI	CCNNGG	3 cut(s)	698, 885, 1786
BssNI	GRCGYC	2 cut(s)	5, 1987
BssT1I	CCWWGG	1 cut(s)	1786
Bst2UI	CCWGG	1 cut(s)	699
Bst4CI	ACNGT	4 cut(s)	734, 839, 1249, 1679
Bst6I	CTCTTC	3 cut(s)	635, 1623, 1676
BstACI	GRCGYC	2 cut(s)	5, 1987
BstAPI	GCANNNNNTGC	1 cut(s)	179
BstAUI	TGTACA	1 cut(s)	832
BstBI	TTCGAA	2 cut(s)	26, 1876
BstC8I	GCNNGC	5 cut(s)	602, 960, 1130, 1691, 1892
BstDEI	CTNAG	8 cut(s)	183, 552, 1009, 1269, 1292, 1337, 1882, 2036
BstDSI	CCRYGG	2 cut(s)	885, 1786
BstENI	CCTNNNNNAGG	1 cut(s)	391
BstF5I	GGATG	9 cut(s)	247, 811, 1045, 1102, 1288, 1427, 1871, 2047, 2068
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	4 cut(s)	677, 1243, 1490, 1978
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1097, 1827
BstNI	CCWGG	1 cut(s)	699
BstNSI	RCATGY	2 cut(s)	1132, 1563
BstSCI	CCNGG	1 cut(s)	697
BstSLI	GKGCMC	1 cut(s)	1234
BstV1I	GCAGC	3 cut(s)	59, 203, 1769
BstV2I	GAAGAC	2 cut(s)	1450, 1865
BstX2I	RGATCY	1 cut(s)	1082
BstYI	RGATCY	1 cut(s)	1082
BsuRI	GGCC	6 cut(s)	562, 782, 1153, 1605, 1737, 1890
BtgI	CCRYGG	2 cut(s)	885, 1786
BtsCI	GGATG	9 cut(s)	247, 811, 1045, 1102, 1288, 1427, 1871, 2047, 2068
BtsI	GCAGTG	1 cut(s)	629
BtsIMutI	CAGTG	3 cut(s)	122, 629, 768
BveI	ACCTGC	2 cut(s)	452, 1828
Cac8I	GCNNGC	5 cut(s)	602, 960, 1130, 1691, 1892
CaiI	CAGNNNCTG	1 cut(s)	1184
CciI	TCATGA	2 cut(s)	412, 1348
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	2 cut(s)	343, 565
Cfr13I	GGNCC	3 cut(s)	781, 1151, 1810
CseI	GACGC	1 cut(s)	1533
Csp6I	GTAC	2 cut(s)	833, 1245
CspAI	ACCGGT	2 cut(s)	343, 565
CviQI	GTAC	2 cut(s)	833, 1245
DdeI	CTNAG	8 cut(s)	183, 552, 1009, 1269, 1292, 1337, 1882, 2036
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	87, 679
Eam1104I	CTCTTC	3 cut(s)	635, 1623, 1676
EarI	CTCTTC	3 cut(s)	635, 1623, 1676
Ecl136II	GAGCTC	1 cut(s)	149
Eco130I	CCWWGG	1 cut(s)	1786
Eco147I	AGGCCT	1 cut(s)	1605
Eco24I	GRGCYC	3 cut(s)	151, 765, 980
Eco47I	GGWCC	1 cut(s)	1810
Eco53kI	GAGCTC	1 cut(s)	149
Eco57I	CTGAAG	3 cut(s)	1014, 1212, 1836
EcoICRI	GAGCTC	1 cut(s)	149
EcoNI	CCTNNNNNAGG	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	1203
EcoRII	CCWGG	1 cut(s)	697
EcoT14I	CCWWGG	1 cut(s)	1786
EcoT38I	GRGCYC	3 cut(s)	151, 765, 980
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	1 cut(s)	1786
Esp3I	CGTCTC	1 cut(s)	1978
FalI	AAGNNNNNCTT	2 cut(s)	80, 112
FaqI	GGGAC	2 cut(s)	369, 1273
FauI	CCCGC	1 cut(s)	1698
FbaI	TGATCA	1 cut(s)	220
Fnu4HI	GCNGC	4 cut(s)	48, 192, 1783, 1949
FokI	GGATG	9 cut(s)	234, 798, 1052, 1109, 1295, 1414, 1878, 2054, 2075
FriOI	GRGCYC	3 cut(s)	151, 765, 980
Fsp4HI	GCNGC	4 cut(s)	48, 192, 1783, 1949
FspBI	CTAG	3 cut(s)	1368, 1491, 2088
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	4 cut(s)	48, 192, 1783, 1949
GsaI	CCCAGC	1 cut(s)	1771
GsuI	CTGGAG	1 cut(s)	906
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	562, 782, 1153, 1605, 1737, 1890
HapII	CCGG	3 cut(s)	344, 566, 1997
HgaI	GACGC	1 cut(s)	1533
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 1987
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	276, 730
HindII	GTYRAC	2 cut(s)	276, 730
HpaI	GTTAAC	1 cut(s)	730
HpaII	CCGG	3 cut(s)	344, 566, 1997
HphI	GGTGA	6 cut(s)	85, 420, 540, 1017, 1541, 1937
Hpy166II	GTNNAC	8 cut(s)	17, 65, 276, 349, 730, 835, 1232, 1424
Hpy188I	TCNGA	6 cut(s)	652, 826, 1270, 1318, 1855, 2037
Hpy8I	GTNNAC	8 cut(s)	17, 65, 276, 349, 730, 835, 1232, 1424
HpyAV	CCTTC	9 cut(s)	441, 775, 848, 993, 1038, 1219, 1441, 1595, 1850
HpyCH4III	ACNGT	4 cut(s)	734, 839, 1249, 1679
HpyCH4IV	ACGT	3 cut(s)	286, 455, 1987
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1097, 1827
HpyF3I	CTNAG	8 cut(s)	183, 552, 1009, 1269, 1292, 1337, 1882, 2036
HpySE526I	ACGT	3 cut(s)	286, 455, 1987
Hsp92I	GRCGYC	2 cut(s)	5, 1987
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	220
KspAI	GTTAAC	1 cut(s)	730
LmnI	GCTCC	1 cut(s)	1410
Lsp1109I	GCAGC	3 cut(s)	59, 203, 1769
LweI	GCATC	6 cut(s)	148, 169, 1087, 1456, 1999, 2053
MaeI	CTAG	3 cut(s)	1368, 1491, 2088
MaeII	ACGT	3 cut(s)	286, 455, 1987
MaeIII	GTNAC	5 cut(s)	120, 282, 396, 426, 1180
MbiI	CCGCTC	1 cut(s)	1948
MflI	RGATCY	1 cut(s)	1082
MhlI	GDGCHC	4 cut(s)	151, 765, 980, 1234
MluCI	AATT	7 cut(s)	214, 1047, 1203, 1225, 1507, 1750, 1825
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	6 cut(s)	316, 563, 1295, 1303, 1392, 1639
MslI	CAYNNNNRTG	3 cut(s)	710, 816, 1909
MspA1I	CMGCKG	1 cut(s)	689
MspI	CCGG	3 cut(s)	344, 566, 1997
MspR9I	CCNGG	1 cut(s)	699
Mva1269I	GAATGC	1 cut(s)	1769
MvaI	CCWGG	1 cut(s)	699
MwoI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1097, 1827
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1786
NlaIV	GGNNCC	3 cut(s)	6, 795, 1952
NmuCI	GTSAC	2 cut(s)	120, 426
NspI	RCATGY	2 cut(s)	1132, 1563
NspV	TTCGAA	2 cut(s)	26, 1876
PaeI	GCATGC	1 cut(s)	1132
PagI	TCATGA	2 cut(s)	412, 1348
PceI	AGGCCT	1 cut(s)	1605
PctI	GAATGC	1 cut(s)	1769
PfeI	GAWTC	5 cut(s)	91, 242, 821, 998, 1070
PinAI	ACCGGT	2 cut(s)	343, 565
PkrI	GCNGC	4 cut(s)	49, 193, 1784, 1950
PleI	GAGTC	6 cut(s)	315, 562, 1294, 1302, 1391, 1639
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	6 cut(s)	315, 562, 1294, 1302, 1391, 1639
PshBI	ATTAAT	3 cut(s)	743, 1050, 2097
Psp124BI	GAGCTC	1 cut(s)	151
Psp6I	CCWGG	1 cut(s)	697
PspFI	CCCAGC	1 cut(s)	1767
PspGI	CCWGG	1 cut(s)	697
PspN4I	GGNNCC	3 cut(s)	6, 795, 1952
PspPI	GGNCC	3 cut(s)	781, 1151, 1810
PstNI	CAGNNNCTG	1 cut(s)	1184
PsuI	RGATCY	1 cut(s)	1082
RsaI	GTAC	2 cut(s)	834, 1246
RsaNI	GTAC	2 cut(s)	833, 1245
RseI	CAYNNNNRTG	3 cut(s)	710, 816, 1909
SacI	GAGCTC	1 cut(s)	151
SatI	GCNGC	4 cut(s)	48, 192, 1783, 1949
Sau96I	GGNCC	3 cut(s)	781, 1151, 1810
SchI	GAGTC	6 cut(s)	316, 563, 1295, 1303, 1392, 1639
ScrFI	CCNGG	1 cut(s)	699
SduI	GDGCHC	4 cut(s)	151, 765, 980, 1234
SfaNI	GCATC	6 cut(s)	148, 169, 1087, 1456, 1999, 2053
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	2 cut(s)	26, 1876
SinI	GGWCC	1 cut(s)	1810
SmiMI	CAYNNNNRTG	3 cut(s)	710, 816, 1909
SmlI	CTYRAG	1 cut(s)	97
SmoI	CTYRAG	1 cut(s)	97
SphI	GCATGC	1 cut(s)	1132
Sse9I	AATT	7 cut(s)	214, 1047, 1203, 1225, 1507, 1750, 1825
SseBI	AGGCCT	1 cut(s)	1605
SsiI	CCGC	4 cut(s)	689, 1655, 1691, 1948
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	1932
SspMI	CTAG	3 cut(s)	1368, 1491, 2088
SstI	GAGCTC	1 cut(s)	151
StuI	AGGCCT	1 cut(s)	1605
StyD4I	CCNGG	1 cut(s)	697
StyI	CCWWGG	1 cut(s)	1786
TaaI	ACNGT	4 cut(s)	734, 839, 1249, 1679
TaiI	ACGT	3 cut(s)	289, 458, 1990
TaqI	TCGA	3 cut(s)	26, 1876, 2007
TasI	AATT	7 cut(s)	214, 1047, 1203, 1225, 1507, 1750, 1825
TatI	WGTACW	1 cut(s)	832
TauI	GCSGC	1 cut(s)	1951
TfiI	GAWTC	5 cut(s)	91, 242, 821, 998, 1070
TscAI	CASTG	3 cut(s)	129, 636, 775
TseFI	GTSAC	2 cut(s)	120, 426
TseI	GCWGC	3 cut(s)	47, 191, 1782
Tsp45I	GTSAC	2 cut(s)	120, 426
TspDTI	ATGAA	9 cut(s)	354, 834, 894, 962, 1062, 1337, 1419, 1744, 2058
TspGWI	ACGGA	2 cut(s)	261, 361
TspRI	CASTG	3 cut(s)	129, 636, 775
VneI	GTGCAC	1 cut(s)	1230
VpaK11BI	GGWCC	1 cut(s)	1810
VspI	ATTAAT	3 cut(s)	743, 1050, 2097
XagI	CCTNNNNNAGG	1 cut(s)	391
XapI	RAATTY	2 cut(s)	1203, 1750
XceI	RCATGY	2 cut(s)	1132, 1563
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1793
XspI	CTAG	3 cut(s)	1368, 1491, 2088
ZraI	GACGTC	1 cut(s)	1988

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.