Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6C

Orthogroup ID

OG0006915

Physical Location & Seq

Genomic Coordinates Forward (+)

48967067 .. 48972629

Gene Structure 5563 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6CG308100.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGGCGCCACCAAGTCCACAAGTTTCGAAAGCCTTTCGTGCAATGGCAGCTATTGGTATTAGTGAACAACAGGTGAAACCAGTTTTAAAGAATCTCTTGAGGTTGTATAACAGAGATTGGTCACTGATTGAAGCAGAGGAATATAGAGCTCTCGCTGATGCTATATTTGAGGCAGAAGATGCTAAGGTTGCAGCAGAAAAGAAGAAATGCAACAATTATGATCAGGAAGATATGGAAGCAGAATCACATCCACACCACGAACCTGAACTTCCGTTGACGAGGTTACGTTCAAGAAGTCAAGATGAGAGTCCATCACAGAAGAAGAAATCTTTAGATGATGAACCGGTGGACAATATAGAGGAAGATTTCTCCGTTCCTCATCGTCCCTTGAAAAGGTTACGCCTACAAAATCATGAGTGTCAGGTGTCACCTTCCTCAAATACCTGCAATCCTACGTCTGGTGGTAGTTTGCTCATAAAGCCAAAAGTGGAAGCAGAGGAACTACTTGACACTCGTTCTGCACAACAGCCCCAAAATACTTCACATTCACCTGAGTCAAGGCCACCGGTTTCTCCTCATTCTGGTATTAAAGATAAGGGCAAGCAACCTCTTATATCTAAACCTTTGGCACTGCAAGGGAAGAGTTTATCGGAAAGATCATCTAATGGTGTTCGCTTTAAAGAGACAGCGGTTGAACCAGGGATCATTCTTATGCCTAAACAGAATGTTAACAGTTTAGCATTAATCACGCCTAAAGATGAGCCCTTCACTGATGACATGGCCCAAGACGAGGTTCCTATTGCCATGATCCATCCAGATGAATCAGATAATGTACACCGTCCTCTATTGACAGAAGGTGCGACTGGGAAGCAACATGATGAACCCGTGGCTTCCCAAGAGAGAGAAAGTAGAAATGATACTCCAGTTTTATCTAATGAGGGGAGTATGAATGATGGGCTTGCAACTATTCCAGAGGGCTCTCCTTCTAACTTGGGGGAATCTTCTTGCTTAGAGGTTGCCTCATCACCTTCAGGAGAGGTAAAGCTTTCTCTGAGTTGCAGTTCAGCTATTGGAAGACCAGGCTTTCATATGCCTAATCTAGATGCAATTCTAAAATTGACGGAGGAAAAATGTCTGCACACATACAAAATCATTGACCCTAAGTTCTCTTTGAAAAATCTGTTGGGACATATGTGTGAGAGCTTCTTGGAATTGGCAACTAATTCTAATGATGAATCACAGGATGGATCAATTAATGTAGCACCAAATCTTGATTCATTGCAAAGATCTCCTGCTTGGGATGCTGTGGGTGGAAATAAGGAAACACTTTGCATGCAGTCATGTGCTTTGAACGGGCCTGTTATTATGGATTGCCCCAGTCCAGTTACTGATCCTGAAGTGCCAAGAATTCCCTTCACTTTGAATGGTAATTGTGCACAAGTCTCTGGTACTGTTGTTTCTAATGGTTTTTCTGAGGATAATGTGGATGAGTCCCTGAGTCTGGTGGTTGTTCAAAACTCTGATCTAACTCCTGATGATCTAAGGACTATTCATGATATAAATGATATAGCTAGAGGAGAAGAAAGAGTCAAAATATCGTGGGTAAATGAAAGGAGCAGGGATCGTCCACCATCCTTCTTCTATATCTCCAAAAACCTTGTCTTCAAAGATGCTGATCTTAAAATATGTCTCTCTAGCATTGAGGAAAAGAATTGCTGTGCAACTTGCTTTGGTGATTGTGTATCAGCGTCTATACCTTGTGCATGTGCATATCAAACTGGGGGTAAGTTTGCTTACACACCAGAAGGCCTCATTAAAGACGATCTATTGGAAGAGTGTATCTCTATGACTCGTAATCCGCAACCACACCATCTCTTCTACTGTAAGAACTGCCCGCTTGAAAGAATAAAGAATGACGATTGTTTAGAGCCATGCAAAGGCCATTTAAGGAGGAATTTCATTAAAGAATGCTGGGTTAAATGTGGCTGCCATGGGCAATGTGGCAACAGGGTGGTCCAGAGAGGCTTGAATTGCAACTTGCAGGTCTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGAACCTTAGATGGCCTGCCTAAAGGTGCATTTGTGTGTGAGTTTGTTGGTGAAATATTAACCAACAAAGAGCGGCACCAAAGGAAAATCCAAAGCACCAGAAGTGGGAGACGTCCTTATCCGGTATTACTCGATGCAGATTGGGGTAGTAAAGCCAATCTGAGGGATGAAGAAGCTCTCTGTTTGGATGCGACAAAATATGGAAATGTTGCTAGGTTTATTAATCACAGATGTTTGGATGCAAACTTGGTTCCGATCCCTGTCGACGTCGAGACTCCTGATCGTCGCTTTTATCATGTTGCTTTCTTCACCACAAGAAAAGTAGATGCCTTGGAAGAGCTTACATGGGATTATGGCATTGACTTTGACGACCATGATGATCCTGTTAAGGTGTTCAACTGCCAATGTGGCAGTAAATTCTGCAGGAGTATGACACGTTCAAATAGATCAAGATCGGCCTCACTTGCAAGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

850

Amino Acids

94.36

Weight (kDa)

5.45

Isoelectric Point (pI)

55.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	8 - 60	2.3e-20	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	525 - 670	4e-10	Pre-SET motif
SET	PF00856	690 - 812	7.5e-18	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20650 FvH4_2g20650 FvH4_2g20650
malus_domestica	MD00G1060700.v1.1
prunus_persica	Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1
pyrus_communis	pycom05g17400 pycom10g15310
rosa_chinensis	RchiOBHm_Chr6g0286831
rosa_laevigata	RLG00000012533
rosa_multiflora	Rmu_ssc0000279.1_g000009
rosa_roxburghii	Rroxscaffold_7G00181890
rosa_rugosa	Rorug06G0183800 Rorug06G0183900 Rorug06G0183900 Rorug06G0183900
rosa_samantha	Rh6AG295900 Rh6BG300200 Rh6CG308100 Rh6DG291900
rosa_wichuraiana	Rw6G025510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	2194, 2349
Acc36I	ACCTGC	2 cut(s)	452, 2032
AccB1I	GGYRCC	2 cut(s)	4, 2154
AccBSI	CCGCTC	1 cut(s)	2152
AccI	GTMKAC	1 cut(s)	2343
AciI	CCGC	4 cut(s)	689, 1859, 1895, 2152
AclWI	GGATC	7 cut(s)	710, 802, 1255, 1385, 1629, 2329, 2453
AcsI	RAATTY	3 cut(s)	1407, 1954, 2495
AcuI	CTGAAG	3 cut(s)	1014, 1416, 2040
AcyI	GRCGYC	3 cut(s)	5, 2191, 2346
AfaI	GTAC	2 cut(s)	834, 1450
AfiI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1501, 1937, 2184, 2241
AflIII	ACRYGT	1 cut(s)	2513
AgeI	ACCGGT	2 cut(s)	343, 565
AjnI	CCWGG	2 cut(s)	697, 1078
AjuI	GAANNNNNNNTTGG	6 cut(s)	777, 809, 1166, 1198, 1258, 1290
AluBI	AGCT	8 cut(s)	50, 149, 1045, 1067, 1203, 1571, 2255, 2419
AluI	AGCT	8 cut(s)	50, 149, 1045, 1067, 1203, 1571, 2255, 2419
Alw21I	GWGCWC	2 cut(s)	151, 1438
Alw26I	GTCTC	5 cut(s)	677, 1447, 1694, 2182, 2345
Alw44I	GTGCAC	1 cut(s)	1434
AlwI	GGATC	7 cut(s)	710, 802, 1255, 1385, 1629, 2329, 2453
AlwNI	CAGNNNCTG	1 cut(s)	1388
AoxI	GGCC	7 cut(s)	560, 780, 1355, 1807, 1939, 2092, 2535
ApaLI	GTGCAC	1 cut(s)	1434
ApeKI	GCWGC	3 cut(s)	47, 191, 1986
ApoI	RAATTY	3 cut(s)	1407, 1954, 2495
ArsI	GACNNNNNNTTYG	2 cut(s)	1644, 1676
AseI	ATTAAT	3 cut(s)	743, 1254, 2301
AsiGI	ACCGGT	2 cut(s)	343, 565
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	781, 1355, 2014
AsuHPI	GGTGA	7 cut(s)	85, 420, 540, 1017, 1745, 2141, 2380
AsuII	TTCGAA	2 cut(s)	26, 2080
AvaII	GGWCC	1 cut(s)	2014
BaeGI	GKGCMC	1 cut(s)	1438
BaeI	ACNNNNGTAYC	4 cut(s)	909, 942, 1440, 1473
BanI	GGYRCC	2 cut(s)	4, 2154
BanII	GRGCYC	3 cut(s)	151, 765, 980
BbsI	GAAGAC	3 cut(s)	1081, 1654, 2069
Bbv12I	GWGCWC	2 cut(s)	151, 1438
BbvI	GCAGC	3 cut(s)	59, 203, 1973
BccI	CCATC	8 cut(s)	319, 819, 947, 1238, 1639, 1878, 2064, 2084
BciT130I	CCWGG	2 cut(s)	699, 1080
BclI	TGATCA	1 cut(s)	220
BcoDI	GTCTC	5 cut(s)	677, 1447, 1694, 2182, 2345
BfaI	CTAG	4 cut(s)	1100, 1572, 1695, 2292
BfmI	CTRYAG	1 cut(s)	2500
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	452, 2032
BglI	GCCNNNNNGGC	1 cut(s)	2487
BglII	AGATCT	1 cut(s)	1286
BisI	GCNGC	4 cut(s)	48, 192, 1987, 2153
BlsI	GCNGC	4 cut(s)	49, 193, 1988, 2154
Bme1390I	CCNGG	2 cut(s)	699, 1080
Bme18I	GGWCC	1 cut(s)	2014
BmgT120I	GGNCC	3 cut(s)	781, 1355, 2014
BmiI	GGNNCC	4 cut(s)	6, 795, 2156, 2331
BmrFI	CCNGG	2 cut(s)	699, 1080
BmrI	ACTGGG	3 cut(s)	873, 1371, 1788
BmsI	GCATC	9 cut(s)	148, 169, 1093, 1291, 1660, 2203, 2257, 2308, 2395
BmuI	ACTGGG	3 cut(s)	873, 1371, 1788
BpiI	GAAGAC	3 cut(s)	1081, 1654, 2069
BplI	GAGNNNNNCTC	4 cut(s)	1004, 1036, 1826, 1858
BpmI	CTGGAG	1 cut(s)	906
Bpu10I	CCTNAGC	1 cut(s)	183
Bpu14I	TTCGAA	2 cut(s)	26, 2080
BpuEI	CTTGAG	1 cut(s)	118
BsaBI	GATNNNNATC	2 cut(s)	1674, 2530
BsaHI	GRCGYC	3 cut(s)	5, 2191, 2346
BsaJI	CCNNGG	4 cut(s)	698, 885, 1990, 2409
BsaWI	WCCGGW	3 cut(s)	343, 565, 2200
Bsc4I	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1501, 1937, 2184, 2241
Bse118I	RCCGGY	2 cut(s)	343, 565
Bse1I	ACTGG	6 cut(s)	80, 868, 923, 1377, 1382, 1783
Bse3DI	GCAATG	3 cut(s)	48, 1277, 2003
Bse8I	GATNNNNATC	2 cut(s)	1674, 2530
BseBI	CCWGG	2 cut(s)	699, 1080
BseDI	CCNNGG	4 cut(s)	698, 885, 1990, 2409
BseJI	GATNNNNATC	2 cut(s)	1674, 2530
BseLI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1501, 1937, 2184, 2241
BseMI	GCAATG	3 cut(s)	48, 1277, 2003
BseMII	CTCAG	5 cut(s)	543, 1043, 1464, 1487, 2231
BseNI	ACTGG	6 cut(s)	80, 868, 923, 1377, 1382, 1783
BseRI	GAGGAG	2 cut(s)	564, 1590
BseSI	GKGCMC	1 cut(s)	1438
BseXI	GCAGC	3 cut(s)	59, 203, 1973
BseYI	CCCAGC	1 cut(s)	1971
BsgI	GTGCAG	2 cut(s)	504, 1121
BshFI	GGCC	7 cut(s)	562, 782, 1357, 1809, 1941, 2094, 2537
BshNI	GGYRCC	2 cut(s)	4, 2154
BshTI	ACCGGT	2 cut(s)	343, 565
BsiHKAI	GWGCWC	2 cut(s)	151, 1438
BsiSI	CCGG	3 cut(s)	344, 566, 2201
BslFI	GGGAC	3 cut(s)	369, 1200, 1477
BslI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1501, 1937, 2184, 2241
BsmAI	GTCTC	5 cut(s)	677, 1447, 1694, 2182, 2345
BsmBI	CGTCTC	1 cut(s)	2182
BsmFI	GGGAC	3 cut(s)	369, 1200, 1477
BsmI	GAATGC	1 cut(s)	1973
BsnI	GGCC	7 cut(s)	562, 782, 1357, 1809, 1941, 2094, 2537
Bsp119I	TTCGAA	2 cut(s)	26, 2080
Bsp1286I	GDGCHC	4 cut(s)	151, 765, 980, 1438
Bsp1407I	TGTACA	1 cut(s)	832
Bsp19I	CCATGG	1 cut(s)	1990
BspACI	CCGC	4 cut(s)	689, 1859, 1895, 2152
BspANI	GGCC	7 cut(s)	562, 782, 1357, 1809, 1941, 2094, 2537
BspCNI	CTCAG	5 cut(s)	544, 1044, 1465, 1488, 2232
BspHI	TCATGA	2 cut(s)	412, 1552
BspLI	GGNNCC	4 cut(s)	6, 795, 2156, 2331
BspMAI	CTGCAG	1 cut(s)	2504
BspMI	ACCTGC	2 cut(s)	452, 2032
BspPI	GGATC	7 cut(s)	710, 802, 1255, 1385, 1629, 2329, 2453
BspQI	GCTCTTC	1 cut(s)	2409
BspT104I	TTCGAA	2 cut(s)	26, 2080
BspT107I	GGYRCC	2 cut(s)	4, 2154
BsrBI	CCGCTC	1 cut(s)	2152
BsrDI	GCAATG	3 cut(s)	48, 1277, 2003
BsrFI	RCCGGY	2 cut(s)	343, 565
BsrGI	TGTACA	1 cut(s)	832
BsrI	ACTGG	6 cut(s)	80, 868, 923, 1377, 1382, 1783
BssAI	RCCGGY	2 cut(s)	343, 565
BssECI	CCNNGG	4 cut(s)	698, 885, 1990, 2409
BssNI	GRCGYC	3 cut(s)	5, 2191, 2346
BssT1I	CCWWGG	2 cut(s)	1990, 2409
Bst2UI	CCWGG	2 cut(s)	699, 1080
Bst4CI	ACNGT	4 cut(s)	734, 839, 1453, 1883
Bst6I	CTCTTC	4 cut(s)	635, 1827, 1880, 2409
BstACI	GRCGYC	3 cut(s)	5, 2191, 2346
BstAPI	GCANNNNNTGC	1 cut(s)	179
BstAUI	TGTACA	1 cut(s)	832
BstBI	TTCGAA	2 cut(s)	26, 2080
BstC8I	GCNNGC	5 cut(s)	602, 960, 1334, 1895, 2096
BstDSI	CCRYGG	2 cut(s)	885, 1990
BstENI	CCTNNNNNAGG	1 cut(s)	391
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	5 cut(s)	677, 1447, 1694, 2182, 2345
BstMWI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 478, 1301, 2031, 2487, 2543
BstNI	CCWGG	2 cut(s)	699, 1080
BstNSI	RCATGY	2 cut(s)	1336, 1767
BstSCI	CCNGG	2 cut(s)	697, 1078
BstSFI	CTRYAG	1 cut(s)	2500
BstSLI	GKGCMC	1 cut(s)	1438
BstV1I	GCAGC	3 cut(s)	59, 203, 1973
BstV2I	GAAGAC	3 cut(s)	1081, 1654, 2069
BstX2I	RGATCY	1 cut(s)	1286
BstYI	RGATCY	1 cut(s)	1286
BsuRI	GGCC	7 cut(s)	562, 782, 1357, 1809, 1941, 2094, 2537
BtgI	CCRYGG	2 cut(s)	885, 1990
BtsI	GCAGTG	1 cut(s)	629
BtsIMutI	CAGTG	3 cut(s)	122, 629, 768
BveI	ACCTGC	2 cut(s)	452, 2032
Cac8I	GCNNGC	5 cut(s)	602, 960, 1334, 1895, 2096
CaiI	CAGNNNCTG	1 cut(s)	1388
CciI	TCATGA	2 cut(s)	412, 1552
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	2 cut(s)	343, 565
Cfr13I	GGNCC	3 cut(s)	781, 1355, 2014
CseI	GACGC	1 cut(s)	1737
Csp6I	GTAC	2 cut(s)	833, 1449
CspAI	ACCGGT	2 cut(s)	343, 565
CviQI	GTAC	2 cut(s)	833, 1449
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	87, 679
Eam1104I	CTCTTC	4 cut(s)	635, 1827, 1880, 2409
EarI	CTCTTC	4 cut(s)	635, 1827, 1880, 2409
Ecl136II	GAGCTC	1 cut(s)	149
Eco130I	CCWWGG	2 cut(s)	1990, 2409
Eco147I	AGGCCT	1 cut(s)	1809
Eco24I	GRGCYC	3 cut(s)	151, 765, 980
Eco47I	GGWCC	1 cut(s)	2014
Eco53kI	GAGCTC	1 cut(s)	149
Eco57I	CTGAAG	3 cut(s)	1014, 1416, 2040
EcoICRI	GAGCTC	1 cut(s)	149
EcoNI	CCTNNNNNAGG	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	1407
EcoRII	CCWGG	2 cut(s)	697, 1078
EcoT14I	CCWWGG	2 cut(s)	1990, 2409
EcoT38I	GRGCYC	3 cut(s)	151, 765, 980
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	1990, 2409
Esp3I	CGTCTC	1 cut(s)	2182
FalI	AAGNNNNNCTT	2 cut(s)	80, 112
FaqI	GGGAC	3 cut(s)	369, 1200, 1477
FauI	CCCGC	1 cut(s)	1902
FauNDI	CATATG	2 cut(s)	1089, 1191
FbaI	TGATCA	1 cut(s)	220
FblI	GTMKAC	1 cut(s)	2343
Fnu4HI	GCNGC	4 cut(s)	48, 192, 1987, 2153
FriOI	GRGCYC	3 cut(s)	151, 765, 980
Fsp4HI	GCNGC	4 cut(s)	48, 192, 1987, 2153
FspBI	CTAG	4 cut(s)	1100, 1572, 1695, 2292
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	4 cut(s)	48, 192, 1987, 2153
GsaI	CCCAGC	1 cut(s)	1975
GsuI	CTGGAG	1 cut(s)	906
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	7 cut(s)	562, 782, 1357, 1809, 1941, 2094, 2537
HapII	CCGG	3 cut(s)	344, 566, 2201
HgaI	GACGC	1 cut(s)	1737
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	3 cut(s)	5, 2191, 2346
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	3 cut(s)	276, 730, 2344
HindII	GTYRAC	3 cut(s)	276, 730, 2344
HindIII	AAGCTT	1 cut(s)	1043
HpaI	GTTAAC	1 cut(s)	730
HpaII	CCGG	3 cut(s)	344, 566, 2201
HphI	GGTGA	7 cut(s)	85, 420, 540, 1017, 1745, 2141, 2380
Hpy166II	GTNNAC	9 cut(s)	17, 65, 276, 349, 730, 835, 1436, 1628, 2344
Hpy188I	TCNGA	8 cut(s)	652, 826, 1053, 1474, 1522, 2059, 2241, 2334
Hpy8I	GTNNAC	9 cut(s)	17, 65, 276, 349, 730, 835, 1436, 1628, 2344
Hpy99I	CGWCG	3 cut(s)	2348, 2351, 2367
HpyAV	CCTTC	9 cut(s)	441, 775, 848, 993, 1038, 1423, 1645, 1799, 2054
HpyCH4III	ACNGT	4 cut(s)	734, 839, 1453, 1883
HpyCH4IV	ACGT	5 cut(s)	286, 455, 2191, 2346, 2515
HpyF10VI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 478, 1301, 2031, 2487, 2543
HpySE526I	ACGT	5 cut(s)	286, 455, 2191, 2346, 2515
Hsp92I	GRCGYC	3 cut(s)	5, 2191, 2346
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	220
KspAI	GTTAAC	1 cut(s)	730
LguI	GCTCTTC	1 cut(s)	2409
LmnI	GCTCC	1 cut(s)	1614
Lsp1109I	GCAGC	3 cut(s)	59, 203, 1973
LweI	GCATC	9 cut(s)	148, 169, 1093, 1291, 1660, 2203, 2257, 2308, 2395
MaeI	CTAG	4 cut(s)	1100, 1572, 1695, 2292
MaeII	ACGT	5 cut(s)	286, 455, 2191, 2346, 2515
MaeIII	GTNAC	5 cut(s)	120, 282, 396, 426, 1384
MbiI	CCGCTC	1 cut(s)	2152
MflI	RGATCY	1 cut(s)	1286
MhlI	GDGCHC	4 cut(s)	151, 765, 980, 1438
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	7 cut(s)	316, 563, 1499, 1507, 1596, 1843, 2347
MslI	CAYNNNNRTG	4 cut(s)	710, 816, 1194, 2113
MspA1I	CMGCKG	1 cut(s)	689
MspI	CCGG	3 cut(s)	344, 566, 2201
MspR9I	CCNGG	2 cut(s)	699, 1080
Mva1269I	GAATGC	1 cut(s)	1973
MvaI	CCWGG	2 cut(s)	699, 1080
MwoI	GCNNNNNNNGC	9 cut(s)	38, 47, 179, 188, 478, 1301, 2031, 2487, 2543
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1990
NdeI	CATATG	2 cut(s)	1089, 1191
NlaIV	GGNNCC	4 cut(s)	6, 795, 2156, 2331
NmuCI	GTSAC	2 cut(s)	120, 426
NspI	RCATGY	2 cut(s)	1336, 1767
NspV	TTCGAA	2 cut(s)	26, 2080
PaeI	GCATGC	1 cut(s)	1336
PagI	TCATGA	2 cut(s)	412, 1552
PceI	AGGCCT	1 cut(s)	1809
PciSI	GCTCTTC	1 cut(s)	2409
PctI	GAATGC	1 cut(s)	1973
PfeI	GAWTC	6 cut(s)	91, 242, 821, 998, 1235, 1274
PinAI	ACCGGT	2 cut(s)	343, 565
PkrI	GCNGC	4 cut(s)	49, 193, 1988, 2154
PleI	GAGTC	7 cut(s)	315, 562, 1498, 1506, 1595, 1843, 2347
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	7 cut(s)	315, 562, 1498, 1506, 1595, 1843, 2347
PshBI	ATTAAT	3 cut(s)	743, 1254, 2301
Psp124BI	GAGCTC	1 cut(s)	151
Psp6I	CCWGG	2 cut(s)	697, 1078
PspFI	CCCAGC	1 cut(s)	1971
PspGI	CCWGG	2 cut(s)	697, 1078
PspN4I	GGNNCC	4 cut(s)	6, 795, 2156, 2331
PspPI	GGNCC	3 cut(s)	781, 1355, 2014
PsrI	GAACNNNNNNTAC	2 cut(s)	2500, 2532
PstI	CTGCAG	1 cut(s)	2504
PstNI	CAGNNNCTG	1 cut(s)	1388
PsuI	RGATCY	1 cut(s)	1286
RsaI	GTAC	2 cut(s)	834, 1450
RsaNI	GTAC	2 cut(s)	833, 1449
RseI	CAYNNNNRTG	4 cut(s)	710, 816, 1194, 2113
SacI	GAGCTC	1 cut(s)	151
SalI	GTCGAC	1 cut(s)	2342
SapI	GCTCTTC	1 cut(s)	2409
SatI	GCNGC	4 cut(s)	48, 192, 1987, 2153
Sau96I	GGNCC	3 cut(s)	781, 1355, 2014
SchI	GAGTC	7 cut(s)	316, 563, 1499, 1507, 1596, 1843, 2347
ScrFI	CCNGG	2 cut(s)	699, 1080
SduI	GDGCHC	4 cut(s)	151, 765, 980, 1438
SfaNI	GCATC	9 cut(s)	148, 169, 1093, 1291, 1660, 2203, 2257, 2308, 2395
SfcI	CTRYAG	1 cut(s)	2500
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	2 cut(s)	26, 2080
SinI	GGWCC	1 cut(s)	2014
SmiMI	CAYNNNNRTG	4 cut(s)	710, 816, 1194, 2113
SmlI	CTYRAG	1 cut(s)	97
SmoI	CTYRAG	1 cut(s)	97
SphI	GCATGC	1 cut(s)	1336
SseBI	AGGCCT	1 cut(s)	1809
SsiI	CCGC	4 cut(s)	689, 1859, 1895, 2152
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	2136
SspMI	CTAG	4 cut(s)	1100, 1572, 1695, 2292
SstI	GAGCTC	1 cut(s)	151
StuI	AGGCCT	1 cut(s)	1809
StyD4I	CCNGG	2 cut(s)	697, 1078
StyI	CCWWGG	2 cut(s)	1990, 2409
TaaI	ACNGT	4 cut(s)	734, 839, 1453, 1883
TaiI	ACGT	5 cut(s)	289, 458, 2194, 2349, 2518
TaqI	TCGA	5 cut(s)	26, 2080, 2211, 2343, 2349
TatI	WGTACW	1 cut(s)	832
TauI	GCSGC	1 cut(s)	2155
TfiI	GAWTC	6 cut(s)	91, 242, 821, 998, 1235, 1274
TscAI	CASTG	3 cut(s)	129, 636, 775
TseFI	GTSAC	2 cut(s)	120, 426
TseI	GCWGC	3 cut(s)	47, 191, 1986
Tsp45I	GTSAC	2 cut(s)	120, 426
TspGWI	ACGGA	3 cut(s)	261, 361, 1136
TspRI	CASTG	3 cut(s)	129, 636, 775
VneI	GTGCAC	1 cut(s)	1434
VpaK11BI	GGWCC	1 cut(s)	2014
VspI	ATTAAT	3 cut(s)	743, 1254, 2301
XagI	CCTNNNNNAGG	1 cut(s)	391
XapI	RAATTY	3 cut(s)	1407, 1954, 2495
XbaI	TCTAGA	1 cut(s)	1099
XceI	RCATGY	2 cut(s)	1336, 1767
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1997
XmiI	GTMKAC	1 cut(s)	2343
XspI	CTAG	4 cut(s)	1100, 1572, 1695, 2292
ZraI	GACGTC	2 cut(s)	2192, 2347

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.