Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5D

Orthogroup ID

OG0009776

Physical Location & Seq

Genomic Coordinates Forward (+)

16660066 .. 16666812

Gene Structure 6747 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5DG160900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1716 bp

ATGCTCAAATTTATCATGCCCGCAGATCCTTACTTGAACACCGATGCTGGGACAATGTCTCCTTTTGAGCATGGGGAAGTGTTCGTATTAGACGATGGCGGTGAGGTTGACCTTGACCTCGGAAATTATGAGCGGTTTCTGGATCTCACTTTGACCCGTGACAACAATATCACAACTGGCAAAATTTATCAGTCTGTTATTGACAAGGAGAGAAAGGGAGACTATCTTGGAAAGACTGTCCAGGTTGTTCCTCACATTACGGATGCCATCCAAGAGTGGATAGAACGTGTGGCAATGGTACCTGTGGACGGGAAAGAAGGTCCAGCTGATGTATGTGTCATCGAATTGGGTGGAACTATAGGGGATATTGAATCAATGCCCTTTATTGAGGCCCTTGGCCAATTTTCTTATCGTGTTGGTCCCGGAAATTTCTGCTTGGTTCATGTCAGCCTTGTGCCTGTTCTGAATGTTGTCGGTGAGCAGAAAACAAAGCCTACACAGCATAGTGTTCGGGTACTTAGAGGACAGGGTTTGACACCTAATATTCTAGCTTGTAGGAGTACAAAGCCACTTGAGGAGAATGTGAAGGCAAAACTTGCTCAATTTTGCCACGTACCGGCAGAAAATATTGTCACTCTTTATGATGTTCCAAACATCTGGCACATCCCATTGCTTTTAAGAGATCAAAAGGCACATGAAGCAATCTTGAAAGAATTAAACCTTCAGAGGGTTTCTAGAGAGCCAAATTTGAAGGAATGGACAACCAGGACAGAAATTTCCTCAAATTTACATGATTCTGTCAGAATTGCAATGGTTGGAAAATACACCGGTCTTTCAGATGCTTACCTCTCTGTTCTAAAGGCTCTTCTACATGCTTCTGTTGCTTGCCGTCGGAAACTTGTTGTAGATTGGGTTGCAGCAGGTGACCTTGAAGATGTTACTGCTAAAGAGGCTCCTGAGGTTCATAAGGCTGCATGGGATCTTTTGAAGGGCGCTGATGGTGTTCTAGTTCCAGGAGGATTTGGTGATAGAGGAGTGCAAGGGAAAATTCTTGCGGCAAAGTATGCTCGTGAAAACAAAGTTCCATTCCTGGGCATTTGCCTGGGAATGCAAATTGCTGTTATTGAGTTTGCACGATCTGTTCTTGGTATGCTTGATGCTAACAGCACGGAGTTTGATCCTAAAACTACAAGTCCTTGTGTCGTATTTATGCCAGAGGGTTCAAAAACACATATGGGAGGCACTATGCGTCTGGGATCAAGGAGGACCTACTTCACGGTTACTGACTGCAAATCTGCAAAATTGTATGGAGATGTGGCGTTTGTTGATGAACGACATCGACATAGATATGAGGTCAATCCTGATATGATATCGCAATTCGAAATTGCTGGCTTATCATTTGTTGGCAGAGATGAAACTGGTCGGCGCATGGAGATTATTGAGCTGCCTGCCCATCCGTACTTTGTTGGTGTTCAGTTCCATCCCGAATTTAAGTCAAGGCCAGGCAAACCTTCTGCTCTGTTCTTAGGACTAATAGCAGCATGCAGGCGTTCAGATACAATCCTACAAAACAATGGCCATCTGATAAAGCCTGTTGCAAATGGGACTAGTAATGGACACTTCACAGTGAAATCCCACCAGAATGGACATGCATTTAAGTCATCAAATGGGTGTCTAAATGGCGTGTATAGCAATGGTAATGGCGTGCACTTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0003883 GO:0006139 GO:0006206 GO:0006213 GO:0006220 GO:0006221 GO:0006241 GO:0006629 GO:0006644 GO:0006725 GO:0006753 GO:0006793 GO:0006796 GO:0006807 GO:0008150 GO:0008152 GO:0008610 GO:0008654 GO:0009058 GO:0009112 GO:0009116 GO:0009117 GO:0009119 GO:0009141 GO:0009142 GO:0009147 GO:0009148 GO:0009163 GO:0009165 GO:0009199 GO:0009201 GO:0009208 GO:0009209 GO:0009218 GO:0009220 GO:0009259 GO:0009260 GO:0009987 GO:0016874 GO:0016879 GO:0018130 GO:0019438 GO:0019637 GO:0019693 GO:0019856 GO:0034404 GO:0034641 GO:0034654 GO:0042455 GO:0044237 GO:0044238 GO:0044249 GO:0044255 GO:0044271 GO:0044281 GO:0044283 GO:0046036 GO:0046112 GO:0046131 GO:0046132 GO:0046134 GO:0046390 GO:0046483 GO:0055086 GO:0071704 GO:0072527 GO:0072528 GO:0090407 GO:1901135 GO:1901137 GO:1901293 GO:1901360 GO:1901362 GO:1901564 GO:1901566 GO:1901576 GO:1901657 GO:1901659

KEGG Pathways

Metabolic & Signaling

ko00240 ko01100 map00240 map01100

Pfam Domains

Protein Families

CTP_synth_N GATase

Protein Analysis

571

Amino Acids

62.85

Weight (kDa)

6.58

Isoelectric Point (pI)

38.97

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CTP_synth_N	PF06418	7 - 241	1.2e-101	CTP synthase N-terminus
GATase	PF00117	279 - 512	1.4e-41	Glutamine amidotransferase class-I

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0009776)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G12670
fragaria_vesca	FvH4_3g13560 FvH4_3g13560
malus_domestica	MD10G1220500.v1.1
prunus_persica	Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1 Prupe.4G123800_v2.0.a1
pyrus_communis	pycom05g21760 pycom10g18630
rosa_chinensis	RchiOBHm_Chr5g0022521
rosa_laevigata	RLG00000032668
rosa_multiflora	Rmu_sc0011329.1_g000002
rosa_roxburghii	Rroxscaffold_1G00056530
rosa_rugosa	Rorug05G0074500 Rorug05G0074600
rosa_samantha	Rh5AG161300 Rh5BG160200 Rh5CG174600 Rh5DG160900
rosa_wichuraiana	Rw0G005550 Rw5G014380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	911
Acc36I	ACCTGC	1 cut(s)	911
Acc65I	GGTACC	1 cut(s)	298
AccB1I	GGYRCC	1 cut(s)	298
AccBSI	CCGCTC	1 cut(s)	133
AciI	CCGC	4 cut(s)	21, 99, 133, 1055
AclWI	GGATC	5 cut(s)	20, 150, 987, 1172, 1264
AcoI	YGGCCR	2 cut(s)	397, 1576
AcsI	RAATTY	8 cut(s)	8, 183, 427, 745, 774, 784, 1047, 1487
AcuI	CTGAAG	1 cut(s)	707
AfaI	GTAC	5 cut(s)	300, 516, 562, 615, 1460
AfiI	CCNNNNNNNGG	5 cut(s)	48, 308, 616, 727, 1091
AflIII	ACRYGT	1 cut(s)	286
AgeI	ACCGGT	1 cut(s)	827
AgsI	TTSAA	7 cut(s)	37, 371, 709, 751, 932, 988, 1224
AhlI	ACTAGT	1 cut(s)	1607
AjnI	CCWGG	6 cut(s)	240, 764, 1012, 1089, 1101, 1501
AluBI	AGCT	3 cut(s)	326, 551, 1444
AluI	AGCT	3 cut(s)	326, 551, 1444
Alw21I	GWGCWC	1 cut(s)	1710
Alw26I	GTCTC	2 cut(s)	63, 213
Alw44I	GTGCAC	1 cut(s)	1706
AlwI	GGATC	5 cut(s)	20, 150, 987, 1172, 1264
AoxI	GGCC	4 cut(s)	390, 397, 1499, 1576
ApaLI	GTGCAC	1 cut(s)	1706
ApeKI	GCWGC	4 cut(s)	917, 971, 1444, 1538
ApoI	RAATTY	8 cut(s)	8, 183, 427, 745, 774, 784, 1047, 1487
AsiGI	ACCGGT	1 cut(s)	827
Asp718I	GGTACC	1 cut(s)	298
AspLEI	GCGC	2 cut(s)	995, 1428
AspS9I	GGNCC	4 cut(s)	320, 391, 419, 1266
AsuC2I	CCSGG	1 cut(s)	423
AsuHPI	GGTGA	4 cut(s)	113, 488, 935, 1037
AsuII	TTCGAA	1 cut(s)	1380
AvaII	GGWCC	3 cut(s)	320, 419, 1266
AxyI	CCTNAGG	1 cut(s)	957
BaeGI	GKGCMC	1 cut(s)	1710
BalI	TGGCCA	2 cut(s)	399, 1578
BanI	GGYRCC	1 cut(s)	298
BauI	CACGAG	1 cut(s)	1068
Bbv12I	GWGCWC	1 cut(s)	1710
BbvI	GCAGC	4 cut(s)	929, 958, 1431, 1550
BccI	CCATC	6 cut(s)	89, 275, 992, 1461, 1488, 1587
BceAI	ACGGC	1 cut(s)	873
BcgI	CGANNNNNNTGC	2 cut(s)	491, 525
BciT130I	CCWGG	6 cut(s)	242, 766, 1014, 1091, 1103, 1503
BcnI	CCSGG	1 cut(s)	423
BcoDI	GTCTC	2 cut(s)	63, 213
BcuI	ACTAGT	1 cut(s)	1607
BfaI	CTAG	4 cut(s)	548, 735, 1007, 1608
BfmI	CTRYAG	1 cut(s)	357
BfoI	RGCGCY	1 cut(s)	996
BfuAI	ACCTGC	1 cut(s)	911
BisI	GCNGC	5 cut(s)	918, 972, 1056, 1445, 1539
BlsI	GCNGC	5 cut(s)	919, 973, 1057, 1446, 1540
Bme1390I	CCNGG	7 cut(s)	242, 423, 766, 1014, 1091, 1103, 1503
Bme18I	GGWCC	3 cut(s)	320, 419, 1266
BmgT120I	GGNCC	4 cut(s)	320, 391, 419, 1266
BmiI	GGNNCC	3 cut(s)	300, 421, 954
BmrFI	CCNGG	7 cut(s)	242, 423, 766, 1014, 1091, 1103, 1503
BmsI	GCATC	4 cut(s)	34, 253, 829, 1147
Bpu14I	TTCGAA	1 cut(s)	1380
BpuEI	CTTGAG	1 cut(s)	593
BpuMI	CCSGG	1 cut(s)	423
BsaAI	YACGTR	1 cut(s)	613
BsaJI	CCNNGG	4 cut(s)	118, 394, 1090, 1102
BsaWI	WCCGGW	1 cut(s)	827
BsaXI	ACNNNNNCTCC	2 cut(s)	43, 73
Bsc4I	CCNNNNNNNGG	5 cut(s)	48, 308, 616, 727, 1091
Bse118I	RCCGGY	2 cut(s)	616, 827
Bse1I	ACTGG	2 cut(s)	181, 1423
Bse21I	CCTNAGG	1 cut(s)	957
Bse3DI	GCAATG	4 cut(s)	300, 668, 816, 1699
BseBI	CCWGG	6 cut(s)	242, 766, 1014, 1091, 1103, 1503
BseDI	CCNNGG	4 cut(s)	118, 394, 1090, 1102
BseGI	GGATG	5 cut(s)	267, 268, 663, 1453, 1480
BseLI	CCNNNNNNNGG	5 cut(s)	48, 308, 616, 727, 1091
BseMI	GCAATG	4 cut(s)	300, 668, 816, 1699
BseMII	CTCAG	1 cut(s)	948
BseNI	ACTGG	2 cut(s)	181, 1423
BseRI	GAGGAG	2 cut(s)	590, 1047
BseSI	GKGCMC	1 cut(s)	1710
BseXI	GCAGC	4 cut(s)	929, 958, 1431, 1550
BseYI	CCCAGC	1 cut(s)	47
BshFI	GGCC	4 cut(s)	392, 399, 1501, 1578
BshNI	GGYRCC	1 cut(s)	298
BshTI	ACCGGT	1 cut(s)	827
BsiHKAI	GWGCWC	1 cut(s)	1710
BsiSI	CCGG	3 cut(s)	423, 617, 828
BslFI	GGGAC	3 cut(s)	64, 405, 1618
BslI	CCNNNNNNNGG	5 cut(s)	48, 308, 616, 727, 1091
BsmAI	GTCTC	2 cut(s)	63, 213
BsmFI	GGGAC	3 cut(s)	64, 405, 1618
BsmI	GAATGC	1 cut(s)	1113
BsnI	GGCC	4 cut(s)	392, 399, 1501, 1578
Bsp119I	TTCGAA	1 cut(s)	1380
Bsp1286I	GDGCHC	1 cut(s)	1710
Bsp143I	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
BspACI	CCGC	4 cut(s)	21, 99, 133, 1055
BspANI	GGCC	4 cut(s)	392, 399, 1501, 1578
BspCNI	CTCAG	1 cut(s)	949
BspLI	GGNNCC	3 cut(s)	300, 421, 954
BspMI	ACCTGC	1 cut(s)	911
BspPI	GGATC	5 cut(s)	20, 150, 987, 1172, 1264
BspQI	GCTCTTC	1 cut(s)	870
BspT104I	TTCGAA	1 cut(s)	1380
BspT107I	GGYRCC	1 cut(s)	298
BsrBI	CCGCTC	1 cut(s)	133
BsrDI	GCAATG	4 cut(s)	300, 668, 816, 1699
BsrFI	RCCGGY	2 cut(s)	616, 827
BsrI	ACTGG	2 cut(s)	181, 1423
BssAI	RCCGGY	2 cut(s)	616, 827
BssECI	CCNNGG	4 cut(s)	118, 394, 1090, 1102
BssMI	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
BssSI	CACGAG	1 cut(s)	1068
BssT1I	CCWWGG	1 cut(s)	394
Bst2BI	CACGAG	1 cut(s)	1068
Bst2UI	CCWGG	6 cut(s)	242, 766, 1014, 1091, 1103, 1503
Bst4CI	ACNGT	3 cut(s)	238, 1279, 1627
Bst6I	CTCTTC	1 cut(s)	870
BstAPI	GCANNNNNTGC	2 cut(s)	596, 1064
BstBAI	YACGTR	1 cut(s)	613
BstBI	TTCGAA	1 cut(s)	1380
BstC8I	GCNNGC	7 cut(s)	21, 886, 1390, 1449, 1543, 1547, 1706
BstDEI	CTNAG	3 cut(s)	518, 957, 1525
BstEII	GGTNACC	1 cut(s)	923
BstF5I	GGATG	5 cut(s)	267, 268, 663, 1453, 1480
BstH2I	RGCGCY	1 cut(s)	996
BstHHI	GCGC	2 cut(s)	995, 1428
BstKTI	GATC	7 cut(s)	28, 145, 685, 982, 1139, 1180, 1259
BstMAI	GTCTC	2 cut(s)	63, 213
BstMBI	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
BstMWI	GCNNNNNNNGC	7 cut(s)	499, 596, 698, 881, 950, 1064, 1689
BstNI	CCWGG	6 cut(s)	242, 766, 1014, 1091, 1103, 1503
BstNSI	RCATGY	3 cut(s)	875, 1545, 1652
BstPI	GGTNACC	1 cut(s)	923
BstSCI	CCNGG	7 cut(s)	240, 421, 764, 1012, 1089, 1101, 1501
BstSFI	CTRYAG	1 cut(s)	357
BstSLI	GKGCMC	1 cut(s)	1710
BstV1I	GCAGC	4 cut(s)	929, 958, 1431, 1550
BstX2I	RGATCY	3 cut(s)	25, 142, 979
BstXI	CCANNNNNNTGG	2 cut(s)	657, 1643
BstYI	RGATCY	3 cut(s)	25, 142, 979
Bsu36I	CCTNAGG	1 cut(s)	957
BsuRI	GGCC	4 cut(s)	392, 399, 1501, 1578
BtsCI	GGATG	5 cut(s)	267, 268, 663, 1453, 1480
BtsIMutI	CAGTG	1 cut(s)	1632
BveI	ACCTGC	1 cut(s)	911
Cac8I	GCNNGC	7 cut(s)	21, 886, 1390, 1449, 1543, 1547, 1706
CfoI	GCGC	2 cut(s)	995, 1428
Cfr10I	RCCGGY	2 cut(s)	616, 827
Cfr13I	GGNCC	4 cut(s)	320, 391, 419, 1266
CseI	GACGC	1 cut(s)	1238
Csp6I	GTAC	5 cut(s)	299, 515, 561, 614, 1459
CspAI	ACCGGT	1 cut(s)	827
CviQI	GTAC	5 cut(s)	299, 515, 561, 614, 1459
DdeI	CTNAG	3 cut(s)	518, 957, 1525
DpnI	GATC	7 cut(s)	27, 144, 684, 981, 1138, 1179, 1258
DpnII	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
EaeI	YGGCCR	2 cut(s)	397, 1576
Eam1104I	CTCTTC	1 cut(s)	870
EarI	CTCTTC	1 cut(s)	870
Eco130I	CCWWGG	1 cut(s)	394
Eco32I	GATATC	1 cut(s)	1371
Eco47I	GGWCC	3 cut(s)	320, 419, 1266
Eco57I	CTGAAG	1 cut(s)	707
Eco81I	CCTNAGG	1 cut(s)	957
Eco91I	GGTNACC	1 cut(s)	923
EcoO109I	RGGNCCY	2 cut(s)	391, 1266
EcoO65I	GGTNACC	1 cut(s)	923
EcoRII	CCWGG	6 cut(s)	240, 764, 1012, 1089, 1101, 1501
EcoRV	GATATC	1 cut(s)	1371
EcoT14I	CCWWGG	1 cut(s)	394
EcoT22I	ATGCAT	1 cut(s)	1654
ErhI	CCWWGG	1 cut(s)	394
FaqI	GGGAC	3 cut(s)	64, 405, 1618
FauI	CCCGC	1 cut(s)	28
FauNDI	CATATG	1 cut(s)	1233
Fnu4HI	GCNGC	5 cut(s)	918, 972, 1056, 1445, 1539
FokI	GGATG	5 cut(s)	254, 275, 650, 1440, 1467
Fsp4HI	GCNGC	5 cut(s)	918, 972, 1056, 1445, 1539
FspBI	CTAG	4 cut(s)	548, 735, 1007, 1608
GlaI	GCGC	2 cut(s)	994, 1427
GluI	GCNGC	5 cut(s)	918, 972, 1056, 1445, 1539
GsaI	CCCAGC	1 cut(s)	51
HaeII	RGCGCY	1 cut(s)	996
HaeIII	GGCC	4 cut(s)	392, 399, 1501, 1578
HapII	CCGG	3 cut(s)	423, 617, 828
HgaI	GACGC	1 cut(s)	1238
HhaI	GCGC	2 cut(s)	995, 1428
Hin6I	GCGC	2 cut(s)	993, 1426
HinP1I	GCGC	2 cut(s)	993, 1426
HincII	GTYRAC	1 cut(s)	109
HindII	GTYRAC	1 cut(s)	109
HinfI	GANTC	2 cut(s)	371, 794
HpaII	CCGG	3 cut(s)	423, 617, 828
HphI	GGTGA	4 cut(s)	113, 488, 935, 1037
Hpy166II	GTNNAC	3 cut(s)	109, 307, 1708
Hpy188I	TCNGA	8 cut(s)	122, 465, 726, 803, 838, 894, 1555, 1584
Hpy188III	TCNNGA	7 cut(s)	140, 706, 735, 956, 1070, 1361, 1484
Hpy8I	GTNNAC	3 cut(s)	109, 307, 1708
Hpy99I	CGWCG	1 cut(s)	894
HpyAV	CCTTC	6 cut(s)	311, 580, 731, 745, 982, 1521
HpyCH4III	ACNGT	3 cut(s)	238, 1279, 1627
HpyCH4IV	ACGT	2 cut(s)	286, 612
HpyF10VI	GCNNNNNNNGC	7 cut(s)	499, 596, 698, 881, 950, 1064, 1689
HpyF3I	CTNAG	3 cut(s)	518, 957, 1525
HpySE526I	ACGT	2 cut(s)	286, 612
HspAI	GCGC	2 cut(s)	993, 1426
KpnI	GGTACC	1 cut(s)	302
Kzo9I	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
LguI	GCTCTTC	1 cut(s)	870
LmnI	GCTCC	1 cut(s)	958
Lsp1109I	GCAGC	4 cut(s)	929, 958, 1431, 1550
LweI	GCATC	4 cut(s)	34, 253, 829, 1147
MaeI	CTAG	4 cut(s)	548, 735, 1007, 1608
MaeII	ACGT	2 cut(s)	286, 612
MaeIII	GTNAC	5 cut(s)	158, 631, 923, 937, 1279
MalI	GATC	7 cut(s)	27, 144, 684, 981, 1138, 1179, 1258
MbiI	CCGCTC	1 cut(s)	133
MboI	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
MboII	GAAGA	2 cut(s)	857, 944
MflI	RGATCY	3 cut(s)	25, 142, 979
MhlI	GDGCHC	1 cut(s)	1710
MlsI	TGGCCA	2 cut(s)	399, 1578
MluNI	TGGCCA	2 cut(s)	399, 1578
MmeI	TCCRAC	2 cut(s)	796, 872
Mox20I	TGGCCA	2 cut(s)	399, 1578
Mph1103I	ATGCAT	1 cut(s)	1654
MscI	TGGCCA	2 cut(s)	399, 1578
MseI	TTAA	4 cut(s)	677, 716, 1491, 1656
MslI	CAYNNNNRTG	2 cut(s)	1347, 1641
Msp20I	TGGCCA	2 cut(s)	399, 1578
MspA1I	CMGCKG	1 cut(s)	326
MspI	CCGG	3 cut(s)	423, 617, 828
MspR9I	CCNGG	7 cut(s)	242, 423, 766, 1014, 1091, 1103, 1503
Mva1269I	GAATGC	1 cut(s)	1113
MvaI	CCWGG	6 cut(s)	242, 766, 1014, 1091, 1103, 1503
MwoI	GCNNNNNNNGC	7 cut(s)	499, 596, 698, 881, 950, 1064, 1689
NciI	CCSGG	1 cut(s)	423
NdeI	CATATG	1 cut(s)	1233
NdeII	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
NlaIV	GGNNCC	3 cut(s)	300, 421, 954
NmuCI	GTSAC	3 cut(s)	158, 631, 923
NsiI	ATGCAT	1 cut(s)	1654
NspI	RCATGY	3 cut(s)	875, 1545, 1652
NspV	TTCGAA	1 cut(s)	1380
PaeI	GCATGC	1 cut(s)	1545
PaqCI	CACCTGC	1 cut(s)	911
PciSI	GCTCTTC	1 cut(s)	870
PcsI	WCGNNNNNNNCGW	1 cut(s)	90
PctI	GAATGC	1 cut(s)	1113
PfeI	GAWTC	2 cut(s)	371, 794
PflFI	GACNNNGTC	1 cut(s)	55
PfoI	TCCNGGA	2 cut(s)	421, 1012
PinAI	ACCGGT	1 cut(s)	827
PkrI	GCNGC	5 cut(s)	919, 973, 1057, 1446, 1540
Ppu21I	YACGTR	1 cut(s)	613
PpuMI	RGGWCCY	1 cut(s)	1266
Psp5II	RGGWCCY	1 cut(s)	1266
Psp6I	CCWGG	6 cut(s)	240, 764, 1012, 1089, 1101, 1501
PspEI	GGTNACC	1 cut(s)	923
PspFI	CCCAGC	1 cut(s)	47
PspGI	CCWGG	6 cut(s)	240, 764, 1012, 1089, 1101, 1501
PspN4I	GGNNCC	3 cut(s)	300, 421, 954
PspPI	GGNCC	4 cut(s)	320, 391, 419, 1266
PspPPI	RGGWCCY	1 cut(s)	1266
PsuI	RGATCY	3 cut(s)	25, 142, 979
PsyI	GACNNNGTC	1 cut(s)	55
PvuII	CAGCTG	1 cut(s)	326
RsaI	GTAC	5 cut(s)	300, 516, 562, 615, 1460
RsaNI	GTAC	5 cut(s)	299, 515, 561, 614, 1459
RseI	CAYNNNNRTG	2 cut(s)	1347, 1641
SapI	GCTCTTC	1 cut(s)	870
SaqAI	TTAA	4 cut(s)	677, 716, 1491, 1656
SatI	GCNGC	5 cut(s)	918, 972, 1056, 1445, 1539
Sau3AI	GATC	7 cut(s)	25, 142, 682, 979, 1136, 1177, 1256
Sau96I	GGNCC	4 cut(s)	320, 391, 419, 1266
ScrFI	CCNGG	7 cut(s)	242, 423, 766, 1014, 1091, 1103, 1503
SduI	GDGCHC	1 cut(s)	1710
SfaNI	GCATC	4 cut(s)	34, 253, 829, 1147
SfcI	CTRYAG	1 cut(s)	357
SfuI	TTCGAA	1 cut(s)	1380
SinI	GGWCC	3 cut(s)	320, 419, 1266
SmiMI	CAYNNNNRTG	2 cut(s)	1347, 1641
SmlI	CTYRAG	1 cut(s)	572
SmoI	CTYRAG	1 cut(s)	572
SpeI	ACTAGT	1 cut(s)	1607
SphI	GCATGC	1 cut(s)	1545
SsiI	CCGC	4 cut(s)	21, 99, 133, 1055
SspI	AATATT	2 cut(s)	544, 628
SspMI	CTAG	4 cut(s)	548, 735, 1007, 1608
StyD4I	CCNGG	7 cut(s)	240, 421, 764, 1012, 1089, 1101, 1501
StyI	CCWWGG	1 cut(s)	394
TaaI	ACNGT	3 cut(s)	238, 1279, 1627
TaiI	ACGT	2 cut(s)	289, 615
TaqI	TCGA	3 cut(s)	342, 1339, 1380
TatI	WGTACW	1 cut(s)	560
TauI	GCSGC	1 cut(s)	1058
TfiI	GAWTC	2 cut(s)	371, 794
Tru1I	TTAA	4 cut(s)	677, 716, 1491, 1656
Tru9I	TTAA	4 cut(s)	677, 716, 1491, 1656
TscAI	CASTG	1 cut(s)	1632
TseFI	GTSAC	3 cut(s)	158, 631, 923
TseI	GCWGC	4 cut(s)	917, 971, 1444, 1538
Tsp45I	GTSAC	3 cut(s)	158, 631, 923
TspDTI	ATGAA	5 cut(s)	431, 711, 953, 1344, 1428
TspGWI	ACGGA	3 cut(s)	275, 1184, 1446
TspRI	CASTG	1 cut(s)	1632
Tth111I	GACNNNGTC	1 cut(s)	55
VneI	GTGCAC	1 cut(s)	1706
VpaK11BI	GGWCC	3 cut(s)	320, 419, 1266
XapI	RAATTY	8 cut(s)	8, 183, 427, 745, 774, 784, 1047, 1487
XbaI	TCTAGA	1 cut(s)	734
XceI	RCATGY	3 cut(s)	875, 1545, 1652
XspI	CTAG	4 cut(s)	548, 735, 1007, 1608
Zsp2I	ATGCAT	1 cut(s)	1654

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.