Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0009776

Physical Location & Seq

Genomic Coordinates Reverse (-)

21872599 .. 21877723

Gene Structure 5125 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g18630.8

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1812 bp

ATGAAGTACGTATTGGTGACGGGTGGTGTTGTTAGTGGACTCGGAAAAGGGGTCACAGCCAGTAGTATCGGATTGATCCTCCAAGCCTGCGGCCTTCGTGTTACATCCATCAAAATTGATCCTTACTTAAACACGGATGCAGGGACAATGTCTCCTTTTGAGCATGGGGAGGTGTTTGTCTTAGATGATGGTGGTGAGGTGGACCTGGACCTCGGAAACTATGAGCGGTTTCTAGATCTGACTTTGACCCGCGATAACAACATCACGACTGGAAAAATTTATCAGTCTGTTATTGACAGAGAACGAAAGGGAGATTATCTTGGAAAGACTGTCCAGGTTGTTCCACACATTACAGATGCCATCCAAGAGTGGATTGAGCGTGTGGCAATGGTACCTGTCGATGGAAAAGAAGGTCCAGCTGATGTTTGTGTCATTGAATTGGGCGGAACTATAGGGGATATCGAATCAATGCCTTTTATTGAGGCCCTTGGCCAGTTTTCATATCGTGTAGGACTTGAAAATTTCTGCTTGATTCATGTCAGTCTTGTGCCAGTTCTCAATGTTGTTGGTGAACAGAAAACAAAGCCTACACAGCACAGCGTTCGGGTACTCCGAGGACAGGGTTTGACACCTAATATTCTAGCTTGTAGGAGTACAAAGCCACTTGAGGATAACGTTAAAGCAAAACTCGCTCAATTTTGCCACGTGCCGGCTGAAAATATTGTCACTCTTTACGATGTTCCAAACATTTGGCAGATTCCTTTGCTTTTAAGAGATCAGAATGCGCACGAAGCAATCTTGAAAGGATTCAACCTTCTGGGTGTTGCTAGAGAGCCAAATTTGAGGGAATGGACAGCCAGGACAGAAATTTCTGCCAATTTACATGATCCTGTCAGAATTGCTATGGTTGGAAAATACACAGGTCTTTCAGATGCTTACCTCTCTGTTTTAAAGGCTCTTTTACATGCTTCTGTTGCTTGCCGCCGTAAACTTGTTGTAGATTGGGTTGCAGCAGGTGACCTTGAAGATGTTACTGCTGAAGAGGCCCCTGAGGCTTATAAGGCTGCGTGGGATCTATTGAAGGGTGCTGATGGTGTTCTAGTTCCAGGAGGGTTTGGAGATAGAGGAGTGCAAGGGAAAATTCTTGCGGCCAAGTATGCTCGCGAAAACAAAGTGCCATACCTTGGCATATGCCTGGGAATGCAAATTGCTGTCATTGAGTTTGCACGATCTGTCCTTGGTATCGCTGATGCTAACAGCACAGAATTTGATTCTGAAACTACAAGTCCTTGTGTCATATTTATGCCAGAGGGTTCAAAAACTCATATGGGAGGAACTATGCGTCTGGGTTCTAGGAGGACTTACTTCAAGGTTACTGACTGCAAATCTGCAAAACTGTATGGTAATGTGGCGTTTGTTGATGAACGACATCGACACAGATATGAGGTCAATCCTGATATGATATCACAACTTGAAAATGCTGGTTTATCGTTTGTTGGCAGAGATGAAACTGGTCGGCGCATGGAGATTGTTGAGCTGCCTGCCCATCCATACTTTGTTGGCGTTCAGTTTCATCCTGAATATAAGTCAAGGCCAGGGAAACCTTCTGCTCTGTTCTTAGGACTAATAGCAGCAGCATGCAGGCATCCAAATACAATCCCACAAATCAATGGCCATGTACCAAAGCCAGTTGCAAATGGGACGAGTAATGGACACATGACGGTTAAAGCCCACCAAAATGGACACGCTTTCAAGCCGTCCAATGGCTCCCTAAATGGTGTGTATAGCAACGGTAATGGCGTCCACTTTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

604

Amino Acids

65.67

Weight (kDa)

6.45

Isoelectric Point (pI)

32.91

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12670
fragaria_vesca	FvH4_3g13560 FvH4_3g13560
malus_domestica	MD10G1220500.v1.1
prunus_persica	Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1
pyrus_communis	pycom05g21760 pycom10g18630
rosa_chinensis	RchiOBHm_Chr5g0022521
rosa_laevigata	RLG00000032668
rosa_multiflora	Rmu_sc0011329.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056530
rosa_rugosa	Rorug05G0074500 Rorug05G0074600
rosa_samantha	Rh5AG161300 Rh5BG160200 Rh5CG174600 Rh5DG160900
rosa_wichuraiana	Rw0G005550 Rw5G014380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1059
AarI	CACCTGC	1 cut(s)	1004
Acc16I	TGCGCA	1 cut(s)	786
Acc36I	ACCTGC	1 cut(s)	1004
Acc65I	GGTACC	1 cut(s)	391
AccB1I	GGYRCC	1 cut(s)	391
AccB7I	CCANNNNNTGG	1 cut(s)	1184
AccBSI	CCGCTC	1 cut(s)	226
AccII	CGCG	2 cut(s)	252, 1164
AciI	CCGC	6 cut(s)	90, 226, 250, 444, 982, 1148
AclI	AACGTT	1 cut(s)	675
AclWI	GGATC	4 cut(s)	70, 113, 881, 1080
AcoI	YGGCCR	3 cut(s)	490, 1149, 1672
AcsI	RAATTY	6 cut(s)	276, 520, 838, 867, 1140, 1265
AcuI	CTGAAG	1 cut(s)	1059
AcvI	CACGTG	1 cut(s)	706
AcyI	GRCGYC	1 cut(s)	1800
AfaI	GTAC	5 cut(s)	8, 393, 609, 655, 1680
AfiI	CCNNNNNNNGG	5 cut(s)	401, 619, 709, 1184, 1763
AjnI	CCWGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	3 cut(s)	419, 644, 1537
AluI	AGCT	3 cut(s)	419, 644, 1537
Alw26I	GTCTC	1 cut(s)	156
AlwI	GGATC	4 cut(s)	70, 113, 881, 1080
AoxI	GGCC	7 cut(s)	91, 483, 490, 1044, 1149, 1592, 1672
ApeKI	GCWGC	5 cut(s)	1010, 1064, 1537, 1631, 1634
ApoI	RAATTY	6 cut(s)	276, 520, 838, 867, 1140, 1265
Asp700I	GAANNNNTTC	1 cut(s)	806
Asp718I	GGTACC	1 cut(s)	391
AspLEI	GCGC	2 cut(s)	787, 1521
AspS9I	GGNCC	5 cut(s)	202, 208, 413, 484, 1045
AsuHPI	GGTGA	4 cut(s)	28, 206, 581, 1028
AvaII	GGWCC	3 cut(s)	202, 208, 413
AxyI	CCTNAGG	1 cut(s)	1050
BalI	TGGCCA	2 cut(s)	492, 1674
BanI	GGYRCC	1 cut(s)	391
BbrPI	CACGTG	1 cut(s)	706
BbvI	GCAGC	5 cut(s)	1022, 1051, 1524, 1643, 1646
BccI	CCATC	6 cut(s)	116, 182, 368, 395, 1085, 1554
BceAI	ACGGC	2 cut(s)	969, 1741
BcgI	CGANNNNNNTGC	2 cut(s)	584, 618
BciT130I	CCWGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
BcoDI	GTCTC	1 cut(s)	156
BfaI	CTAG	5 cut(s)	233, 641, 828, 1100, 1353
BfmI	CTRYAG	1 cut(s)	450
BfuAI	ACCTGC	1 cut(s)	1004
BglI	GCCNNNNNGGC	1 cut(s)	1052
BglII	AGATCT	1 cut(s)	235
BisI	GCNGC	8 cut(s)	91, 982, 1011, 1065, 1149, 1538, 1632, 1635
BlsI	GCNGC	8 cut(s)	92, 983, 1012, 1066, 1150, 1539, 1633, 1636
Bme1390I	CCNGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
Bme18I	GGWCC	3 cut(s)	202, 208, 413
BmgT120I	GGNCC	5 cut(s)	202, 208, 413, 484, 1045
BmiI	GGNNCC	3 cut(s)	393, 1047, 1768
BmrFI	CCNGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
BmsI	GCATC	5 cut(s)	127, 346, 922, 1240, 1654
BpuEI	CTTGAG	1 cut(s)	686
BsaAI	YACGTR	2 cut(s)	10, 706
BsaHI	GRCGYC	1 cut(s)	1800
BsaJI	CCNNGG	7 cut(s)	211, 487, 613, 1183, 1195, 1237, 1595
BsaXI	ACNNNNNCTCC	2 cut(s)	136, 166
Bsc4I	CCNNNNNNNGG	5 cut(s)	401, 619, 709, 1184, 1763
Bse118I	RCCGGY	1 cut(s)	709
Bse1I	ACTGG	6 cut(s)	60, 274, 493, 551, 1516, 1688
Bse21I	CCTNAGG	1 cut(s)	1050
Bse3DI	GCAATG	1 cut(s)	393
BseBI	CCWGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
BseDI	CCNNGG	7 cut(s)	211, 487, 613, 1183, 1195, 1237, 1595
BseGI	GGATG	6 cut(s)	104, 142, 360, 1546, 1573, 1645
BseLI	CCNNNNNNNGG	5 cut(s)	401, 619, 709, 1184, 1763
BseMI	GCAATG	1 cut(s)	393
BseMII	CTCAG	1 cut(s)	1041
BseNI	ACTGG	6 cut(s)	60, 274, 493, 551, 1516, 1688
BseRI	GAGGAG	1 cut(s)	1140
BseXI	GCAGC	5 cut(s)	1022, 1051, 1524, 1643, 1646
Bsh1236I	CGCG	2 cut(s)	252, 1164
BshFI	GGCC	7 cut(s)	93, 485, 492, 1046, 1151, 1594, 1674
BshNI	GGYRCC	1 cut(s)	391
BsiSI	CCGG	1 cut(s)	710
BslFI	GGGAC	2 cut(s)	157, 1714
BslI	CCNNNNNNNGG	5 cut(s)	401, 619, 709, 1184, 1763
BsmAI	GTCTC	1 cut(s)	156
BsmFI	GGGAC	2 cut(s)	157, 1714
BsmI	GAATGC	2 cut(s)	787, 1206
BsnI	GGCC	7 cut(s)	93, 485, 492, 1046, 1151, 1594, 1674
Bsp143I	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
Bsp68I	TCGCGA	1 cut(s)	1164
BspACI	CCGC	6 cut(s)	90, 226, 250, 444, 982, 1148
BspANI	GGCC	7 cut(s)	93, 485, 492, 1046, 1151, 1594, 1674
BspCNI	CTCAG	1 cut(s)	1042
BspFNI	CGCG	2 cut(s)	252, 1164
BspLI	GGNNCC	3 cut(s)	393, 1047, 1768
BspMI	ACCTGC	1 cut(s)	1004
BspPI	GGATC	4 cut(s)	70, 113, 881, 1080
BspT107I	GGYRCC	1 cut(s)	391
BsrBI	CCGCTC	1 cut(s)	226
BsrDI	GCAATG	1 cut(s)	393
BsrFI	RCCGGY	1 cut(s)	709
BsrI	ACTGG	6 cut(s)	60, 274, 493, 551, 1516, 1688
BssAI	RCCGGY	1 cut(s)	709
BssECI	CCNNGG	7 cut(s)	211, 487, 613, 1183, 1195, 1237, 1595
BssMI	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
BssNI	GRCGYC	1 cut(s)	1800
BssT1I	CCWWGG	3 cut(s)	487, 1183, 1237
Bst2UI	CCWGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
Bst4CI	ACNGT	4 cut(s)	331, 1398, 1723, 1793
Bst6I	CTCTTC	1 cut(s)	1035
BstACI	GRCGYC	1 cut(s)	1800
BstBAI	YACGTR	2 cut(s)	10, 706
BstC8I	GCNNGC	7 cut(s)	88, 711, 979, 1162, 1542, 1639, 1643
BstDEI	CTNAG	3 cut(s)	181, 1050, 1618
BstEII	GGTNACC	1 cut(s)	1016
BstF5I	GGATG	6 cut(s)	104, 142, 360, 1546, 1573, 1645
BstFNI	CGCG	2 cut(s)	252, 1164
BstHHI	GCGC	2 cut(s)	787, 1521
BstKTI	GATC	7 cut(s)	78, 121, 238, 778, 889, 1075, 1232
BstMAI	GTCTC	1 cut(s)	156
BstMBI	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
BstMWI	GCNNNNNNNGC	8 cut(s)	592, 689, 791, 974, 1043, 1052, 1061, 1157
BstNI	CCWGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
BstNSI	RCATGY	2 cut(s)	968, 1641
BstPI	GGTNACC	1 cut(s)	1016
BstSCI	CCNGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
BstSFI	CTRYAG	1 cut(s)	450
BstSNI	TACGTA	1 cut(s)	10
BstUI	CGCG	2 cut(s)	252, 1164
BstV1I	GCAGC	5 cut(s)	1022, 1051, 1524, 1643, 1646
BstX2I	RGATCY	2 cut(s)	235, 1072
BstXI	CCANNNNNNTGG	2 cut(s)	750, 1739
BstYI	RGATCY	2 cut(s)	235, 1072
Bsu36I	CCTNAGG	1 cut(s)	1050
BsuRI	GGCC	7 cut(s)	93, 485, 492, 1046, 1151, 1594, 1674
BtsCI	GGATG	6 cut(s)	104, 142, 360, 1546, 1573, 1645
BtuMI	TCGCGA	1 cut(s)	1164
BveI	ACCTGC	1 cut(s)	1004
Cac8I	GCNNGC	7 cut(s)	88, 711, 979, 1162, 1542, 1639, 1643
CfoI	GCGC	2 cut(s)	787, 1521
Cfr10I	RCCGGY	1 cut(s)	709
Cfr13I	GGNCC	5 cut(s)	202, 208, 413, 484, 1045
CseI	GACGC	2 cut(s)	1331, 1789
Csp6I	GTAC	5 cut(s)	7, 392, 608, 654, 1679
CviAII	CATG	8 cut(s)	164, 536, 884, 965, 1522, 1638, 1676, 1717
CviQI	GTAC	5 cut(s)	7, 392, 608, 654, 1679
DdeI	CTNAG	3 cut(s)	181, 1050, 1618
DpnI	GATC	7 cut(s)	77, 120, 237, 777, 888, 1074, 1231
DpnII	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
DraI	TTTAAA	1 cut(s)	951
EaeI	YGGCCR	3 cut(s)	490, 1149, 1672
Eam1104I	CTCTTC	1 cut(s)	1035
EarI	CTCTTC	1 cut(s)	1035
EciI	GGCGGA	1 cut(s)	459
Eco105I	TACGTA	1 cut(s)	10
Eco130I	CCWWGG	3 cut(s)	487, 1183, 1237
Eco32I	GATATC	2 cut(s)	460, 1464
Eco47I	GGWCC	3 cut(s)	202, 208, 413
Eco57I	CTGAAG	1 cut(s)	1059
Eco72I	CACGTG	1 cut(s)	706
Eco81I	CCTNAGG	1 cut(s)	1050
Eco91I	GGTNACC	1 cut(s)	1016
EcoO109I	RGGNCCY	2 cut(s)	484, 1045
EcoO65I	GGTNACC	1 cut(s)	1016
EcoRII	CCWGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
EcoRV	GATATC	2 cut(s)	460, 1464
EcoT14I	CCWWGG	3 cut(s)	487, 1183, 1237
ErhI	CCWWGG	3 cut(s)	487, 1183, 1237
FaeI	CATG	8 cut(s)	167, 539, 887, 968, 1525, 1641, 1679, 1720
FaqI	GGGAC	2 cut(s)	157, 1714
FatI	CATG	8 cut(s)	163, 535, 883, 964, 1521, 1637, 1675, 1716
FauI	CCCGC	1 cut(s)	257
FauNDI	CATATG	2 cut(s)	1190, 1326
Fnu4HI	GCNGC	8 cut(s)	91, 982, 1011, 1065, 1149, 1538, 1632, 1635
FokI	GGATG	6 cut(s)	91, 149, 347, 1533, 1560, 1632
Fsp4HI	GCNGC	8 cut(s)	91, 982, 1011, 1065, 1149, 1538, 1632, 1635
FspAI	RTGCGCAY	1 cut(s)	786
FspBI	CTAG	5 cut(s)	233, 641, 828, 1100, 1353
FspI	TGCGCA	1 cut(s)	786
GlaI	GCGC	2 cut(s)	786, 1520
GluI	GCNGC	8 cut(s)	91, 982, 1011, 1065, 1149, 1538, 1632, 1635
HaeIII	GGCC	7 cut(s)	93, 485, 492, 1046, 1151, 1594, 1674
HapII	CCGG	1 cut(s)	710
HgaI	GACGC	2 cut(s)	1331, 1789
HhaI	GCGC	2 cut(s)	787, 1521
Hin1I	GRCGYC	1 cut(s)	1800
Hin1II	CATG	8 cut(s)	167, 539, 887, 968, 1525, 1641, 1679, 1720
Hin6I	GCGC	2 cut(s)	785, 1519
HinP1I	GCGC	2 cut(s)	785, 1519
HinfI	GANTC	6 cut(s)	39, 464, 532, 757, 807, 1271
HpaII	CCGG	1 cut(s)	710
HphI	GGTGA	4 cut(s)	28, 206, 581, 1028
Hpy166II	GTNNAC	5 cut(s)	38, 202, 572, 989, 1804
Hpy188I	TCNGA	9 cut(s)	44, 71, 215, 240, 614, 780, 896, 931, 1276
Hpy188III	TCNNGA	6 cut(s)	233, 265, 799, 1163, 1454, 1577
Hpy8I	GTNNAC	5 cut(s)	38, 202, 572, 989, 1804
HpyAV	CCTTC	5 cut(s)	104, 404, 824, 1075, 1614
HpyCH4III	ACNGT	4 cut(s)	331, 1398, 1723, 1793
HpyCH4IV	ACGT	3 cut(s)	9, 675, 705
HpyCH4V	TGCA	9 cut(s)	140, 1010, 1132, 1204, 1226, 1383, 1391, 1641, 1694
HpyF10VI	GCNNNNNNNGC	8 cut(s)	592, 689, 791, 974, 1043, 1052, 1061, 1157
HpyF3I	CTNAG	3 cut(s)	181, 1050, 1618
HpySE526I	ACGT	3 cut(s)	9, 675, 705
Hsp92I	GRCGYC	1 cut(s)	1800
Hsp92II	CATG	8 cut(s)	167, 539, 887, 968, 1525, 1641, 1679, 1720
HspAI	GCGC	2 cut(s)	785, 1519
KpnI	GGTACC	1 cut(s)	395
KroI	GCCGGC	1 cut(s)	709
KroNI	GCCGGC	1 cut(s)	711
Kzo9I	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
LmnI	GCTCC	1 cut(s)	1772
Lsp1109I	GCAGC	5 cut(s)	1022, 1051, 1524, 1643, 1646
LweI	GCATC	5 cut(s)	127, 346, 922, 1240, 1654
MaeI	CTAG	5 cut(s)	233, 641, 828, 1100, 1353
MaeII	ACGT	3 cut(s)	9, 675, 705
MaeIII	GTNAC	7 cut(s)	16, 52, 100, 724, 1016, 1030, 1372
MalI	GATC	7 cut(s)	77, 120, 237, 777, 888, 1074, 1231
MbiI	CCGCTC	1 cut(s)	226
MboI	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
MboII	GAAGA	2 cut(s)	1037, 1052
MflI	RGATCY	2 cut(s)	235, 1072
MlsI	TGGCCA	2 cut(s)	492, 1674
MluNI	TGGCCA	2 cut(s)	492, 1674
MlyI	GAGTC	1 cut(s)	33
MmeI	TCCRAC	1 cut(s)	889
Mox20I	TGGCCA	2 cut(s)	492, 1674
MroNI	GCCGGC	1 cut(s)	709
MroXI	GAANNNNTTC	1 cut(s)	806
MscI	TGGCCA	2 cut(s)	492, 1674
MseI	TTAA	5 cut(s)	128, 678, 770, 950, 1725
MslI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1737
Msp20I	TGGCCA	2 cut(s)	492, 1674
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	1 cut(s)	710
MspR9I	CCNGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
Mva1269I	GAATGC	2 cut(s)	787, 1206
MvaI	CCWGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
MvnI	CGCG	2 cut(s)	252, 1164
MwoI	GCNNNNNNNGC	8 cut(s)	592, 689, 791, 974, 1043, 1052, 1061, 1157
NaeI	GCCGGC	1 cut(s)	711
NdeI	CATATG	2 cut(s)	1190, 1326
NdeII	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
NgoMIV	GCCGGC	1 cut(s)	709
NlaIII	CATG	8 cut(s)	167, 539, 887, 968, 1525, 1641, 1679, 1720
NlaIV	GGNNCC	3 cut(s)	393, 1047, 1768
NmuCI	GTSAC	4 cut(s)	16, 52, 724, 1016
NruI	TCGCGA	1 cut(s)	1164
NsbI	TGCGCA	1 cut(s)	786
NspI	RCATGY	2 cut(s)	968, 1641
PaeI	GCATGC	1 cut(s)	1641
PaqCI	CACCTGC	1 cut(s)	1004
PcsI	WCGNNNNNNNCGW	2 cut(s)	610, 1797
PctI	GAATGC	2 cut(s)	787, 1206
PdiI	GCCGGC	1 cut(s)	711
PdmI	GAANNNNTTC	1 cut(s)	806
PfeI	GAWTC	5 cut(s)	464, 532, 757, 807, 1271
PflFI	GACNNNGTC	1 cut(s)	148
PflMI	CCANNNNNTGG	1 cut(s)	1184
PfoI	TCCNGGA	1 cut(s)	1105
PkrI	GCNGC	8 cut(s)	92, 983, 1012, 1066, 1150, 1539, 1633, 1636
PleI	GAGTC	1 cut(s)	33
PmaCI	CACGTG	1 cut(s)	706
PmlI	CACGTG	1 cut(s)	706
PpsI	GAGTC	1 cut(s)	33
Ppu21I	YACGTR	2 cut(s)	10, 706
PsiI	TTATAA	1 cut(s)	1059
Psp1406I	AACGTT	1 cut(s)	675
Psp6I	CCWGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
PspCI	CACGTG	1 cut(s)	706
PspEI	GGTNACC	1 cut(s)	1016
PspGI	CCWGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
PspN4I	GGNNCC	3 cut(s)	393, 1047, 1768
PspPI	GGNCC	5 cut(s)	202, 208, 413, 484, 1045
PsuI	RGATCY	2 cut(s)	235, 1072
PsyI	GACNNNGTC	1 cut(s)	148
PvuII	CAGCTG	1 cut(s)	419
RruI	TCGCGA	1 cut(s)	1164
RsaI	GTAC	5 cut(s)	8, 393, 609, 655, 1680
RsaNI	GTAC	5 cut(s)	7, 392, 608, 654, 1679
RseI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1737
SaqAI	TTAA	5 cut(s)	128, 678, 770, 950, 1725
SatI	GCNGC	8 cut(s)	91, 982, 1011, 1065, 1149, 1538, 1632, 1635
Sau3AI	GATC	7 cut(s)	75, 118, 235, 775, 886, 1072, 1229
Sau96I	GGNCC	5 cut(s)	202, 208, 413, 484, 1045
SchI	GAGTC	1 cut(s)	33
ScrFI	CCNGG	6 cut(s)	206, 335, 859, 1107, 1196, 1596
SfaNI	GCATC	5 cut(s)	127, 346, 922, 1240, 1654
SfcI	CTRYAG	1 cut(s)	450
SinI	GGWCC	3 cut(s)	202, 208, 413
SmiMI	CAYNNNNRTG	3 cut(s)	1301, 1440, 1737
SmlI	CTYRAG	1 cut(s)	665
SmoI	CTYRAG	1 cut(s)	665
SnaBI	TACGTA	1 cut(s)	10
SphI	GCATGC	1 cut(s)	1641
SsiI	CCGC	6 cut(s)	90, 226, 250, 444, 982, 1148
SspI	AATATT	2 cut(s)	637, 721
SspMI	CTAG	5 cut(s)	233, 641, 828, 1100, 1353
StyD4I	CCNGG	6 cut(s)	204, 333, 857, 1105, 1194, 1594
StyI	CCWWGG	3 cut(s)	487, 1183, 1237
TaaI	ACNGT	4 cut(s)	331, 1398, 1723, 1793
TaiI	ACGT	3 cut(s)	12, 678, 708
TaqI	TCGA	3 cut(s)	399, 462, 1432
TatI	WGTACW	1 cut(s)	653
TauI	GCSGC	3 cut(s)	93, 984, 1151
TfiI	GAWTC	5 cut(s)	464, 532, 757, 807, 1271
Tru1I	TTAA	5 cut(s)	128, 678, 770, 950, 1725
Tru9I	TTAA	5 cut(s)	128, 678, 770, 950, 1725
TseFI	GTSAC	4 cut(s)	16, 52, 724, 1016
TseI	GCWGC	5 cut(s)	1010, 1064, 1537, 1631, 1634
Tsp45I	GTSAC	4 cut(s)	16, 52, 724, 1016
TspDTI	ATGAA	6 cut(s)	17, 489, 524, 1437, 1521, 1562
TspGWI	ACGGA	1 cut(s)	149
Tth111I	GACNNNGTC	1 cut(s)	148
Van91I	CCANNNNNTGG	1 cut(s)	1184
VpaK11BI	GGWCC	3 cut(s)	202, 208, 413
XapI	RAATTY	6 cut(s)	276, 520, 838, 867, 1140, 1265
XbaI	TCTAGA	1 cut(s)	232
XceI	RCATGY	2 cut(s)	968, 1641
XmnI	GAANNNNTTC	1 cut(s)	806
XspI	CTAG	5 cut(s)	233, 641, 828, 1100, 1353

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.