Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0006915

Physical Location & Seq

Genomic Coordinates Forward (+)

52959939 .. 52967155

Gene Structure 7217 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG300200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2445 bp

ATGGCGCCACCAAGTCCACAAGTTTCGAAAGCCTTTCGTGCAATGGCAGCTATTGGTATTAGTGAACAACAGGTGAAACCAGTTTTAAAGAATCTCTTGAGGTTGTATAACAGAGATTGGTCACTGATTGAAGCAGAGGAATATAGAGCTCTCGCTGATGCTATATTTGAGGCAGAAGATGCTAAGGTTGCAGCAGAAAAGAAGAAATGCAACAATTATGATCAGGAAGATATGGACGCAGAATCACATCCACACCATGAACCTGAACTTCCGTTGACGAGGTTACGTTCAAGAAGTCAAGATGAGAGTCCATCACAGAAGAAGAAATCTTTAGATGATGAACCGGTGGACAATATAGAGGAAGATTTCTCCGTTCCTCATCGTCCCTTGAAAAGGTTACGCCTACAAAATCATGAGTGTCAGGTGTCACCTTCCTCAAATACCTGCAATCCCATGTCTGGTGGTAGTTTGCTCATAAAGCCAAAAGTGGAAGCAGAGGAACTACTTGACACTCGTTCTGCACAACAGCCCCAAAATACTTCACATTCACCTGAGTCAAGGCCACCGGTTTCTCCTCATTCTGGTATTAAAGATAAGGGCAAGCAACCTCTTATATCTAAACCTTTGGCACTGCAAGGGAAGAGTTTATCGGAAAGATCATCTAATGGTGTTCGCTTTAAAGAGACAGCGGTTGAACCAGGGATCATTCTTGTGCCTAAACAGAATGTTAACAGTTTAGCATTAATCACGCCTAAAGATGAGCCCTTCACTGATGACATGGCCCAAGACGAGGTTCCTATTGCCATGATCCATCCTGATAATGTGCACCGTCCTCTATTGACAGAAGGTGCGACTGGAAAGCAACATGATGAACCCGTGGCTTCCCAAGAGAGAGAAAGTAGAAATGATACTCCAGTTTTATCTAATGAGGGGAGTATGAATGATGAGCTTGCAACTATTCCAGAGGGCTCTCCTTCTAACTTGGGGGAATCTTCTTGCTTAGAGGTTGCCTCATCACCTTCAGGAGAGGTAAAGCTTTCTCTGAGTTGCAGTTCAGCTATTGGAAGACCAGGCTTTCTTATGCCTAATCTAGATGCAATTCTAAAATTGACGGAGGAAAAATGTCTGCACACATACAAAATCATTGACCCTAAGTTCTCTTTGAAAAATCTGTTGGGACATATGTGTGAGAGCTTCTTGGAATTGGCAACTAATTCTAATGATGAATCACAGGATGGATCAATTAATGTAGCACCAAATCTTGATTCATTGCAAAGATCTCCTGCTTGGGATGCTGTGGGTGGAAATAAGGAAACACTTTCCATGCAGTCATGTGCTTTGAACGGGCCTGTTATTATGGATTGCCCCAGTCCAGTTACTGATCCTGAAGTGCCAAGAATTCCCTTCACTTTGAATGGTAATTGTGCACAAGTCTCTGGTACTGTTGTTTCTAATGGTTTTTCTGAGGATAATGTGGATGAGTCCCTGAGTCTGGTGGTTGTTCAAAACTCTGATCTAACTCCTGATGATCTAAGGACTATTCATGATATAAATGATATAGCTAGAGGAGAAGAAAGAGTCAAAATATCGTGGGTAAATGAAAGGAGCAGGGATCGTCCACCATCCTTCTTCTATATCTCCAAAAACCTTGTCTTCAAAGATGCTGATCTTAAAATATGTCTCTCTAGCATTGAGGAAAAGAATTGCTGTGCAACTTGCTTTGGTGACTGTGTATCAGCGTCTATACCTTGTGCATGTGCATATCAAACTGGGGGTAAGTTTGCTTACACACCAGAAGGCCTCATTAAAGACGATCTATTGGAAGAGTGTATCTCTATGACTCGTAATCCGCAACCACACCATCTCTTCTACTGTAAGAACTGCCCGCTTGAAAGAATAAAGAATGACGATTGTTTAGAGCCATGCAAAGGCCATTTAAGGAGGAATTTCATTAAAGAATGCTGGGTTAAATGTGGCTGCCATGGGCAATGTGGCAACAGGGTGGTCCAGAGAGGCTTGAATTGCAACTTGCAGGTCTTTTTTACTTCAGAAGGAAAAGGATGGGGTCTTCGAACCTTAGATGGCCTGCCTAAAGGTGCATTTGTGTGTGAGTTTGTTGGTGAAATATTAACCAACAAAGAGCGGCACCGAAGGAAAATCCAAAGCACCAGAAGTGGGAGACGTCCTTATCCGGTATTACTCGATGCAGATTGGGGTAGTAAAGCCAATCTGAGGGATGAAGAAGCTCTCTGTTTGGATGCGACAAAATATGGAAATGTTGCTAGGTTTATTAATCACAGATGTTTGGATGCAAACTTGGTTCCGATCCCTGTCGAAGTCGAGACTCCTGATCGTCGCTTTTATCATGTTGCTTTCTTCACCACAAGAAAAGTAGATGCCTTGGAAGAGCTTACATGGGTGAGTAGTTTTTATGCTATTGGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006304 GO:0006305 GO:0006306 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009892 GO:0009987 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016458 GO:0019222 GO:0031047 GO:0032259 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043412 GO:0043414 GO:0044237 GO:0044238 GO:0044260 GO:0044424 GO:0044464 GO:0044728 GO:0046483 GO:0048519 GO:0050789 GO:0060255 GO:0065007 GO:0071704 GO:0080188 GO:0090304 GO:1901360

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pre-SET SET WIYLD

Protein Analysis

814

Amino Acids

90.24

Weight (kDa)

5.42

Isoelectric Point (pI)

56.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WIYLD	PF10440	8 - 60	2.2e-20	Ubiquitin-binding WIYLD domain
Pre-SET	PF05033	522 - 667	4.1e-10	Pre-SET motif
SET	PF00856	687 - 806	2.1e-15	SET domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006915)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_2g20650 FvH4_2g20650 FvH4_2g20650
malus_domestica	MD00G1060700.v1.1
prunus_persica	Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1 Prupe.8G216300_v2.0.a1
pyrus_communis	pycom05g17400 pycom10g15310
rosa_chinensis	RchiOBHm_Chr6g0286831
rosa_laevigata	RLG00000012533
rosa_multiflora	Rmu_ssc0000279.1_g000009
rosa_roxburghii	Rroxscaffold_7G00181890
rosa_rugosa	Rorug06G0183800 Rorug06G0183900 Rorug06G0183900 Rorug06G0183900
rosa_samantha	Rh6AG295900 Rh6BG300200 Rh6CG308100 Rh6DG291900
rosa_wichuraiana	Rw6G025510

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	2185
Acc36I	ACCTGC	2 cut(s)	452, 2023
AccB1I	GGYRCC	2 cut(s)	4, 2145
AccBSI	CCGCTC	1 cut(s)	2143
AciI	CCGC	4 cut(s)	689, 1850, 1886, 2143
AclWI	GGATC	6 cut(s)	710, 802, 1246, 1376, 1620, 2320
AcsI	RAATTY	2 cut(s)	1398, 1945
AcuI	CTGAAG	3 cut(s)	1005, 1407, 2031
AcyI	GRCGYC	2 cut(s)	5, 2182
AfaI	GTAC	1 cut(s)	1441
AfiI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1492, 1928, 2175, 2232
AgeI	ACCGGT	2 cut(s)	343, 565
AjnI	CCWGG	2 cut(s)	697, 1069
AjuI	GAANNNNNNNTTGG	6 cut(s)	777, 809, 1157, 1189, 1249, 1281
AluBI	AGCT	9 cut(s)	50, 149, 949, 1036, 1058, 1194, 1562, 2246, 2410
AluI	AGCT	9 cut(s)	50, 149, 949, 1036, 1058, 1194, 1562, 2246, 2410
Alw21I	GWGCWC	3 cut(s)	151, 828, 1429
Alw26I	GTCTC	5 cut(s)	677, 1438, 1685, 2173, 2336
Alw44I	GTGCAC	2 cut(s)	824, 1425
AlwI	GGATC	6 cut(s)	710, 802, 1246, 1376, 1620, 2320
AlwNI	CAGNNNCTG	1 cut(s)	1379
AoxI	GGCC	6 cut(s)	560, 780, 1346, 1798, 1930, 2083
ApaLI	GTGCAC	2 cut(s)	824, 1425
ApeKI	GCWGC	3 cut(s)	47, 191, 1977
ApoI	RAATTY	2 cut(s)	1398, 1945
ArsI	GACNNNNNNTTYG	2 cut(s)	1635, 1667
AseI	ATTAAT	3 cut(s)	743, 1245, 2292
AsiGI	ACCGGT	2 cut(s)	343, 565
AspLEI	GCGC	1 cut(s)	7
AspS9I	GGNCC	3 cut(s)	781, 1346, 2005
AsuHPI	GGTGA	8 cut(s)	85, 420, 540, 1008, 1736, 2132, 2371, 2431
AsuII	TTCGAA	2 cut(s)	26, 2071
AvaII	GGWCC	1 cut(s)	2005
BaeGI	GKGCMC	2 cut(s)	828, 1429
BaeI	ACNNNNGTAYC	4 cut(s)	900, 933, 1431, 1464
BanI	GGYRCC	2 cut(s)	4, 2145
BanII	GRGCYC	3 cut(s)	151, 765, 971
BbsI	GAAGAC	3 cut(s)	1072, 1645, 2060
Bbv12I	GWGCWC	3 cut(s)	151, 828, 1429
BbvI	GCAGC	3 cut(s)	59, 203, 1964
BccI	CCATC	7 cut(s)	319, 819, 1229, 1630, 1869, 2055, 2075
BciT130I	CCWGG	2 cut(s)	699, 1071
BclI	TGATCA	1 cut(s)	220
BcoDI	GTCTC	5 cut(s)	677, 1438, 1685, 2173, 2336
BfaI	CTAG	4 cut(s)	1091, 1563, 1686, 2283
BfoI	RGCGCY	1 cut(s)	8
BfuAI	ACCTGC	2 cut(s)	452, 2023
BglII	AGATCT	1 cut(s)	1277
BisI	GCNGC	4 cut(s)	48, 192, 1978, 2144
BlsI	GCNGC	4 cut(s)	49, 193, 1979, 2145
Bme1390I	CCNGG	2 cut(s)	699, 1071
Bme18I	GGWCC	1 cut(s)	2005
BmgT120I	GGNCC	3 cut(s)	781, 1346, 2005
BmiI	GGNNCC	4 cut(s)	6, 795, 2147, 2322
BmrFI	CCNGG	2 cut(s)	699, 1071
BmrI	ACTGGG	2 cut(s)	1362, 1779
BmsI	GCATC	9 cut(s)	148, 169, 1084, 1282, 1651, 2194, 2248, 2299, 2386
BmuI	ACTGGG	2 cut(s)	1362, 1779
BpiI	GAAGAC	3 cut(s)	1072, 1645, 2060
BplI	GAGNNNNNCTC	4 cut(s)	995, 1027, 1817, 1849
BpmI	CTGGAG	1 cut(s)	897
Bpu10I	CCTNAGC	1 cut(s)	183
Bpu14I	TTCGAA	2 cut(s)	26, 2071
BpuEI	CTTGAG	1 cut(s)	118
BsaBI	GATNNNNATC	1 cut(s)	1665
BsaHI	GRCGYC	2 cut(s)	5, 2182
BsaJI	CCNNGG	4 cut(s)	698, 876, 1981, 2400
BsaWI	WCCGGW	3 cut(s)	343, 565, 2191
Bsc4I	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1492, 1928, 2175, 2232
Bse118I	RCCGGY	2 cut(s)	343, 565
Bse1I	ACTGG	6 cut(s)	80, 859, 914, 1368, 1373, 1774
Bse3DI	GCAATG	3 cut(s)	48, 1268, 1994
Bse8I	GATNNNNATC	1 cut(s)	1665
BseBI	CCWGG	2 cut(s)	699, 1071
BseDI	CCNNGG	4 cut(s)	698, 876, 1981, 2400
BseJI	GATNNNNATC	1 cut(s)	1665
BseLI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1492, 1928, 2175, 2232
BseMI	GCAATG	3 cut(s)	48, 1268, 1994
BseMII	CTCAG	5 cut(s)	543, 1034, 1455, 1478, 2222
BseNI	ACTGG	6 cut(s)	80, 859, 914, 1368, 1373, 1774
BseRI	GAGGAG	2 cut(s)	564, 1581
BseSI	GKGCMC	2 cut(s)	828, 1429
BseXI	GCAGC	3 cut(s)	59, 203, 1964
BseYI	CCCAGC	1 cut(s)	1962
BsgI	GTGCAG	2 cut(s)	504, 1112
BshFI	GGCC	6 cut(s)	562, 782, 1348, 1800, 1932, 2085
BshNI	GGYRCC	2 cut(s)	4, 2145
BshTI	ACCGGT	2 cut(s)	343, 565
BsiHKAI	GWGCWC	3 cut(s)	151, 828, 1429
BsiSI	CCGG	3 cut(s)	344, 566, 2192
BslFI	GGGAC	3 cut(s)	369, 1191, 1468
BslI	CCNNNNNNNGG	8 cut(s)	393, 458, 581, 790, 1492, 1928, 2175, 2232
BsmAI	GTCTC	5 cut(s)	677, 1438, 1685, 2173, 2336
BsmBI	CGTCTC	1 cut(s)	2173
BsmFI	GGGAC	3 cut(s)	369, 1191, 1468
BsmI	GAATGC	1 cut(s)	1964
BsnI	GGCC	6 cut(s)	562, 782, 1348, 1800, 1932, 2085
Bsp119I	TTCGAA	2 cut(s)	26, 2071
Bsp1286I	GDGCHC	5 cut(s)	151, 765, 828, 971, 1429
Bsp19I	CCATGG	1 cut(s)	1981
BspACI	CCGC	4 cut(s)	689, 1850, 1886, 2143
BspANI	GGCC	6 cut(s)	562, 782, 1348, 1800, 1932, 2085
BspCNI	CTCAG	5 cut(s)	544, 1035, 1456, 1479, 2223
BspHI	TCATGA	2 cut(s)	412, 1543
BspLI	GGNNCC	4 cut(s)	6, 795, 2147, 2322
BspMI	ACCTGC	2 cut(s)	452, 2023
BspPI	GGATC	6 cut(s)	710, 802, 1246, 1376, 1620, 2320
BspQI	GCTCTTC	1 cut(s)	2400
BspT104I	TTCGAA	2 cut(s)	26, 2071
BspT107I	GGYRCC	2 cut(s)	4, 2145
BsrBI	CCGCTC	1 cut(s)	2143
BsrDI	GCAATG	3 cut(s)	48, 1268, 1994
BsrFI	RCCGGY	2 cut(s)	343, 565
BsrI	ACTGG	6 cut(s)	80, 859, 914, 1368, 1373, 1774
BssAI	RCCGGY	2 cut(s)	343, 565
BssECI	CCNNGG	4 cut(s)	698, 876, 1981, 2400
BssNI	GRCGYC	2 cut(s)	5, 2182
BssT1I	CCWWGG	2 cut(s)	1981, 2400
Bst2UI	CCWGG	2 cut(s)	699, 1071
Bst4CI	ACNGT	5 cut(s)	734, 830, 1444, 1730, 1874
Bst6I	CTCTTC	4 cut(s)	635, 1818, 1871, 2400
BstACI	GRCGYC	2 cut(s)	5, 2182
BstAPI	GCANNNNNTGC	1 cut(s)	179
BstBI	TTCGAA	2 cut(s)	26, 2071
BstC8I	GCNNGC	4 cut(s)	602, 951, 1886, 2087
BstDSI	CCRYGG	2 cut(s)	876, 1981
BstENI	CCTNNNNNAGG	1 cut(s)	391
BstH2I	RGCGCY	1 cut(s)	8
BstHHI	GCGC	1 cut(s)	7
BstMAI	GTCTC	5 cut(s)	677, 1438, 1685, 2173, 2336
BstMWI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1292, 2022
BstNI	CCWGG	2 cut(s)	699, 1071
BstNSI	RCATGY	1 cut(s)	1758
BstSCI	CCNGG	2 cut(s)	697, 1069
BstSLI	GKGCMC	2 cut(s)	828, 1429
BstV1I	GCAGC	3 cut(s)	59, 203, 1964
BstV2I	GAAGAC	3 cut(s)	1072, 1645, 2060
BstX2I	RGATCY	1 cut(s)	1277
BstYI	RGATCY	1 cut(s)	1277
BsuRI	GGCC	6 cut(s)	562, 782, 1348, 1800, 1932, 2085
BtgI	CCRYGG	2 cut(s)	876, 1981
BtsI	GCAGTG	1 cut(s)	629
BtsIMutI	CAGTG	3 cut(s)	122, 629, 768
BveI	ACCTGC	2 cut(s)	452, 2023
Cac8I	GCNNGC	4 cut(s)	602, 951, 1886, 2087
CaiI	CAGNNNCTG	1 cut(s)	1379
CciI	TCATGA	2 cut(s)	412, 1543
CfoI	GCGC	1 cut(s)	7
Cfr10I	RCCGGY	2 cut(s)	343, 565
Cfr13I	GGNCC	3 cut(s)	781, 1346, 2005
CseI	GACGC	2 cut(s)	245, 1728
Csp6I	GTAC	1 cut(s)	1440
CspAI	ACCGGT	2 cut(s)	343, 565
CviQI	GTAC	1 cut(s)	1440
DinI	GGCGCC	1 cut(s)	6
DraI	TTTAAA	2 cut(s)	87, 679
Eam1104I	CTCTTC	4 cut(s)	635, 1818, 1871, 2400
EarI	CTCTTC	4 cut(s)	635, 1818, 1871, 2400
Ecl136II	GAGCTC	1 cut(s)	149
Eco130I	CCWWGG	2 cut(s)	1981, 2400
Eco147I	AGGCCT	1 cut(s)	1800
Eco24I	GRGCYC	3 cut(s)	151, 765, 971
Eco47I	GGWCC	1 cut(s)	2005
Eco53kI	GAGCTC	1 cut(s)	149
Eco57I	CTGAAG	3 cut(s)	1005, 1407, 2031
EcoICRI	GAGCTC	1 cut(s)	149
EcoNI	CCTNNNNNAGG	1 cut(s)	391
EcoRI	GAATTC	1 cut(s)	1398
EcoRII	CCWGG	2 cut(s)	697, 1069
EcoT14I	CCWWGG	2 cut(s)	1981, 2400
EcoT38I	GRGCYC	3 cut(s)	151, 765, 971
EgeI	GGCGCC	1 cut(s)	6
EheI	GGCGCC	1 cut(s)	6
ErhI	CCWWGG	2 cut(s)	1981, 2400
Esp3I	CGTCTC	1 cut(s)	2173
FalI	AAGNNNNNCTT	2 cut(s)	80, 112
FaqI	GGGAC	3 cut(s)	369, 1191, 1468
FauI	CCCGC	1 cut(s)	1893
FauNDI	CATATG	1 cut(s)	1182
FbaI	TGATCA	1 cut(s)	220
Fnu4HI	GCNGC	4 cut(s)	48, 192, 1978, 2144
FriOI	GRGCYC	3 cut(s)	151, 765, 971
Fsp4HI	GCNGC	4 cut(s)	48, 192, 1978, 2144
FspBI	CTAG	4 cut(s)	1091, 1563, 1686, 2283
GlaI	GCGC	1 cut(s)	6
GluI	GCNGC	4 cut(s)	48, 192, 1978, 2144
GsaI	CCCAGC	1 cut(s)	1966
GsuI	CTGGAG	1 cut(s)	897
HaeII	RGCGCY	1 cut(s)	8
HaeIII	GGCC	6 cut(s)	562, 782, 1348, 1800, 1932, 2085
HapII	CCGG	3 cut(s)	344, 566, 2192
HgaI	GACGC	2 cut(s)	245, 1728
HhaI	GCGC	1 cut(s)	7
Hin1I	GRCGYC	2 cut(s)	5, 2182
Hin6I	GCGC	1 cut(s)	5
HinP1I	GCGC	1 cut(s)	5
HincII	GTYRAC	2 cut(s)	276, 730
HindII	GTYRAC	2 cut(s)	276, 730
HindIII	AAGCTT	1 cut(s)	1034
HpaI	GTTAAC	1 cut(s)	730
HpaII	CCGG	3 cut(s)	344, 566, 2192
HphI	GGTGA	8 cut(s)	85, 420, 540, 1008, 1736, 2132, 2371, 2431
Hpy166II	GTNNAC	8 cut(s)	17, 65, 276, 349, 730, 826, 1427, 1619
Hpy188I	TCNGA	7 cut(s)	652, 1044, 1465, 1513, 2050, 2232, 2325
Hpy8I	GTNNAC	8 cut(s)	17, 65, 276, 349, 730, 826, 1427, 1619
Hpy99I	CGWCG	1 cut(s)	2358
HpyCH4III	ACNGT	5 cut(s)	734, 830, 1444, 1730, 1874
HpyCH4IV	ACGT	2 cut(s)	286, 2182
HpyF10VI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1292, 2022
HpySE526I	ACGT	2 cut(s)	286, 2182
Hsp92I	GRCGYC	2 cut(s)	5, 2182
HspAI	GCGC	1 cut(s)	5
KasI	GGCGCC	1 cut(s)	4
Ksp22I	TGATCA	1 cut(s)	220
KspAI	GTTAAC	1 cut(s)	730
LguI	GCTCTTC	1 cut(s)	2400
LmnI	GCTCC	1 cut(s)	1605
Lsp1109I	GCAGC	3 cut(s)	59, 203, 1964
LweI	GCATC	9 cut(s)	148, 169, 1084, 1282, 1651, 2194, 2248, 2299, 2386
MaeI	CTAG	4 cut(s)	1091, 1563, 1686, 2283
MaeII	ACGT	2 cut(s)	286, 2182
MaeIII	GTNAC	6 cut(s)	120, 282, 396, 426, 1375, 1724
MbiI	CCGCTC	1 cut(s)	2143
MflI	RGATCY	1 cut(s)	1277
MhlI	GDGCHC	5 cut(s)	151, 765, 828, 971, 1429
Mly113I	GGCGCC	1 cut(s)	5
MlyI	GAGTC	7 cut(s)	316, 563, 1490, 1498, 1587, 1834, 2338
MslI	CAYNNNNRTG	3 cut(s)	710, 1185, 2104
MspA1I	CMGCKG	1 cut(s)	689
MspI	CCGG	3 cut(s)	344, 566, 2192
MspR9I	CCNGG	2 cut(s)	699, 1071
Mva1269I	GAATGC	1 cut(s)	1964
MvaI	CCWGG	2 cut(s)	699, 1071
MwoI	GCNNNNNNNGC	7 cut(s)	38, 47, 179, 188, 478, 1292, 2022
NarI	GGCGCC	1 cut(s)	5
NcoI	CCATGG	1 cut(s)	1981
NdeI	CATATG	1 cut(s)	1182
NlaIV	GGNNCC	4 cut(s)	6, 795, 2147, 2322
NmuCI	GTSAC	3 cut(s)	120, 426, 1724
NspI	RCATGY	1 cut(s)	1758
NspV	TTCGAA	2 cut(s)	26, 2071
PagI	TCATGA	2 cut(s)	412, 1543
PceI	AGGCCT	1 cut(s)	1800
PciSI	GCTCTTC	1 cut(s)	2400
PctI	GAATGC	1 cut(s)	1964
PfeI	GAWTC	5 cut(s)	91, 242, 989, 1226, 1265
PinAI	ACCGGT	2 cut(s)	343, 565
PkrI	GCNGC	4 cut(s)	49, 193, 1979, 2145
PleI	GAGTC	7 cut(s)	315, 562, 1489, 1497, 1586, 1834, 2338
PluTI	GGCGCC	1 cut(s)	8
PpsI	GAGTC	7 cut(s)	315, 562, 1489, 1497, 1586, 1834, 2338
PshBI	ATTAAT	3 cut(s)	743, 1245, 2292
Psp124BI	GAGCTC	1 cut(s)	151
Psp6I	CCWGG	2 cut(s)	697, 1069
PspFI	CCCAGC	1 cut(s)	1962
PspGI	CCWGG	2 cut(s)	697, 1069
PspN4I	GGNNCC	4 cut(s)	6, 795, 2147, 2322
PspPI	GGNCC	3 cut(s)	781, 1346, 2005
PstNI	CAGNNNCTG	1 cut(s)	1379
PsuI	RGATCY	1 cut(s)	1277
RsaI	GTAC	1 cut(s)	1441
RsaNI	GTAC	1 cut(s)	1440
RseI	CAYNNNNRTG	3 cut(s)	710, 1185, 2104
SacI	GAGCTC	1 cut(s)	151
SapI	GCTCTTC	1 cut(s)	2400
SatI	GCNGC	4 cut(s)	48, 192, 1978, 2144
Sau96I	GGNCC	3 cut(s)	781, 1346, 2005
SchI	GAGTC	7 cut(s)	316, 563, 1490, 1498, 1587, 1834, 2338
ScrFI	CCNGG	2 cut(s)	699, 1071
SduI	GDGCHC	5 cut(s)	151, 765, 828, 971, 1429
SfaNI	GCATC	9 cut(s)	148, 169, 1084, 1282, 1651, 2194, 2248, 2299, 2386
SfoI	GGCGCC	1 cut(s)	6
SfuI	TTCGAA	2 cut(s)	26, 2071
SinI	GGWCC	1 cut(s)	2005
SmiMI	CAYNNNNRTG	3 cut(s)	710, 1185, 2104
SmlI	CTYRAG	1 cut(s)	97
SmoI	CTYRAG	1 cut(s)	97
SseBI	AGGCCT	1 cut(s)	1800
SsiI	CCGC	4 cut(s)	689, 1850, 1886, 2143
SspDI	GGCGCC	1 cut(s)	4
SspI	AATATT	1 cut(s)	2127
SspMI	CTAG	4 cut(s)	1091, 1563, 1686, 2283
SstI	GAGCTC	1 cut(s)	151
StuI	AGGCCT	1 cut(s)	1800
StyD4I	CCNGG	2 cut(s)	697, 1069
StyI	CCWWGG	2 cut(s)	1981, 2400
TaaI	ACNGT	5 cut(s)	734, 830, 1444, 1730, 1874
TaiI	ACGT	2 cut(s)	289, 2185
TaqI	TCGA	5 cut(s)	26, 2071, 2202, 2334, 2340
TauI	GCSGC	1 cut(s)	2146
TfiI	GAWTC	5 cut(s)	91, 242, 989, 1226, 1265
TscAI	CASTG	3 cut(s)	129, 636, 775
TseFI	GTSAC	3 cut(s)	120, 426, 1724
TseI	GCWGC	3 cut(s)	47, 191, 1977
Tsp45I	GTSAC	3 cut(s)	120, 426, 1724
TspGWI	ACGGA	3 cut(s)	261, 361, 1127
TspRI	CASTG	3 cut(s)	129, 636, 775
VneI	GTGCAC	2 cut(s)	824, 1425
VpaK11BI	GGWCC	1 cut(s)	2005
VspI	ATTAAT	3 cut(s)	743, 1245, 2292
XagI	CCTNNNNNAGG	1 cut(s)	391
XapI	RAATTY	2 cut(s)	1398, 1945
XbaI	TCTAGA	1 cut(s)	1090
XceI	RCATGY	1 cut(s)	1758
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1988
XspI	CTAG	4 cut(s)	1091, 1563, 1686, 2283
ZraI	GACGTC	1 cut(s)	2183

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.