Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0009776

Physical Location & Seq

Genomic Coordinates Forward (+)

17265147 .. 17270599

Gene Structure 5453 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G014380.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1803 bp

ATGAAGTACGTGTTGGTGACGGGTGGTGTTGTTAGTGGACTCGGCAAAGGAGTCACGGCCAGTAGTATTGGATTGCTTCTTCAAGCTTGTGGCCTTCGTGTTACGTCAATCAAAATTGATCCTTACTTGAACACCGATGCTGGGACAATGTCTCCTTTTGAGCATGGGGAAGTGTTCGTATTAGACGATGGCGGTGAGGTTGACCTTGACCTCGGAAATTATGAGCGGTTTCTGGATCTCACTTTGACCCGCGACAACAATATCACAACTGGCAAAATTTATCAGTCTGTTATTGACAAGGAGAGAAAGGGAGACTATCTTGGAAAGACTGTCCAGGTTGTTCCTCACATTACGGATGCCATCCAAGAGTGGATAGAACGTGTGGCAATGGTACCTGTGGATGGGAAAGAAGGTCCAGCTGATGTATGTGTCATCGAATTGGGTGGAACAATAGGGGATATTGAATCAATGCCCTTTATTGAGGCTTGGCCAATTTTCTTATCGTGTCCCGGAAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTGAATGTTGTCGGTGAGCAGAAAACAAAGCCTACACAGCATAGTGTTCGGGTACTTAGAGGACAGGGTTTGACACCTAATATTCTAGCTTGTAGGAGTACAAAGCCACTTGAGGAGAATGTGAAGGCAAAACTTGCTCAATTTTGCCACGTACCGGCAGAAAATATTGTCACTCTTTATGATGTTCCAAACATCTGGCACATCCCATTGCTTTTAAGAGATCAAAAGGCACATGAAGCAATCTTGAAAGAATTAAACCTTCAGAGGGTTGCTAGAGAGCCAAATTTGAAGGAATGGACAACCAGGACAGAAATTTCCTCAAATTTACATGATTCTGTCAGAATTGCAATGGTTGGAAAATACACCGGTCTTTCAGATGCTTACCTCTCTGTTCTAAAGGCTCTTCTACATGCTTCTGTTGCTTGCCGTCGGAAACTTGTTGTAGATTGGGTTGCAGCAGGTGACCTTGAAGATGTTACTGCTAAAGAGGCTCCTGAGGTTCATAAGGCTGCATGGGATCTTTTGAAGGGCGCTGATGGTGTTCTAGTTCCAGGAGGATTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCGGCAAAGTATGCTCGTGAAAACAAAGTTCCATTCCTGGGCATTTGCCTGGGAATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTTGGTATGCTTGATGCTAACAGCACGGAGTTTGATCCTGAAACTACAAGTCCTTGTGTCGTATTTATGCCAGAGGGTTCAAAAACACATATGGGAGGCACTATGCGTCTGGGATCAAGGAGAACCTACTTCACGGTTACTGACTGCAAATCTGCAAAATTGTATGGAGATGTGGCGTTTGTTGATGAACGACATCGACATAGATATGAGGTCAATCCTGATATGATATCGCAATTCGAAATTGCTGGCTTATCATTTGTTGGCAGAGATGAAACTGGTCGGCGCATGGAGATTATTGAGCTGCCTGCCCATCCGTACTTTGTTGGTGTTCAGTTCCATCCCGAATTTAAGTCAAGGCCAGGCAAACCTTCTGCTCTGTTCTTAGGACTAATAGCAGCATGCAGGCGTTCAGATACAATCCTACAAAACAATGGCCATCTGATAAAGCCTGTTGCAAATGGGACTAGTAATGGACACTTCACAGTGAAATCCCACCAGAATGGACATGCATTTAAGTCATCAAATGGGTGTCTAAATGGCGTGTATAGCAATGGTAATGGCGTGCACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

600

Amino Acids

65.61

Weight (kDa)

6.58

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	2 - 270	3.3e-118	CTP synthase N-terminus
GATase	PF00117	308 - 541	1.7e-41	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12670
fragaria_vesca	FvH4_3g13560 FvH4_3g13560
malus_domestica	MD10G1220500.v1.1
prunus_persica	Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1
pyrus_communis	pycom05g21760 pycom10g18630
rosa_chinensis	RchiOBHm_Chr5g0022521
rosa_laevigata	RLG00000032668
rosa_multiflora	Rmu_sc0011329.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056530
rosa_rugosa	Rorug05G0074500 Rorug05G0074600
rosa_samantha	Rh5AG161300 Rh5BG160200 Rh5CG174600 Rh5DG160900
rosa_wichuraiana	Rw0G005550 Rw5G014380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	998
Acc36I	ACCTGC	1 cut(s)	998
Acc65I	GGTACC	1 cut(s)	391
AccB1I	GGYRCC	1 cut(s)	391
AccBSI	CCGCTC	1 cut(s)	226
AccII	CGCG	1 cut(s)	252
AciI	CCGC	4 cut(s)	192, 226, 250, 1142
AclWI	GGATC	5 cut(s)	113, 243, 1074, 1259, 1351
AcoI	YGGCCR	3 cut(s)	57, 488, 1663
AcsI	RAATTY	7 cut(s)	276, 514, 832, 861, 871, 1134, 1574
AcuI	CTGAAG	1 cut(s)	794
AfaI	GTAC	6 cut(s)	8, 393, 603, 649, 702, 1547
AfiI	CCNNNNNNNGG	5 cut(s)	141, 401, 703, 814, 1178
AflIII	ACRYGT	2 cut(s)	9, 379
AgeI	ACCGGT	1 cut(s)	914
AgsI	TTSAA	8 cut(s)	83, 130, 464, 796, 838, 1019, 1075, 1311
AhlI	ACTAGT	1 cut(s)	1694
AjnI	CCWGG	6 cut(s)	333, 851, 1099, 1176, 1188, 1588
AjuI	GAANNNNNNNTTGG	1 cut(s)	28
AluBI	AGCT	4 cut(s)	86, 419, 638, 1531
AluI	AGCT	4 cut(s)	86, 419, 638, 1531
Alw21I	GWGCWC	1 cut(s)	1797
Alw26I	GTCTC	2 cut(s)	156, 306
Alw44I	GTGCAC	1 cut(s)	1793
AlwI	GGATC	5 cut(s)	113, 243, 1074, 1259, 1351
AoxI	GGCC	5 cut(s)	57, 91, 488, 1586, 1663
ApaLI	GTGCAC	1 cut(s)	1793
ApeKI	GCWGC	4 cut(s)	1004, 1058, 1531, 1625
ApoI	RAATTY	7 cut(s)	276, 514, 832, 861, 871, 1134, 1574
AsiGI	ACCGGT	1 cut(s)	914
Asp718I	GGTACC	1 cut(s)	391
AspLEI	GCGC	2 cut(s)	1082, 1515
AspS9I	GGNCC	1 cut(s)	413
AsuC2I	CCSGG	1 cut(s)	510
AsuHPI	GGTGA	5 cut(s)	28, 206, 575, 1022, 1124
AsuII	TTCGAA	1 cut(s)	1467
AvaII	GGWCC	1 cut(s)	413
AxyI	CCTNAGG	1 cut(s)	1044
BaeGI	GKGCMC	1 cut(s)	1797
BalI	TGGCCA	2 cut(s)	490, 1665
BanI	GGYRCC	1 cut(s)	391
BauI	CACGAG	1 cut(s)	1155
Bbv12I	GWGCWC	1 cut(s)	1797
BbvI	GCAGC	4 cut(s)	1016, 1045, 1518, 1637
BccI	CCATC	7 cut(s)	182, 368, 395, 1079, 1548, 1575, 1674
BceAI	ACGGC	2 cut(s)	72, 960
BcgI	CGANNNNNNTGC	2 cut(s)	578, 612
BciT130I	CCWGG	6 cut(s)	335, 853, 1101, 1178, 1190, 1590
BcnI	CCSGG	1 cut(s)	510
BcoDI	GTCTC	2 cut(s)	156, 306
BcuI	ACTAGT	1 cut(s)	1694
BfaI	CTAG	4 cut(s)	635, 822, 1094, 1695
BfoI	RGCGCY	1 cut(s)	1083
BfuAI	ACCTGC	1 cut(s)	998
BisI	GCNGC	5 cut(s)	1005, 1059, 1143, 1532, 1626
BlsI	GCNGC	5 cut(s)	1006, 1060, 1144, 1533, 1627
Bme1390I	CCNGG	7 cut(s)	335, 510, 853, 1101, 1178, 1190, 1590
Bme18I	GGWCC	1 cut(s)	413
BmgT120I	GGNCC	1 cut(s)	413
BmiI	GGNNCC	2 cut(s)	393, 1041
BmrFI	CCNGG	7 cut(s)	335, 510, 853, 1101, 1178, 1190, 1590
BmsI	GCATC	4 cut(s)	127, 346, 916, 1234
Bpu14I	TTCGAA	1 cut(s)	1467
BpuEI	CTTGAG	1 cut(s)	680
BpuMI	CCSGG	1 cut(s)	510
BsaAI	YACGTR	2 cut(s)	10, 700
BsaJI	CCNNGG	3 cut(s)	211, 1177, 1189
BsaWI	WCCGGW	1 cut(s)	914
BsaXI	ACNNNNNCTCC	2 cut(s)	136, 166
Bsc4I	CCNNNNNNNGG	5 cut(s)	141, 401, 703, 814, 1178
Bse118I	RCCGGY	2 cut(s)	703, 914
Bse1I	ACTGG	3 cut(s)	60, 274, 1510
Bse21I	CCTNAGG	1 cut(s)	1044
Bse3DI	GCAATG	4 cut(s)	393, 755, 903, 1786
BseBI	CCWGG	6 cut(s)	335, 853, 1101, 1178, 1190, 1590
BseDI	CCNNGG	3 cut(s)	211, 1177, 1189
BseGI	GGATG	6 cut(s)	360, 361, 406, 750, 1540, 1567
BseLI	CCNNNNNNNGG	5 cut(s)	141, 401, 703, 814, 1178
BseMI	GCAATG	4 cut(s)	393, 755, 903, 1786
BseMII	CTCAG	1 cut(s)	1035
BseNI	ACTGG	3 cut(s)	60, 274, 1510
BseRI	GAGGAG	2 cut(s)	677, 1134
BseSI	GKGCMC	1 cut(s)	1797
BseXI	GCAGC	4 cut(s)	1016, 1045, 1518, 1637
BseYI	CCCAGC	1 cut(s)	140
Bsh1236I	CGCG	1 cut(s)	252
BshFI	GGCC	5 cut(s)	59, 93, 490, 1588, 1665
BshNI	GGYRCC	1 cut(s)	391
BshTI	ACCGGT	1 cut(s)	914
BsiHKAI	GWGCWC	1 cut(s)	1797
BsiSI	CCGG	3 cut(s)	510, 704, 915
BslFI	GGGAC	3 cut(s)	157, 492, 1705
BslI	CCNNNNNNNGG	5 cut(s)	141, 401, 703, 814, 1178
BsmAI	GTCTC	2 cut(s)	156, 306
BsmFI	GGGAC	3 cut(s)	157, 492, 1705
BsmI	GAATGC	1 cut(s)	1200
BsnI	GGCC	5 cut(s)	59, 93, 490, 1588, 1665
Bsp119I	TTCGAA	1 cut(s)	1467
Bsp1286I	GDGCHC	1 cut(s)	1797
Bsp143I	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
BspACI	CCGC	4 cut(s)	192, 226, 250, 1142
BspANI	GGCC	5 cut(s)	59, 93, 490, 1588, 1665
BspCNI	CTCAG	1 cut(s)	1036
BspFNI	CGCG	1 cut(s)	252
BspLI	GGNNCC	2 cut(s)	393, 1041
BspMI	ACCTGC	1 cut(s)	998
BspPI	GGATC	5 cut(s)	113, 243, 1074, 1259, 1351
BspQI	GCTCTTC	1 cut(s)	957
BspT104I	TTCGAA	1 cut(s)	1467
BspT107I	GGYRCC	1 cut(s)	391
BsrBI	CCGCTC	1 cut(s)	226
BsrDI	GCAATG	4 cut(s)	393, 755, 903, 1786
BsrFI	RCCGGY	2 cut(s)	703, 914
BsrI	ACTGG	3 cut(s)	60, 274, 1510
BssAI	RCCGGY	2 cut(s)	703, 914
BssECI	CCNNGG	3 cut(s)	211, 1177, 1189
BssMI	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
BssSI	CACGAG	1 cut(s)	1155
Bst2BI	CACGAG	1 cut(s)	1155
Bst2UI	CCWGG	6 cut(s)	335, 853, 1101, 1178, 1190, 1590
Bst4CI	ACNGT	3 cut(s)	331, 1366, 1714
Bst6I	CTCTTC	1 cut(s)	957
BstAPI	GCANNNNNTGC	2 cut(s)	683, 1151
BstBAI	YACGTR	2 cut(s)	10, 700
BstBI	TTCGAA	1 cut(s)	1467
BstC8I	GCNNGC	6 cut(s)	973, 1477, 1536, 1630, 1634, 1793
BstDEI	CTNAG	3 cut(s)	605, 1044, 1612
BstEII	GGTNACC	1 cut(s)	1010
BstF5I	GGATG	6 cut(s)	360, 361, 406, 750, 1540, 1567
BstFNI	CGCG	1 cut(s)	252
BstH2I	RGCGCY	1 cut(s)	1083
BstHHI	GCGC	2 cut(s)	1082, 1515
BstKTI	GATC	7 cut(s)	121, 238, 772, 1069, 1226, 1267, 1346
BstMAI	GTCTC	2 cut(s)	156, 306
BstMBI	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
BstMWI	GCNNNNNNNGC	7 cut(s)	586, 683, 785, 968, 1037, 1151, 1776
BstNI	CCWGG	6 cut(s)	335, 853, 1101, 1178, 1190, 1590
BstNSI	RCATGY	3 cut(s)	962, 1632, 1739
BstPI	GGTNACC	1 cut(s)	1010
BstSCI	CCNGG	7 cut(s)	333, 508, 851, 1099, 1176, 1188, 1588
BstSLI	GKGCMC	1 cut(s)	1797
BstUI	CGCG	1 cut(s)	252
BstV1I	GCAGC	4 cut(s)	1016, 1045, 1518, 1637
BstX2I	RGATCY	2 cut(s)	235, 1066
BstXI	CCANNNNNNTGG	2 cut(s)	744, 1730
BstYI	RGATCY	2 cut(s)	235, 1066
Bsu36I	CCTNAGG	1 cut(s)	1044
BsuRI	GGCC	5 cut(s)	59, 93, 490, 1588, 1665
BtsCI	GGATG	6 cut(s)	360, 361, 406, 750, 1540, 1567
BtsIMutI	CAGTG	1 cut(s)	1719
BveI	ACCTGC	1 cut(s)	998
Cac8I	GCNNGC	6 cut(s)	973, 1477, 1536, 1630, 1634, 1793
CfoI	GCGC	2 cut(s)	1082, 1515
Cfr10I	RCCGGY	2 cut(s)	703, 914
Cfr13I	GGNCC	1 cut(s)	413
CseI	GACGC	1 cut(s)	1325
Csp6I	GTAC	6 cut(s)	7, 392, 602, 648, 701, 1546
CspAI	ACCGGT	1 cut(s)	914
CviAII	CATG	9 cut(s)	164, 530, 782, 878, 959, 1062, 1516, 1629, 1736
CviQI	GTAC	6 cut(s)	7, 392, 602, 648, 701, 1546
DdeI	CTNAG	3 cut(s)	605, 1044, 1612
DpnI	GATC	7 cut(s)	120, 237, 771, 1068, 1225, 1266, 1345
DpnII	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
EaeI	YGGCCR	3 cut(s)	57, 488, 1663
Eam1104I	CTCTTC	1 cut(s)	957
EarI	CTCTTC	1 cut(s)	957
Eco32I	GATATC	1 cut(s)	1458
Eco47I	GGWCC	1 cut(s)	413
Eco57I	CTGAAG	1 cut(s)	794
Eco81I	CCTNAGG	1 cut(s)	1044
Eco91I	GGTNACC	1 cut(s)	1010
EcoO65I	GGTNACC	1 cut(s)	1010
EcoRII	CCWGG	6 cut(s)	333, 851, 1099, 1176, 1188, 1588
EcoRV	GATATC	1 cut(s)	1458
EcoT22I	ATGCAT	1 cut(s)	1741
FaeI	CATG	9 cut(s)	167, 533, 785, 881, 962, 1065, 1519, 1632, 1739
FaqI	GGGAC	3 cut(s)	157, 492, 1705
FatI	CATG	9 cut(s)	163, 529, 781, 877, 958, 1061, 1515, 1628, 1735
FauI	CCCGC	1 cut(s)	257
FauNDI	CATATG	1 cut(s)	1320
Fnu4HI	GCNGC	5 cut(s)	1005, 1059, 1143, 1532, 1626
FokI	GGATG	6 cut(s)	347, 368, 413, 737, 1527, 1554
Fsp4HI	GCNGC	5 cut(s)	1005, 1059, 1143, 1532, 1626
FspBI	CTAG	4 cut(s)	635, 822, 1094, 1695
GlaI	GCGC	2 cut(s)	1081, 1514
GluI	GCNGC	5 cut(s)	1005, 1059, 1143, 1532, 1626
GsaI	CCCAGC	1 cut(s)	144
HaeII	RGCGCY	1 cut(s)	1083
HaeIII	GGCC	5 cut(s)	59, 93, 490, 1588, 1665
HapII	CCGG	3 cut(s)	510, 704, 915
HgaI	GACGC	1 cut(s)	1325
HhaI	GCGC	2 cut(s)	1082, 1515
Hin1II	CATG	9 cut(s)	167, 533, 785, 881, 962, 1065, 1519, 1632, 1739
Hin6I	GCGC	2 cut(s)	1080, 1513
HinP1I	GCGC	2 cut(s)	1080, 1513
HincII	GTYRAC	1 cut(s)	202
HindII	GTYRAC	1 cut(s)	202
HindIII	AAGCTT	1 cut(s)	84
HinfI	GANTC	4 cut(s)	39, 51, 464, 881
HpaII	CCGG	3 cut(s)	510, 704, 915
HphI	GGTGA	5 cut(s)	28, 206, 575, 1022, 1124
Hpy166II	GTNNAC	3 cut(s)	38, 202, 1795
Hpy188I	TCNGA	8 cut(s)	215, 552, 813, 890, 925, 981, 1642, 1671
Hpy188III	TCNNGA	7 cut(s)	233, 793, 1043, 1157, 1268, 1448, 1571
Hpy8I	GTNNAC	3 cut(s)	38, 202, 1795
Hpy99I	CGWCG	1 cut(s)	981
HpyAV	CCTTC	7 cut(s)	104, 404, 667, 818, 832, 1069, 1608
HpyCH4III	ACNGT	3 cut(s)	331, 1366, 1714
HpyCH4IV	ACGT	4 cut(s)	9, 104, 379, 699
HpyF10VI	GCNNNNNNNGC	7 cut(s)	586, 683, 785, 968, 1037, 1151, 1776
HpyF3I	CTNAG	3 cut(s)	605, 1044, 1612
HpySE526I	ACGT	4 cut(s)	9, 104, 379, 699
Hsp92II	CATG	9 cut(s)	167, 533, 785, 881, 962, 1065, 1519, 1632, 1739
HspAI	GCGC	2 cut(s)	1080, 1513
KpnI	GGTACC	1 cut(s)	395
Kzo9I	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
LguI	GCTCTTC	1 cut(s)	957
LmnI	GCTCC	1 cut(s)	1045
Lsp1109I	GCAGC	4 cut(s)	1016, 1045, 1518, 1637
LweI	GCATC	4 cut(s)	127, 346, 916, 1234
MaeI	CTAG	4 cut(s)	635, 822, 1094, 1695
MaeII	ACGT	4 cut(s)	9, 104, 379, 699
MaeIII	GTNAC	7 cut(s)	16, 52, 100, 718, 1010, 1024, 1366
MalI	GATC	7 cut(s)	120, 237, 771, 1068, 1225, 1266, 1345
MbiI	CCGCTC	1 cut(s)	226
MboI	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
MboII	GAAGA	3 cut(s)	71, 944, 1031
MflI	RGATCY	2 cut(s)	235, 1066
MhlI	GDGCHC	1 cut(s)	1797
MlsI	TGGCCA	2 cut(s)	490, 1665
MluNI	TGGCCA	2 cut(s)	490, 1665
MlyI	GAGTC	2 cut(s)	33, 60
MmeI	TCCRAC	2 cut(s)	883, 959
Mox20I	TGGCCA	2 cut(s)	490, 1665
Mph1103I	ATGCAT	1 cut(s)	1741
MscI	TGGCCA	2 cut(s)	490, 1665
MseI	TTAA	4 cut(s)	764, 803, 1578, 1743
MslI	CAYNNNNRTG	2 cut(s)	1434, 1728
Msp20I	TGGCCA	2 cut(s)	490, 1665
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	3 cut(s)	510, 704, 915
MspR9I	CCNGG	7 cut(s)	335, 510, 853, 1101, 1178, 1190, 1590
Mva1269I	GAATGC	1 cut(s)	1200
MvaI	CCWGG	6 cut(s)	335, 853, 1101, 1178, 1190, 1590
MvnI	CGCG	1 cut(s)	252
MwoI	GCNNNNNNNGC	7 cut(s)	586, 683, 785, 968, 1037, 1151, 1776
NciI	CCSGG	1 cut(s)	510
NdeI	CATATG	1 cut(s)	1320
NdeII	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
NlaIII	CATG	9 cut(s)	167, 533, 785, 881, 962, 1065, 1519, 1632, 1739
NlaIV	GGNNCC	2 cut(s)	393, 1041
NmeAIII	GCCGAG	1 cut(s)	21
NmuCI	GTSAC	4 cut(s)	16, 52, 718, 1010
NsiI	ATGCAT	1 cut(s)	1741
NspI	RCATGY	3 cut(s)	962, 1632, 1739
NspV	TTCGAA	1 cut(s)	1467
PaeI	GCATGC	1 cut(s)	1632
PaqCI	CACCTGC	1 cut(s)	998
PciSI	GCTCTTC	1 cut(s)	957
PcsI	WCGNNNNNNNCGW	1 cut(s)	183
PctI	GAATGC	1 cut(s)	1200
PfeI	GAWTC	2 cut(s)	464, 881
PflFI	GACNNNGTC	1 cut(s)	148
PfoI	TCCNGGA	2 cut(s)	508, 1099
PinAI	ACCGGT	1 cut(s)	914
PkrI	GCNGC	5 cut(s)	1006, 1060, 1144, 1533, 1627
PleI	GAGTC	2 cut(s)	33, 59
PpsI	GAGTC	2 cut(s)	33, 59
Ppu21I	YACGTR	2 cut(s)	10, 700
Psp6I	CCWGG	6 cut(s)	333, 851, 1099, 1176, 1188, 1588
PspEI	GGTNACC	1 cut(s)	1010
PspFI	CCCAGC	1 cut(s)	140
PspGI	CCWGG	6 cut(s)	333, 851, 1099, 1176, 1188, 1588
PspN4I	GGNNCC	2 cut(s)	393, 1041
PspPI	GGNCC	1 cut(s)	413
PsuI	RGATCY	2 cut(s)	235, 1066
PsyI	GACNNNGTC	1 cut(s)	148
PvuII	CAGCTG	1 cut(s)	419
RsaI	GTAC	6 cut(s)	8, 393, 603, 649, 702, 1547
RsaNI	GTAC	6 cut(s)	7, 392, 602, 648, 701, 1546
RseI	CAYNNNNRTG	2 cut(s)	1434, 1728
SapI	GCTCTTC	1 cut(s)	957
SaqAI	TTAA	4 cut(s)	764, 803, 1578, 1743
SatI	GCNGC	5 cut(s)	1005, 1059, 1143, 1532, 1626
Sau3AI	GATC	7 cut(s)	118, 235, 769, 1066, 1223, 1264, 1343
Sau96I	GGNCC	1 cut(s)	413
SchI	GAGTC	2 cut(s)	33, 60
ScrFI	CCNGG	7 cut(s)	335, 510, 853, 1101, 1178, 1190, 1590
SduI	GDGCHC	1 cut(s)	1797
SfaNI	GCATC	4 cut(s)	127, 346, 916, 1234
SfuI	TTCGAA	1 cut(s)	1467
SinI	GGWCC	1 cut(s)	413
SmiMI	CAYNNNNRTG	2 cut(s)	1434, 1728
SmlI	CTYRAG	1 cut(s)	659
SmoI	CTYRAG	1 cut(s)	659
SpeI	ACTAGT	1 cut(s)	1694
SphI	GCATGC	1 cut(s)	1632
SsiI	CCGC	4 cut(s)	192, 226, 250, 1142
SspI	AATATT	2 cut(s)	631, 715
SspMI	CTAG	4 cut(s)	635, 822, 1094, 1695
StyD4I	CCNGG	7 cut(s)	333, 508, 851, 1099, 1176, 1188, 1588
TaaI	ACNGT	3 cut(s)	331, 1366, 1714
TaiI	ACGT	4 cut(s)	12, 107, 382, 702
TaqI	TCGA	3 cut(s)	435, 1426, 1467
TatI	WGTACW	1 cut(s)	647
TauI	GCSGC	1 cut(s)	1145
TfiI	GAWTC	2 cut(s)	464, 881
Tru1I	TTAA	4 cut(s)	764, 803, 1578, 1743
Tru9I	TTAA	4 cut(s)	764, 803, 1578, 1743
TscAI	CASTG	1 cut(s)	1719
TseFI	GTSAC	4 cut(s)	16, 52, 718, 1010
TseI	GCWGC	4 cut(s)	1004, 1058, 1531, 1625
Tsp45I	GTSAC	4 cut(s)	16, 52, 718, 1010
TspDTI	ATGAA	6 cut(s)	17, 518, 798, 1040, 1431, 1515
TspGWI	ACGGA	3 cut(s)	368, 1271, 1533
TspRI	CASTG	1 cut(s)	1719
Tth111I	GACNNNGTC	1 cut(s)	148
VneI	GTGCAC	1 cut(s)	1793
VpaK11BI	GGWCC	1 cut(s)	413
XapI	RAATTY	7 cut(s)	276, 514, 832, 861, 871, 1134, 1574
XceI	RCATGY	3 cut(s)	962, 1632, 1739
XspI	CTAG	4 cut(s)	635, 822, 1094, 1695
Zsp2I	ATGCAT	1 cut(s)	1741

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.