Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_ssc0000279.1

Orthogroup ID

OG0006915

Physical Location & Seq

Genomic Coordinates Forward (+)

54704 .. 60114

Gene Structure 5411 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_ssc0000279.1_g000009.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2550 bp

atggcgccaccaagtccacaagtttcgaaagcctttcgtgcaatggcagctattggtattagtgaacaacaggtgaaaccagttttaaagaatctcttgaggttgtataacagagattggtcactgattgaagcagaggaatatagagctctcgctgatgctatatttgaggcagaagatgctaaggttgcagcagaaaagaagaaatgcaacaattatgatgaagatatggaagtagaatcacatccacaccatgaacctgaacttccgttgacgaggttacgttcaagaagtcaagatgagagtccatcacagaagaagaaatctttagatgatgaaccggtggacaatatagaggaagatttctctgttcctcatcgtcccttgaaaaggttacgcctacaaaatcatgagtgtcaggtgccaccttcctcaaatacctgcaatcctacgtctggtggtagtttgctcataaagccaaaagtggaagcagaggaactacttgacactcgttctacacaacagccccaaaatacttcacattcacctgagtcaaggccaccggtttctcctcattctggtattaaagataagggcaagcaacctcttatatctaaacctttggtactgcaagggaagagtttatcggaaagatcatctaatggtgttcgctttaaagagacagcagttgaaccagggatcattcttatgcctaaacagaatgttaacagtttagcattaatcacgcctaaagatgagcccttcactgatgacatggcccaagacgaggttcctattgccatgatccatccagatgaatcagataatgtacaccgtcctctattgacagaaggtgcgactggaaagcaacatgatgaacccgtggcttcccaagagagagaaagtagaaatgatactccagttttatctaatgaggggagtatgaatgatgagctcgcaactattccagagggctctccttctaacttgggggaatcttcttgcttagaggttgcctcatcaccttcaggagaggtaaagctttctctgagttgcagttcagctattggaagaccaggctttcatatgcctaatctagatgcaattctaaaattgacggaggaaaaatgtctgcacacatacaaaatcattgaccctaagttctctttgaaaaatctgttgggacatatgtgtgagagcttcttggaattggcaactaattctaatgatgaatcacaggatggatcaattaatgtagcaccaaatcttgattcattgcaaagatctcctgcttgggatgctgtgggtggaaataaggaaacactttccatgcagtcatgtgctttgagcgggcctgttattatggattgccccagtccagttactgatcctgaagtgccaagaattcccttcactttgaatggtaattgtgcacaagtctctggtactgttgtttctaatggtttttctgaggataatgtggatgagtccctgagtctggtggttgttcaaaactctgatctaactcctgatgatctaaggactattcatgatataaatgatatagctagaggagaagaaagagtcaaaatatcgtgggtaaatgaaaggagcagggatcgtccaccatccttcttctatatctccaaaaaccttgtcttcaaagatgctgatcttaaaatatgtctctctagcattgaggaaaagaattgctgtgcaacttgctttggtgattgtgtatcagcgtctataccttgtgcatgtgcatatcaaactgggggtaagtttgcttacacaccagaaggcctcattaaagacgatctgttggaagagtgtatctctatgactcgtaatccgcaaccacaccatctcttctactgtaagaactgcccgcttgaaagaataaagaatgacgattgtttagagccatgcaaaggccatttaaggaggaatttcattaaggaatgctgggttaaatgtggctgccatgggcaatgtggcaacagggtggtccagagaggcttgaattgcaacttgcaggtcttttttacttcagaaggaaaaggatggggtcttcgaaccttagatggcctgcctaaaggtgcatttgtgtgtgagtttgttggtgaaatattaaccaacaaagagcggcaccgaaggaaaatccaaagcaccagaagtgggagacgtccttatccggtattactcgatgcagattggggtagtaaagccaatctgagggatgaagaagctctcagtttggatgcgacaaaatatggaaatgttgctaggtttattaatcacagatgtttggatgcaaacttggttccgatccctgtcgaagtcgagactcctgatcgtcgcttttatcatgttgctttcttcaccacaagaaaagtagatgccttggaagagcttacatgggattatggcattgactttgacgaccatgatgatcctgttaaggtgttcaactgccaatgtggcagtaaattctgcaggagtatgacacgttcaaatagatcaagatcggcctcacttgcaagatga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

849

Amino Acids

94.38

Weight (kDa)

5.46

Isoelectric Point (pI)

55.17

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20650 FvH4_2g20650 FvH4_2g20650
malus_domestica	MD00G1060700.v1.1
prunus_persica	Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1
pyrus_communis	pycom05g17400 pycom10g15310
rosa_chinensis	RchiOBHm_Chr6g0286831
rosa_laevigata	RLG00000012533
rosa_multiflora	Rmu_ssc0000279.1_g000009
rosa_roxburghii	Rroxscaffold_7G00181890
rosa_rugosa	Rorug06G0183800 Rorug06G0183900 Rorug06G0183900 Rorug06G0183900
rosa_samantha	Rh6AG295900 Rh6BG300200 Rh6CG308100 Rh6DG291900
rosa_wichuraiana	Rw6G025510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2191
Acc36I	ACCTGC	2 cut(s)	449, 2029
AccB1I	GGYRCC	3 cut(s)	4, 421, 2151
AccBSI	CCGCTC	2 cut(s)	1350, 2149
AciI	CCGC	4 cut(s)	1350, 1856, 1892, 2149
AclWI	GGATC	7 cut(s)	707, 799, 1252, 1382, 1626, 2326, 2450
AcsI	RAATTY	3 cut(s)	1404, 1951, 2492
AcuI	CTGAAG	3 cut(s)	1011, 1413, 2037
AcyI	GRCGYC	2 cut(s)	5, 2188
AfaI	GTAC	3 cut(s)	627, 831, 1447
AfiI	CCNNNNNNNGG	8 cut(s)	390, 455, 578, 787, 1498, 1934, 2181, 2238
AflIII	ACRYGT	1 cut(s)	2510
AgeI	ACCGGT	2 cut(s)	340, 562
AjnI	CCWGG	2 cut(s)	694, 1075
AjuI	GAANNNNNNNTTGG	6 cut(s)	774, 806, 1163, 1195, 1255, 1287
AluBI	AGCT	9 cut(s)	50, 149, 955, 1042, 1064, 1200, 1568, 2252, 2416
AluI	AGCT	9 cut(s)	50, 149, 955, 1042, 1064, 1200, 1568, 2252, 2416
Alw21I	GWGCWC	3 cut(s)	151, 957, 1435
Alw26I	GTCTC	5 cut(s)	674, 1444, 1691, 2179, 2342
Alw44I	GTGCAC	1 cut(s)	1431
AlwI	GGATC	7 cut(s)	707, 799, 1252, 1382, 1626, 2326, 2450
AlwNI	CAGNNNCTG	1 cut(s)	1385
AoxI	GGCC	7 cut(s)	557, 777, 1352, 1804, 1936, 2089, 2532
ApaLI	GTGCAC	1 cut(s)	1431
ApeKI	GCWGC	3 cut(s)	47, 191, 1983
ApoI	RAATTY	3 cut(s)	1404, 1951, 2492
ArsI	GACNNNNNNTTYG	2 cut(s)	1641, 1673
AseI	ATTAAT	3 cut(s)	740, 1251, 2298
AsiGI	ACCGGT	2 cut(s)	340, 562
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	778, 1352, 2011
AsuHPI	GGTGA	6 cut(s)	85, 537, 1014, 1742, 2138, 2377
AsuII	TTCGAA	2 cut(s)	26, 2077
AvaII	GGWCC	1 cut(s)	2011
BaeGI	GKGCMC	1 cut(s)	1435
BaeI	ACNNNNGTAYC	4 cut(s)	906, 939, 1437, 1470
BanI	GGYRCC	3 cut(s)	4, 421, 2151
BanII	GRGCYC	4 cut(s)	151, 762, 957, 977
BbsI	GAAGAC	3 cut(s)	1078, 1651, 2066
Bbv12I	GWGCWC	3 cut(s)	151, 957, 1435
BbvI	GCAGC	3 cut(s)	59, 203, 1970
BccI	CCATC	7 cut(s)	316, 816, 1235, 1636, 1875, 2061, 2081
BciT130I	CCWGG	2 cut(s)	696, 1077
BcoDI	GTCTC	5 cut(s)	674, 1444, 1691, 2179, 2342
BfaI	CTAG	4 cut(s)	1097, 1569, 1692, 2289
BfmI	CTRYAG	1 cut(s)	2497
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	449, 2029
BglI	GCCNNNNNGGC	1 cut(s)	2484
BglII	AGATCT	1 cut(s)	1283
BisI	GCNGC	4 cut(s)	48, 192, 1984, 2150
BlsI	GCNGC	4 cut(s)	49, 193, 1985, 2151
Bme1390I	CCNGG	2 cut(s)	696, 1077
Bme18I	GGWCC	1 cut(s)	2011
BmgT120I	GGNCC	3 cut(s)	778, 1352, 2011
BmiI	GGNNCC	5 cut(s)	6, 423, 792, 2153, 2328
BmrFI	CCNGG	2 cut(s)	696, 1077
BmrI	ACTGGG	2 cut(s)	1368, 1785
BmsI	GCATC	9 cut(s)	148, 169, 1090, 1288, 1657, 2200, 2254, 2305, 2392
BmuI	ACTGGG	2 cut(s)	1368, 1785
BpiI	GAAGAC	3 cut(s)	1078, 1651, 2066
BplI	GAGNNNNNCTC	4 cut(s)	1001, 1033, 1823, 1855
BpmI	CTGGAG	1 cut(s)	903
Bpu10I	CCTNAGC	1 cut(s)	183
Bpu14I	TTCGAA	2 cut(s)	26, 2077
BpuEI	CTTGAG	1 cut(s)	118
BsaBI	GATNNNNATC	2 cut(s)	1671, 2527
BsaHI	GRCGYC	2 cut(s)	5, 2188
BsaJI	CCNNGG	4 cut(s)	695, 882, 1987, 2406
BsaWI	WCCGGW	3 cut(s)	340, 562, 2197
Bsc4I	CCNNNNNNNGG	8 cut(s)	390, 455, 578, 787, 1498, 1934, 2181, 2238
Bse118I	RCCGGY	2 cut(s)	340, 562
Bse1I	ACTGG	6 cut(s)	80, 865, 920, 1374, 1379, 1780
Bse3DI	GCAATG	3 cut(s)	48, 1274, 2000
Bse8I	GATNNNNATC	2 cut(s)	1671, 2527
BseBI	CCWGG	2 cut(s)	696, 1077
BseDI	CCNNGG	4 cut(s)	695, 882, 1987, 2406
BseJI	GATNNNNATC	2 cut(s)	1671, 2527
BseLI	CCNNNNNNNGG	8 cut(s)	390, 455, 578, 787, 1498, 1934, 2181, 2238
BseMI	GCAATG	3 cut(s)	48, 1274, 2000
BseMII	CTCAG	6 cut(s)	540, 1040, 1461, 1484, 2228, 2269
BseNI	ACTGG	6 cut(s)	80, 865, 920, 1374, 1379, 1780
BseRI	GAGGAG	2 cut(s)	561, 1587
BseSI	GKGCMC	1 cut(s)	1435
BseXI	GCAGC	3 cut(s)	59, 203, 1970
BseYI	CCCAGC	1 cut(s)	1968
BsgI	GTGCAG	1 cut(s)	1118
BshFI	GGCC	7 cut(s)	559, 779, 1354, 1806, 1938, 2091, 2534
BshNI	GGYRCC	3 cut(s)	4, 421, 2151
BshTI	ACCGGT	2 cut(s)	340, 562
BsiHKAI	GWGCWC	3 cut(s)	151, 957, 1435
BsiSI	CCGG	3 cut(s)	341, 563, 2198
BslFI	GGGAC	3 cut(s)	366, 1197, 1474
BslI	CCNNNNNNNGG	8 cut(s)	390, 455, 578, 787, 1498, 1934, 2181, 2238
BsmAI	GTCTC	5 cut(s)	674, 1444, 1691, 2179, 2342
BsmBI	CGTCTC	1 cut(s)	2179
BsmFI	GGGAC	3 cut(s)	366, 1197, 1474
BsmI	GAATGC	1 cut(s)	1970
BsnI	GGCC	7 cut(s)	559, 779, 1354, 1806, 1938, 2091, 2534
Bsp119I	TTCGAA	2 cut(s)	26, 2077
Bsp1286I	GDGCHC	5 cut(s)	151, 762, 957, 977, 1435
Bsp1407I	TGTACA	1 cut(s)	829
Bsp19I	CCATGG	1 cut(s)	1987
BspACI	CCGC	4 cut(s)	1350, 1856, 1892, 2149
BspANI	GGCC	7 cut(s)	559, 779, 1354, 1806, 1938, 2091, 2534
BspCNI	CTCAG	6 cut(s)	541, 1041, 1462, 1485, 2229, 2268
BspHI	TCATGA	2 cut(s)	409, 1549
BspLI	GGNNCC	5 cut(s)	6, 423, 792, 2153, 2328
BspMAI	CTGCAG	1 cut(s)	2501
BspMI	ACCTGC	2 cut(s)	449, 2029
BspPI	GGATC	7 cut(s)	707, 799, 1252, 1382, 1626, 2326, 2450
BspQI	GCTCTTC	1 cut(s)	2406
BspT104I	TTCGAA	2 cut(s)	26, 2077
BspT107I	GGYRCC	3 cut(s)	4, 421, 2151
BsrBI	CCGCTC	2 cut(s)	1350, 2149
BsrDI	GCAATG	3 cut(s)	48, 1274, 2000
BsrFI	RCCGGY	2 cut(s)	340, 562
BsrGI	TGTACA	1 cut(s)	829
BsrI	ACTGG	6 cut(s)	80, 865, 920, 1374, 1379, 1780
BssAI	RCCGGY	2 cut(s)	340, 562
BssECI	CCNNGG	4 cut(s)	695, 882, 1987, 2406
BssNI	GRCGYC	2 cut(s)	5, 2188
BssT1I	CCWWGG	2 cut(s)	1987, 2406
Bst2UI	CCWGG	2 cut(s)	696, 1077
Bst4CI	ACNGT	4 cut(s)	731, 836, 1450, 1880
Bst6I	CTCTTC	4 cut(s)	632, 1824, 1877, 2406
BstACI	GRCGYC	2 cut(s)	5, 2188
BstAPI	GCANNNNNTGC	1 cut(s)	179
BstAUI	TGTACA	1 cut(s)	829
BstBI	TTCGAA	2 cut(s)	26, 2077
BstC8I	GCNNGC	5 cut(s)	599, 957, 1352, 1892, 2093
BstDSI	CCRYGG	2 cut(s)	882, 1987
BstENI	CCTNNNNNAGG	1 cut(s)	388
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	5 cut(s)	674, 1444, 1691, 2179, 2342
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 475, 1298, 2028, 2484, 2540
BstNI	CCWGG	2 cut(s)	696, 1077
BstNSI	RCATGY	1 cut(s)	1764
BstSCI	CCNGG	2 cut(s)	694, 1075
BstSFI	CTRYAG	1 cut(s)	2497
BstSLI	GKGCMC	1 cut(s)	1435
BstV1I	GCAGC	3 cut(s)	59, 203, 1970
BstV2I	GAAGAC	3 cut(s)	1078, 1651, 2066
BstX2I	RGATCY	1 cut(s)	1283
BstYI	RGATCY	1 cut(s)	1283
BsuRI	GGCC	7 cut(s)	559, 779, 1354, 1806, 1938, 2091, 2534
BtgI	CCRYGG	2 cut(s)	882, 1987
BtsIMutI	CAGTG	2 cut(s)	122, 765
BveI	ACCTGC	2 cut(s)	449, 2029
Cac8I	GCNNGC	5 cut(s)	599, 957, 1352, 1892, 2093
CaiI	CAGNNNCTG	1 cut(s)	1385
CciI	TCATGA	2 cut(s)	409, 1549
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	2 cut(s)	340, 562
Cfr13I	GGNCC	3 cut(s)	778, 1352, 2011
CseI	GACGC	1 cut(s)	1734
Csp6I	GTAC	3 cut(s)	626, 830, 1446
CspAI	ACCGGT	2 cut(s)	340, 562
CviQI	GTAC	3 cut(s)	626, 830, 1446
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	87, 676
Eam1104I	CTCTTC	4 cut(s)	632, 1824, 1877, 2406
EarI	CTCTTC	4 cut(s)	632, 1824, 1877, 2406
Ecl136II	GAGCTC	2 cut(s)	149, 955
Eco130I	CCWWGG	2 cut(s)	1987, 2406
Eco147I	AGGCCT	1 cut(s)	1806
Eco24I	GRGCYC	4 cut(s)	151, 762, 957, 977
Eco47I	GGWCC	1 cut(s)	2011
Eco53kI	GAGCTC	2 cut(s)	149, 955
Eco57I	CTGAAG	3 cut(s)	1011, 1413, 2037
EcoICRI	GAGCTC	2 cut(s)	149, 955
EcoNI	CCTNNNNNAGG	1 cut(s)	388
EcoRI	GAATTC	1 cut(s)	1404
EcoRII	CCWGG	2 cut(s)	694, 1075
EcoT14I	CCWWGG	2 cut(s)	1987, 2406
EcoT38I	GRGCYC	4 cut(s)	151, 762, 957, 977
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	1987, 2406
Esp3I	CGTCTC	1 cut(s)	2179
FalI	AAGNNNNNCTT	2 cut(s)	80, 112
FaqI	GGGAC	3 cut(s)	366, 1197, 1474
FauI	CCCGC	2 cut(s)	1343, 1899
FauNDI	CATATG	2 cut(s)	1086, 1188
Fnu4HI	GCNGC	4 cut(s)	48, 192, 1984, 2150
FriOI	GRGCYC	4 cut(s)	151, 762, 957, 977
Fsp4HI	GCNGC	4 cut(s)	48, 192, 1984, 2150
FspBI	CTAG	4 cut(s)	1097, 1569, 1692, 2289
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	4 cut(s)	48, 192, 1984, 2150
GsaI	CCCAGC	1 cut(s)	1972
GsuI	CTGGAG	1 cut(s)	903
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	559, 779, 1354, 1806, 1938, 2091, 2534
HapII	CCGG	3 cut(s)	341, 563, 2198
HgaI	GACGC	1 cut(s)	1734
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 2188
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	273, 727
HindII	GTYRAC	2 cut(s)	273, 727
HindIII	AAGCTT	1 cut(s)	1040
HpaI	GTTAAC	1 cut(s)	727
HpaII	CCGG	3 cut(s)	341, 563, 2198
HphI	GGTGA	6 cut(s)	85, 537, 1014, 1742, 2138, 2377
Hpy166II	GTNNAC	8 cut(s)	17, 65, 273, 346, 727, 832, 1433, 1625
Hpy188I	TCNGA	8 cut(s)	649, 823, 1050, 1471, 1519, 2056, 2238, 2331
Hpy8I	GTNNAC	8 cut(s)	17, 65, 273, 346, 727, 832, 1433, 1625
Hpy99I	CGWCG	1 cut(s)	2364
HpyCH4III	ACNGT	4 cut(s)	731, 836, 1450, 1880
HpyCH4IV	ACGT	4 cut(s)	283, 452, 2188, 2512
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 475, 1298, 2028, 2484, 2540
HpySE526I	ACGT	4 cut(s)	283, 452, 2188, 2512
Hsp92I	GRCGYC	2 cut(s)	5, 2188
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
KspAI	GTTAAC	1 cut(s)	727
LguI	GCTCTTC	1 cut(s)	2406
LmnI	GCTCC	1 cut(s)	1611
Lsp1109I	GCAGC	3 cut(s)	59, 203, 1970
LweI	GCATC	9 cut(s)	148, 169, 1090, 1288, 1657, 2200, 2254, 2305, 2392
MaeI	CTAG	4 cut(s)	1097, 1569, 1692, 2289
MaeII	ACGT	4 cut(s)	283, 452, 2188, 2512
MaeIII	GTNAC	4 cut(s)	120, 279, 393, 1381
MbiI	CCGCTC	2 cut(s)	1350, 2149
MflI	RGATCY	1 cut(s)	1283
MhlI	GDGCHC	5 cut(s)	151, 762, 957, 977, 1435
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	7 cut(s)	313, 560, 1496, 1504, 1593, 1840, 2344
MmeI	TCCRAC	1 cut(s)	1806
MslI	CAYNNNNRTG	4 cut(s)	707, 813, 1191, 2110
MspI	CCGG	3 cut(s)	341, 563, 2198
MspR9I	CCNGG	2 cut(s)	696, 1077
Mva1269I	GAATGC	1 cut(s)	1970
MvaI	CCWGG	2 cut(s)	696, 1077
MwoI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 475, 1298, 2028, 2484, 2540
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1987
NdeI	CATATG	2 cut(s)	1086, 1188
NlaIV	GGNNCC	5 cut(s)	6, 423, 792, 2153, 2328
NmuCI	GTSAC	1 cut(s)	120
NspI	RCATGY	1 cut(s)	1764
NspV	TTCGAA	2 cut(s)	26, 2077
PagI	TCATGA	2 cut(s)	409, 1549
PceI	AGGCCT	1 cut(s)	1806
PciSI	GCTCTTC	1 cut(s)	2406
PctI	GAATGC	1 cut(s)	1970
PfeI	GAWTC	6 cut(s)	91, 239, 818, 995, 1232, 1271
PinAI	ACCGGT	2 cut(s)	340, 562
PkrI	GCNGC	4 cut(s)	49, 193, 1985, 2151
PleI	GAGTC	7 cut(s)	312, 559, 1495, 1503, 1592, 1840, 2344
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	7 cut(s)	312, 559, 1495, 1503, 1592, 1840, 2344
PshBI	ATTAAT	3 cut(s)	740, 1251, 2298
Psp124BI	GAGCTC	2 cut(s)	151, 957
Psp6I	CCWGG	2 cut(s)	694, 1075
PspFI	CCCAGC	1 cut(s)	1968
PspGI	CCWGG	2 cut(s)	694, 1075
PspN4I	GGNNCC	5 cut(s)	6, 423, 792, 2153, 2328
PspPI	GGNCC	3 cut(s)	778, 1352, 2011
PsrI	GAACNNNNNNTAC	2 cut(s)	2497, 2529
PstI	CTGCAG	1 cut(s)	2501
PstNI	CAGNNNCTG	1 cut(s)	1385
PsuI	RGATCY	1 cut(s)	1283
RsaI	GTAC	3 cut(s)	627, 831, 1447
RsaNI	GTAC	3 cut(s)	626, 830, 1446
RseI	CAYNNNNRTG	4 cut(s)	707, 813, 1191, 2110
SacI	GAGCTC	2 cut(s)	151, 957
SapI	GCTCTTC	1 cut(s)	2406
SatI	GCNGC	4 cut(s)	48, 192, 1984, 2150
Sau96I	GGNCC	3 cut(s)	778, 1352, 2011
SchI	GAGTC	7 cut(s)	313, 560, 1496, 1504, 1593, 1840, 2344
ScrFI	CCNGG	2 cut(s)	696, 1077
SduI	GDGCHC	5 cut(s)	151, 762, 957, 977, 1435
SfaNI	GCATC	9 cut(s)	148, 169, 1090, 1288, 1657, 2200, 2254, 2305, 2392
SfcI	CTRYAG	1 cut(s)	2497
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	2 cut(s)	26, 2077
SinI	GGWCC	1 cut(s)	2011
SmiMI	CAYNNNNRTG	4 cut(s)	707, 813, 1191, 2110
SmlI	CTYRAG	1 cut(s)	97
SmoI	CTYRAG	1 cut(s)	97
SseBI	AGGCCT	1 cut(s)	1806
SsiI	CCGC	4 cut(s)	1350, 1856, 1892, 2149
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	2133
SspMI	CTAG	4 cut(s)	1097, 1569, 1692, 2289
SstI	GAGCTC	2 cut(s)	151, 957
StuI	AGGCCT	1 cut(s)	1806
StyD4I	CCNGG	2 cut(s)	694, 1075
StyI	CCWWGG	2 cut(s)	1987, 2406
TaaI	ACNGT	4 cut(s)	731, 836, 1450, 1880
TaiI	ACGT	4 cut(s)	286, 455, 2191, 2515
TaqI	TCGA	5 cut(s)	26, 2077, 2208, 2340, 2346
TatI	WGTACW	1 cut(s)	829
TauI	GCSGC	1 cut(s)	2152
TfiI	GAWTC	6 cut(s)	91, 239, 818, 995, 1232, 1271
TscAI	CASTG	2 cut(s)	129, 772
TseFI	GTSAC	1 cut(s)	120
TseI	GCWGC	3 cut(s)	47, 191, 1983
Tsp45I	GTSAC	1 cut(s)	120
TspGWI	ACGGA	2 cut(s)	258, 1133
TspRI	CASTG	2 cut(s)	129, 772
VneI	GTGCAC	1 cut(s)	1431
VpaK11BI	GGWCC	1 cut(s)	2011
VspI	ATTAAT	3 cut(s)	740, 1251, 2298
XagI	CCTNNNNNAGG	1 cut(s)	388
XapI	RAATTY	3 cut(s)	1404, 1951, 2492
XbaI	TCTAGA	1 cut(s)	1096
XceI	RCATGY	1 cut(s)	1764
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1994
XspI	CTAG	4 cut(s)	1097, 1569, 1692, 2289
ZraI	GACGTC	1 cut(s)	2189

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.